AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene024420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene024420.t1 MTR_4g122850 66.452 155 46 5 1 151 223 375 1.74e-59 191
MS.gene024420.t1 MTR_4g094365 55.245 143 61 2 1 141 222 363 5.11e-46 155
MS.gene024420.t1 MTR_3g103020 56.643 143 58 2 1 141 237 377 2.53e-42 146
MS.gene024420.t1 MTR_4g116320 54.348 138 59 2 3 138 119 254 1.01e-41 142
MS.gene024420.t1 MTR_4g116330 52.482 141 65 1 3 141 239 379 1.99e-40 141
MS.gene024420.t1 MTR_8g433040 56.028 141 59 2 1 141 226 363 7.03e-40 140
MS.gene024420.t1 MTR_8g032380 56.028 141 59 2 1 141 226 363 7.03e-40 140
MS.gene024420.t1 MTR_4g109270 51.799 139 67 0 3 141 225 363 3.74e-39 138
MS.gene024420.t1 MTR_3g034180 53.191 141 63 2 1 141 351 488 4.64e-39 140
MS.gene024420.t1 MTR_6g060650 50.000 142 69 1 1 142 234 373 1.61e-38 136
MS.gene024420.t1 MTR_5g097210 48.993 149 73 2 3 151 227 372 1.91e-38 136
MS.gene024420.t1 MTR_4g109280 51.748 143 64 3 1 141 219 358 3.36e-38 135
MS.gene024420.t1 MTR_1g055175 47.183 142 70 4 2 141 62 200 2.86e-37 129
MS.gene024420.t1 MTR_8g433030 53.676 136 59 3 3 137 205 337 3.04e-37 132
MS.gene024420.t1 MTR_1g055195 50.676 148 65 4 3 146 341 484 5.52e-37 134
MS.gene024420.t1 MTR_8g032390 53.676 136 59 3 3 137 238 370 8.85e-37 132
MS.gene024420.t1 MTR_4g117720 52.055 146 60 5 3 141 235 377 9.07e-37 132
MS.gene024420.t1 MTR_8g040935 46.809 141 73 1 3 141 67 207 1.41e-36 127
MS.gene024420.t1 MTR_1g055165 47.183 142 70 4 2 141 179 317 7.49e-36 128
MS.gene024420.t1 MTR_6g463430 50.000 144 62 3 1 141 65 201 1.28e-35 124
MS.gene024420.t1 MTR_4g023080 53.521 142 59 4 3 142 218 354 4.23e-35 127
MS.gene024420.t1 MTR_4g023070 48.701 154 60 4 3 141 220 369 6.33e-35 127
MS.gene024420.t1 MTR_4g023130 52.113 142 61 4 3 142 177 313 4.93e-34 123
MS.gene024420.t1 MTR_4g023150 54.483 145 54 7 3 140 219 358 1.14e-33 123
MS.gene024420.t1 MTR_4g021785 50.360 139 66 2 3 141 219 354 5.34e-33 121
MS.gene024420.t1 MTR_4g122860 46.259 147 72 3 19 161 196 339 7.75e-33 120
MS.gene024420.t1 MTR_4g118360 48.092 131 56 5 17 141 1 125 1.39e-32 114
MS.gene024420.t1 MTR_4g023380 46.667 165 58 7 3 141 218 378 1.52e-32 120
MS.gene024420.t1 MTR_4g023090 47.020 151 60 5 3 137 233 379 1.66e-32 120
MS.gene024420.t1 MTR_4g023190 52.414 145 57 7 3 140 218 357 2.47e-32 120
