AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene51201


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51201.t1 MTR_2g048580 54.499 389 120 12 1 379 1 342 3.91e-125 364
MS.gene51201.t1 MTR_7g079370 55.367 354 134 9 37 379 16 356 2.15e-114 337
MS.gene51201.t1 MTR_7g079420 64.260 277 55 7 110 379 905 1144 1.53e-102 327
MS.gene51201.t1 MTR_7g079400 54.952 313 105 12 83 379 45 337 2.49e-99 298
MS.gene51201.t1 MTR_8g102520 44.103 390 139 15 1 379 1 322 6.42e-81 251
MS.gene51201.t1 MTR_3g034130 41.734 369 176 12 2 351 3 351 3.57e-79 248
MS.gene51201.t1 MTR_4g109270 42.785 395 179 15 1 379 1 364 4.04e-79 247
MS.gene51201.t1 MTR_3g103020 41.117 394 179 15 6 379 18 378 2.04e-77 243
MS.gene51201.t1 MTR_3g034180 41.000 400 190 15 1 379 115 489 1.41e-75 242
MS.gene51201.t1 MTR_6g060650 41.709 398 186 14 1 378 1 372 7.98e-75 237
MS.gene51201.t1 MTR_4g109280 42.455 391 181 16 1 379 1 359 2.09e-74 235
MS.gene51201.t1 MTR_4g094365 39.899 396 189 15 1 379 1 364 7.96e-74 234
MS.gene51201.t1 MTR_5g070080 39.855 414 180 17 3 379 5 386 8.25e-74 234
MS.gene51201.t1 MTR_4g023080 39.896 386 179 16 1 372 1 347 2.57e-73 232
MS.gene51201.t1 MTR_3g034160 39.547 397 198 12 1 378 1 374 1.87e-71 228
MS.gene51201.t1 MTR_5g070088 39.216 408 185 15 3 375 2 381 6.83e-71 227
MS.gene51201.t1 MTR_4g116330 41.344 387 181 15 3 373 18 374 2.03e-70 226
MS.gene51201.t1 MTR_4g021785 37.958 382 190 12 2 372 3 348 1.73e-69 222
MS.gene51201.t1 MTR_1g055135 40.657 396 188 15 2 378 7 374 2.08e-69 223
MS.gene51201.t1 MTR_8g433040 39.175 388 189 13 3 379 13 364 1.65e-68 220
MS.gene51201.t1 MTR_8g032380 39.175 388 189 13 3 379 13 364 1.65e-68 220
MS.gene51201.t1 MTR_4g117720 40.609 394 155 17 1 377 44 375 1.56e-67 218
MS.gene51201.t1 MTR_4g117780 38.228 395 200 15 1 379 1 367 2.54e-67 217
MS.gene51201.t1 MTR_4g023090 38.539 397 191 17 7 378 15 383 3.31e-67 218
MS.gene51201.t1 MTR_4g117770 39.494 395 195 13 1 379 1 367 4.12e-67 216
MS.gene51201.t1 MTR_4g117810 39.494 395 195 13 1 379 1 367 4.12e-67 216
MS.gene51201.t1 MTR_5g070130 39.604 404 180 16 1 375 4 372 2.17e-66 215
MS.gene51201.t1 MTR_4g117850 39.426 383 184 17 7 372 22 373 1.06e-65 213
MS.gene51201.t1 MTR_4g023120 37.121 396 197 14 8 379 3 370 1.32e-65 213
MS.gene51201.t1 MTR_4g122850 40.897 379 180 18 19 379 12 364 3.71e-65 212
MS.gene51201.t1 MTR_4g023070 37.532 389 191 14 8 372 3 363 1.09e-64 211
MS.gene51201.t1 MTR_4g118380 40.318 377 173 14 1 347 1 355 2.44e-64 209
MS.gene51201.t1 MTR_5g097210 40.921 391 174 18 3 373 4 357 7.35e-64 208
MS.gene51201.t1 MTR_8g032390 38.802 384 177 14 3 375 35 371 2.59e-63 207
MS.gene51201.t1 MTR_4g117750 40.000 390 177 15 6 374 1 354 8.17e-60 201
MS.gene51201.t1 MTR_4g023440 37.209 387 158 16 7 379 17 332 3.25e-59 195
MS.gene51201.t1 MTR_5g069120 56.044 182 75 1 18 199 1 177 5.24e-59 189
MS.gene51201.t1 MTR_4g023190 38.281 384 189 15 3 373 5 353 6.45e-59 195
MS.gene51201.t1 MTR_4g023130 36.104 385 154 14 1 372 1 306 1.63e-58 192
MS.gene51201.t1 MTR_4g023380 35.854 410 185 14 3 378 11 376 7.05e-58 193
MS.gene51201.t1 MTR_4g023150 38.182 385 189 16 3 373 5 354 7.67e-58 192
MS.gene51201.t1 MTR_8g013010 42.708 288 136 11 1 284 47 309 9.81e-58 191
MS.gene51201.t1 MTR_4g116330 37.913 393 159 16 3 379 18 341 1.41e-55 186
MS.gene51201.t1 MTR_4g023200 38.182 385 189 16 3 373 5 354 5.25e-54 182
MS.gene51201.t1 MTR_4g121580 37.363 364 171 17 1 348 1 323 1.12e-48 169
MS.gene51201.t1 MTR_8g433030 34.375 384 161 16 3 375 35 338 9.42e-46 160
MS.gene51201.t1 MTR_8g098830 54.438 169 60 7 188 345 32 194 4.24e-45 155
MS.gene51201.t1 MTR_4g117870 36.076 316 137 11 74 379 7 267 8.57e-45 155
MS.gene51201.t1 MTR_4g118400 36.977 311 127 13 83 373 33 294 4.34e-44 154
MS.gene51201.t1 MTR_1g055195 38.908 293 132 13 97 373 211 472 8.26e-43 155
MS.gene51201.t1 MTR_1g055165 31.675 382 178 13 7 378 9 317 8.58e-42 149
MS.gene51201.t1 MTR_4g116340 38.976 254 116 9 1 247 26 247 8.85e-40 142
MS.gene51201.t1 MTR_4g118370 40.602 266 105 12 123 376 33 257 1.23e-37 136
MS.gene51201.t1 MTR_1g055175 40.909 198 103 5 190 378 8 200 2.55e-37 134
MS.gene51201.t1 MTR_7g079450 54.422 147 45 8 243 379 3 137 1.60e-34 124
MS.gene51201.t1 MTR_4g133170 29.180 305 181 10 8 302 4 283 9.16e-32 124
MS.gene51201.t1 MTR_4g116320 40.741 216 111 9 166 373 46 252 6.44e-30 116
MS.gene51201.t1 MTR_4g117530 32.759 290 134 11 95 379 20 253 8.67e-30 115
