Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0127740 | XP_013470272.1 | 98.765 | 243 | 3 | 0 | 1 | 243 | 1 | 243 | 2.57e-174 | 489 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0127740 | sp|P76093|YNBD_ECOLI | 29.609 | 179 | 107 | 4 | 60 | 232 | 263 | 428 | 2.52e-13 | 72.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0127740 | A0A072W222 | 98.765 | 243 | 3 | 0 | 1 | 243 | 1 | 243 | 1.23e-174 | 489 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002690 | Msa0127740 | -0.815670 | 8.209355e-52 | -8.615850e-47 |
| Msa0002700 | Msa0127740 | -0.806726 | 7.150601e-50 | -8.615850e-47 |
| Msa0004180 | Msa0127740 | -0.818711 | 1.699256e-52 | -8.615850e-47 |
| Msa0007570 | Msa0127740 | -0.814094 | 1.835145e-51 | -8.615850e-47 |
| Msa0011060 | Msa0127740 | -0.807098 | 5.967990e-50 | -8.615850e-47 |
| Msa0011100 | Msa0127740 | -0.821283 | 4.384862e-53 | -8.615850e-47 |
| Msa0011410 | Msa0127740 | -0.810258 | 1.260632e-50 | -8.615850e-47 |
| Msa0011440 | Msa0127740 | -0.816099 | 6.584128e-52 | -8.615850e-47 |
| Msa0016380 | Msa0127740 | -0.815581 | 8.589066e-52 | -8.615850e-47 |
| Msa0017710 | Msa0127740 | 0.855539 | 5.893454e-62 | -8.615850e-47 |
| Msa0030760 | Msa0127740 | -0.829096 | 6.231192e-55 | -8.615850e-47 |
| Msa0033190 | Msa0127740 | -0.818750 | 1.665143e-52 | -8.615850e-47 |
| Msa0038750 | Msa0127740 | -0.828733 | 7.630445e-55 | -8.615850e-47 |
| Msa0039780 | Msa0127740 | -0.819885 | 9.181315e-53 | -8.615850e-47 |
| Msa0042130 | Msa0127740 | -0.800203 | 1.608909e-48 | -8.615850e-47 |
| Msa0042210 | Msa0127740 | -0.807734 | 4.374065e-50 | -8.615850e-47 |
| Msa0044080 | Msa0127740 | 0.803484 | 3.410225e-49 | -8.615850e-47 |
| Msa0059420 | Msa0127740 | 0.801549 | 8.543510e-49 | -8.615850e-47 |
| Msa0062160 | Msa0127740 | 0.806444 | 8.201353e-50 | -8.615850e-47 |
| Msa0069590 | Msa0127740 | -0.812206 | 4.763622e-51 | -8.615850e-47 |
| Msa0070120 | Msa0127740 | 0.803804 | 2.927077e-49 | -8.615850e-47 |
| Msa0076990 | Msa0127740 | -0.804874 | 1.752172e-49 | -8.615850e-47 |
| Msa0078160 | Msa0127740 | -0.842914 | 1.932247e-58 | -8.615850e-47 |
| Msa0078170 | Msa0127740 | -0.825288 | 5.085644e-54 | -8.615850e-47 |
| Msa0079840 | Msa0127740 | -0.821317 | 4.305528e-53 | -8.615850e-47 |
| Msa0080100 | Msa0127740 | -0.819161 | 1.342701e-52 | -8.615850e-47 |
| Msa0087370 | Msa0127740 | -0.824482 | 7.881054e-54 | -8.615850e-47 |
| Msa0089470 | Msa0127740 | -0.805977 | 1.028699e-49 | -8.615850e-47 |
| Msa0090650 | Msa0127740 | 0.925530 | 1.620527e-90 | -8.615850e-47 |
| Msa0095910 | Msa0127740 | 0.809483 | 1.850478e-50 | -8.615850e-47 |
| Msa0105140 | Msa0127740 | -0.812172 | 4.845696e-51 | -8.615850e-47 |
| Msa0107830 | Msa0127740 | 0.800027 | 1.747498e-48 | -8.615850e-47 |
| Msa0111000 | Msa0127740 | -0.803870 | 2.836397e-49 | -8.615850e-47 |
| Msa0116780 | Msa0127740 | -0.817508 | 3.179233e-52 | -8.615850e-47 |
| Msa0117650 | Msa0127740 | 0.820176 | 7.875379e-53 | -8.615850e-47 |
| Msa0124460 | Msa0127740 | -0.804409 | 2.190322e-49 | -8.615850e-47 |
| Msa0127110 | Msa0127740 | -0.802201 | 6.277934e-49 | -8.615850e-47 |
| Msa0127740 | Msa0132920 | -0.809889 | 1.513867e-50 | -8.615850e-47 |
| Msa0127740 | Msa0134120 | -0.824166 | 9.351995e-54 | -8.615850e-47 |
| Msa0127740 | Msa0136180 | -0.808803 | 2.588027e-50 | -8.615850e-47 |
| Msa0127740 | Msa0138340 | -0.801471 | 8.866768e-49 | -8.615850e-47 |
| Msa0127740 | Msa0140870 | -0.801333 | 9.459870e-49 | -8.615850e-47 |
| Msa0127740 | Msa0147960 | -0.802440 | 5.603909e-49 | -8.615850e-47 |
| Msa0127740 | Msa0160080 | -0.802884 | 4.539674e-49 | -8.615850e-47 |
| Msa0127740 | Msa0163690 | 0.813602 | 2.355130e-51 | -8.615850e-47 |
