Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0758860 | sp|Q05753|AKRP_ARATH | 53.066 | 424 | 184 | 6 | 23 | 436 | 7 | 425 | 4.69e-150 | 436 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0758860 | A0A396HR11 | 91.031 | 446 | 29 | 4 | 1 | 442 | 1 | 439 | 0.0 | 781 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001950 | Msa0758860 | 0.802521 | 5.393140e-49 | -8.615850e-47 |
Msa0003470 | Msa0758860 | 0.847676 | 9.944632e-60 | -8.615850e-47 |
Msa0007450 | Msa0758860 | 0.810340 | 1.209994e-50 | -8.615850e-47 |
Msa0008850 | Msa0758860 | 0.825055 | 5.775633e-54 | -8.615850e-47 |
Msa0017120 | Msa0758860 | 0.842676 | 2.235306e-58 | -8.615850e-47 |
Msa0017940 | Msa0758860 | 0.803350 | 3.635642e-49 | -8.615850e-47 |
Msa0021300 | Msa0758860 | 0.811615 | 6.408971e-51 | -8.615850e-47 |
Msa0024680 | Msa0758860 | 0.813451 | 2.542534e-51 | -8.615850e-47 |
Msa0027540 | Msa0758860 | 0.852322 | 4.980445e-61 | -8.615850e-47 |
Msa0030000 | Msa0758860 | 0.840926 | 6.478409e-58 | -8.615850e-47 |
Msa0037820 | Msa0758860 | 0.815992 | 6.956537e-52 | -8.615850e-47 |
Msa0041540 | Msa0758860 | 0.801298 | 9.617832e-49 | -8.615850e-47 |
Msa0043680 | Msa0758860 | 0.800595 | 1.338676e-48 | -8.615850e-47 |
Msa0043940 | Msa0758860 | 0.804460 | 2.136976e-49 | -8.615850e-47 |
Msa0047470 | Msa0758860 | 0.827237 | 1.747831e-54 | -8.615850e-47 |
Msa0048020 | Msa0758860 | 0.805193 | 1.501997e-49 | -8.615850e-47 |
Msa0050430 | Msa0758860 | 0.824869 | 6.389195e-54 | -8.615850e-47 |
Msa0050720 | Msa0758860 | 0.806179 | 9.328003e-50 | -8.615850e-47 |
Msa0055280 | Msa0758860 | 0.808376 | 3.192419e-50 | -8.615850e-47 |
Msa0065390 | Msa0758860 | 0.816381 | 5.694076e-52 | -8.615850e-47 |
Msa0068410 | Msa0758860 | 0.831648 | 1.482150e-55 | -8.615850e-47 |
Msa0075310 | Msa0758860 | 0.857577 | 1.484650e-62 | -8.615850e-47 |
Msa0078090 | Msa0758860 | 0.814458 | 1.525059e-51 | -8.615850e-47 |
Msa0079250 | Msa0758860 | 0.805929 | 1.052788e-49 | -8.615850e-47 |
Msa0083160 | Msa0758860 | 0.837292 | 5.664878e-57 | -8.615850e-47 |
Msa0084680 | Msa0758860 | 0.851647 | 7.746021e-61 | -8.615850e-47 |
Msa0089210 | Msa0758860 | 0.811286 | 7.552854e-51 | -8.615850e-47 |
Msa0091480 | Msa0758860 | 0.823515 | 1.328871e-53 | -8.615850e-47 |
Msa0092180 | Msa0758860 | 0.801427 | 9.052664e-49 | -8.615850e-47 |
Msa0092660 | Msa0758860 | 0.818371 | 2.029637e-52 | -8.615850e-47 |
Msa0092710 | Msa0758860 | 0.805361 | 1.385627e-49 | -8.615850e-47 |
Msa0092730 | Msa0758860 | 0.819842 | 9.390045e-53 | -8.615850e-47 |
Msa0094420 | Msa0758860 | 0.809665 | 1.691474e-50 | -8.615850e-47 |
Msa0107460 | Msa0758860 | 0.810302 | 1.233317e-50 | -8.615850e-47 |
Msa0110710 | Msa0758860 | 0.815347 | 9.685853e-52 | -8.615850e-47 |
Msa0606060 | Msa0758860 | 0.807577 | 4.721573e-50 | -8.615850e-47 |
Msa0607280 | Msa0758860 | 0.837261 | 5.769143e-57 | -8.615850e-47 |
Msa0614040 | Msa0758860 | 0.806793 | 6.920541e-50 | -8.615850e-47 |
Msa0614230 | Msa0758860 | 0.839240 | 1.784023e-57 | -8.615850e-47 |
Msa0618010 | Msa0758860 | 0.813346 | 2.682013e-51 | -8.615850e-47 |
Msa0619330 | Msa0758860 | 0.834188 | 3.462763e-56 | -8.615850e-47 |
Msa0619930 | Msa0758860 | 0.813203 | 2.882236e-51 | -8.615850e-47 |
Msa0620640 | Msa0758860 | 0.825346 | 4.927413e-54 | -8.615850e-47 |
Msa0623270 | Msa0758860 | 0.809767 | 1.607764e-50 | -8.615850e-47 |
Msa0628060 | Msa0758860 | 0.804964 | 1.677759e-49 | -8.615850e-47 |
Msa0638710 | Msa0758860 | 0.831922 | 1.268084e-55 | -8.615850e-47 |
Msa0640880 | Msa0758860 | 0.836713 | 7.963456e-57 | -8.615850e-47 |
Msa0642650 | Msa0758860 | 0.873337 | 1.589569e-67 | -8.615850e-47 |
Msa0646390 | Msa0758860 | 0.814823 | 1.266022e-51 | -8.615850e-47 |
Msa0649310 | Msa0758860 | 0.816223 | 6.179082e-52 | -8.615850e-47 |
Msa0654060 | Msa0758860 | 0.841794 | 3.827897e-58 | -8.615850e-47 |
Msa0667970 | Msa0758860 | 0.821300 | 4.343868e-53 | -8.615850e-47 |
Msa0669200 | Msa0758860 | 0.805110 | 1.563946e-49 | -8.615850e-47 |
Msa0673610 | Msa0758860 | 0.831972 | 1.232419e-55 | -8.615850e-47 |
Msa0681890 | Msa0758860 | 0.872115 | 4.075972e-67 | -8.615850e-47 |
Msa0682400 | Msa0758860 | 0.813895 | 2.030192e-51 | -8.615850e-47 |
Msa0685380 | Msa0758860 | -0.804225 | 2.392217e-49 | -8.615850e-47 |
Msa0686610 | Msa0758860 | 0.816020 | 6.856720e-52 | -8.615850e-47 |
Msa0690350 | Msa0758860 | 0.823836 | 1.117439e-53 | -8.615850e-47 |
Msa0690720 | Msa0758860 | 0.828997 | 6.585292e-55 | -8.615850e-47 |
Msa0693570 | Msa0758860 | 0.801288 | 9.664698e-49 | -8.615850e-47 |
Msa0703760 | Msa0758860 | 0.820337 | 7.234870e-53 | -8.615850e-47 |
Msa0707780 | Msa0758860 | 0.834383 | 3.094196e-56 | -8.615850e-47 |
Msa0709480 | Msa0758860 | 0.826407 | 2.759150e-54 | -8.615850e-47 |
Msa0717090 | Msa0758860 | 0.821671 | 3.566456e-53 | -8.615850e-47 |
Msa0717510 | Msa0758860 | 0.857711 | 1.355386e-62 | -8.615850e-47 |
Msa0719340 | Msa0758860 | 0.836147 | 1.109359e-56 | -8.615850e-47 |
Msa0720270 | Msa0758860 | 0.821532 | 3.840035e-53 | -8.615850e-47 |
Msa0725920 | Msa0758860 | 0.802968 | 4.360594e-49 | -8.615850e-47 |
Msa0726440 | Msa0758860 | 0.826022 | 3.406988e-54 | -8.615850e-47 |
Msa0726610 | Msa0758860 | 0.808170 | 3.532678e-50 | -8.615850e-47 |
Msa0730180 | Msa0758860 | 0.827856 | 1.241737e-54 | -8.615850e-47 |
Msa0733000 | Msa0758860 | 0.807587 | 4.699457e-50 | -8.615850e-47 |
Msa0738850 | Msa0758860 | 0.804793 | 1.821759e-49 | -8.615850e-47 |
Msa0743640 | Msa0758860 | 0.801377 | 9.268640e-49 | -8.615850e-47 |
Msa0758860 | Msa0763880 | 0.801182 | 1.015781e-48 | -8.615850e-47 |
Msa0758860 | Msa0772150 | 0.812002 | 5.276922e-51 | -8.615850e-47 |
Msa0758860 | Msa0775260 | 0.809219 | 2.107919e-50 | -8.615850e-47 |
Msa0758860 | Msa0780140 | 0.835333 | 1.784098e-56 | -8.615850e-47 |
Msa0758860 | Msa0790830 | 0.812528 | 4.051409e-51 | -8.615850e-47 |
Msa0758860 | Msa0797220 | 0.804118 | 2.518153e-49 | -8.615850e-47 |
Msa0758860 | Msa0802210 | 0.817028 | 4.077695e-52 | -8.615850e-47 |
Msa0758860 | Msa0803130 | 0.852499 | 4.435230e-61 | -8.615850e-47 |
Msa0758860 | Msa0807730 | 0.831320 | 1.784312e-55 | -8.615850e-47 |
Msa0758860 | Msa0808420 | 0.804615 | 1.984245e-49 | -8.615850e-47 |
Msa0758860 | Msa0811510 | 0.847080 | 1.449701e-59 | -8.615850e-47 |
Msa0758860 | Msa0812660 | 0.822069 | 2.884697e-53 | -8.615850e-47 |
Msa0758860 | Msa0824140 | 0.803750 | 3.003115e-49 | -8.615850e-47 |
Msa0758860 | Msa0841490 | 0.847599 | 1.044539e-59 | -8.615850e-47 |
Msa0758860 | Msa0851740 | 0.831798 | 1.360743e-55 | -8.615850e-47 |
Msa0758860 | Msa0863250 | 0.817193 | 3.743655e-52 | -8.615850e-47 |
Msa0758860 | Msa0877420 | 0.807144 | 5.834864e-50 | -8.615850e-47 |
Msa0758860 | Msa0884730 | 0.805870 | 1.083583e-49 | -8.615850e-47 |
Msa0758860 | Msa0890250 | 0.867320 | 1.492571e-65 | -8.615850e-47 |
Msa0758860 | Msa0899700 | 0.810031 | 1.410838e-50 | -8.615850e-47 |
Msa0758860 | Msa0900320 | 0.800964 | 1.125512e-48 | -8.615850e-47 |
Msa0758860 | Msa0907700 | 0.837690 | 4.479547e-57 | -8.615850e-47 |
Msa0758860 | Msa0909710 | 0.824865 | 6.402445e-54 | -8.615850e-47 |
Msa0758860 | Msa0910400 | 0.800086 | 1.699330e-48 | -8.615850e-47 |
Msa0758860 | Msa0922540 | 0.816049 | 6.757446e-52 | -8.615850e-47 |
Msa0758860 | Msa0925160 | 0.852039 | 5.993322e-61 | -8.615850e-47 |
Msa0758860 | Msa0931610 | 0.818925 | 1.519714e-52 | -8.615850e-47 |
Msa0758860 | Msa0934830 | 0.817622 | 2.997659e-52 | -8.615850e-47 |
Msa0758860 | Msa0935730 | 0.822670 | 2.091657e-53 | -8.615850e-47 |
Msa0758860 | Msa0937940 | 0.801543 | 8.570042e-49 | -8.615850e-47 |