MS.gene51201.t1 MTR_4g117430 42.857 147 63 5 122 268 14 139 2.29e-27 106
MS.gene51201.t1 MTR_7g117720 38.710 217 93 10 1 210 1 184 1.81e-26 107
MS.gene51201.t1 MTR_6g463430 38.384 198 104 10 190 379 15 202 2.39e-26 105
MS.gene51201.t1 MTR_5g022420 29.618 314 166 12 7 306 26 298 4.94e-26 108
MS.gene51201.t1 MTR_8g040935 37.313 201 108 9 191 379 14 208 5.02e-26 104
MS.gene51201.t1 MTR_1g055070 29.963 267 163 10 8 261 49 304 6.82e-26 107
MS.gene51201.t1 MTR_4g107820 30.350 257 157 8 8 263 36 271 7.43e-26 107
MS.gene51201.t1 MTR_4g107780 30.350 257 157 8 8 263 36 271 7.43e-26 107
MS.gene51201.t1 MTR_4g107820 30.350 257 157 8 8 263 36 271 1.26e-25 107
MS.gene51201.t1 MTR_4g107780 30.350 257 157 8 8 263 36 271 1.40e-25 107
MS.gene51201.t1 MTR_3g009310 27.937 383 223 16 8 371 42 390 1.84e-25 106
MS.gene51201.t1 MTR_3g007330 27.922 308 177 13 8 303 48 322 4.29e-25 105
MS.gene51201.t1 MTR_1g055250 37.037 216 103 10 151 350 44 242 6.23e-25 103
MS.gene51201.t1 MTR_2g021150 30.233 344 189 19 7 327 13 328 4.51e-24 102
MS.gene51201.t1 MTR_4g055060 30.403 273 148 15 8 262 30 278 1.21e-23 101
MS.gene51201.t1 MTR_0115s0020 27.160 405 244 15 8 376 10 399 2.76e-23 100
MS.gene51201.t1 MTR_4g114700 33.818 275 110 11 107 370 5 218 4.44e-23 97.1
MS.gene51201.t1 MTR_3g007360 28.571 315 167 15 11 303 55 333 4.44e-23 100
MS.gene51201.t1 MTR_8g467140 30.943 265 147 10 6 261 30 267 6.96e-23 98.6
MS.gene51201.t1 MTR_5g057710 27.832 309 181 14 8 303 46 325 1.03e-22 99.0
MS.gene51201.t1 MTR_3g006670 32.154 311 168 16 8 303 49 331 2.92e-22 97.8
MS.gene51201.t1 MTR_3g013740 29.151 271 162 9 5 260 41 296 3.18e-22 97.8
MS.gene51201.t1 MTR_3g007410 29.114 316 164 17 11 303 55 333 4.04e-22 97.4
MS.gene51201.t1 MTR_5g057690 28.431 306 173 14 8 303 46 315 7.42e-22 96.3
MS.gene51201.t1 MTR_5g011200 27.273 297 187 13 8 298 17 290 7.66e-22 96.3
MS.gene51201.t1 MTR_0064s0160 27.119 354 215 13 1 324 35 375 8.64e-22 96.7
MS.gene51201.t1 MTR_3g014540 29.502 261 157 12 8 261 29 269 8.81e-22 95.9
MS.gene51201.t1 MTR_2g055970 28.021 389 228 17 5 374 208 563 1.02e-21 97.1
MS.gene51201.t1 MTR_2g025420 26.959 319 188 13 8 298 6 307 1.06e-21 96.3
MS.gene51201.t1 MTR_4g109290 35.542 166 67 4 7 172 8 133 4.83e-21 90.1
MS.gene51201.t1 MTR_1g094210 27.720 386 213 19 8 371 57 398 8.91e-21 93.2
MS.gene51201.t1 MTR_1g068835 25.085 295 195 8 8 298 4 276 9.94e-21 93.2
MS.gene51201.t1 MTR_5g057790 27.097 310 182 14 8 303 46 325 1.18e-20 92.8
MS.gene51201.t1 MTR_0667s0010 25.566 309 189 10 8 298 6 291 1.33e-20 92.8
MS.gene51201.t1 MTR_1g094210 27.371 369 204 19 8 353 57 384 1.50e-20 92.8
MS.gene51201.t1 MTR_7g066030 26.877 413 238 18 1 372 14 403 1.66e-20 92.4
MS.gene51201.t1 MTR_1g068875 25.763 295 192 11 8 298 4 275 1.77e-20 92.4
MS.gene51201.t1 MTR_3g036290 27.114 343 196 17 8 335 22 325 2.73e-20 91.7
MS.gene51201.t1 MTR_3g009240 29.545 264 159 7 8 266 36 277 2.74e-20 91.7
MS.gene51201.t1 MTR_6g021880 26.836 354 207 18 19 346 31 358 3.07e-20 91.7
MS.gene51201.t1 MTR_4g061340 29.348 276 143 13 8 261 26 271 3.35e-20 91.3
MS.gene51201.t1 MTR_4g108820 29.114 316 149 14 7 312 41 291 4.83e-20 90.1
MS.gene51201.t1 MTR_2g028140 26.316 323 185 12 8 298 5 306 6.56e-20 90.9
MS.gene51201.t1 MTR_3g007430 27.541 305 182 11 11 303 46 323 6.61e-20 90.9
MS.gene51201.t1 MTR_1g056710 27.715 267 153 12 8 261 34 273 7.20e-20 90.5
MS.gene51201.t1 MTR_3g011060 28.679 265 162 10 8 260 28 277 8.55e-20 90.5
MS.gene51201.t1 MTR_3g013770 29.508 305 181 12 8 297 33 318 1.07e-19 90.1
MS.gene51201.t1 MTR_2g426070 27.244 312 185 13 9 298 7 298 1.31e-19 90.1
MS.gene51201.t1 MTR_8g073550 30.516 213 114 8 7 208 29 218 1.52e-19 87.0
MS.gene51201.t1 MTR_3g014570 28.195 266 154 10 8 261 29 269 3.42e-19 88.6
MS.gene51201.t1 MTR_1g097560 30.258 271 141 12 5 264 33 266 3.89e-19 88.2
MS.gene51201.t1 MTR_4g070550 26.646 319 183 13 8 298 5 300 8.06e-19 87.8
MS.gene51201.t1 MTR_2g426060 26.488 336 199 15 8 317 6 319 1.07e-18 87.4
MS.gene51201.t1 MTR_6g065980 27.832 309 167 16 8 303 16 281 1.39e-18 86.7
MS.gene51201.t1 MTR_7g407070 28.102 274 158 11 8 261 32 286 1.40e-18 87.0
MS.gene51201.t1 MTR_5g048160 25.743 404 248 14 8 375 4 391 1.55e-18 86.7
MS.gene51201.t1 MTR_5g057020 27.393 303 175 13 8 303 46 310 1.77e-18 85.9
MS.gene51201.t1 MTR_3g010390 26.837 313 197 11 8 303 33 330 2.56e-18 86.3
MS.gene51201.t1 MTR_1g112930 27.961 304 182 13 8 303 25 299 2.70e-18 85.9