MS.gene024420.t1 MTR_4g117870 50.000 128 62 2 14 141 141 266 3.68e-32 117
MS.gene024420.t1 MTR_4g023120 46.104 154 64 4 3 141 220 369 6.68e-32 119
MS.gene024420.t1 MTR_3g034130 50.000 122 59 1 1 122 237 356 2.04e-31 117
MS.gene024420.t1 MTR_4g117750 51.327 113 55 0 32 144 373 485 4.06e-31 118
MS.gene024420.t1 MTR_4g117750 43.243 148 73 3 1 141 215 358 4.25e-24 99.0
MS.gene024420.t1 MTR_1g055135 47.297 148 64 7 2 141 233 374 6.21e-31 116
MS.gene024420.t1 MTR_4g023200 51.034 145 59 7 3 140 219 358 6.86e-31 116
MS.gene024420.t1 MTR_4g118370 45.985 137 70 2 2 138 124 256 6.93e-31 114
MS.gene024420.t1 MTR_1g055250 44.156 154 76 6 2 151 131 278 7.10e-31 115
MS.gene024420.t1 MTR_4g118380 50.413 121 49 2 1 112 236 354 1.42e-30 115
MS.gene024420.t1 MTR_4g117770 47.887 142 71 1 3 141 225 366 5.75e-30 114
MS.gene024420.t1 MTR_4g117810 47.887 142 71 1 3 141 225 366 5.75e-30 114
MS.gene024420.t1 MTR_4g117850 47.761 134 69 1 3 135 240 373 7.28e-30 113
MS.gene024420.t1 MTR_4g117780 47.183 142 72 1 3 141 225 366 8.62e-30 113
MS.gene024420.t1 MTR_4g118400 45.652 138 57 4 1 136 173 294 1.69e-29 111
MS.gene024420.t1 MTR_3g034160 48.921 139 68 2 3 141 239 374 1.98e-29 112
MS.gene024420.t1 MTR_5g023000 55.556 90 40 0 52 141 9 98 6.80e-28 101
MS.gene024420.t1 MTR_5g070080 45.985 137 73 1 1 137 245 380 1.02e-27 108
MS.gene024420.t1 MTR_5g070088 43.478 138 77 1 1 137 243 380 9.08e-27 105
MS.gene024420.t1 MTR_4g116330 48.276 116 58 1 28 141 225 340 3.16e-25 100
MS.gene024420.t1 MTR_5g070130 42.657 143 76 4 3 141 236 376 2.40e-24 99.0
MS.gene024420.t1 MTR_4g023440 56.522 92 34 3 52 141 244 331 5.98e-23 94.4
MS.gene024420.t1 MTR_4g117530 53.333 90 39 2 52 141 166 252 3.24e-22 91.3
MS.gene024420.t1 MTR_8g102520 41.259 143 75 5 3 141 184 321 4.33e-22 92.0
MS.gene024420.t1 MTR_7g079400 41.096 146 75 5 3 141 195 336 4.68e-21 89.4
MS.gene024420.t1 MTR_7g079450 39.437 142 79 5 1 141 1 136 6.84e-20 82.0
MS.gene024420.t1 MTR_4g121580 37.419 155 83 5 10 161 227 370 1.75e-19 85.5
MS.gene024420.t1 MTR_7g079370 41.304 138 75 4 1 136 217 350 2.59e-18 82.0
MS.gene024420.t1 MTR_7g117720 50.538 93 38 4 50 136 181 271 1.45e-17 79.0
MS.gene024420.t1 MTR_4g114700 49.412 85 40 1 52 133 134 218 4.83e-17 77.0
MS.gene024420.t1 MTR_8g013005 58.621 58 24 0 84 141 1 58 1.15e-15 68.9
MS.gene024420.t1 MTR_8g098830 40.541 111 59 4 3 111 89 194 1.10e-14 70.5