Msa0758860 | Msa0942730 | 0.804347 | 2.256284e-49 | -8.615850e-47 |
Msa0758860 | Msa0955260 | 0.845252 | 4.560944e-59 | -8.615850e-47 |
Msa0758860 | Msa0958020 | 0.842101 | 3.176538e-58 | -8.615850e-47 |
Msa0758860 | Msa0971860 | 0.825091 | 5.662867e-54 | -8.615850e-47 |
Msa0758860 | Msa0975080 | 0.803912 | 2.779641e-49 | -8.615850e-47 |
Msa0758860 | Msa0990520 | 0.827683 | 1.366152e-54 | -8.615850e-47 |
Msa0758860 | Msa0992570 | 0.806171 | 9.361347e-50 | -8.615850e-47 |
Msa0758860 | Msa0992590 | 0.812891 | 3.374512e-51 | -8.615850e-47 |
Msa0758860 | Msa0996090 | 0.805533 | 1.275228e-49 | -8.615850e-47 |
Msa0758860 | Msa1000470 | 0.804710 | 1.895422e-49 | -8.615850e-47 |
Msa0758860 | Msa1001780 | 0.823627 | 1.251044e-53 | -8.615850e-47 |
Msa0758860 | Msa1002040 | 0.832736 | 7.973401e-56 | -8.615850e-47 |
Msa0758860 | Msa1004500 | 0.825589 | 4.315794e-54 | -8.615850e-47 |
Msa0758860 | Msa1004520 | 0.803061 | 4.172256e-49 | -8.615850e-47 |
Msa0758860 | Msa1022310 | 0.810478 | 1.130063e-50 | -8.615850e-47 |
Msa0758860 | Msa1024580 | 0.819635 | 1.047471e-52 | -8.615850e-47 |
Msa0758860 | Msa1027790 | 0.805858 | 1.089491e-49 | -8.615850e-47 |
Msa0758860 | Msa1028460 | 0.814662 | 1.374546e-51 | -8.615850e-47 |
Msa0758860 | Msa1029320 | 0.803220 | 3.867048e-49 | -8.615850e-47 |
Msa0758860 | Msa1038320 | 0.820421 | 6.920237e-53 | -8.615850e-47 |
Msa0758860 | Msa1044040 | 0.814563 | 1.445707e-51 | -8.615850e-47 |
Msa0758860 | Msa1044340 | 0.827228 | 1.756708e-54 | -8.615850e-47 |
Msa0758860 | Msa1046870 | 0.821484 | 3.940798e-53 | -8.615850e-47 |
Msa0758860 | Msa1058010 | 0.807370 | 5.224712e-50 | -8.615850e-47 |
Msa0758860 | Msa1061180 | 0.818265 | 2.145026e-52 | -8.615850e-47 |
Msa0758860 | Msa1069300 | 0.811664 | 6.251019e-51 | -8.615850e-47 |
Msa0758860 | Msa1073840 | 0.819470 | 1.141910e-52 | -8.615850e-47 |
Msa0758860 | Msa1082820 | -0.807909 | 4.013760e-50 | -8.615850e-47 |
Msa0758860 | Msa1084490 | 0.806550 | 7.788830e-50 | -8.615850e-47 |
Msa0758860 | Msa1089530 | 0.830141 | 3.470293e-55 | -8.615850e-47 |
Msa0758860 | Msa1100490 | 0.820912 | 5.338822e-53 | -8.615850e-47 |
Msa0758860 | Msa1106560 | 0.827157 | 1.826407e-54 | -8.615850e-47 |
Msa0758860 | Msa1107970 | 0.806998 | 6.263310e-50 | -8.615850e-47 |
Msa0758860 | Msa1112610 | 0.802668 | 5.029619e-49 | -8.615850e-47 |
Msa0758860 | Msa1115580 | 0.802833 | 4.651251e-49 | -8.615850e-47 |
Msa0758860 | Msa1125780 | 0.817277 | 3.585198e-52 | -8.615850e-47 |
Msa0758860 | Msa1125950 | 0.817498 | 3.195970e-52 | -8.615850e-47 |
Msa0758860 | Msa1129720 | 0.800320 | 1.522980e-48 | -8.615850e-47 |
Msa0758860 | Msa1131470 | 0.850083 | 2.135788e-60 | -8.615850e-47 |
Msa0758860 | Msa1159100 | 0.820970 | 5.176369e-53 | -8.615850e-47 |
Msa0758860 | Msa1166180 | 0.829203 | 5.869232e-55 | -8.615850e-47 |
Msa0758860 | Msa1166280 | 0.823215 | 1.561278e-53 | -8.615850e-47 |
Msa0758860 | Msa1171340 | 0.828809 | 7.312936e-55 | -8.615850e-47 |
Msa0758860 | Msa1177240 | 0.807744 | 4.351409e-50 | -8.615850e-47 |
Msa0758860 | Msa1183390 | 0.819551 | 1.094484e-52 | -8.615850e-47 |
Msa0758860 | Msa1183610 | 0.830025 | 3.705430e-55 | -8.615850e-47 |
Msa0758860 | Msa1197110 | 0.801249 | 9.843578e-49 | -8.615850e-47 |
Msa0758860 | Msa1198450 | 0.817542 | 3.123699e-52 | -8.615850e-47 |
Msa0758860 | Msa1210640 | 0.805099 | 1.571672e-49 | -8.615850e-47 |
Msa0758860 | Msa1210770 | 0.848486 | 5.945786e-60 | -8.615850e-47 |
Msa0758860 | Msa1211070 | 0.809694 | 1.667171e-50 | -8.615850e-47 |
Msa0758860 | Msa1220450 | -0.805759 | 1.142874e-49 | -8.615850e-47 |
Msa0758860 | Msa1220460 | -0.803210 | 3.886233e-49 | -8.615850e-47 |
Msa0758860 | Msa1220480 | -0.802519 | 5.399593e-49 | -8.615850e-47 |
Msa0758860 | Msa1220740 | 0.814607 | 1.413869e-51 | -8.615850e-47 |
Msa0758860 | Msa1223840 | 0.847354 | 1.219197e-59 | -8.615850e-47 |
Msa0758860 | Msa1224670 | 0.855006 | 8.424959e-62 | -8.615850e-47 |
Msa0758860 | Msa1226600 | 0.806083 | 9.771275e-50 | -8.615850e-47 |
Msa0758860 | Msa1229660 | 0.817483 | 3.221511e-52 | -8.615850e-47 |
Msa0758860 | Msa1229700 | 0.800475 | 1.416541e-48 | -8.615850e-47 |
Msa0758860 | Msa1237030 | 0.840708 | 7.391076e-58 | -8.615850e-47 |
Msa0758860 | Msa1238710 | 0.800564 | 1.358610e-48 | -8.615850e-47 |
Msa0758860 | Msa1262310 | 0.813824 | 2.104585e-51 | -8.615850e-47 |
Msa0758860 | Msa1263030 | 0.859733 | 3.372011e-63 | -8.615850e-47 |
Msa0758860 | Msa1263590 | 0.809603 | 1.744253e-50 | -8.615850e-47 |
Msa0758860 | Msa1263670 | 0.808194 | 3.491098e-50 | -8.615850e-47 |
Msa0758860 | Msa1265960 | 0.801654 | 8.130048e-49 | -8.615850e-47 |
Msa0758860 | Msa1271510 | 0.817926 | 2.559084e-52 | -8.615850e-47 |
Msa0758860 | Msa1271600 | 0.813599 | 2.359423e-51 | -8.615850e-47 |
Msa0758860 | Msa1280130 | 0.807247 | 5.549782e-50 | -8.615850e-47 |
Msa0758860 | Msa1284030 | 0.834960 | 2.214790e-56 | -8.615850e-47 |
Msa0758860 | Msa1293530 | 0.815649 | 8.295394e-52 | -8.615850e-47 |
Msa0758860 | Msa1299160 | 0.817760 | 2.789524e-52 | -8.615850e-47 |
Msa0758860 | Msa1309360 | 0.807585 | 4.705299e-50 | -8.615850e-47 |
Msa0758860 | Msa1310290 | 0.811388 | 7.178150e-51 | -8.615850e-47 |
Msa0758860 | Msa1310340 | 0.830653 | 2.601931e-55 | -8.615850e-47 |
Msa0758860 | Msa1323060 | 0.834369 | 3.120045e-56 | -8.615850e-47 |
Msa0758860 | Msa1325980 | 0.807451 | 5.021940e-50 | -8.615850e-47 |
Msa0758860 | Msa1327820 | 0.813593 | 2.366095e-51 | -8.615850e-47 |
Msa0758860 | Msa1328850 | 0.802073 | 6.670082e-49 | -8.615850e-47 |
Msa0758860 | Msa1334650 | 0.809581 | 1.763088e-50 | -8.615850e-47 |
Msa0758860 | Msa1349360 | 0.823261 | 1.523366e-53 | -8.615850e-47 |
Msa0758860 | Msa1352290 | 0.806128 | 9.561543e-50 | -8.615850e-47 |
Msa0758860 | Msa1354040 | 0.805255 | 1.458205e-49 | -8.615850e-47 |
Msa0758860 | Msa1365870 | 0.806548 | 7.798369e-50 | -8.615850e-47 |
Msa0758860 | Msa1368730 | 0.808870 | 2.503565e-50 | -8.615850e-47 |
Msa0758860 | Msa1373510 | 0.809962 | 1.459547e-50 | -8.615850e-47 |
Msa0758860 | Msa1375630 | 0.805744 | 1.151259e-49 | -8.615850e-47 |
Msa0758860 | Msa1376350 | 0.800554 | 1.365009e-48 | -8.615850e-47 |
Msa0758860 | Msa1376530 | 0.809564 | 1.777477e-50 | -8.615850e-47 |
Msa0758860 | Msa1376640 | 0.817872 | 2.631629e-52 | -8.615850e-47 |
Msa0758860 | Msa1381130 | 0.857527 | 1.536485e-62 | -8.615850e-47 |
Msa0758860 | Msa1382720 | 0.816241 | 6.119598e-52 | -8.615850e-47 |
Msa0758860 | Msa1385620 | 0.804681 | 1.922564e-49 | -8.615850e-47 |
Msa0758860 | Msa1385900 | 0.800564 | 1.358463e-48 | -8.615850e-47 |
Msa0758860 | Msa1397970 | 0.802405 | 5.698944e-49 | -8.615850e-47 |
Msa0758860 | Msa1405770 | 0.822528 | 2.256857e-53 | -8.615850e-47 |
Msa0758860 | Msa1406230 | 0.800979 | 1.118004e-48 | -8.615850e-47 |
Msa0758860 | Msa1407710 | 0.815217 | 1.035152e-51 | -8.615850e-47 |
Msa0758860 | Msa1410170 | 0.816486 | 5.395747e-52 | -8.615850e-47 |
Msa0758860 | Msa1412080 | 0.806814 | 6.851247e-50 | -8.615850e-47 |
Msa0758860 | Msa1418200 | 0.828626 | 8.095714e-55 | -8.615850e-47 |
Msa0758860 | Msa1423190 | 0.805088 | 1.580475e-49 | -8.615850e-47 |
Msa0758860 | Msa1428420 | 0.809745 | 1.625321e-50 | -8.615850e-47 |
Msa0758860 | Msa1430270 | 0.827797 | 1.282664e-54 | -8.615850e-47 |
Msa0758860 | Msa1431000 | 0.802819 | 4.681434e-49 | -8.615850e-47 |
Msa0758860 | Msa1431730 | 0.839039 | 2.010566e-57 | -8.615850e-47 |
Msa0758860 | Msa1432640 | 0.801713 | 7.906335e-49 | -8.615850e-47 |
Msa0758860 | Msa1435470 | 0.808607 | 2.849885e-50 | -8.615850e-47 |
Msa0758860 | Msa1435910 | 0.803250 | 3.812290e-49 | -8.615850e-47 |
Msa0758860 | Msa1439120 | 0.801539 | 8.585641e-49 | -8.615850e-47 |