MS.gene51201.t1 MTR_7g070440 26.715 277 156 10 6 264 5 252 4.20e-18 85.1
MS.gene51201.t1 MTR_3g010870 26.452 310 178 14 8 303 37 310 4.83e-18 85.1
MS.gene51201.t1 MTR_7g013590 28.053 303 178 14 15 303 43 319 5.01e-18 85.5
MS.gene51201.t1 MTR_2g426090 26.623 308 194 12 6 298 5 295 7.29e-18 84.7
MS.gene51201.t1 MTR_1g097330 29.259 270 142 11 8 264 16 249 7.39e-18 85.1
MS.gene51201.t1 MTR_1g061330 24.227 388 246 15 8 377 4 361 1.00e-17 84.3
MS.gene51201.t1 MTR_1g037540 25.765 392 228 15 15 365 12 381 1.06e-17 84.3
MS.gene51201.t1 MTR_1g115160 26.115 314 175 13 6 303 20 292 1.14e-17 84.0
MS.gene51201.t1 MTR_7g066010 24.363 353 203 12 1 327 14 328 1.21e-17 84.0
MS.gene51201.t1 MTR_3g010520 27.344 256 148 9 8 261 25 244 1.37e-17 83.6
MS.gene51201.t1 MTR_6g090180 26.603 312 189 11 3 284 42 343 1.92e-17 84.0
MS.gene51201.t1 MTR_7g070830 27.667 300 156 11 8 264 21 302 1.99e-17 83.6
MS.gene51201.t1 MTR_2g028130 25.141 354 212 15 8 327 5 339 2.59e-17 83.2
MS.gene51201.t1 MTR_5g069930 27.473 273 156 10 6 260 4 252 3.39e-17 82.8
MS.gene51201.t1 MTR_3g011100 27.597 308 183 13 8 297 235 520 4.12e-17 83.2
MS.gene51201.t1 MTR_4g080200 27.303 304 181 11 8 301 3 276 4.34e-17 82.0
MS.gene51201.t1 MTR_2g029990 28.571 259 157 12 9 261 52 288 4.35e-17 82.4
MS.gene51201.t1 MTR_6g034720 44.628 121 57 5 134 253 53 164 4.56e-17 79.7
MS.gene51201.t1 MTR_2g046920 26.791 321 182 15 1 303 17 302 4.56e-17 82.4
MS.gene51201.t1 MTR_2g028160 26.710 307 200 11 8 298 5 302 6.39e-17 82.0
MS.gene51201.t1 MTR_1g097490 29.391 279 153 12 5 271 46 292 7.96e-17 81.6
MS.gene51201.t1 MTR_4g023430 47.619 84 39 1 3 86 36 114 8.82e-17 79.0
MS.gene51201.t1 MTR_7g070880 26.330 376 200 16 8 327 21 375 1.44e-16 81.3
MS.gene51201.t1 MTR_2g426020 25.080 311 189 12 8 298 6 292 1.46e-16 80.9
MS.gene51201.t1 MTR_2g425980 27.796 313 184 15 8 298 5 297 1.51e-16 80.9
MS.gene51201.t1 MTR_7g016930 28.136 295 172 15 3 284 11 278 1.92e-16 80.1
MS.gene51201.t1 MTR_0128s0020 28.467 274 162 10 6 262 16 272 1.97e-16 80.5
MS.gene51201.t1 MTR_1g068860 25.000 320 211 11 6 317 2 300 1.99e-16 80.5
MS.gene51201.t1 MTR_5g007610 26.159 302 191 13 8 298 41 321 2.65e-16 80.1
MS.gene51201.t1 MTR_2g021190 26.217 267 157 12 8 261 21 260 2.77e-16 80.1
MS.gene51201.t1 MTR_3g058480 29.412 272 147 13 8 261 39 283 4.05e-16 79.0
MS.gene51201.t1 MTR_6g004660 28.438 320 179 17 8 303 16 309 4.67e-16 79.3
MS.gene51201.t1 MTR_2g024110 24.642 349 215 16 8 335 4 325 4.70e-16 79.3
MS.gene51201.t1 MTR_2g028110 26.471 306 183 12 8 298 4 282 5.26e-16 79.3
MS.gene51201.t1 MTR_1g054575 27.597 308 178 14 8 303 52 326 5.32e-16 80.1
MS.gene51201.t1 MTR_4g031770 28.358 268 149 13 8 261 4 242 6.38e-16 79.0
MS.gene51201.t1 MTR_3g010590 25.329 304 182 15 8 303 39 305 7.11e-16 79.0
MS.gene51201.t1 MTR_3g083010 26.899 316 191 14 8 298 6 306 7.34e-16 79.0
MS.gene51201.t1 MTR_3g436150 27.604 384 217 19 8 367 32 378 1.48e-15 77.8
MS.gene51201.t1 MTR_1g050542 26.537 309 180 14 8 304 58 331 1.55e-15 77.8
MS.gene51201.t1 MTR_8g101580 30.797 276 139 17 8 265 45 286 1.80e-15 77.8
MS.gene51201.t1 MTR_2g104340 24.150 294 173 10 7 275 13 281 2.13e-15 77.4
MS.gene51201.t1 MTR_3g007270 27.119 295 161 16 8 276 47 313 2.16e-15 77.4
MS.gene51201.t1 MTR_5g057643 25.847 236 142 9 8 230 46 261 2.20e-15 75.9
MS.gene51201.t1 MTR_7g028660 28.322 286 151 12 6 264 9 267 2.49e-15 77.0
MS.gene51201.t1 MTR_3g030240 25.292 257 156 9 8 261 40 263 2.57e-15 77.0
MS.gene51201.t1 MTR_4g014370 24.648 284 176 9 3 251 6 286 3.10e-15 77.0
MS.gene51201.t1 MTR_2g021155 24.917 301 195 12 11 303 39 316 5.68e-15 77.0
MS.gene51201.t1 MTR_5g057040 28.774 212 126 8 8 213 46 238 6.00e-15 77.0
MS.gene51201.t1 MTR_4g118360 38.889 126 62 6 257 373 1 120 6.15e-15 71.2
MS.gene51201.t1 MTR_8g039500 25.083 303 182 14 3 287 7 282 7.48e-15 75.5
MS.gene51201.t1 MTR_1g054725 26.471 272 157 12 7 261 19 264 7.50e-15 75.5
MS.gene51201.t1 MTR_0267s0050 25.595 336 183 13 5 303 4 309 8.06e-15 75.5
MS.gene51201.t1 MTR_3g030250 24.194 310 180 13 8 303 37 305 8.57e-15 75.5
MS.gene51201.t1 MTR_7g017040 25.240 416 225 25 7 372 15 394 1.34e-14 75.1
MS.gene51201.t1 MTR_3g024110 25.000 256 162 9 8 260 101 329 1.37e-14 75.1
MS.gene51201.t1 MTR_3g006570 23.643 258 169 11 8 260 21 255 1.44e-14 74.7
MS.gene51201.t1 MTR_5g069760 26.812 276 149 11 6 260 4 247 1.54e-14 74.7
MS.gene51201.t1 MTR_2g066170 24.309 362 234 15 3 344 7 348 1.55e-14 74.7