MS.gene024420.t1 MTR_4g023430 51.220 82 33 3 65 141 142 221 1.24e-14 70.1
MS.gene024420.t1 MTR_7g079420 35.461 141 79 6 3 137 1005 1139 5.12e-13 67.8
MS.gene024420.t1 MTR_4g109290 61.538 52 20 0 90 141 136 187 2.17e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 50 sgRNAs with CRISPR-Local

Find 102 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTGCTGCCTTTGATTTGA+TGG 0.209250 7.2:-711308 MS.gene024420:CDS
TGACAAAGGAAAGCTCTTAA+AGG 0.291537 7.2:-711002 MS.gene024420:CDS
TCAGCACCCATATTTGATAT+TGG 0.305681 7.2:+711170 None:intergenic
CTCAAGAATTTCTCAGTCTC+TGG 0.316834 7.2:-711213 MS.gene024420:CDS
AGTGTTACCAATATCAAATA+TGG 0.320357 7.2:-711177 MS.gene024420:CDS
GAGCATATAGGGGAAAATTT+AGG 0.353297 7.2:+711082 None:intergenic
AACCACTACATGCATCTTGC+TGG 0.380472 7.2:+711245 None:intergenic
ATTCCAAGTTGCATTCATCT+TGG 0.407888 7.2:-711144 MS.gene024420:CDS
TCTTGCTGGTTAAAATCATC+TGG 0.411928 7.2:+711259 None:intergenic
CTCTGTACACAAGACCCCTT+TGG 0.429448 7.2:+710949 None:intergenic
TCTTCTTGCTCACGGTCACC+AGG 0.440545 7.2:+710911 None:intergenic
GAGTCTCTGCTTTCACTCCC+TGG 0.452167 7.2:-710929 MS.gene024420:CDS
ATTGGAACAGATGGTGCTAC+TGG 0.464541 7.2:-711040 MS.gene024420:CDS
TGAACCCTTGGAAAATGGTA+TGG 0.466991 7.2:-709347 MS.gene024420:CDS
TTGTGTCATCTTCTTGCTCA+CGG 0.468808 7.2:+710903 None:intergenic
ACAACTCAGTTGGATCCAAA+GGG 0.474232 7.2:-710964 MS.gene024420:CDS
AACAACTCAGTTGGATCCAA+AGG 0.494620 7.2:-710965 MS.gene024420:CDS
CCCTCTACATGCTGCTGAAG+AGG 0.508284 7.2:-709389 MS.gene024420:CDS
CTGCCTTTGATTTGATGGAA+AGG 0.520747 7.2:-711303 MS.gene024420:CDS
CAGTCTCTGGGCTAGAAAGA+AGG 0.521280 7.2:-711200 MS.gene024420:CDS
TTTCCTTTCCATCAAATCAA+AGG 0.524552 7.2:+711300 None:intergenic
GTGTTACCAATATCAAATAT+GGG 0.534322 7.2:-711176 MS.gene024420:CDS
AAGATGCATGTAGTGGTTTG+TGG 0.534677 7.2:-711240 MS.gene024420:CDS
TCAAACTATAACAACTCAGT+TGG 0.537725 7.2:-710974 MS.gene024420:CDS
CTCAGTCCTCAGCCTTCTCA+CGG 0.541171 7.2:+709266 None:intergenic
TTCAGCAGCATGTAGAGGGC+AGG 0.541602 7.2:+709393 None:intergenic
CAGCATGTAGAGGGCAGGCA+AGG 0.548887 7.2:+709398 None:intergenic
CCTCTTCAGCAGCATGTAGA+GGG 0.553362 7.2:+709389 None:intergenic
TGGTATGGACGAAGATGAAG+TGG 0.557870 7.2:-709332 MS.gene024420:CDS
TCAAGAATTTCTCAGTCTCT+GGG 0.557925 7.2:-711212 MS.gene024420:CDS
TCCTCTTCAGCAGCATGTAG+AGG 0.563825 7.2:+709388 None:intergenic