Msa0758860 | Msa1440180 | 0.813363 | 2.658224e-51 | -8.615850e-47 |
Msa0758860 | Msa1440610 | 0.803431 | 3.498449e-49 | -8.615850e-47 |
Msa0758860 | Msa1444450 | 0.823185 | 1.586853e-53 | -8.615850e-47 |
Msa0758860 | Msa1447230 | 0.801884 | 7.294368e-49 | -8.615850e-47 |
Msa0758860 | Msa1449740 | 0.812696 | 3.723628e-51 | -8.615850e-47 |
Msa0758860 | Msa1449880 | 0.824057 | 9.916726e-54 | -8.615850e-47 |
Msa0758860 | Msa1450020 | 0.801724 | 7.864935e-49 | -8.615850e-47 |
Msa0758860 | Msa1451840 | 0.803995 | 2.670762e-49 | -8.615850e-47 |
Msa0758860 | Msa1454110 | 0.801818 | 7.524904e-49 | -8.615850e-47 |
Msa0758860 | Msa1455660 | 0.802891 | 4.523559e-49 | -8.615850e-47 |
Msa0758860 | Msa1456650 | 0.815289 | 9.976939e-52 | -8.615850e-47 |
Msa0758860 | Msa1458920 | 0.839296 | 1.724889e-57 | -8.615850e-47 |
Msa0123170 | Msa0758860 | 0.802230 | 6.191892e-49 | -8.615850e-47 |
Msa0125230 | Msa0758860 | 0.824513 | 7.748117e-54 | -8.615850e-47 |
Msa0130800 | Msa0758860 | 0.842801 | 2.071023e-58 | -8.615850e-47 |
Msa0132590 | Msa0758860 | -0.801496 | 8.761566e-49 | -8.615850e-47 |
Msa0135980 | Msa0758860 | 0.832091 | 1.151978e-55 | -8.615850e-47 |
Msa0137600 | Msa0758860 | 0.808312 | 3.293975e-50 | -8.615850e-47 |
Msa0139900 | Msa0758860 | 0.806629 | 7.496391e-50 | -8.615850e-47 |
Msa0141430 | Msa0758860 | 0.802522 | 5.389917e-49 | -8.615850e-47 |
Msa0141670 | Msa0758860 | 0.821691 | 3.528377e-53 | -8.615850e-47 |
Msa0141830 | Msa0758860 | 0.821471 | 3.967436e-53 | -8.615850e-47 |
Msa0142870 | Msa0758860 | 0.800604 | 1.333318e-48 | -8.615850e-47 |
Msa0143080 | Msa0758860 | 0.812557 | 3.992239e-51 | -8.615850e-47 |
Msa0143970 | Msa0758860 | 0.802116 | 6.536626e-49 | -8.615850e-47 |
Msa0146470 | Msa0758860 | 0.838348 | 3.033656e-57 | -8.615850e-47 |
Msa0157020 | Msa0758860 | 0.834888 | 2.309232e-56 | -8.615850e-47 |
Msa0168100 | Msa0758860 | 0.847083 | 1.447589e-59 | -8.615850e-47 |
Msa0177280 | Msa0758860 | 0.802088 | 6.622963e-49 | -8.615850e-47 |
Msa0182930 | Msa0758860 | 0.809797 | 1.584334e-50 | -8.615850e-47 |
Msa0183610 | Msa0758860 | 0.820860 | 5.486564e-53 | -8.615850e-47 |
Msa0183620 | Msa0758860 | 0.820305 | 7.359587e-53 | -8.615850e-47 |
Msa0185390 | Msa0758860 | 0.866048 | 3.788747e-65 | -8.615850e-47 |
Msa0197900 | Msa0758860 | 0.808543 | 2.940693e-50 | -8.615850e-47 |
Msa0200970 | Msa0758860 | 0.818514 | 1.884109e-52 | -8.615850e-47 |
Msa0203520 | Msa0758860 | 0.801074 | 1.068940e-48 | -8.615850e-47 |
Msa0207000 | Msa0758860 | 0.846286 | 2.388676e-59 | -8.615850e-47 |
Msa0218860 | Msa0758860 | 0.810972 | 8.833233e-51 | -8.615850e-47 |
Msa0222070 | Msa0758860 | 0.835724 | 1.420643e-56 | -8.615850e-47 |
Msa0222120 | Msa0758860 | 0.838661 | 2.518896e-57 | -8.615850e-47 |
Msa0223280 | Msa0758860 | 0.821187 | 4.613471e-53 | -8.615850e-47 |
Msa0223390 | Msa0758860 | 0.829266 | 5.665841e-55 | -8.615850e-47 |
Msa0227290 | Msa0758860 | 0.803556 | 3.294506e-49 | -8.615850e-47 |
Msa0227500 | Msa0758860 | 0.807305 | 5.394999e-50 | -8.615850e-47 |
Msa0230400 | Msa0758860 | 0.809132 | 2.200667e-50 | -8.615850e-47 |
Msa0236980 | Msa0758860 | 0.808372 | 3.199207e-50 | -8.615850e-47 |
Msa0367370 | Msa0758860 | 0.818044 | 2.407220e-52 | -8.615850e-47 |
Msa0367490 | Msa0758860 | 0.814471 | 1.514975e-51 | -8.615850e-47 |
Msa0373950 | Msa0758860 | 0.805310 | 1.420112e-49 | -8.615850e-47 |
Msa0378340 | Msa0758860 | 0.804322 | 2.283518e-49 | -8.615850e-47 |
Msa0380310 | Msa0758860 | 0.823549 | 1.304594e-53 | -8.615850e-47 |
Msa0380420 | Msa0758860 | 0.807524 | 4.846604e-50 | -8.615850e-47 |
Msa0382500 | Msa0758860 | 0.819929 | 8.970086e-53 | -8.615850e-47 |
Msa0411560 | Msa0758860 | 0.808938 | 2.421339e-50 | -8.615850e-47 |
Msa0413740 | Msa0758860 | 0.807943 | 3.947452e-50 | -8.615850e-47 |
Msa0417150 | Msa0758860 | 0.818485 | 1.913076e-52 | -8.615850e-47 |
Msa0417630 | Msa0758860 | 0.834640 | 2.667393e-56 | -8.615850e-47 |
Msa0421800 | Msa0758860 | 0.806149 | 9.465796e-50 | -8.615850e-47 |
Msa0427690 | Msa0758860 | 0.803132 | 4.033552e-49 | -8.615850e-47 |
Msa0431430 | Msa0758860 | 0.802310 | 5.962623e-49 | -8.615850e-47 |
Msa0431520 | Msa0758860 | 0.812552 | 4.003806e-51 | -8.615850e-47 |
Msa0431830 | Msa0758860 | 0.821779 | 3.366949e-53 | -8.615850e-47 |
Msa0432680 | Msa0758860 | 0.826590 | 2.495969e-54 | -8.615850e-47 |
Msa0445360 | Msa0758860 | 0.802094 | 6.602795e-49 | -8.615850e-47 |
Msa0462590 | Msa0758860 | 0.823869 | 1.097879e-53 | -8.615850e-47 |
Msa0463020 | Msa0758860 | 0.801471 | 8.864572e-49 | -8.615850e-47 |
Msa0467800 | Msa0758860 | 0.863563 | 2.276337e-64 | -8.615850e-47 |
Msa0467880 | Msa0758860 | 0.865830 | 4.440531e-65 | -8.615850e-47 |
Msa0468610 | Msa0758860 | 0.805233 | 1.473720e-49 | -8.615850e-47 |
Msa0469970 | Msa0758860 | 0.807108 | 5.936617e-50 | -8.615850e-47 |
Msa0239660 | Msa0758860 | 0.804959 | 1.681953e-49 | -8.615850e-47 |
Msa0248560 | Msa0758860 | 0.812532 | 4.044020e-51 | -8.615850e-47 |
Msa0252180 | Msa0758860 | 0.809032 | 2.312045e-50 | -8.615850e-47 |
Msa0257130 | Msa0758860 | 0.807444 | 5.039357e-50 | -8.615850e-47 |
Msa0259330 | Msa0758860 | 0.820544 | 6.485196e-53 | -8.615850e-47 |
Msa0259980 | Msa0758860 | 0.829432 | 5.163911e-55 | -8.615850e-47 |
Msa0263430 | Msa0758860 | 0.818244 | 2.168624e-52 | -8.615850e-47 |
Msa0263620 | Msa0758860 | 0.838864 | 2.232116e-57 | -8.615850e-47 |
Msa0265580 | Msa0758860 | 0.805089 | 1.579320e-49 | -8.615850e-47 |
Msa0274780 | Msa0758860 | 0.814710 | 1.341097e-51 | -8.615850e-47 |
Msa0277530 | Msa0758860 | 0.803564 | 3.282476e-49 | -8.615850e-47 |
Msa0277640 | Msa0758860 | 0.814173 | 1.762857e-51 | -8.615850e-47 |
Msa0278620 | Msa0758860 | 0.824714 | 6.948429e-54 | -8.615850e-47 |
Msa0281570 | Msa0758860 | 0.810944 | 8.957550e-51 | -8.615850e-47 |
Msa0282170 | Msa0758860 | 0.803965 | 2.709484e-49 | -8.615850e-47 |
Msa0284780 | Msa0758860 | 0.805655 | 1.201861e-49 | -8.615850e-47 |
Msa0288240 | Msa0758860 | 0.817691 | 2.891741e-52 | -8.615850e-47 |
Msa0288330 | Msa0758860 | 0.801326 | 9.493212e-49 | -8.615850e-47 |
Msa0296000 | Msa0758860 | 0.800207 | 1.606235e-48 | -8.615850e-47 |
Msa0296610 | Msa0758860 | 0.811353 | 7.306151e-51 | -8.615850e-47 |
Msa0297920 | Msa0758860 | 0.823243 | 1.538669e-53 | -8.615850e-47 |
Msa0298970 | Msa0758860 | 0.829129 | 6.117917e-55 | -8.615850e-47 |
Msa0301020 | Msa0758860 | 0.822890 | 1.859196e-53 | -8.615850e-47 |
Msa0301180 | Msa0758860 | 0.833383 | 5.503693e-56 | -8.615850e-47 |
Msa0301460 | Msa0758860 | 0.825233 | 5.239952e-54 | -8.615850e-47 |
Msa0302650 | Msa0758860 | 0.807436 | 5.060520e-50 | -8.615850e-47 |
Msa0302660 | Msa0758860 | 0.815289 | 9.979382e-52 | -8.615850e-47 |
Msa0318000 | Msa0758860 | 0.830927 | 2.228621e-55 | -8.615850e-47 |
Msa0320540 | Msa0758860 | 0.832227 | 1.065927e-55 | -8.615850e-47 |
Msa0323990 | Msa0758860 | 0.818247 | 2.165970e-52 | -8.615850e-47 |
Msa0326670 | Msa0758860 | 0.812541 | 4.025802e-51 | -8.615850e-47 |
Msa0339860 | Msa0758860 | 0.838005 | 3.716834e-57 | -8.615850e-47 |
Msa0340550 | Msa0758860 | 0.809664 | 1.691746e-50 | -8.615850e-47 |
Msa0342200 | Msa0758860 | 0.801731 | 7.839310e-49 | -8.615850e-47 |
Msa0344070 | Msa0758860 | 0.802416 | 5.668289e-49 | -8.615850e-47 |
Msa0344640 | Msa0758860 | 0.801918 | 7.177974e-49 | -8.615850e-47 |
Msa0350910 | Msa0758860 | 0.822545 | 2.236820e-53 | -8.615850e-47 |
Msa0354390 | Msa0758860 | 0.809929 | 1.483639e-50 | -8.615850e-47 |
Msa0485280 | Msa0758860 | 0.828076 | 1.099104e-54 | -8.615850e-47 |
Msa0490300 | Msa0758860 | 0.826336 | 2.868527e-54 | -8.615850e-47 |