MS.gene51201.t1 MTR_2g047200 28.374 289 149 14 6 264 18 278 1.76e-14 74.7
MS.gene51201.t1 MTR_3g009260 26.692 266 153 11 11 266 44 277 1.93e-14 74.3
MS.gene51201.t1 MTR_0044s0300 25.402 311 183 15 8 303 38 314 1.94e-14 74.3
MS.gene51201.t1 MTR_6g053260 27.675 271 148 11 8 261 337 576 2.20e-14 75.1
MS.gene51201.t1 MTR_3g010970 26.471 306 171 15 11 303 51 315 2.46e-14 74.3
MS.gene51201.t1 MTR_4g117550 24.055 291 181 11 2 268 11 285 2.93e-14 73.9
MS.gene51201.t1 MTR_7g007300 26.316 266 148 10 6 260 101 329 3.40e-14 73.9
MS.gene51201.t1 MTR_3g011120 28.435 313 168 17 5 292 11 292 3.77e-14 73.6
MS.gene51201.t1 MTR_6g027910 25.095 263 176 7 11 261 12 265 4.07e-14 73.6
MS.gene51201.t1 MTR_6g053240 26.471 272 155 10 8 261 28 272 4.14e-14 73.6
MS.gene51201.t1 MTR_3g024040 26.984 252 149 10 15 263 38 257 4.37e-14 73.2
MS.gene51201.t1 MTR_6g086825 26.250 400 245 22 7 370 69 454 4.57e-14 73.6
MS.gene51201.t1 MTR_7g055870 27.425 299 161 14 8 264 13 297 6.37e-14 73.2
MS.gene51201.t1 MTR_2g021050 25.159 314 164 15 8 298 5 270 7.83e-14 72.8
MS.gene51201.t1 MTR_3g023930 26.490 302 174 13 8 303 34 293 7.93e-14 72.4
MS.gene51201.t1 MTR_8g099460 25.402 311 189 13 5 298 2 286 8.88e-14 72.4
MS.gene51201.t1 MTR_3g030330 25.714 315 191 15 8 312 20 301 8.97e-14 72.4
MS.gene51201.t1 MTR_2g078900 25.237 317 175 15 8 303 33 308 1.23e-13 72.0
MS.gene51201.t1 MTR_5g037680 24.390 287 172 11 1 264 1 265 1.29e-13 72.4
MS.gene51201.t1 MTR_3g058440 26.667 270 155 12 8 261 35 277 1.40e-13 71.2
MS.gene51201.t1 MTR_0242s0060 26.690 281 172 9 6 263 7 276 1.50e-13 72.0
MS.gene51201.t1 MTR_0242s0040 26.690 281 172 9 6 263 7 276 1.50e-13 72.0
MS.gene51201.t1 MTR_5g027370 25.157 318 190 14 12 303 33 328 1.62e-13 72.0
MS.gene51201.t1 MTR_7g057270 25.970 335 182 12 8 303 26 333 1.67e-13 72.0
MS.gene51201.t1 MTR_0627s0010 24.784 347 189 14 8 307 38 359 2.04e-13 71.6
MS.gene51201.t1 MTR_3g010870 27.039 233 131 10 8 232 37 238 2.06e-13 70.9
MS.gene51201.t1 MTR_5g027330 25.157 318 190 14 12 303 44 339 2.06e-13 71.6
MS.gene51201.t1 MTR_4g130330 24.759 311 188 12 3 284 2 295 2.07e-13 71.2
MS.gene51201.t1 MTR_7g056290 26.000 300 155 12 2 263 17 287 2.10e-13 71.6
MS.gene51201.t1 MTR_4g129190 28.163 245 142 9 4 238 2 222 2.64e-13 71.2
MS.gene51201.t1 MTR_5g010660 28.095 210 125 7 8 204 34 230 3.27e-13 71.2
MS.gene51201.t1 MTR_5g023000 41.837 98 46 3 290 379 5 99 3.48e-13 65.5
MS.gene51201.t1 MTR_7g056503 25.926 270 178 10 7 264 20 279 4.04e-13 70.5
MS.gene51201.t1 MTR_3g006500 24.138 319 179 12 8 303 17 295 4.37e-13 70.1
MS.gene51201.t1 MTR_3g030310 24.756 307 183 14 8 298 21 295 4.52e-13 70.5
MS.gene51201.t1 MTR_3g058470 30.870 230 126 9 8 221 37 249 4.67e-13 70.1
MS.gene51201.t1 MTR_2g021800 25.246 305 182 11 2 268 10 306 5.17e-13 70.5
MS.gene51201.t1 MTR_3g010430 24.727 275 161 13 8 260 36 286 5.51e-13 70.1
MS.gene51201.t1 MTR_5g008530 59.184 49 20 0 5 53 15 63 6.63e-13 63.9
MS.gene51201.t1 MTR_7g077970 25.338 296 159 9 8 264 7 279 7.85e-13 69.7
MS.gene51201.t1 MTR_7g056710 27.857 280 146 13 7 263 17 263 9.09e-13 69.3
MS.gene51201.t1 MTR_7g067680 24.127 315 181 11 8 310 49 317 1.04e-12 69.3
MS.gene51201.t1 MTR_7g055987 28.214 280 136 14 10 263 22 262 1.08e-12 68.9
MS.gene51201.t1 MTR_7g066000 25.368 272 180 10 5 264 22 282 1.11e-12 69.3
MS.gene51201.t1 MTR_0097s0030 26.481 287 151 10 5 264 11 264 1.26e-12 68.9
MS.gene51201.t1 MTR_2g047240 26.481 287 151 10 5 264 11 264 1.26e-12 68.9
MS.gene51201.t1 MTR_1g068905 25.869 259 147 8 8 261 4 222 1.36e-12 68.2
MS.gene51201.t1 MTR_7g066100 25.342 292 167 11 4 264 7 278 1.38e-12 68.9
MS.gene51201.t1 MTR_3g013950 23.853 327 202 10 5 303 4 311 1.40e-12 68.9
MS.gene51201.t1 MTR_2g046800 26.230 305 162 15 3 270 9 287 1.73e-12 68.6
MS.gene51201.t1 MTR_0760s0010 25.484 310 176 15 13 307 52 321 1.94e-12 68.6
MS.gene51201.t1 MTR_7g055930 25.743 303 175 13 1 264 6 297 1.96e-12 68.6
MS.gene51201.t1 MTR_5g022090 33.526 173 96 8 8 172 34 195 2.06e-12 68.6
MS.gene51201.t1 MTR_2g065860 22.635 296 196 8 3 280 7 287 2.28e-12 68.2
MS.gene51201.t1 MTR_3g010920 25.413 303 178 15 8 303 44 305 2.61e-12 68.2
MS.gene51201.t1 MTR_4g024890 26.335 281 159 12 6 264 8 262 2.78e-12 67.8
MS.gene51201.t1 MTR_4g028510 26.911 327 198 16 8 303 16 332 2.95e-12 68.2
MS.gene51201.t1 MTR_7g062060 26.712 292 173 11 2 264 6 285 3.13e-12 67.8
MS.gene51201.t1 MTR_5g023570 35.455 110 62 2 7 116 36 136 3.64e-12 63.9