AGTCCAAGATGAATGCAACT+TGG 0.565089 7.2:+711141 None:intergenic
AGATGCATGTAGTGGTTTGT+GGG 0.567613 7.2:-711239 MS.gene024420:CDS
AACCAGCAAGATGCATGTAG+TGG 0.569186 7.2:-711247 MS.gene024420:CDS
TATAGGGGAAAATTTAGGAA+TGG 0.580414 7.2:+711087 None:intergenic
AACAGATGGTGCTACTGGAT+TGG 0.583240 7.2:-711035 MS.gene024420:CDS
TTGGTGAAGTATAATGACAA+AGG 0.586139 7.2:-711016 MS.gene024420:CDS
TCAGTCCTCAGCCTTCTCAC+GGG 0.589676 7.2:+709267 None:intergenic
TGGTTAAAATCATCTGGAAG+AGG 0.592635 7.2:+711265 None:intergenic
CAATGATGATGCCCGTGAGA+AGG 0.594262 7.2:-709278 MS.gene024420:CDS
GGTGACATTATTGGAACAGA+TGG 0.595107 7.2:-711049 MS.gene024420:CDS
TCTACATGCTGCTGAAGAGG+AGG 0.597150 7.2:-709386 MS.gene024420:CDS
AGATGACACAAACAAGAATG+AGG 0.605501 7.2:-710891 MS.gene024420:intron
CTTCTTGCTCACGGTCACCA+GGG 0.616825 7.2:+710912 None:intergenic
CGTGAGAAGGCTGAGGACTG+AGG 0.620559 7.2:-709265 None:intergenic
TATGGACGAAGATGAAGTGG+AGG 0.624135 7.2:-709329 MS.gene024420:CDS
AGTGGAGGAAGACGAATGTG+AGG 0.645424 7.2:-709314 MS.gene024420:CDS
TGATGCCCGTGAGAAGGCTG+AGG 0.672446 7.2:-709272 MS.gene024420:CDS
CAACTCAGTTGGATCCAAAG+GGG 0.719706 7.2:-710963 MS.gene024420:CDS
GACGAATGTGAGGAAAACGA+AGG 0.729844 7.2:-709304 MS.gene024420:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTATAAATATCAAGAAAA+TGG + chr7.2:709738-709757 None:intergenic 10.0%
!!! AAATTTACAGAATTTTAACA+TGG - chr7.2:710479-710498 MS.gene024420:intron 15.0%
!! GTAAATTAATGTGTAAATGA+AGG + chr7.2:710629-710648 None:intergenic 20.0%
!!! TTCTTTCACAAATTGTTTTT+AGG - chr7.2:711143-711162 MS.gene024420:CDS 20.0%
!!! TTTGAAATTTGAATCATTAC+TGG + chr7.2:710446-710465 None:intergenic 20.0%
! AAAAATTAAACCTTCTCACA+TGG - chr7.2:710898-710917 MS.gene024420:CDS 25.0%
! AAATATCAAGAAAATGGTGA+AGG + chr7.2:709732-709751 None:intergenic 25.0%
! AATCTAAACTATGCCAATAA+AGG + chr7.2:710955-710974 None:intergenic 25.0%
! ACTAATAATTTAGATGCTTC+TGG - chr7.2:710081-710100 MS.gene024420:intron 25.0%
! AGTGTTACCAATATCAAATA+TGG - chr7.2:709406-709425 MS.gene024420:CDS 25.0%
! ATATGTTTCGAAATGTTTAC+TGG - chr7.2:709871-709890 MS.gene024420:intron 25.0%
! ATGTACATTGTATAATACAG+TGG - chr7.2:710922-710941 MS.gene024420:CDS 25.0%
! CATTAATTTACTTGTTCGAT+TGG - chr7.2:710638-710657 MS.gene024420:intron 25.0%
! GTGTTACCAATATCAAATAT+GGG - chr7.2:709407-709426 MS.gene024420:CDS 25.0%