Msa0505390 | Msa0758860 | 0.806911 | 6.536382e-50 | -8.615850e-47 |
Msa0509540 | Msa0758860 | 0.814181 | 1.756097e-51 | -8.615850e-47 |
Msa0514260 | Msa0758860 | 0.803915 | 2.774905e-49 | -8.615850e-47 |
Msa0514490 | Msa0758860 | 0.800314 | 1.527212e-48 | -8.615850e-47 |
Msa0518160 | Msa0758860 | 0.809514 | 1.822654e-50 | -8.615850e-47 |
Msa0518520 | Msa0758860 | 0.804373 | 2.228991e-49 | -8.615850e-47 |
Msa0519200 | Msa0758860 | 0.814912 | 1.209952e-51 | -8.615850e-47 |
Msa0524090 | Msa0758860 | 0.862504 | 4.835011e-64 | -8.615850e-47 |
Msa0524120 | Msa0758860 | 0.856746 | 2.612278e-62 | -8.615850e-47 |
Msa0526700 | Msa0758860 | 0.826621 | 2.453171e-54 | -8.615850e-47 |
Msa0527590 | Msa0758860 | 0.821516 | 3.874386e-53 | -8.615850e-47 |
Msa0527600 | Msa0758860 | 0.811744 | 6.007998e-51 | -8.615850e-47 |
Msa0532840 | Msa0758860 | 0.829924 | 3.920797e-55 | -8.615850e-47 |
Msa0533010 | Msa0758860 | 0.830009 | 3.738793e-55 | -8.615850e-47 |
Msa0542010 | Msa0758860 | 0.829172 | 5.971701e-55 | -8.615850e-47 |
Msa0542040 | Msa0758860 | 0.818082 | 2.360366e-52 | -8.615850e-47 |
Msa0546380 | Msa0758860 | 0.811316 | 7.441061e-51 | -8.615850e-47 |
Msa0546740 | Msa0758860 | 0.843348 | 1.480551e-58 | -8.615850e-47 |
Msa0549740 | Msa0758860 | 0.828805 | 7.328347e-55 | -8.615850e-47 |
Msa0553520 | Msa0758860 | 0.820333 | 7.251128e-53 | -8.615850e-47 |
Msa0564930 | Msa0758860 | 0.816261 | 6.059304e-52 | -8.615850e-47 |
Msa0567290 | Msa0758860 | 0.834038 | 3.775211e-56 | -8.615850e-47 |
Msa0574170 | Msa0758860 | 0.803943 | 2.738091e-49 | -8.615850e-47 |
Msa0576420 | Msa0758860 | 0.828477 | 8.798676e-55 | -8.615850e-47 |
Msa0581460 | Msa0758860 | 0.806059 | 9.885042e-50 | -8.615850e-47 |
Msa0583310 | Msa0758860 | 0.802266 | 6.087700e-49 | -8.615850e-47 |
Msa0590660 | Msa0758860 | 0.812876 | 3.400482e-51 | -8.615850e-47 |
Msa0591770 | Msa0758860 | 0.801212 | 1.001472e-48 | -8.615850e-47 |
Msa0600390 | Msa0758860 | 0.811524 | 6.707087e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0758860 | MtrunA17_Chr5g0405451 | 91.031 | 446 | 29 | 4 | 1 | 442 | 1 | 439 | 0.0 | 781 |
Msa0758860 | MtrunA17_Chr5g0406201 | 74.138 | 464 | 72 | 8 | 8 | 431 | 6 | 461 | 0.0 | 631 |
Msa0758860 | MtrunA17_Chr2g0303671 | 46.154 | 182 | 97 | 1 | 248 | 428 | 123 | 304 | 1.97e-52 | 178 |
Msa0758860 | MtrunA17_Chr5g0418551 | 32.353 | 136 | 92 | 0 | 273 | 408 | 91 | 226 | 1.57e-16 | 79.0 |
Msa0758860 | MtrunA17_Chr5g0418551 | 31.618 | 136 | 90 | 1 | 276 | 408 | 58 | 193 | 6.17e-15 | 74.3 |
Msa0758860 | MtrunA17_Chr5g0409271 | 30.657 | 137 | 94 | 1 | 276 | 411 | 15 | 151 | 5.47e-14 | 72.0 |
Msa0758860 | MtrunA17_Chr4g0049351 | 29.825 | 171 | 112 | 3 | 248 | 417 | 40 | 203 | 1.64e-12 | 69.3 |
Msa0758860 | MtrunA17_Chr5g0434371 | 35.714 | 154 | 93 | 2 | 275 | 428 | 591 | 738 | 6.26e-12 | 67.8 |
Msa0758860 | MtrunA17_Chr6g0461061 | 28.108 | 185 | 131 | 2 | 257 | 440 | 195 | 378 | 8.43e-12 | 67.0 |
Msa0758860 | MtrunA17_Chr4g0063141 | 33.088 | 136 | 88 | 2 | 276 | 410 | 555 | 688 | 1.14e-11 | 67.0 |
Msa0758860 | MtrunA17_Chr7g0221441 | 36.905 | 84 | 53 | 0 | 337 | 420 | 739 | 822 | 1.94e-11 | 66.2 |
Msa0758860 | MtrunA17_Chr7g0274241 | 26.974 | 152 | 109 | 2 | 264 | 415 | 114 | 263 | 5.91e-11 | 64.3 |
Msa0758860 | MtrunA17_Chr8g0361891 | 33.333 | 108 | 72 | 0 | 288 | 395 | 245 | 352 | 7.59e-11 | 63.5 |
Msa0758860 | MtrunA17_Chr3g0127131 | 32.000 | 100 | 66 | 1 | 314 | 411 | 244 | 343 | 9.24e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0758860 | AT5G66055.1 | 53.066 | 424 | 184 | 6 | 23 | 436 | 7 | 425 | 4.77e-151 | 436 |
Msa0758860 | AT5G66055.2 | 49.721 | 358 | 166 | 5 | 23 | 371 | 7 | 359 | 5.16e-114 | 339 |
Msa0758860 | AT5G40160.1 | 47.253 | 182 | 95 | 1 | 248 | 428 | 127 | 308 | 1.24e-52 | 179 |
Msa0758860 | AT5G40160.2 | 46.795 | 156 | 82 | 1 | 248 | 402 | 127 | 282 | 1.49e-43 | 155 |
Msa0758860 | AT2G25600.1 | 32.877 | 146 | 95 | 2 | 276 | 420 | 581 | 724 | 7.24e-13 | 71.2 |
Msa0758860 | AT4G27780.1 | 39.241 | 79 | 48 | 0 | 333 | 411 | 261 | 339 | 2.17e-12 | 68.6 |
Msa0758860 | AT2G03430.1 | 29.710 | 138 | 97 | 0 | 271 | 408 | 82 | 219 | 5.55e-12 | 65.9 |
Msa0758860 | AT5G53470.1 | 31.683 | 101 | 67 | 1 | 313 | 411 | 224 | 324 | 2.16e-11 | 65.5 |
Msa0758860 | AT4G19150.1 | 25.466 | 161 | 115 | 2 | 276 | 435 | 20 | 176 | 3.65e-11 | 63.5 |
Msa0758860 | AT2G14255.1 | 30.667 | 150 | 101 | 2 | 264 | 410 | 83 | 232 | 4.46e-11 | 65.1 |
Msa0758860 | AT5G13300.1 | 32.673 | 101 | 66 | 1 | 327 | 427 | 718 | 816 | 6.40e-11 | 65.1 |
Find 87 sgRNAs with CRISPR-Local
Find 279 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCATTATTTGTAGGATAAA+TGG | 0.153410 | 5_2:+14260514 | Msa0758860:intron |
TTCTTCTTTGAAATTGAAAT+TGG | 0.200442 | 5_2:-14258693 | None:intergenic |
AATCCTAGATGGGCTGTTTA+TGG | 0.219355 | 5_2:+14259020 | Msa0758860:CDS |
CAGTTGAAGCCTTTGGTTCT+TGG | 0.229120 | 5_2:+14258924 | Msa0758860:CDS |
AGAATCTTGTTCCTGATAAA+TGG | 0.230329 | 5_2:+14258739 | Msa0758860:CDS |
GTTGATTCCTTTGAGGGATA+TGG | 0.236009 | 5_2:+14258860 | Msa0758860:CDS |
TGAACTTCTTTCCATTTATC+AGG | 0.246691 | 5_2:-14258750 | None:intergenic |
GCTCTTTACAAAGCGGTAAT+TGG | 0.259504 | 5_2:+14260725 | Msa0758860:CDS |
TTTGAAATTGAAATTGGTTT+TGG | 0.269853 | 5_2:-14258687 | None:intergenic |
GTGAAGCTTCTGCTGATTAA+AGG | 0.274738 | 5_2:+14261532 | Msa0758860:CDS |
TGCTTATAAAGAAGCTAAAT+TGG | 0.283684 | 5_2:+14258899 | Msa0758860:CDS |
CATATGGAAACTTTAGCTTT+AGG | 0.289789 | 5_2:+14262891 | Msa0758860:three_prime_UTR |
GTCTGTCGGGAGCGTCTATA+AGG | 0.356780 | 5_2:-14262766 | None:intergenic |
GACTCTGCTGCTATGAAAAC+TGG | 0.356814 | 5_2:+14259089 | Msa0758860:CDS |
ATTGGCTCAGTTGAAGCCTT+TGG | 0.368198 | 5_2:+14258917 | Msa0758860:CDS |
TGATGTTGATATTAATGTTA+TGG | 0.368619 | 5_2:+14260599 | Msa0758860:CDS |
CAATGTGGATATAAATCTTC+AGG | 0.373575 | 5_2:+14261362 | Msa0758860:CDS |
AAGAAGAGTGTGTGGGGTTG+TGG | 0.374765 | 5_2:-14258441 | None:intergenic |
ACAAGAATACTTTAATTGTT+CGG | 0.385277 | 5_2:-14261335 | None:intergenic |
TGATATTAATGTTATGGATA+AGG | 0.387981 | 5_2:+14260605 | Msa0758860:CDS |
ATCCTAGATGGGCTGTTTAT+GGG | 0.393025 | 5_2:+14259021 | Msa0758860:CDS |
TCTCAAGAGACAGTTGGTTA+TGG | 0.396572 | 5_2:-14260759 | None:intergenic |
TAGTGCCTAGGAATCCTAGA+TGG | 0.397952 | 5_2:+14259009 | Msa0758860:CDS |
TCAAAACTCGCAACTAGTTA+TGG | 0.406325 | 5_2:+14258353 | None:intergenic |
CTCACATTATCTTGCACAAA+CGG | 0.408366 | 5_2:-14260794 | None:intergenic |
AAATGTATTCAAAATATGAT+AGG | 0.418620 | 5_2:+14262938 | Msa0758860:three_prime_UTR |
GAAGCCTTTGGTTCTTGGTA+AGG | 0.419470 | 5_2:+14258929 | Msa0758860:CDS |
AGATGGGCTGTTTATGGGAG+AGG | 0.423749 | 5_2:+14259026 | Msa0758860:CDS |
TTGCTCTGTCTTAGGATGGC+TGG | 0.424376 | 5_2:+14261467 | Msa0758860:intron |
TTCTTCTTATCCCCGTCTGT+CGG | 0.435105 | 5_2:-14262780 | None:intergenic |
AAGAGGGTTGATTCCTTTGA+GGG | 0.442733 | 5_2:+14258854 | Msa0758860:CDS |
CGGAGACTGTCTTGTCTTCG+AGG | 0.443191 | 5_2:+14258602 | Msa0758860:CDS |
AAAGAGGGTTGATTCCTTTG+AGG | 0.450936 | 5_2:+14258853 | Msa0758860:CDS |
TCTTCTTATCCCCGTCTGTC+GGG | 0.451834 | 5_2:-14262779 | None:intergenic |
GTCGTCCTAGGTTGTTTACC+AGG | 0.463875 | 5_2:+14260161 | Msa0758860:CDS |
ACGAGGTTGTTGTCGGAAGT+TGG | 0.464298 | 5_2:-14258651 | None:intergenic |
GCAAGCAGCTCTTCAGCATA+TGG | 0.476206 | 5_2:+14262875 | Msa0758860:three_prime_UTR |
AAAGTTATGAAGAAGAAAAG+AGG | 0.482187 | 5_2:+14258837 | Msa0758860:CDS |
ACAGCCCATCTAGGATTCCT+AGG | 0.499470 | 5_2:-14259014 | None:intergenic |
TTTATCAGGAACAAGATTCT+CGG | 0.500203 | 5_2:-14258736 | None:intergenic |
GTTGTTTACGAGGTTGTTGT+CGG | 0.500244 | 5_2:-14258658 | None:intergenic |