MS.gene51201.t1 MTR_7g055977 27.036 307 159 14 6 279 5 279 3.72e-12 67.4
MS.gene51201.t1 MTR_5g096710 23.669 338 203 13 5 312 20 332 3.92e-12 67.4
MS.gene51201.t1 MTR_1g055200 40.367 109 43 4 107 211 5 95 3.95e-12 62.8
MS.gene51201.t1 MTR_8g046310 23.196 388 254 13 7 375 15 377 4.05e-12 67.4
MS.gene51201.t1 MTR_3g011650 27.586 232 129 10 11 234 82 282 5.48e-12 66.2
MS.gene51201.t1 MTR_5g046300 24.601 313 181 16 8 303 4 278 7.86e-12 66.2
MS.gene51201.t1 MTR_5g046290 24.601 313 181 16 8 303 4 278 7.86e-12 66.2
MS.gene51201.t1 MTR_4g122860 32.000 200 84 12 196 379 157 320 7.96e-12 66.2
MS.gene51201.t1 MTR_2g066200 23.306 369 231 14 3 344 7 350 8.20e-12 66.6
MS.gene51201.t1 MTR_2g021252 27.228 202 135 4 11 211 50 240 9.23e-12 66.2
MS.gene51201.t1 MTR_7g091630 25.430 291 169 10 2 264 26 296 9.32e-12 66.6
MS.gene51201.t1 MTR_7g060940 25.249 301 149 11 1 264 15 276 9.59e-12 66.2
MS.gene51201.t1 MTR_2g046900 29.091 275 162 15 4 266 24 277 1.00e-11 66.2
MS.gene51201.t1 MTR_4g019990 25.862 290 162 11 5 264 3 269 1.06e-11 66.2
MS.gene51201.t1 MTR_3g023940 29.577 142 77 2 8 136 34 165 1.46e-11 65.9
MS.gene51201.t1 MTR_0464s0020 24.749 299 160 11 6 263 21 295 1.56e-11 65.9
MS.gene51201.t1 MTR_3g036335 23.567 314 189 13 8 303 41 321 1.61e-11 65.5
MS.gene51201.t1 MTR_6g013270 25.161 310 193 15 8 303 29 313 1.82e-11 65.5
MS.gene51201.t1 MTR_3g024150 23.102 303 194 11 11 303 38 311 1.90e-11 65.5
MS.gene51201.t1 MTR_2g026010 24.832 298 198 10 8 298 4 282 2.35e-11 65.1
MS.gene51201.t1 MTR_7g050480 25.632 277 146 10 1 259 15 249 2.98e-11 64.7
MS.gene51201.t1 MTR_6g017280 25.455 275 165 13 6 260 7 261 3.58e-11 64.7
MS.gene51201.t1 MTR_2g046830 27.215 316 187 14 4 306 21 306 3.68e-11 64.7
MS.gene51201.t1 MTR_7g052150 29.101 189 99 6 6 168 20 199 4.04e-11 64.3
MS.gene51201.t1 MTR_7g050520 25.271 277 147 10 1 259 15 249 4.16e-11 64.3
MS.gene51201.t1 MTR_0831s0010 24.286 280 161 11 5 260 47 299 4.21e-11 64.3
MS.gene51201.t1 MTR_4g129160 26.822 343 185 16 5 303 4 324 4.22e-11 64.3
MS.gene51201.t1 MTR_1g029650 23.856 306 163 11 1 270 1 272 4.39e-11 64.3
MS.gene51201.t1 MTR_7g062100 26.207 290 143 12 8 264 24 275 4.79e-11 64.3
MS.gene51201.t1 MTR_3g009250 27.155 232 129 10 11 234 44 243 5.11e-11 62.8
MS.gene51201.t1 MTR_4g030110 26.027 292 164 12 2 264 24 292 5.25e-11 63.9
MS.gene51201.t1 MTR_7g056760 25.087 287 157 13 6 260 21 281 6.61e-11 63.9
MS.gene51201.t1 MTR_7g056390 24.742 291 159 11 8 263 18 283 7.28e-11 63.5
MS.gene51201.t1 MTR_5g068040 25.899 278 148 10 8 264 16 256 8.23e-11 63.5
MS.gene51201.t1 MTR_5g097330 24.344 419 242 17 3 374 11 401 9.16e-11 63.5
MS.gene51201.t1 MTR_7g056200 35.714 140 66 6 6 129 21 152 9.71e-11 63.2
MS.gene51201.t1 MTR_1g114700 23.226 310 183 12 8 298 29 302 9.77e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51201.t1 AT3G06240 28.994 338 171 12 4 298 32 343 7.15e-25 105
MS.gene51201.t1 AT4G22390 25.559 313 192 11 9 303 5 294 2.20e-20 92.4
MS.gene51201.t1 AT4G22390 25.559 313 192 11 9 303 5 294 2.78e-20 92.0
MS.gene51201.t1 AT3G23880 27.434 226 146 5 8 231 14 223 7.69e-18 84.3
MS.gene51201.t1 AT4G12560 25.000 320 191 12 8 303 4 298 3.99e-17 82.8
MS.gene51201.t1 AT4G12560 25.000 320 191 12 8 303 4 298 3.99e-17 82.8
MS.gene51201.t1 AT4G12560 25.000 320 191 12 8 303 4 298 3.99e-17 82.8
MS.gene51201.t1 AT5G49610 27.273 308 177 11 3 298 4 276 3.65e-16 79.3
MS.gene51201.t1 AT2G16810 24.809 262 168 9 7 262 40 278 3.47e-13 70.1
MS.gene51201.t1 AT3G22720 24.092 303 194 12 8 300 5 281 7.21e-13 69.7
MS.gene51201.t1 AT3G16210 25.292 257 155 8 5 260 2 222 2.45e-12 68.2
MS.gene51201.t1 AT3G52320 26.744 258 160 10 8 260 27 260 4.25e-12 67.4
MS.gene51201.t1 AT1G47790 24.188 277 177 6 2 271 19 269 6.43e-12 67.0
MS.gene51201.t1 AT3G10240 22.781 338 209 13 8 327 27 330 8.74e-12 66.6
MS.gene51201.t1 AT1G33530 26.780 295 147 14 5 285 94 333 2.18e-11 65.5
MS.gene51201.t1 AT1G11620 25.660 265 155 10 8 260 6 240 2.48e-11 65.1
MS.gene51201.t1 AT4G19940 23.625 309 197 11 8 296 35 324 2.61e-11 65.1
MS.gene51201.t1 AT1G12855 24.847 326 187 16 8 301 71 370 6.92e-11 63.9
MS.gene51201.t1 AT1G12870 24.038 312 192 13 8 301 33 317 6.93e-11 63.9

Find 73 sgRNAs with CRISPR-Local

Find 86 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTATTGCCTTTGATTTAA+AGG 0.118424 7.3:+27773255 MS.gene51201:CDS
TTTGATGTATTTGCACTTAA+TGG 0.122988 7.3:+27773343 MS.gene51201:CDS