! TGATGAATCTATATATAGAC+AGG + chr7.2:710385-710404 None:intergenic 25.0%
! TGTACATTGTATAATACAGT+GGG - chr7.2:710923-710942 MS.gene024420:CDS 25.0%
! TGTGTACAGTATATATAGAA+CGG + chr7.2:710582-710601 None:intergenic 25.0%
!!! TTTCACAAATTGTTTTTAGG+AGG - chr7.2:711146-711165 MS.gene024420:CDS 25.0%
AACAAATCTGTCAATGTTAG+AGG + chr7.2:710148-710167 None:intergenic 30.0%
CTAACAATGCATGTTTGTAT+TGG - chr7.2:710785-710804 MS.gene024420:intron 30.0%
GCAAAAAATGGTGACATTAT+TGG - chr7.2:709525-709544 MS.gene024420:intron 30.0%
TATAGGGGAAAATTTAGGAA+TGG + chr7.2:709499-709518 None:intergenic 30.0%
TCAAACTATAACAACTCAGT+TGG - chr7.2:709609-709628 MS.gene024420:intron 30.0%
TCTCTCACATGCATAAATTA+CGG + chr7.2:710182-710201 None:intergenic 30.0%
TGCATTTGTAGGGTAATTTA+TGG - chr7.2:709805-709824 MS.gene024420:intron 30.0%
TTGGTGAAGTATAATGACAA+AGG - chr7.2:709567-709586 MS.gene024420:intron 30.0%
TTTCCTTTCCATCAAATCAA+AGG + chr7.2:709286-709305 None:intergenic 30.0%
! AATTTTGAACCCTTGGAAAA+TGG - chr7.2:711231-711250 MS.gene024420:CDS 30.0%
! ACTCACTCAACACATATTTT+AGG - chr7.2:710040-710059 MS.gene024420:intron 30.0%
!!! AATTGTTTTTAGGAGGAGTT+TGG - chr7.2:711153-711172 MS.gene024420:CDS 30.0%
!!! ATTTTTTGCAGAGCATATAG+GGG + chr7.2:709514-709533 None:intergenic 30.0%
!!! CATTTTTTGCAGAGCATATA+GGG + chr7.2:709515-709534 None:intergenic 30.0%
AATGTACATTCCATGTGAGA+AGG + chr7.2:710911-710930 None:intergenic 35.0%
AGATGACACAAACAAGAATG+AGG - chr7.2:709692-709711 MS.gene024420:intron 35.0%
AGTTCGATCTACATACTGAT+TGG - chr7.2:710742-710761 MS.gene024420:intron 35.0%
ATTCCAAGTTGCATTCATCT+TGG - chr7.2:709439-709458 MS.gene024420:intron 35.0%
CATGCATTGTTAGCATCAAT+AGG + chr7.2:710778-710797 None:intergenic 35.0%
CCTATATGCTCTGCAAAAAA+TGG - chr7.2:709513-709532 MS.gene024420:intron 35.0%
GAGCATATAGGGGAAAATTT+AGG + chr7.2:709504-709523 None:intergenic 35.0%
GATATAAACTGTCTAACCGT+TGG + chr7.2:710293-710312 None:intergenic 35.0%
GTAGATCGAACTGTAAATGA+AGG + chr7.2:710734-710753 None:intergenic 35.0%
GTGTATTATGAACTCTTCAG+TGG - chr7.2:709781-709800 MS.gene024420:intron 35.0%
TACCAAACTCTTGTAACCAA+CGG - chr7.2:710274-710293 MS.gene024420:intron 35.0%
TCAAGAATTTCTCAGTCTCT+GGG - chr7.2:709371-709390 MS.gene024420:CDS 35.0%
TCAGCACCCATATTTGATAT+TGG + chr7.2:709416-709435 None:intergenic 35.0%