CTCGACCTTTGCCTTTACTC+TGG | 0.500612 | 5_2:+14262700 | Msa0758860:CDS |
CTCCCATAAACAGCCCATCT+AGG | 0.507590 | 5_2:-14259023 | None:intergenic |
GTTGTTTACCAGGGAGGAGA+GGG | 0.513400 | 5_2:+14260171 | Msa0758860:CDS |
CTTCGTAGTTGTTGTCATGT+TGG | 0.515970 | 5_2:-14258569 | None:intergenic |
AAGTTATGAAGAAGAAAAGA+GGG | 0.517219 | 5_2:+14258838 | Msa0758860:CDS |
AGGTGGGTTGAGTGATGAGA+GGG | 0.518172 | 5_2:+14258986 | Msa0758860:CDS |
GAAGTAGCAACTGACAAGTC+TGG | 0.525281 | 5_2:-14260214 | None:intergenic |
ATGGAGAGAAGAAGAGTGTG+TGG | 0.526930 | 5_2:-14258449 | None:intergenic |
TGGAGAGAAGAAGAGTGTGT+GGG | 0.527588 | 5_2:-14258448 | None:intergenic |
GACTGTCTTGTCTTCGAGGA+AGG | 0.528284 | 5_2:+14258606 | Msa0758860:CDS |
TGTTTATGGGAGAGGTTTCG+AGG | 0.529560 | 5_2:+14259034 | Msa0758860:CDS |
GAGGATGATGAAGAAGAAGA+AGG | 0.531032 | 5_2:+14258966 | Msa0758860:CDS |
GATGATGAAGAAGAAGAAGG+TGG | 0.541756 | 5_2:+14258969 | Msa0758860:CDS |
AGTATTCTTGTTGTACAATG+TGG | 0.542995 | 5_2:+14261347 | Msa0758860:CDS |
CGAGTTTCTCAAGAGACAGT+TGG | 0.545416 | 5_2:-14260765 | None:intergenic |
TATAGACGCTCCCGACAGAC+GGG | 0.545707 | 5_2:+14262769 | Msa0758860:CDS |
CAACAAATCCCTCTCCTCCC+TGG | 0.550164 | 5_2:-14260179 | None:intergenic |
GTCTGAACAGCAAGATGTAA+TGG | 0.552014 | 5_2:-14261493 | None:intergenic |
ATGATGAAGAAGAAGAAGGT+GGG | 0.557970 | 5_2:+14258970 | Msa0758860:CDS |
AAGGTGGGTTGAGTGATGAG+AGG | 0.562680 | 5_2:+14258985 | Msa0758860:CDS |
AGATTGAAACTTGCGAGGTG+TGG | 0.571179 | 5_2:-14258496 | None:intergenic |
GAGTAAAGGCAAAGGTCGAG+TGG | 0.584489 | 5_2:-14262697 | None:intergenic |
TTCAAATCCATATCCCTCAA+AGG | 0.588549 | 5_2:-14258867 | None:intergenic |
AGTGCCTAGGAATCCTAGAT+GGG | 0.592539 | 5_2:+14259010 | Msa0758860:CDS |
TTATAGACGCTCCCGACAGA+CGG | 0.598131 | 5_2:+14262768 | Msa0758860:CDS |
GGTTGTTTACCAGGGAGGAG+AGG | 0.600499 | 5_2:+14260170 | Msa0758860:CDS |
TCGTCCTAGGTTGTTTACCA+GGG | 0.600545 | 5_2:+14260162 | Msa0758860:CDS |
GAAACTTTAGCTTTAGGACA+AGG | 0.609493 | 5_2:+14262897 | Msa0758860:three_prime_UTR |
AATTACCGCTTTGTAAAGAG+CGG | 0.611856 | 5_2:-14260723 | None:intergenic |
TAAACATAACGAAGAAAGAA+CGG | 0.615305 | 5_2:+14258781 | Msa0758860:CDS |
GTGATGAGAGGGTAGTGCCT+AGG | 0.618143 | 5_2:+14258997 | Msa0758860:CDS |
CTTGCAGCAAAAGTGTGCAA+AGG | 0.619949 | 5_2:-14260540 | None:intergenic |
TGAAGAGATTGAAACTTGCG+AGG | 0.633811 | 5_2:-14258501 | None:intergenic |
CAACTGTCTCTTGAGAAACT+CGG | 0.635724 | 5_2:+14260766 | Msa0758860:CDS |
TTTGACCAGAGTAAAGGCAA+AGG | 0.636122 | 5_2:-14262705 | None:intergenic |
TCCTAGGTTGTTTACCAGGG+AGG | 0.641807 | 5_2:+14260165 | Msa0758860:CDS |
GGAGAGAAGAAGAGTGTGTG+GGG | 0.642297 | 5_2:-14258447 | None:intergenic |
AAAACCTTACCAAGAACCAA+AGG | 0.642740 | 5_2:-14258933 | None:intergenic |
TTGTACAGCATAGTGCATCA+AGG | 0.649508 | 5_2:-14261301 | None:intergenic |
AACTACGAAGAACACATCAT+CGG | 0.651971 | 5_2:+14258582 | Msa0758860:CDS |
TCCTCCCTGGTAAACAACCT+AGG | 0.653160 | 5_2:-14260166 | None:intergenic |
TTGTGGATTATGAACAAGTG+TGG | 0.665151 | 5_2:-14258424 | None:intergenic |
ATAGACGCTCCCGACAGACG+GGG | 0.691778 | 5_2:+14262770 | Msa0758860:CDS |
TTTGACCGCTCTTTACAAAG+CGG | 0.710243 | 5_2:+14260718 | Msa0758860:CDS |
TACAGCATAGTGCATCAAGG+TGG | 0.722597 | 5_2:-14261298 | None:intergenic |
TCTGCTGCTATGAAAACTGG+AGG | 0.737144 | 5_2:+14259092 | Msa0758860:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAAAAAAAAAAAA+CGG | + | chr5_2:14261801-14261820 | Msa0758860:intron | 0.0% |
!! | AATAATTTATAAAATAGAAG+CGG | + | chr5_2:14261869-14261888 | Msa0758860:intron | 10.0% |
!!! | AATTTTTTCATAAAAAAAGA+AGG | + | chr5_2:14262968-14262987 | Msa0758860:three_prime_UTR | 10.0% |
!! | ACTATATGTTAATAGATTAA+GGG | - | chr5_2:14261197-14261216 | None:intergenic | 15.0% |
!! | AACTATATGTTAATAGATTA+AGG | - | chr5_2:14261198-14261217 | None:intergenic | 15.0% |
!! | TTACATTGATAGATTAATAT+AGG | - | chr5_2:14261601-14261620 | None:intergenic | 15.0% |
!! | ATAATTTATAAAATAGAAGC+GGG | + | chr5_2:14261870-14261889 | Msa0758860:intron | 15.0% |
!!! | AAATAAAACTTTTGATGATT+TGG | + | chr5_2:14262802-14262821 | Msa0758860:exon | 15.0% |
!! | AAATGTATTCAAAATATGAT+AGG | + | chr5_2:14262938-14262957 | Msa0758860:three_prime_UTR | 15.0% |
!! | TAAAAATGTGATTTCTAATT+TGG | + | chr5_2:14263016-14263035 | Msa0758860:three_prime_UTR | 15.0% |
!!! | TTTGAAATTGAAATTGGTTT+TGG | - | chr5_2:14258690-14258709 | None:intergenic | 20.0% |
!!! | TTCTTCTTTGAAATTGAAAT+TGG | - | chr5_2:14258696-14258715 | None:intergenic | 20.0% |
!!! | TTTGTATTTACAATCTGTTT+TGG | + | chr5_2:14259118-14259137 | Msa0758860:intron | 20.0% |
!! | AAAACTAAAAGTTGTTACAT+AGG | - | chr5_2:14259180-14259199 | None:intergenic | 20.0% |
!! | TCTTCATAGATTATTGTTTA+GGG | + | chr5_2:14259458-14259477 | Msa0758860:intron | 20.0% |
!!! | TATGGACATTTTGAAAAATA+AGG | + | chr5_2:14259679-14259698 | Msa0758860:intron | 20.0% |
!!! | ATGGACATTTTGAAAAATAA+GGG | + | chr5_2:14259680-14259699 | Msa0758860:intron | 20.0% |
!! | TGTTAGTTGAAACAAATTTA+TGG | + | chr5_2:14259735-14259754 | Msa0758860:intron | 20.0% |
!! | ATGAAAAAGTTGAGATATAA+AGG | + | chr5_2:14259813-14259832 | Msa0758860:intron | 20.0% |
!! | TAACAGTACAAAATATAATG+AGG | - | chr5_2:14260291-14260310 | None:intergenic | 20.0% |
!!! | ATTATATTTTGTACTGTTAC+TGG | + | chr5_2:14260292-14260311 | Msa0758860:intron | 20.0% |
!!! | CTCTATATTTATGTTTTCAA+TGG | + | chr5_2:14260485-14260504 | Msa0758860:intron | 20.0% |
!! | TGATGTTGATATTAATGTTA+TGG | + | chr5_2:14260599-14260618 | Msa0758860:CDS | 20.0% |
!! | TGATATTAATGTTATGGATA+AGG | + | chr5_2:14260605-14260624 | Msa0758860:CDS | 20.0% |
!! | CATGAATACTAATTTATACA+CGG | + | chr5_2:14260630-14260649 | Msa0758860:intron | 20.0% |
!! | AAACACAATAGTTTAAATAG+AGG | - | chr5_2:14260676-14260695 | None:intergenic | 20.0% |
!!! | TGTTTTGTTTTACTTTTTCA+AGG | + | chr5_2:14260691-14260710 | Msa0758860:intron | 20.0% |
!! | ACAAGAATACTTTAATTGTT+CGG | - | chr5_2:14261338-14261357 | None:intergenic | 20.0% |
!! | TGATCAGAAATTAAAAAACA+AGG | + | chr5_2:14261558-14261577 | Msa0758860:CDS | 20.0% |
!!! | TTGAATATAGATGCTTTTAA+CGG | + | chr5_2:14261649-14261668 | Msa0758860:intron | 20.0% |
!! | AAAAAGGGAAAAAATACAAT+GGG | - | chr5_2:14261723-14261742 | None:intergenic | 20.0% |
!! | AAAAAAGGGAAAAAATACAA+TGG | - | chr5_2:14261724-14261743 | None:intergenic | 20.0% |
!!! | AATTCTTTAGAAAATAGAAG+TGG | + | chr5_2:14262002-14262021 | Msa0758860:intron | 20.0% |
!!! | AAAACTTTCAACTGTTATTT+AGG | + | chr5_2:14262231-14262250 | Msa0758860:intron | 20.0% |
!!! | TTTTTTTTTTATCCAAGCAT+GGG | - | chr5_2:14262312-14262331 | None:intergenic | 20.0% |
!!! | ATTTTTTTTTTATCCAAGCA+TGG | - | chr5_2:14262313-14262332 | None:intergenic | 20.0% |
!! | AACTAAATATTCATCAATCA+CGG | - | chr5_2:14262448-14262467 | None:intergenic | 20.0% |
!!! | ATATCATAATATTTTGTCTG+TGG | + | chr5_2:14262531-14262550 | Msa0758860:intron | 20.0% |
!! | AAATATCACTGTAAAAGAAA+TGG | - | chr5_2:14262636-14262655 | None:intergenic | 20.0% |
! | TAAACATAACGAAGAAAGAA+CGG | + | chr5_2:14258781-14258800 | Msa0758860:CDS | 25.0% |
! | AAAGTTATGAAGAAGAAAAG+AGG | + | chr5_2:14258837-14258856 | Msa0758860:CDS | 25.0% |
! | AAGTTATGAAGAAGAAAAGA+GGG | + | chr5_2:14258838-14258857 | Msa0758860:CDS | 25.0% |
! | TGCTTATAAAGAAGCTAAAT+TGG | + | chr5_2:14258899-14258918 | Msa0758860:CDS | 25.0% |
!!! | TATTTTTGTTAATGCTGTTG+AGG | + | chr5_2:14259144-14259163 | Msa0758860:intron | 25.0% |
! | CTCTTCATAGATTATTGTTT+AGG | + | chr5_2:14259457-14259476 | Msa0758860:intron | 25.0% |
!!! | TATGCTTGTTAGATAACTTT+TGG | + | chr5_2:14259604-14259623 | Msa0758860:intron | 25.0% |