ATGTAGAGGGTTTCTATTAT+TGG 0.282829 7.3:+27772853 MS.gene51201:CDS
ATGCATTAAAATCTACTGTT+AGG 0.309713 7.3:-27772751 None:intergenic
TAGTGTATGGGTTTCAGATA+TGG 0.335018 7.3:+27773372 MS.gene51201:CDS
TCATTGGCTGGTTTATAATC+AGG 0.335450 7.3:+27773216 MS.gene51201:CDS
TACATTGTCGGCATCATTAC+CGG 0.346934 7.3:-27772954 None:intergenic
GGAAATTCTGTTGAGGTTGC+CGG 0.351928 7.3:+27772568 MS.gene51201:CDS
TCTCACTGAGAGCTAATAAC+TGG 0.358828 7.3:+27773107 MS.gene51201:CDS
ATCTCCAAGTGAAATGAATT+AGG 0.360982 7.3:-27773082 None:intergenic
TCATTACCGGCAATAGTTAT+AGG 0.366678 7.3:-27772941 None:intergenic
CTCTCTCCTATAACTATTGC+CGG 0.368867 7.3:+27772935 MS.gene51201:CDS
TTAATGGACTTATTAGTGTA+TGG 0.374000 7.3:+27773359 MS.gene51201:CDS
GGATCTTATCCTACAATTAG+AGG 0.375283 7.3:+27772827 MS.gene51201:CDS
TGGACGAAACAGTTGAGATA+TGG 0.375897 7.3:+27773392 MS.gene51201:CDS
ATTTCCTTGATCACTTCTTC+AGG 0.377843 7.3:-27772551 None:intergenic
GGCAATAATGACACTCCTAT+TGG 0.389582 7.3:-27773242 None:intergenic
CTACATGAACCTCTAATTGT+AGG 0.392008 7.3:-27772836 None:intergenic
ACAATGTAACTTACATTGTC+AGG 0.405161 7.3:+27772969 MS.gene51201:CDS
CATGCTATAAAGACTATGAT+TGG 0.407664 7.3:+27773056 MS.gene51201:CDS
GGTTTCTCTGTCGTGATAAA+CGG 0.419028 7.3:-27773585 None:intergenic
GAGAGCTAATAACTGGAAAC+AGG 0.438075 7.3:+27773114 MS.gene51201:CDS
ACTCTGTATACACGGCCATT+TGG 0.441470 7.3:-27773606 None:intergenic
TTTATAATCAGGAGACCAAT+AGG 0.445906 7.3:+27773227 MS.gene51201:CDS
GCAGATGCGTCTGTAAGTTA+TGG 0.451297 7.3:+27772609 MS.gene51201:CDS
CTCAAAAGGGTAACAGAGTC+GGG 0.460128 7.3:+27773173 MS.gene51201:CDS
GAGTATTACCCAATCTCAAA+AGG 0.462021 7.3:+27773159 MS.gene51201:CDS
ATAACACATGCCTCTACCTA+TGG 0.462032 7.3:+27772879 MS.gene51201:CDS
TGCATTAAAATCTACTGTTA+GGG 0.463323 7.3:-27772750 None:intergenic
TGTCATTTCCTTTAAATCAA+AGG 0.469429 7.3:-27773263 None:intergenic
ATAGTCTTTATAGCATGTAT+AGG 0.473394 7.3:-27773050 None:intergenic
TAAACTTGATCAGTGCCTCT+AGG 0.482054 7.3:-27773643 None:intergenic
AAACAATCGTCTTGAGGAGC+CGG 0.482705 7.3:-27773448 None:intergenic
TAACTAATATCAAAATCATC+AGG 0.482815 7.3:-27773304 None:intergenic
ACAAGCTGTGGTGATGTAGT+TGG 0.488736 7.3:+27773487 MS.gene51201:CDS
GGACGAAACAGTTGAGATAT+GGG 0.491745 7.3:+27773393 MS.gene51201:CDS
AGAGTCGGGTTGTTATTGAA+TGG 0.492089 7.3:+27773187 MS.gene51201:CDS
GACAATGTAAGTTACATTGT+CGG 0.493476 7.3:-27772966 None:intergenic
TAATGGACTTATTAGTGTAT+GGG 0.496409 7.3:+27773360 MS.gene51201:CDS
GGTACCTAATTCATTTCACT+TGG 0.505507 7.3:+27773078 MS.gene51201:CDS
CAATTAGAGGTTCATGTAGA+GGG 0.507972 7.3:+27772840 MS.gene51201:CDS
TATGGGTGATGCATTCATCT+TGG 0.513529 7.3:+27773410 MS.gene51201:CDS
ACCGTCAACTGATGATTACT+TGG 0.516257 7.3:+27773015 MS.gene51201:CDS
GATTGGGTAATACTCTCATA+AGG 0.536241 7.3:-27773151 None:intergenic
ATGCTATAAAGACTATGATT+GGG 0.539128 7.3:+27773057 MS.gene51201:CDS
TCTGCCTGAAGAAGTGATCA+AGG 0.539866 7.3:+27772547 MS.gene51201:CDS
TCTCAAAAGGGTAACAGAGT+CGG 0.545570 7.3:+27773172 MS.gene51201:CDS
CAAAATCACAAGTTTATGTG+TGG 0.553844 7.3:-27772690 None:intergenic
GTAGTTGGAACAGATATTCA+AGG 0.558848 7.3:+27773502 MS.gene51201:CDS
TTGAAGAAGTTTAATAACAA+AGG 0.560618 7.3:+27773529 MS.gene51201:CDS
ATCACGACAGAGAAACCAAA+TGG 0.561240 7.3:+27773591 MS.gene51201:CDS
AGTATTACCCAATCTCAAAA+GGG 0.563747 7.3:+27773160 MS.gene51201:CDS
CTAGGATGCTTTACAAGCTG+TGG 0.564715 7.3:+27773475 MS.gene51201:CDS
TACCTATGGAATCCATCCAC+TGG 0.573050 7.3:+27772893 MS.gene51201:CDS
AAACTTGATCAGTGCCTCTA+GGG 0.573545 7.3:-27773642 None:intergenic
ATAAACGGTAACGATAATAG+AGG 0.574003 7.3:-27773570 None:intergenic
ACAATTAGAGGTTCATGTAG+AGG 0.574936 7.3:+27772839 MS.gene51201:CDS
AAAATCACAAGTTTATGTGT+GGG 0.580258 7.3:-27772689 None:intergenic
ACCAAGTAATCATCAGTTGA+CGG 0.580855 7.3:-27773016 None:intergenic
TGGATGGATTCCATAGGTAG+AGG 0.582971 7.3:-27772889 None:intergenic
TGCTTGCTGACACCAGTGGA+TGG 0.590349 7.3:-27772905 None:intergenic
GCAATAGTTATAGGAGAGAG+AGG 0.600390 7.3:-27772932 None:intergenic
CAACGTAGTACAGACTTCAC+CGG 0.609592 7.3:-27772587 None:intergenic
TGATCAAGGAAATTCTGTTG+AGG 0.611211 7.3:+27772561 MS.gene51201:CDS
AAGTTTATGTGTGGGTGATG+AGG 0.617493 7.3:-27772681 None:intergenic
GCAAATACATCAAAATCTAG+AGG 0.617623 7.3:-27773334 None:intergenic
CACCAGTGGATGGATTCCAT+AGG 0.637291 7.3:-27772895 None:intergenic
AAGCAGAGACTCTGTATACA+CGG 0.652046 7.3:-27773614 None:intergenic
GTTGGAACAGATATTCAAGG+TGG 0.676978 7.3:+27773505 MS.gene51201:CDS