TGACAAAGGAAAGCTCTTAA+AGG - chr7.2:709581-709600 MS.gene024420:intron 35.0%
TGGTTAAAATCATCTGGAAG+AGG + chr7.2:709321-709340 None:intergenic 35.0%
TTGGTTACAAGAGTTTGGTA+AGG + chr7.2:710274-710293 None:intergenic 35.0%
! ATCTAGCAATTTTGAACCCT+TGG - chr7.2:711224-711243 MS.gene024420:CDS 35.0%
! CAATACTCTGATTTGCAACA+CGG - chr7.2:710540-710559 MS.gene024420:intron 35.0%
! GTGTTATGCAAGTCATGTTT+TGG + chr7.2:711018-711037 None:intergenic 35.0%
! TCTTGCTGGTTAAAATCATC+TGG + chr7.2:709327-709346 None:intergenic 35.0%
!!! CCATTTTTTGCAGAGCATAT+AGG + chr7.2:709516-709535 None:intergenic 35.0%
AACAACTCAGTTGGATCCAA+AGG - chr7.2:709618-709637 MS.gene024420:intron 40.0%
AAGATGCATGTAGTGGTTTG+TGG - chr7.2:709343-709362 MS.gene024420:CDS 40.0%
ACAACTCAGTTGGATCCAAA+GGG - chr7.2:709619-709638 MS.gene024420:intron 40.0%
ACAAGAGTTTGGTAAGGTGA+GGG + chr7.2:710268-710287 None:intergenic 40.0%
AGTCCAAGATGAATGCAACT+TGG + chr7.2:709445-709464 None:intergenic 40.0%
CGAAACATATTATGCTCGTG+TGG + chr7.2:709861-709880 None:intergenic 40.0%
CTCAAGAATTTCTCAGTCTC+TGG - chr7.2:709370-709389 MS.gene024420:CDS 40.0%
GCACTCACAATTATTCGACT+TGG - chr7.2:710871-710890 MS.gene024420:intron 40.0%
GCAGTGAGTTTGACATAATC+AGG + chr7.2:710843-710862 None:intergenic 40.0%
GGTGACATTATTGGAACAGA+TGG - chr7.2:709534-709553 MS.gene024420:intron 40.0%
GGTTGTGATACTGTTCTAAC+AGG + chr7.2:710364-710383 None:intergenic 40.0%
TACAAGAGTTTGGTAAGGTG+AGG + chr7.2:710269-710288 None:intergenic 40.0%
TGAACCCTTGGAAAATGGTA+TGG - chr7.2:711236-711255 MS.gene024420:CDS 40.0%
TTGTGTCATCTTCTTGCTCA+CGG + chr7.2:709683-709702 None:intergenic 40.0%
! AACCGTTGGTTACAAGAGTT+TGG + chr7.2:710279-710298 None:intergenic 40.0%
! AGATGCATGTAGTGGTTTGT+GGG - chr7.2:709344-709363 MS.gene024420:CDS 40.0%
! GAGTATTGTGAAGAGATCAC+TGG + chr7.2:710528-710547 None:intergenic 40.0%
! TCGTCCATACCATTTTCCAA+GGG + chr7.2:711243-711262 None:intergenic 40.0%
! TTCGTCCATACCATTTTCCA+AGG + chr7.2:711244-711263 None:intergenic 40.0%
!! CATTGCTGCCTTTGATTTGA+TGG - chr7.2:709275-709294 MS.gene024420:CDS 40.0%
!! CTGCCTTTGATTTGATGGAA+AGG - chr7.2:709280-709299 MS.gene024420:CDS 40.0%
AACCACTACATGCATCTTGC+TGG + chr7.2:709341-709360 None:intergenic 45.0%
AACCAGCAAGATGCATGTAG+TGG - chr7.2:709336-709355 MS.gene024420:CDS 45.0%
CAACTCAGTTGGATCCAAAG+GGG - chr7.2:709620-709639 MS.gene024420:intron 45.0%