!!! | TTGGATTTGCTTTTGATTTA+TGG | + | chr5_2:14259707-14259726 | Msa0758860:intron | 25.0% |
!!! | TGGATTTGCTTTTGATTTAT+GGG | + | chr5_2:14259708-14259727 | Msa0758860:intron | 25.0% |
!! | TGGATCATTTTATTCATTGA+TGG | + | chr5_2:14260028-14260047 | Msa0758860:intron | 25.0% |
!! | TATTCATTGATGGTTAAATC+CGG | + | chr5_2:14260038-14260057 | Msa0758860:intron | 25.0% |
! | TTCTCATTGTTTGCAATATA+TGG | + | chr5_2:14260088-14260107 | Msa0758860:intron | 25.0% |
! | TACAAAATATAATGAGGATG+AGG | - | chr5_2:14260285-14260304 | None:intergenic | 25.0% |
! | TTACTTCAACATCAAAACAA+AGG | - | chr5_2:14260340-14260359 | None:intergenic | 25.0% |
!! | TAGAATCATAATAGAAGTGT+AGG | + | chr5_2:14260422-14260441 | Msa0758860:intron | 25.0% |
!! | AGAATCATAATAGAAGTGTA+GGG | + | chr5_2:14260423-14260442 | Msa0758860:intron | 25.0% |
! | CTCATTATTTGTAGGATAAA+TGG | + | chr5_2:14260514-14260533 | Msa0758860:intron | 25.0% |
!!! | TACTTTTAGAATCTTTGTTG+CGG | + | chr5_2:14260574-14260593 | Msa0758860:CDS | 25.0% |
!!! | TTGTTTTACTTTTTCAAGGA+TGG | + | chr5_2:14260695-14260714 | Msa0758860:intron | 25.0% |
! | ATAAACACTTATATGACAAG+AGG | - | chr5_2:14260964-14260983 | None:intergenic | 25.0% |
! | AATATGCTGAAAACAACTTA+TGG | + | chr5_2:14261079-14261098 | Msa0758860:intron | 25.0% |
!! | TGAATATAGATGCTTTTAAC+GGG | + | chr5_2:14261650-14261669 | Msa0758860:intron | 25.0% |
! | AAAAAAAAAAAACGGGTCAT+TGG | + | chr5_2:14261811-14261830 | Msa0758860:intron | 25.0% |
!! | TGAATATAGGTGCTTTTAAT+GGG | + | chr5_2:14261894-14261913 | Msa0758860:intron | 25.0% |
! | TTAAATGTAACTTCATGTGT+TGG | + | chr5_2:14262025-14262044 | Msa0758860:intron | 25.0% |
! | TTTCATCTAAATCACCTAAT+TGG | - | chr5_2:14262122-14262141 | None:intergenic | 25.0% |
! | AATTAGGTGATTTAGATGAA+AGG | + | chr5_2:14262121-14262140 | Msa0758860:intron | 25.0% |
! | CTAAGTCATTAAAAACCTAT+CGG | + | chr5_2:14262198-14262217 | Msa0758860:intron | 25.0% |
AAGAAGAAGAAGAAGAAGAA+GGG | - | chr5_2:14258476-14258495 | None:intergenic | 30.0% | |
!!! | TTGGTTTTTTGTTGTTTACG+AGG | - | chr5_2:14258671-14258690 | None:intergenic | 30.0% |
AAAGAAGAAAAAGAAGACAG+TGG | + | chr5_2:14258707-14258726 | Msa0758860:CDS | 30.0% | |
TTTATCAGGAACAAGATTCT+CGG | - | chr5_2:14258739-14258758 | None:intergenic | 30.0% | |
AGAATCTTGTTCCTGATAAA+TGG | + | chr5_2:14258739-14258758 | Msa0758860:CDS | 30.0% | |
TGAACTTCTTTCCATTTATC+AGG | - | chr5_2:14258753-14258772 | None:intergenic | 30.0% | |
! | TAAGGTTTTTGTTGAGAAAG+AGG | + | chr5_2:14258947-14258966 | Msa0758860:CDS | 30.0% |
CAAACACATGTATTTACGTT+TGG | + | chr5_2:14259245-14259264 | Msa0758860:intron | 30.0% | |
TGACACAATAATCTATGAAG+CGG | - | chr5_2:14259320-14259339 | None:intergenic | 30.0% | |
!! | TATGAAATGTATTGGTGTCA+GGG | + | chr5_2:14259344-14259363 | Msa0758860:intron | 30.0% |
!! | GACATTTTGAAAAATAAGGG+TGG | + | chr5_2:14259683-14259702 | Msa0758860:intron | 30.0% |
TTTGAAAAATAAGGGTGGTT+TGG | + | chr5_2:14259688-14259707 | Msa0758860:intron | 30.0% | |
! | TCTCTTCAGATAAGTGTTTT+TGG | + | chr5_2:14259907-14259926 | Msa0758860:intron | 30.0% |
TTGGAGAAGTTTATCCAAAA+TGG | + | chr5_2:14259926-14259945 | Msa0758860:intron | 30.0% | |
ATCCAAAATGGCTCTTAAAT+TGG | + | chr5_2:14259938-14259957 | Msa0758860:intron | 30.0% | |
TGTTTATATTGCCATCCATT+AGG | - | chr5_2:14259986-14260005 | None:intergenic | 30.0% | |
GAAATTCGATTGTGATGAAA+TGG | + | chr5_2:14260008-14260027 | Msa0758860:intron | 30.0% | |
! | ATTCATTGATGGTTAAATCC+GGG | + | chr5_2:14260039-14260058 | Msa0758860:intron | 30.0% |
GCATAAAATGAATATCTTCC+CGG | - | chr5_2:14260060-14260079 | None:intergenic | 30.0% | |
! | TCTTTCATGCTTTTGTGTAT+AGG | + | chr5_2:14260139-14260158 | Msa0758860:intron | 30.0% |
! | GAATCATAATAGAAGTGTAG+GGG | + | chr5_2:14260424-14260443 | Msa0758860:intron | 30.0% |
! | ATTCACTTGTTTGTTACCTT+CGG | + | chr5_2:14260454-14260473 | Msa0758860:intron | 30.0% |
ATATAGAGATTACTTACCGA+AGG | - | chr5_2:14260473-14260492 | None:intergenic | 30.0% | |
GGCTAATACTCATTATTTGT+AGG | + | chr5_2:14260506-14260525 | Msa0758860:intron | 30.0% | |
TGATAACAATGATGAATTCC+CGG | - | chr5_2:14260915-14260934 | None:intergenic | 30.0% | |
! | TAATAGATTAAGGGCATGTT+TGG | - | chr5_2:14261188-14261207 | None:intergenic | 30.0% |
TTATATCCTTAGTTACCTGT+TGG | + | chr5_2:14261219-14261238 | Msa0758860:intron | 30.0% | |
AAGCAAATGCATAGAATATC+AGG | - | chr5_2:14261248-14261267 | None:intergenic | 30.0% | |
! | AGTATTCTTGTTGTACAATG+TGG | + | chr5_2:14261347-14261366 | Msa0758860:CDS | 30.0% |
CAATGTGGATATAAATCTTC+AGG | + | chr5_2:14261362-14261381 | Msa0758860:CDS | 30.0% | |
! | TGAATTTTGTTCTCAAACAG+TGG | - | chr5_2:14261446-14261465 | None:intergenic | 30.0% |
AAATTCATTTGCTCTGTCTT+AGG | + | chr5_2:14261459-14261478 | Msa0758860:intron | 30.0% | |
AAAAACTCGCGGATAAAAAA+GGG | - | chr5_2:14261738-14261757 | None:intergenic | 30.0% | |
AAAAAACTCGCGGATAAAAA+AGG | - | chr5_2:14261739-14261758 | None:intergenic | 30.0% | |
! | CTGAATATAGGTGCTTTTAA+TGG | + | chr5_2:14261893-14261912 | Msa0758860:intron | 30.0% |
ACATGTATTCTTCAGAAAAC+AGG | + | chr5_2:14262066-14262085 | Msa0758860:intron | 30.0% | |
! | AATCACCTAATTGGTTCTTA+AGG | - | chr5_2:14262113-14262132 | None:intergenic | 30.0% |
! | CGATAGGTTTTTAATGACTT+AGG | - | chr5_2:14262200-14262219 | None:intergenic | 30.0% |
!! | AGGCTTGATTGAATTTGTTT+TGG | + | chr5_2:14262420-14262439 | Msa0758860:intron | 30.0% |
AACAATCAATCATTGCTCAA+GGG | - | chr5_2:14262575-14262594 | None:intergenic | 30.0% | |
!! | ATTTGTCTTTTGTTTGTCTC+AGG | + | chr5_2:14262663-14262682 | Msa0758860:intron | 30.0% |
!!! | TGATATTTTGACCAGAGTAA+AGG | - | chr5_2:14262714-14262733 | None:intergenic | 30.0% |
!! | CATATGGAAACTTTAGCTTT+AGG | + | chr5_2:14262891-14262910 | Msa0758860:three_prime_UTR | 30.0% |
! | TTGTGGATTATGAACAAGTG+TGG | - | chr5_2:14258427-14258446 | None:intergenic | 35.0% |
GAAGAAGAAGAAGAAGAAGA+AGG | - | chr5_2:14258477-14258496 | None:intergenic | 35.0% | |
! | AGAGAATTTTGTGGAAGTTG+CGG | - | chr5_2:14258539-14258558 | None:intergenic | 35.0% |
! | GTGATGAAGAGAGAATTTTG+TGG | - | chr5_2:14258548-14258567 | None:intergenic | 35.0% |
AACTACGAAGAACACATCAT+CGG | + | chr5_2:14258582-14258601 | Msa0758860:CDS | 35.0% | |
TTGTCGGAAGTTGGAAAAAT+GGG | - | chr5_2:14258645-14258664 | None:intergenic | 35.0% | |
TTCAAATCCATATCCCTCAA+AGG | - | chr5_2:14258870-14258889 | None:intergenic | 35.0% | |
AAAACCTTACCAAGAACCAA+AGG | - | chr5_2:14258936-14258955 | None:intergenic | 35.0% | |
ATGATGAAGAAGAAGAAGGT+GGG | + | chr5_2:14258970-14258989 | Msa0758860:CDS | 35.0% | |
!!! | AGTTTTAGATTGAACGTGTC+AGG | + | chr5_2:14259194-14259213 | Msa0758860:intron | 35.0% |
GCTTCATAGATTATTGTGTC+AGG | + | chr5_2:14259319-14259338 | Msa0758860:intron | 35.0% | |
GTCAGGTGTATGAAATGTAT+TGG | + | chr5_2:14259336-14259355 | Msa0758860:intron | 35.0% | |
! | GTATGAAATGTATTGGTGTC+AGG | + | chr5_2:14259343-14259362 | Msa0758860:intron | 35.0% |
TCAGGGTGTATGAAATGTAT+TGG | + | chr5_2:14259361-14259380 | Msa0758860:intron | 35.0% | |
CACATACATGTAGTTACCTT+TGG | + | chr5_2:14259391-14259410 | Msa0758860:intron | 35.0% | |
CAAGCACATGTAGTTATGTT+TGG | + | chr5_2:14259518-14259537 | Msa0758860:intron | 35.0% | |
GTAGTGAAAATCAACTTCCT+TGG | + | chr5_2:14259648-14259667 | Msa0758860:intron | 35.0% | |
! | CACCAATTTAAGAGCCATTT+TGG | - | chr5_2:14259943-14259962 | None:intergenic | 35.0% |
TTCAGTAAGTATTCCATGTC+TGG | + | chr5_2:14260234-14260253 | Msa0758860:intron | 35.0% | |
! | TAATAGAAGTGTAGGGGAAA+AGG | + | chr5_2:14260430-14260449 | Msa0758860:intron | 35.0% |