TATTTGCTTGCTGACACCAG+TGG 0.685985 7.3:-27772909 None:intergenic
TCTCTGCTTTCACTCCCTAG+AGG 0.710215 7.3:+27773628 MS.gene51201:CDS
AAATGCGAAGTAGCAAAACG+AGG 0.756354 7.3:-27772650 None:intergenic
ATTGTAGGATAAGATCCGTG+AGG 0.760013 7.3:-27772821 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAACTAATATCAAAATCATC+AGG - chr7.3:27773307-27773326 None:intergenic 20.0%
!! TTGAAGAAGTTTAATAACAA+AGG + chr7.3:27773529-27773548 MS.gene51201:CDS 20.0%
!!! TATTGAATGGTTTTATTCAT+TGG + chr7.3:27773200-27773219 MS.gene51201:CDS 20.0%
! AAAATCACAAGTTTATGTGT+GGG - chr7.3:27772692-27772711 None:intergenic 25.0%
! ATAGTCTTTATAGCATGTAT+AGG - chr7.3:27773053-27773072 None:intergenic 25.0%
! ATGCATTAAAATCTACTGTT+AGG - chr7.3:27772754-27772773 None:intergenic 25.0%
! ATGCTATAAAGACTATGATT+GGG + chr7.3:27773057-27773076 MS.gene51201:CDS 25.0%
! TGCATTAAAATCTACTGTTA+GGG - chr7.3:27772753-27772772 None:intergenic 25.0%
! TTTGATGTATTTGCACTTAA+TGG + chr7.3:27773343-27773362 MS.gene51201:CDS 25.0%
!! CATTATTGCCTTTGATTTAA+AGG + chr7.3:27773255-27773274 MS.gene51201:CDS 25.0%
!! TGTCATTTCCTTTAAATCAA+AGG - chr7.3:27773266-27773285 None:intergenic 25.0%
!!! ATGATTACTTGGTAGTTTTT+GGG + chr7.3:27773026-27773045 MS.gene51201:CDS 25.0%
!!! TAATGGACTTATTAGTGTAT+GGG + chr7.3:27773360-27773379 MS.gene51201:CDS 25.0%
!!! TTAATGGACTTATTAGTGTA+TGG + chr7.3:27773359-27773378 MS.gene51201:CDS 25.0%
ACAATGTAACTTACATTGTC+AGG + chr7.3:27772969-27772988 MS.gene51201:CDS 30.0%
AGTATTACCCAATCTCAAAA+GGG + chr7.3:27773160-27773179 MS.gene51201:CDS 30.0%
ATAAACGGTAACGATAATAG+AGG - chr7.3:27773573-27773592 None:intergenic 30.0%
ATCTCCAAGTGAAATGAATT+AGG - chr7.3:27773085-27773104 None:intergenic 30.0%
ATGTAGAGGGTTTCTATTAT+TGG + chr7.3:27772853-27772872 MS.gene51201:CDS 30.0%
CAAAATCACAAGTTTATGTG+TGG - chr7.3:27772693-27772712 None:intergenic 30.0%
CATGCTATAAAGACTATGAT+TGG + chr7.3:27773056-27773075 MS.gene51201:CDS 30.0%
GACAATGTAAGTTACATTGT+CGG - chr7.3:27772969-27772988 None:intergenic 30.0%
GCAAATACATCAAAATCTAG+AGG - chr7.3:27773337-27773356 None:intergenic 30.0%
TTTATAATCAGGAGACCAAT+AGG + chr7.3:27773227-27773246 MS.gene51201:CDS 30.0%
! TACATTGTCAGGATTTTGTA+TGG + chr7.3:27772980-27772999 MS.gene51201:CDS 30.0%
!! GATGATTACTTGGTAGTTTT+TGG + chr7.3:27773025-27773044 MS.gene51201:CDS 30.0%
ACAATTAGAGGTTCATGTAG+AGG + chr7.3:27772839-27772858 MS.gene51201:CDS 35.0%
ACCAAGTAATCATCAGTTGA+CGG - chr7.3:27773019-27773038 None:intergenic 35.0%
AGTGAAAAACAATCGTCTTG+AGG - chr7.3:27773457-27773476 None:intergenic 35.0%
ATTTCCTTGATCACTTCTTC+AGG - chr7.3:27772554-27772573 None:intergenic 35.0%
CAATTAGAGGTTCATGTAGA+GGG + chr7.3:27772840-27772859 MS.gene51201:CDS 35.0%
CTACATGAACCTCTAATTGT+AGG - chr7.3:27772839-27772858 None:intergenic 35.0%
GAGTATTACCCAATCTCAAA+AGG + chr7.3:27773159-27773178 MS.gene51201:CDS 35.0%
GATTGGGTAATACTCTCATA+AGG - chr7.3:27773154-27773173 None:intergenic 35.0%
GGATCTTATCCTACAATTAG+AGG + chr7.3:27772827-27772846 MS.gene51201:CDS 35.0%
GGTACCTAATTCATTTCACT+TGG + chr7.3:27773078-27773097 MS.gene51201:CDS 35.0%
GTAGTTGGAACAGATATTCA+AGG + chr7.3:27773502-27773521 MS.gene51201:CDS 35.0%
TAGTGTATGGGTTTCAGATA+TGG + chr7.3:27773372-27773391 MS.gene51201:CDS 35.0%
TCATTACCGGCAATAGTTAT+AGG - chr7.3:27772944-27772963 None:intergenic 35.0%
TGATCAAGGAAATTCTGTTG+AGG + chr7.3:27772561-27772580 MS.gene51201:CDS 35.0%
! TGTCAGGATTTTGTATGGAT+TGG + chr7.3:27772985-27773004 MS.gene51201:CDS 35.0%
! TTGGACATTTTCTATGCATC+CGG + chr7.3:27773429-27773448 MS.gene51201:CDS 35.0%
!! CAAGACGATTGTTTTTCACT+AGG + chr7.3:27773457-27773476 MS.gene51201:CDS 35.0%
!! TCATTGGCTGGTTTATAATC+AGG + chr7.3:27773216-27773235 MS.gene51201:CDS 35.0%
!!! GAATGGTTTTATTCATTGGC+TGG + chr7.3:27773204-27773223 MS.gene51201:CDS 35.0%
!!! TCTGTTACCCTTTTGAGATT+GGG - chr7.3:27773170-27773189 None:intergenic 35.0%
AAACTTGATCAGTGCCTCTA+GGG - chr7.3:27773645-27773664 None:intergenic 40.0%
AAATGCGAAGTAGCAAAACG+AGG - chr7.3:27772653-27772672 None:intergenic 40.0%
AAGCAGAGACTCTGTATACA+CGG - chr7.3:27773617-27773636 None:intergenic 40.0%
AAGTTTATGTGTGGGTGATG+AGG - chr7.3:27772684-27772703 None:intergenic 40.0%
ACCGTCAACTGATGATTACT+TGG + chr7.3:27773015-27773034 MS.gene51201:CDS 40.0%
ATAACACATGCCTCTACCTA+TGG + chr7.3:27772879-27772898 MS.gene51201:CDS 40.0%
ATCACGACAGAGAAACCAAA+TGG + chr7.3:27773591-27773610 MS.gene51201:CDS 40.0%
ATTGTAGGATAAGATCCGTG+AGG - chr7.3:27772824-27772843 None:intergenic 40.0%