CTTCAGTGGCTGCATTTGTA+GGG - chr7.2:709795-709814 MS.gene024420:intron 45.0%
GACGAATGTGAGGAAAACGA+AGG - chr7.2:711279-711298 MS.gene024420:CDS 45.0%
TATGGACGAAGATGAAGTGG+AGG - chr7.2:711254-711273 MS.gene024420:CDS 45.0%
TCTTCAGTGGCTGCATTTGT+AGG - chr7.2:709794-709813 MS.gene024420:intron 45.0%
TGGTATGGACGAAGATGAAG+TGG - chr7.2:711251-711270 MS.gene024420:CDS 45.0%
! CAGTGGGCTCATTCCTTTAT+TGG - chr7.2:710939-710958 MS.gene024420:CDS 45.0%
!! AACAGATGGTGCTACTGGAT+TGG - chr7.2:709548-709567 MS.gene024420:intron 45.0%
!! ATTGGAACAGATGGTGCTAC+TGG - chr7.2:709543-709562 MS.gene024420:intron 45.0%
AGTGGAGGAAGACGAATGTG+AGG - chr7.2:711269-711288 MS.gene024420:CDS 50.0%
CCTCTTCAGCAGCATGTAGA+GGG + chr7.2:711197-711216 None:intergenic 50.0%
CTCTGTACACAAGACCCCTT+TGG + chr7.2:709637-709656 None:intergenic 50.0%
GAGTTTGGTAAGGTGAGGGA+AGG + chr7.2:710264-710283 None:intergenic 50.0%
TCCTCTTCAGCAGCATGTAG+AGG + chr7.2:711198-711217 None:intergenic 50.0%
TCTACATGCTGCTGAAGAGG+AGG - chr7.2:711197-711216 MS.gene024420:CDS 50.0%
! ATATAGAACGGCAGCGCTGA+CGG + chr7.2:710570-710589 None:intergenic 50.0%
! CAATGATGATGCCCGTGAGA+AGG - chr7.2:711305-711324 MS.gene024420:CDS 50.0%
! CAGTCTCTGGGCTAGAAAGA+AGG - chr7.2:709383-709402 MS.gene024420:CDS 50.0%
CCCTCTACATGCTGCTGAAG+AGG - chr7.2:711194-711213 MS.gene024420:CDS 55.0%
CTTCTTGCTCACGGTCACCA+GGG + chr7.2:709674-709693 None:intergenic 55.0%
GAGTCTCTGCTTTCACTCCC+TGG - chr7.2:709654-709673 MS.gene024420:intron 55.0%
TCAGTCCTCAGCCTTCTCAC+GGG + chr7.2:711319-711338 None:intergenic 55.0%
TCTTCTTGCTCACGGTCACC+AGG + chr7.2:709675-709694 None:intergenic 55.0%
TTCAGCAGCATGTAGAGGGC+AGG + chr7.2:711193-711212 None:intergenic 55.0%
CAGCATGTAGAGGGCAGGCA+AGG + chr7.2:711188-711207 None:intergenic 60.0%
TGATGCCCGTGAGAAGGCTG+AGG - chr7.2:711311-711330 MS.gene024420:CDS 60.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 709267 711338 709267 ID=MS.gene024420
chr7.2 mRNA 709267 711338 709267 ID=MS.gene024420.t1;Parent=MS.gene024420
chr7.2 exon 710892 711338 710892 ID=MS.gene024420.t1.exon1;Parent=MS.gene024420.t1
chr7.2 CDS 710892 711338 710892 ID=cds.MS.gene024420.t1;Parent=MS.gene024420.t1
chr7.2 exon 709267 709440 709267 ID=MS.gene024420.t1.exon2;Parent=MS.gene024420.t1
chr7.2 CDS 709267 709440 709267 ID=cds.MS.gene024420.t1;Parent=MS.gene024420.t1
Gene Sequence

>MS.gene024420