ACACGGAAGATTATAATGTG+TGG | + | chr5_2:14260647-14260666 | Msa0758860:intron | 35.0% | |
AATTACCGCTTTGTAAAGAG+CGG | - | chr5_2:14260726-14260745 | None:intergenic | 35.0% | |
CTCACATTATCTTGCACAAA+CGG | - | chr5_2:14260797-14260816 | None:intergenic | 35.0% | |
! | CTGTTTTCATAAGCTATCCT+GGG | + | chr5_2:14261046-14261065 | Msa0758860:intron | 35.0% |
TAGAATATCAGGATACCAAC+AGG | - | chr5_2:14261237-14261256 | None:intergenic | 35.0% | |
!! | TTGCTTTGTTGTTTATGTGC+TGG | + | chr5_2:14261262-14261281 | Msa0758860:intron | 35.0% |
GAGGTAGACAAGCTAATTAT+TGG | - | chr5_2:14261408-14261427 | None:intergenic | 35.0% | |
GTGGTCTACAAAAAAGTAAG+AGG | - | chr5_2:14261427-14261446 | None:intergenic | 35.0% | |
ACCTTGTGTGTTAGATAATG+TGG | + | chr5_2:14261625-14261644 | Msa0758860:intron | 35.0% | |
CCTTGTGTGTTAGATAATGT+GGG | + | chr5_2:14261626-14261645 | Msa0758860:intron | 35.0% | |
TGTGGTGTTCCATATAATTG+CGG | + | chr5_2:14261694-14261713 | Msa0758860:intron | 35.0% | |
GGTAAAATATCAGTTGTCAC+TGG | + | chr5_2:14261922-14261941 | Msa0758860:intron | 35.0% | |
!! | TTCATGTGTTGGTGTTATGT+TGG | + | chr5_2:14262036-14262055 | Msa0758860:intron | 35.0% |
CTCTTCCTTAAGAACCAATT+AGG | + | chr5_2:14262105-14262124 | Msa0758860:intron | 35.0% | |
! | GTTTTTCTTCAACAACCGAT+AGG | - | chr5_2:14262216-14262235 | None:intergenic | 35.0% |
GAACAATCAATCATTGCTCA+AGG | - | chr5_2:14262576-14262595 | None:intergenic | 35.0% | |
AGCAGTAAGCAGATTAATAC+TGG | + | chr5_2:14262610-14262629 | Msa0758860:intron | 35.0% | |
!! | GAAACTTTAGCTTTAGGACA+AGG | + | chr5_2:14262897-14262916 | Msa0758860:three_prime_UTR | 35.0% |
GAAGAAGAAGAAGAAGGGAA+TGG | - | chr5_2:14258471-14258490 | None:intergenic | 40.0% | |
TGAAGAGATTGAAACTTGCG+AGG | - | chr5_2:14258504-14258523 | None:intergenic | 40.0% | |
CTTCGTAGTTGTTGTCATGT+TGG | - | chr5_2:14258572-14258591 | None:intergenic | 40.0% | |
TGTCGGAAGTTGGAAAAATG+GGG | - | chr5_2:14258644-14258663 | None:intergenic | 40.0% | |
GTTGTCGGAAGTTGGAAAAA+TGG | - | chr5_2:14258646-14258665 | None:intergenic | 40.0% | |
GTTGTTTACGAGGTTGTTGT+CGG | - | chr5_2:14258661-14258680 | None:intergenic | 40.0% | |
! | AAAGAGGGTTGATTCCTTTG+AGG | + | chr5_2:14258853-14258872 | Msa0758860:CDS | 40.0% |
! | AAGAGGGTTGATTCCTTTGA+GGG | + | chr5_2:14258854-14258873 | Msa0758860:CDS | 40.0% |
! | GTTGATTCCTTTGAGGGATA+TGG | + | chr5_2:14258860-14258879 | Msa0758860:CDS | 40.0% |
GAGGATGATGAAGAAGAAGA+AGG | + | chr5_2:14258966-14258985 | Msa0758860:CDS | 40.0% | |
GATGATGAAGAAGAAGAAGG+TGG | + | chr5_2:14258969-14258988 | Msa0758860:CDS | 40.0% | |
!! | AATCCTAGATGGGCTGTTTA+TGG | + | chr5_2:14259020-14259039 | Msa0758860:CDS | 40.0% |
!! | ATCCTAGATGGGCTGTTTAT+GGG | + | chr5_2:14259021-14259040 | Msa0758860:CDS | 40.0% |
CAATGACACGTAGATACCAA+AGG | - | chr5_2:14259410-14259429 | None:intergenic | 40.0% | |
CTATGTGTCAGTGTCATATC+CGG | + | chr5_2:14259544-14259563 | Msa0758860:intron | 40.0% | |
AGCAACACAGACACATATAC+CGG | - | chr5_2:14259566-14259585 | None:intergenic | 40.0% | |
!! | ACTTCCTTGGTGATGATGTA+TGG | + | chr5_2:14259661-14259680 | Msa0758860:intron | 40.0% |
ATGTCCATACATCATCACCA+AGG | - | chr5_2:14259668-14259687 | None:intergenic | 40.0% | |
TCACAACCTTTGGTACCTAA+TGG | + | chr5_2:14259968-14259987 | Msa0758860:intron | 40.0% | |
AACCTTTGGTACCTAATGGA+TGG | + | chr5_2:14259972-14259991 | Msa0758860:intron | 40.0% | |
! | TTTTGTGTATAGGTCGTCCT+AGG | + | chr5_2:14260149-14260168 | Msa0758860:intron | 40.0% |
TTGTTCCATCGTTGATGTTG+CGG | + | chr5_2:14260364-14260383 | Msa0758860:intron | 40.0% | |
TTTGACCGCTCTTTACAAAG+CGG | + | chr5_2:14260718-14260737 | Msa0758860:CDS | 40.0% | |
GCTCTTTACAAAGCGGTAAT+TGG | + | chr5_2:14260725-14260744 | Msa0758860:CDS | 40.0% | |
TCTCAAGAGACAGTTGGTTA+TGG | - | chr5_2:14260762-14260781 | None:intergenic | 40.0% | |
CAACTGTCTCTTGAGAAACT+CGG | + | chr5_2:14260766-14260785 | Msa0758860:CDS | 40.0% | |
!! | GCTGTTTTCATAAGCTATCC+TGG | + | chr5_2:14261045-14261064 | Msa0758860:intron | 40.0% |
AGACTGTTCAGAAGAGCTTA+TGG | - | chr5_2:14261124-14261143 | None:intergenic | 40.0% | |
AGGATACCAACAGGTAACTA+AGG | - | chr5_2:14261228-14261247 | None:intergenic | 40.0% | |
GTTGTTTATGTGCTGGAAAC+AGG | + | chr5_2:14261269-14261288 | Msa0758860:intron | 40.0% | |
TTTATGTGCTGGAAACAGGA+TGG | + | chr5_2:14261273-14261292 | Msa0758860:intron | 40.0% | |
TTATGTGCTGGAAACAGGAT+GGG | + | chr5_2:14261274-14261293 | Msa0758860:intron | 40.0% | |
TTGTACAGCATAGTGCATCA+AGG | - | chr5_2:14261304-14261323 | None:intergenic | 40.0% | |
TCATTTGCTCTGTCTTAGGA+TGG | + | chr5_2:14261463-14261482 | Msa0758860:intron | 40.0% | |
GTCTGAACAGCAAGATGTAA+TGG | - | chr5_2:14261496-14261515 | None:intergenic | 40.0% | |
! | GTGAAGCTTCTGCTGATTAA+AGG | + | chr5_2:14261532-14261551 | Msa0758860:CDS | 40.0% |
CCCACATTATCTAACACACA+AGG | - | chr5_2:14261629-14261648 | None:intergenic | 40.0% | |
!! | AGATGCTTTTAACGGGTCAT+TGG | + | chr5_2:14261657-14261676 | Msa0758860:intron | 40.0% |
!! | GATGCTTTTAACGGGTCATT+GGG | + | chr5_2:14261658-14261677 | Msa0758860:intron | 40.0% |
!!! | TTGGGTTTTTTGTGGGTTTG+TGG | + | chr5_2:14261676-14261695 | Msa0758860:intron | 40.0% |
AATGGGATGCCGCAATTATA+TGG | - | chr5_2:14261706-14261725 | None:intergenic | 40.0% | |
TGGTAAATATCAGCTGTCAC+TGG | + | chr5_2:14261831-14261850 | Msa0758860:intron | 40.0% | |
!! | AATAGAAGCGGGCTGAATAT+AGG | + | chr5_2:14261881-14261900 | Msa0758860:intron | 40.0% |
ATTTACCTACGAAGCAACAC+AGG | + | chr5_2:14261946-14261965 | Msa0758860:intron | 40.0% | |
GAAAGACTTCCCTGGTTAAT+GGG | - | chr5_2:14262178-14262197 | None:intergenic | 40.0% | |
TACATATCTAGTCCCATGCT+TGG | + | chr5_2:14262297-14262316 | Msa0758860:intron | 40.0% | |
ATTGACTAATCAACGCGTCA+CGG | - | chr5_2:14262370-14262389 | None:intergenic | 40.0% | |
!! | GTCTTTTGTTTGTCTCAGGA+TGG | + | chr5_2:14262667-14262686 | Msa0758860:intron | 40.0% |
TTTGACCAGAGTAAAGGCAA+AGG | - | chr5_2:14262708-14262727 | None:intergenic | 40.0% | |
! | AGCCATTGCTGTGTTTTTCA+TGG | + | chr5_2:14262846-14262865 | Msa0758860:three_prime_UTR | 40.0% |
TGCCATGAAAAACACAGCAA+TGG | - | chr5_2:14262851-14262870 | None:intergenic | 40.0% | |
! | ATTGCTGTGTTTTTCATGGC+AGG | + | chr5_2:14262850-14262869 | Msa0758860:three_prime_UTR | 40.0% |
! | TGGAGAGAAGAAGAGTGTGT+GGG | - | chr5_2:14258451-14258470 | None:intergenic | 45.0% |
! | ATGGAGAGAAGAAGAGTGTG+TGG | - | chr5_2:14258452-14258471 | None:intergenic | 45.0% |
AGATTGAAACTTGCGAGGTG+TGG | - | chr5_2:14258499-14258518 | None:intergenic | 45.0% | |
! | ATTGGCTCAGTTGAAGCCTT+TGG | + | chr5_2:14258917-14258936 | Msa0758860:CDS | 45.0% |
!! | CAGTTGAAGCCTTTGGTTCT+TGG | + | chr5_2:14258924-14258943 | Msa0758860:CDS | 45.0% |
!! | GAAGCCTTTGGTTCTTGGTA+AGG | + | chr5_2:14258929-14258948 | Msa0758860:CDS | 45.0% |
TAGTGCCTAGGAATCCTAGA+TGG | + | chr5_2:14259009-14259028 | Msa0758860:CDS | 45.0% | |
AGTGCCTAGGAATCCTAGAT+GGG | + | chr5_2:14259010-14259029 | Msa0758860:CDS | 45.0% | |
TGTTTATGGGAGAGGTTTCG+AGG | + | chr5_2:14259034-14259053 | Msa0758860:CDS | 45.0% | |
GACTCTGCTGCTATGAAAAC+TGG | + | chr5_2:14259089-14259108 | Msa0758860:CDS | 45.0% | |
TCTGCTGCTATGAAAACTGG+AGG | + | chr5_2:14259092-14259111 | Msa0758860:CDS | 45.0% | |
CTACGTGTCAGTGTCGTATA+TGG | + | chr5_2:14259271-14259290 | Msa0758860:intron | 45.0% | |
! | CTACGTGTCATTGTCACATC+TGG | + | chr5_2:14259417-14259436 | Msa0758860:intron | 45.0% |
!! | TATTGTTTAGGGTGCCGTTC+TGG | + | chr5_2:14259469-14259488 | Msa0758860:intron | 45.0% |
!! | TGGTGCTACTTCACAACCTT+TGG | + | chr5_2:14259958-14259977 | Msa0758860:intron | 45.0% |
TGCCATCCATTAGGTACCAA+AGG | - | chr5_2:14259977-14259996 | None:intergenic | 45.0% | |