CTCTCTCCTATAACTATTGC+CGG + chr7.3:27772935-27772954 MS.gene51201:CDS 40.0%
GAGAGCTAATAACTGGAAAC+AGG + chr7.3:27773114-27773133 MS.gene51201:CDS 40.0%
GCAATAGTTATAGGAGAGAG+AGG - chr7.3:27772935-27772954 None:intergenic 40.0%
GGACGAAACAGTTGAGATAT+GGG + chr7.3:27773393-27773412 MS.gene51201:CDS 40.0%
GGCAATAATGACACTCCTAT+TGG - chr7.3:27773245-27773264 None:intergenic 40.0%
GGTTTCTCTGTCGTGATAAA+CGG - chr7.3:27773588-27773607 None:intergenic 40.0%
GTTGGAACAGATATTCAAGG+TGG + chr7.3:27773505-27773524 MS.gene51201:CDS 40.0%
TAAACTTGATCAGTGCCTCT+AGG - chr7.3:27773646-27773665 None:intergenic 40.0%
TACATTGTCGGCATCATTAC+CGG - chr7.3:27772957-27772976 None:intergenic 40.0%
TATGGGTGATGCATTCATCT+TGG + chr7.3:27773410-27773429 MS.gene51201:CDS 40.0%
TCTCAAAAGGGTAACAGAGT+CGG + chr7.3:27773172-27773191 MS.gene51201:CDS 40.0%
TCTCACTGAGAGCTAATAAC+TGG + chr7.3:27773107-27773126 MS.gene51201:CDS 40.0%
TGGACGAAACAGTTGAGATA+TGG + chr7.3:27773392-27773411 MS.gene51201:CDS 40.0%
! AGAGTCGGGTTGTTATTGAA+TGG + chr7.3:27773187-27773206 MS.gene51201:CDS 40.0%
!!! CTCTGTTACCCTTTTGAGAT+TGG - chr7.3:27773171-27773190 None:intergenic 40.0%
AAACAATCGTCTTGAGGAGC+CGG - chr7.3:27773451-27773470 None:intergenic 45.0%
ACTCTGTATACACGGCCATT+TGG - chr7.3:27773609-27773628 None:intergenic 45.0%
ATCCGTGAGGCAAAAAAGCA+AGG - chr7.3:27772811-27772830 None:intergenic 45.0%
CAACGTAGTACAGACTTCAC+CGG - chr7.3:27772590-27772609 None:intergenic 45.0%
CTAGGATGCTTTACAAGCTG+TGG + chr7.3:27773475-27773494 MS.gene51201:CDS 45.0%
CTCAAAAGGGTAACAGAGTC+GGG + chr7.3:27773173-27773192 MS.gene51201:CDS 45.0%
GCAGATGCGTCTGTAAGTTA+TGG + chr7.3:27772609-27772628 MS.gene51201:CDS 45.0%
GGAAATTCTGTTGAGGTTGC+CGG + chr7.3:27772568-27772587 MS.gene51201:CDS 45.0%
TACCTATGGAATCCATCCAC+TGG + chr7.3:27772893-27772912 MS.gene51201:CDS 45.0%
TCTGCCTGAAGAAGTGATCA+AGG + chr7.3:27772547-27772566 MS.gene51201:CDS 45.0%
! ACAAGCTGTGGTGATGTAGT+TGG + chr7.3:27773487-27773506 MS.gene51201:CDS 45.0%
! TATTTGCTTGCTGACACCAG+TGG - chr7.3:27772912-27772931 None:intergenic 45.0%
! TGGATGGATTCCATAGGTAG+AGG - chr7.3:27772892-27772911 None:intergenic 45.0%
!!! AGCCTTGCTTTTTTGCCTCA+CGG + chr7.3:27772806-27772825 MS.gene51201:CDS 45.0%
TCTCTGCTTTCACTCCCTAG+AGG + chr7.3:27773628-27773647 MS.gene51201:CDS 50.0%
! CACCAGTGGATGGATTCCAT+AGG - chr7.3:27772898-27772917 None:intergenic 50.0%
! TGCTTGCTGACACCAGTGGA+TGG - chr7.3:27772908-27772927 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 27772527 27773666 27772527 ID=MS.gene51201
chr7.3 mRNA 27772527 27773666 27772527 ID=MS.gene51201.t1;Parent=MS.gene51201
chr7.3 exon 27772527 27773666 27772527 ID=MS.gene51201.t1.exon1;Parent=MS.gene51201.t1
chr7.3 CDS 27772527 27773666 27772527 ID=cds.MS.gene51201.t1;Parent=MS.gene51201.t1
Gene Sequence

>MS.gene51201

ATGGCGAAGAAGAGTGTGTATCTGCCTGAAGAAGTGATCAAGGAAATTCTGTTGAGGTTGCCGGTGAAGTCTGTACTACGTTGCAGATGCGTCTGTAAGTTATGGCTTTCTATCATCTCTCATCCTCGTTTTGCTACTTCGCATTTTCAACTTGCCTCATCACCCACACATAAACTTGTGATTTTGAGACAGTATAGTCGTTTAAAAGCTTATAAACATGAAGCCCTAACAGTAGATTTTAATGCATCGCTCAACGATGATTCTGCTTATCATTCACTAAGCCTTGCTTTTTTGCCTCACGGATCTTATCCTACAATTAGAGGTTCATGTAGAGGGTTTCTATTATTGGACTATAACACATGCCTCTACCTATGGAATCCATCCACTGGTGTCAGCAAGCAAATACCTCTCTCTCCTATAACTATTGCCGGTAATGATGCCGACAATGTAACTTACATTGTCAGGATTTTGTATGGATTGGCATATGAACCGTCAACTGATGATTACTTGGTAGTTTTTGGGTCCTATACATGCTATAAAGACTATGATTGGGTACCTAATTCATTTCACTTGGAGATTTTCTCACTGAGAGCTAATAACTGGAAACAGGTTGCTTCTCATTTGCCTTATGAGAGTATTACCCAATCTCAAAAGGGTAACAGAGTCGGGTTGTTATTGAATGGTTTTATTCATTGGCTGGTTTATAATCAGGAGACCAATAGGAGTGTCATTATTGCCTTTGATTTAAAGGAAATGACACTGTCAGAGATAGCTCTTCCTGATGATTTTGATATTAGTTATGATTCTCCTCTAGATTTTGATGTATTTGCACTTAATGGACTTATTAGTGTATGGGTTTCAGATATGGACGAAACAGTTGAGATATGGGTGATGCATTCATCTTGGACATTTTCTATGCATCCGGCTCCTCAAGACGATTGTTTTTCACTAGGATGCTTTACAAGCTGTGGTGATGTAGTTGGAACAGATATTCAAGGTGGATTGAAGAAGTTTAATAACAAAGGACAGCTGCTAGAACATCACCTCTATTATCGTTACCGTTTATCACGACAGAGAAACCAAATGGCCGTGTATACAGAGTCTCTGCTTTCACTCCCTAGAGGCACTGATCAAGTTTAA

Protein sequence

>MS.gene51201.t1

MAKKSVYLPEEVIKEILLRLPVKSVLRCRCVCKLWLSIISHPRFATSHFQLASSPTHKLVILRQYSRLKAYKHEALTVDFNASLNDDSAYHSLSLAFLPHGSYPTIRGSCRGFLLLDYNTCLYLWNPSTGVSKQIPLSPITIAGNDADNVTYIVRILYGLAYEPSTDDYLVVFGSYTCYKDYDWVPNSFHLEIFSLRANNWKQVASHLPYESITQSQKGNRVGLLLNGFIHWLVYNQETNRSVIIAFDLKEMTLSEIALPDDFDISYDSPLDFDVFALNGLISVWVSDMDETVEIWVMHSSWTFSMHPAPQDDCFSLGCFTSCGDVVGTDIQGGLKKFNNKGQLLEHHLYYRYRLSRQRNQMAVYTESLLSLPRGTDQV