ATGTTTGTCATTGCTGCCTTTGATTTGATGGAAAGGAAACTGTTAGACATACCTCTTCCAGATGATTTTAACCAGCAAGATGCATGTAGTGGTTTGTGGGTATCTCAAGAATTTCTCAGTCTCTGGGCTAGAAAGAAGGAGTGTTACCAATATCAAATATGGGTGCTGAAAGATTCCAAGTTGCATTCATCTTGGACTAAGACTCTTCTTCTACGTACTAATCATAATGCCATTCCTAAATTTTCCCCTATATGCTCTGCAAAAAATGGTGACATTATTGGAACAGATGGTGCTACTGGATTGGTGAAGTATAATGACAAAGGAAAGCTCTTAAAGGATCACTCAAACTATAACAACTCAGTTGGATCCAAAGGGGTCTTGTGTACAGAGTCTCTGCTTTCACTCCCTGGTGACCGTGAGCAAGAAGATGACACAAACAAGAATGAGGTTTTGAAATATTCTCCTTCACCATTTTCTTGATATTTATAATTATAGTTCTTGATATTTATAATTAGTGTATTATGAACTCTTCAGTGGCTGCATTTGTAGGGTAATTTATGGTTGATTGCATTTGTAACATGAGCTAGTATGCCACACGAGCATAATATGTTTCGAAATGTTTACTGGTTAACTACTTGTAATATGTTTATTCGAAATATTGACTGTTGAATCTAGAGAAATTGAGAAAAACAGAAATTGTATTAATTGTTTCAATGAATTACACAGTGTGAAACTTCAGTATTTATAGCTTAGTCAGTTAGTTACAATCTCTAACTCACTCAACACATATTTTAGGAAAGTAACTAACAACTTAACTAATAATTTAGATGCTTCTGGAGAAAGCTTTACAGAGAACGTAAACTAGTTGTCTTAAGACACCTCTAACATTGACAGATTTGTTTGTGTGATTCACCGTAATTTATGCATGTGAGAGAGCTTGTATTAAAGAGTAGTCTAATTATCTTAGCTCAAGCTCATGAGAGCTTGCTATAGACCTTCCCTCACCTTACCAAACTCTTGTAACCAACGGTTAGACAGTTTATATCTACTGTAACAAACTGACTGACACATGTCAGTTAGCTTTAGCTTAGCAACCTGTTAGAACAGTATCACAACCTGTCTATATATAGATTCATCACTGCTGTAATGATTACACAAGAATCATAATAGAAAAATCCAGTAATGATTCAAATTTCAAAACATAATTATGAGAAATTTACAGAATTTTAACATGGTATTAGAAGAGCAGCGTAACGATCCAGTGATCTCTTCACAATACTCTGATTTGCAACACGGAACACCGTCAGCGCTGCCGTTCTATATATACTGTACACATTACTTAATTGATCTTTTATAATTCCTTCATTTACACATTAATTTACTTGTTCGATTGGTTTCTTTTTCTCATATGTGATGAATTGTGTAATTATATAGTACACATTATTTGTTTGATATTTTATTACTCCTTCATTTACAGTTCGATCTACATACTGATTGGTTCTTATTGTCCTATTGATGCTAACAATGCATGTTTGTATTGGCAATGAGATTAGCAAAATCACAGTTGTAGTAACCTGATTATGTCAAACTCACTGCGAATCTAAGCACTCACAATTATTCGACTTGGAGAGAAAAATTAAACCTTCTCACATGGAATGTACATTGTATAATACAGTGGGCTCATTCCTTTATTGGCATAGTTTAGATTACTTATATTTTTTGAAAGTTAAATTTTTGCTATCAGAAGTCCAAAACATGACTTGCATAACACAAATTTTAGTTTTATGTATCAATTTTGTTGCTTAACTTATATTATCAATCTATTGTAATATGTAATTCAATTTTTAAGTATGACTTTTTGCATATGAGTGACTCTTTCTTTCACAAATTGTTTTTAGGAGGAGTTTGGAACAAAGTACCTTGCCTGCCCTCTACATGCTGCTGAAGAGGAGGAAGCATCTAGCAATTTTGAACCCTTGGAAAATGGTATGGACGAAGATGAAGTGGAGGAAGACGAATGTGAGGAAAACGAAGGCAACAATGATGATGCCCGTGAGAAGGCTGAGGACTGA
Protein sequence

>MS.gene024420.t1

MFVIAAFDLMERKLLDIPLPDDFNQQDACSGLWVSQEFLSLWARKKECYQYQIWVLKDSKLHSSWTKTLLLRTNHNAIPKFSPICSAKNGDIIGTDGATGLVKYNDKGKLLKDHSNYNNSVGSKGVLCTESLLSLPGDREQEDDTNKNEEEFGTKYLACPLHAAEEEEASSNFEPLENGMDEDEVEEDECEENEGNNDDAREKAED