TCGTCCTAGGTTGTTTACCA+GGG | + | chr5_2:14260162-14260181 | Msa0758860:CDS | 45.0% | |
GAAGTAGCAACTGACAAGTC+TGG | - | chr5_2:14260217-14260236 | None:intergenic | 45.0% | |
CAGTGATTGTTCACCAGACA+TGG | - | chr5_2:14260250-14260269 | None:intergenic | 45.0% | |
TTACTCCGCAACATCAACGA+TGG | - | chr5_2:14260372-14260391 | None:intergenic | 45.0% | |
! | CTTGCAGCAAAAGTGTGCAA+AGG | - | chr5_2:14260543-14260562 | None:intergenic | 45.0% |
! | TTGCACACTTTTGCTGCAAG+CGG | + | chr5_2:14260543-14260562 | Msa0758860:CDS | 45.0% |
CGAGTTTCTCAAGAGACAGT+TGG | - | chr5_2:14260768-14260787 | None:intergenic | 45.0% | |
CAATGATGAATTCCCGGTGA+GGG | - | chr5_2:14260909-14260928 | None:intergenic | 45.0% | |
ACAATGATGAATTCCCGGTG+AGG | - | chr5_2:14260910-14260929 | None:intergenic | 45.0% | |
TAAGCTATCCTGGGAGCTTA+TGG | + | chr5_2:14261055-14261074 | Msa0758860:intron | 45.0% | |
GCATATTTCCATAAGCTCCC+AGG | - | chr5_2:14261066-14261085 | None:intergenic | 45.0% | |
TATGTGCTGGAAACAGGATG+GGG | + | chr5_2:14261275-14261294 | Msa0758860:intron | 45.0% | |
TACAGCATAGTGCATCAAGG+TGG | - | chr5_2:14261301-14261320 | None:intergenic | 45.0% | |
!!! | ACGGGTCATTGGGTTTTTTG+TGG | + | chr5_2:14261668-14261687 | Msa0758860:intron | 45.0% |
!!! | CGGGTCATTGGGTTTTTTGT+GGG | + | chr5_2:14261669-14261688 | Msa0758860:intron | 45.0% |
CAAGACGCACAAAAAACTCG+CGG | - | chr5_2:14261749-14261768 | None:intergenic | 45.0% | |
!! | AGGTGCTTTTAATGGGTCGT+TGG | + | chr5_2:14261901-14261920 | Msa0758860:intron | 45.0% |
AAGAGATTCGCCCATTAACC+AGG | + | chr5_2:14262165-14262184 | Msa0758860:intron | 45.0% | |
AGAGATTCGCCCATTAACCA+GGG | + | chr5_2:14262166-14262185 | Msa0758860:intron | 45.0% | |
GGAAAGACTTCCCTGGTTAA+TGG | - | chr5_2:14262179-14262198 | None:intergenic | 45.0% | |
TGACTTAGGAAAGACTTCCC+TGG | - | chr5_2:14262186-14262205 | None:intergenic | 45.0% | |
TCGCTAAAGAAGCAAGTGCT+TGG | - | chr5_2:14262272-14262291 | None:intergenic | 45.0% | |
TTCTTCTTATCCCCGTCTGT+CGG | - | chr5_2:14262783-14262802 | None:intergenic | 45.0% | |
!!! | TTTTTTTTTTTTTTTTTGAA+AGG | - | chr5_2:14261798-14261817 | None:intergenic | 5.0% |
!! | AAAAAAAAAAAAAAAAAAAC+GGG | + | chr5_2:14261804-14261823 | Msa0758860:intron | 5.0% |
!!! | ACATTTTTATTTTAAAAAAA+TGG | - | chr5_2:14263005-14263024 | None:intergenic | 5.0% |
! | AAGAAGAGTGTGTGGGGTTG+TGG | - | chr5_2:14258444-14258463 | None:intergenic | 50.0% |
! | GGAGAGAAGAAGAGTGTGTG+GGG | - | chr5_2:14258450-14258469 | None:intergenic | 50.0% |
GACTGTCTTGTCTTCGAGGA+AGG | + | chr5_2:14258606-14258625 | Msa0758860:CDS | 50.0% | |
ACGAGGTTGTTGTCGGAAGT+TGG | - | chr5_2:14258654-14258673 | None:intergenic | 50.0% | |
!! | AAGGTGGGTTGAGTGATGAG+AGG | + | chr5_2:14258985-14259004 | Msa0758860:CDS | 50.0% |
!! | AGGTGGGTTGAGTGATGAGA+GGG | + | chr5_2:14258986-14259005 | Msa0758860:CDS | 50.0% |
! | ACAGCCCATCTAGGATTCCT+AGG | - | chr5_2:14259017-14259036 | None:intergenic | 50.0% |
CTCCCATAAACAGCCCATCT+AGG | - | chr5_2:14259026-14259045 | None:intergenic | 50.0% | |
!! | AGATGGGCTGTTTATGGGAG+AGG | + | chr5_2:14259026-14259045 | Msa0758860:CDS | 50.0% |
ATACGTGTCAGCCACCAGAA+CGG | - | chr5_2:14259486-14259505 | None:intergenic | 50.0% | |
GTCGTCCTAGGTTGTTTACC+AGG | + | chr5_2:14260161-14260180 | Msa0758860:CDS | 50.0% | |
TCCTAGGTTGTTTACCAGGG+AGG | + | chr5_2:14260165-14260184 | Msa0758860:CDS | 50.0% | |
TCCTCCCTGGTAAACAACCT+AGG | - | chr5_2:14260169-14260188 | None:intergenic | 50.0% | |
GTTGTTTACCAGGGAGGAGA+GGG | + | chr5_2:14260171-14260190 | Msa0758860:CDS | 50.0% | |
TTGCTCTGTCTTAGGATGGC+TGG | + | chr5_2:14261467-14261486 | Msa0758860:intron | 50.0% | |
!! | GAATGCCTGTGTTGCTTCGT+AGG | - | chr5_2:14261954-14261973 | None:intergenic | 50.0% |
GCCTTGCAGGAGAAGTGATA+AGG | + | chr5_2:14262400-14262419 | Msa0758860:intron | 50.0% | |
GCCTTATCACTTCTCCTGCA+AGG | - | chr5_2:14262404-14262423 | None:intergenic | 50.0% | |
GAGTAAAGGCAAAGGTCGAG+TGG | - | chr5_2:14262700-14262719 | None:intergenic | 50.0% | |
CTCGACCTTTGCCTTTACTC+TGG | + | chr5_2:14262700-14262719 | Msa0758860:CDS | 50.0% | |
TTATAGACGCTCCCGACAGA+CGG | + | chr5_2:14262768-14262787 | Msa0758860:CDS | 50.0% | |
TCTTCTTATCCCCGTCTGTC+GGG | - | chr5_2:14262782-14262801 | None:intergenic | 50.0% | |
GCAAGCAGCTCTTCAGCATA+TGG | + | chr5_2:14262875-14262894 | Msa0758860:three_prime_UTR | 50.0% | |
CGGAGACTGTCTTGTCTTCG+AGG | + | chr5_2:14258602-14258621 | Msa0758860:CDS | 55.0% | |
GTGATGAGAGGGTAGTGCCT+AGG | + | chr5_2:14258997-14259016 | Msa0758860:CDS | 55.0% | |
CAGGTGCGCTTGACACGTAA+TGG | + | chr5_2:14259213-14259232 | Msa0758860:intron | 55.0% | |
!! | TGTTTAGGGTGCCGTTCTGG+TGG | + | chr5_2:14259472-14259491 | Msa0758860:intron | 55.0% |
GGTTGTTTACCAGGGAGGAG+AGG | + | chr5_2:14260170-14260189 | Msa0758860:CDS | 55.0% | |
CAACAAATCCCTCTCCTCCC+TGG | - | chr5_2:14260182-14260201 | None:intergenic | 55.0% | |
AATCTCAGTCCTCGCCTTGC+AGG | + | chr5_2:14262387-14262406 | Msa0758860:intron | 55.0% | |
ATCACTTCTCCTGCAAGGCG+AGG | - | chr5_2:14262399-14262418 | None:intergenic | 55.0% | |
!! | GTCTGTCGGGAGCGTCTATA+AGG | - | chr5_2:14262769-14262788 | None:intergenic | 55.0% |
TATAGACGCTCCCGACAGAC+GGG | + | chr5_2:14262769-14262788 | Msa0758860:CDS | 55.0% | |
GATGAATTCCCGGTGAGGGC+AGG | - | chr5_2:14260905-14260924 | None:intergenic | 60.0% | |
ATAGACGCTCCCGACAGACG+GGG | + | chr5_2:14262770-14262789 | Msa0758860:CDS | 60.0% | |
CGTGCTCTTCCTGCCCTCAC+CGG | + | chr5_2:14260893-14260912 | Msa0758860:intron | 65.0% | |
GTGCTCTTCCTGCCCTCACC+GGG | + | chr5_2:14260894-14260913 | Msa0758860:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_2 | gene | 14258359 | 14263064 | 14258359 | ID=Msa0758860;Name=Msa0758860 |
chr5_2 | mRNA | 14258359 | 14263064 | 14258359 | ID=Msa0758860-mRNA-1;Parent=Msa0758860;Name=Msa0758860-mRNA-1;_AED=0.11;_eAED=0.11;_QI=22|1|1|1|1|1|7|257|442 |
chr5_2 | exon | 14258359 | 14259113 | 14258359 | ID=Msa0758860-mRNA-1:exon:6413;Parent=Msa0758860-mRNA-1 |
chr5_2 | exon | 14260161 | 14260237 | 14260161 | ID=Msa0758860-mRNA-1:exon:6414;Parent=Msa0758860-mRNA-1 |
chr5_2 | exon | 14260528 | 14260626 | 14260528 | ID=Msa0758860-mRNA-1:exon:6415;Parent=Msa0758860-mRNA-1 |
chr5_2 | exon | 14260713 | 14260811 | 14260713 | ID=Msa0758860-mRNA-1:exon:6416;Parent=Msa0758860-mRNA-1 |
chr5_2 | exon | 14261291 | 14261389 | 14261291 | ID=Msa0758860-mRNA-1:exon:6417;Parent=Msa0758860-mRNA-1 |
chr5_2 | exon | 14261481 | 14261579 | 14261481 | ID=Msa0758860-mRNA-1:exon:6418;Parent=Msa0758860-mRNA-1 |
chr5_2 | exon | 14262685 | 14263064 | 14262685 | ID=Msa0758860-mRNA-1:exon:6419;Parent=Msa0758860-mRNA-1 |
chr5_2 | five_prime_UTR | 14258359 | 14258380 | 14258359 | ID=Msa0758860-mRNA-1:five_prime_utr;Parent=Msa0758860-mRNA-1 |
chr5_2 | CDS | 14258381 | 14259113 | 14258381 | ID=Msa0758860-mRNA-1:cds;Parent=Msa0758860-mRNA-1 |
chr5_2 | CDS | 14260161 | 14260237 | 14260161 | ID=Msa0758860-mRNA-1:cds;Parent=Msa0758860-mRNA-1 |
chr5_2 | CDS | 14260528 | 14260626 | 14260528 | ID=Msa0758860-mRNA-1:cds;Parent=Msa0758860-mRNA-1 |
chr5_2 | CDS | 14260713 | 14260811 | 14260713 | ID=Msa0758860-mRNA-1:cds;Parent=Msa0758860-mRNA-1 |
chr5_2 | CDS | 14261291 | 14261389 | 14261291 | ID=Msa0758860-mRNA-1:cds;Parent=Msa0758860-mRNA-1 |
chr5_2 | CDS | 14261481 | 14261579 | 14261481 | ID=Msa0758860-mRNA-1:cds;Parent=Msa0758860-mRNA-1 |
chr5_2 | CDS | 14262685 | 14262807 | 14262685 | ID=Msa0758860-mRNA-1:cds;Parent=Msa0758860-mRNA-1 |
chr5_2 | three_prime_UTR | 14262808 | 14263064 | 14262808 | ID=Msa0758860-mRNA-1:three_prime_utr;Parent=Msa0758860-mRNA-1 |
Gene Sequence |
Protein sequence |