| Msa0127740 | Msa0168470 | -0.810613 | 1.056596e-50 | -8.615850e-47 |
| Msa0127740 | Msa0170730 | -0.811765 | 5.943284e-51 | -8.615850e-47 |
| Msa0127740 | Msa0175240 | -0.838044 | 3.632992e-57 | -8.615850e-47 |
| Msa0127740 | Msa0183770 | 0.892516 | 1.476713e-74 | -8.615850e-47 |
| Msa0127740 | Msa0185040 | 0.806328 | 8.678526e-50 | -8.615850e-47 |
| Msa0127740 | Msa0190470 | -0.802379 | 5.769057e-49 | -8.615850e-47 |
| Msa0127740 | Msa0209370 | -0.807483 | 4.943566e-50 | -8.615850e-47 |
| Msa0127740 | Msa0211600 | -0.820327 | 7.271620e-53 | -8.615850e-47 |
| Msa0127740 | Msa0227970 | -0.825887 | 3.669029e-54 | -8.615850e-47 |
| Msa0127740 | Msa0232660 | -0.800619 | 1.323631e-48 | -8.615850e-47 |
| Msa0127740 | Msa0234150 | 0.827024 | 1.966052e-54 | -8.615850e-47 |
| Msa0127740 | Msa0236690 | -0.817187 | 3.755029e-52 | -8.615850e-47 |
| Msa0127740 | Msa0238330 | 0.804668 | 1.934196e-49 | -8.615850e-47 |
| Msa0127740 | Msa0267450 | -0.820351 | 7.181308e-53 | -8.615850e-47 |
| Msa0127740 | Msa0267510 | -0.817714 | 2.857842e-52 | -8.615850e-47 |
| Msa0127740 | Msa0269660 | -0.820545 | 6.481889e-53 | -8.615850e-47 |
| Msa0127740 | Msa0271700 | 0.826844 | 2.170015e-54 | -8.615850e-47 |
| Msa0127740 | Msa0271720 | 0.824307 | 8.664558e-54 | -8.615850e-47 |
| Msa0127740 | Msa0273780 | -0.803801 | 2.931606e-49 | -8.615850e-47 |
| Msa0127740 | Msa0275730 | 0.804756 | 1.854452e-49 | -8.615850e-47 |
| Msa0127740 | Msa0279800 | -0.801238 | 9.893191e-49 | -8.615850e-47 |
| Msa0127740 | Msa0287480 | 0.819798 | 9.610697e-53 | -8.615850e-47 |
| Msa0127740 | Msa0304060 | -0.801744 | 7.793241e-49 | -8.615850e-47 |
| Msa0127740 | Msa0307630 | 0.852086 | 5.815513e-61 | -8.615850e-47 |
| Msa0127740 | Msa0307820 | -0.806284 | 8.863408e-50 | -8.615850e-47 |
| Msa0127740 | Msa0310190 | 0.817047 | 4.037839e-52 | -8.615850e-47 |
| Msa0127740 | Msa0346170 | 0.810306 | 1.230676e-50 | -8.615850e-47 |
| Msa0127740 | Msa0347320 | 0.809730 | 1.637656e-50 | -8.615850e-47 |
| Msa0127740 | Msa0367600 | -0.855844 | 4.803050e-62 | -8.615850e-47 |
| Msa0127740 | Msa0368190 | -0.818806 | 1.617537e-52 | -8.615850e-47 |
| Msa0127740 | Msa0369080 | -0.800235 | 1.585086e-48 | -8.615850e-47 |
| Msa0127740 | Msa0369430 | -0.819049 | 1.424357e-52 | -8.615850e-47 |
| Msa0127740 | Msa0375930 | -0.818428 | 1.970392e-52 | -8.615850e-47 |
| Msa0127740 | Msa0382060 | -0.800185 | 1.622939e-48 | -8.615850e-47 |
| Msa0127740 | Msa0385850 | -0.813881 | 2.044615e-51 | -8.615850e-47 |
| Msa0127740 | Msa0386230 | -0.801875 | 7.325304e-49 | -8.615850e-47 |
| Msa0127740 | Msa0387630 | -0.801196 | 1.009213e-48 | -8.615850e-47 |
| Msa0127740 | Msa0390200 | 0.804043 | 2.609898e-49 | -8.615850e-47 |
| Msa0127740 | Msa0412580 | -0.813825 | 2.103497e-51 | -8.615850e-47 |
| Msa0127740 | Msa0415210 | -0.848613 | 5.481085e-60 | -8.615850e-47 |
| Msa0127740 | Msa0416430 | -0.817220 | 3.691891e-52 | -8.615850e-47 |
| Msa0127740 | Msa0420280 | -0.817101 | 3.926863e-52 | -8.615850e-47 |
| Msa0127740 | Msa0424570 | -0.816495 | 5.369842e-52 | -8.615850e-47 |
| Msa0127740 | Msa0430040 | -0.819463 | 1.146165e-52 | -8.615850e-47 |
| Msa0127740 | Msa0433890 | -0.815530 | 8.819474e-52 | -8.615850e-47 |
| Msa0127740 | Msa0434460 | 0.800785 | 1.224295e-48 | -8.615850e-47 |
| Msa0127740 | Msa0446110 | -0.813313 | 2.727105e-51 | -8.615850e-47 |
| Msa0127740 | Msa0449490 | 0.800204 | 1.607971e-48 | -8.615850e-47 |
| Msa0127740 | Msa0450890 | -0.814185 | 1.752565e-51 | -8.615850e-47 |
| Msa0127740 | Msa0457070 | -0.804361 | 2.241738e-49 | -8.615850e-47 |
| Msa0127740 | Msa0461150 | -0.831221 | 1.887085e-55 | -8.615850e-47 |
| Msa0127740 | Msa0463030 | -0.803361 | 3.616443e-49 | -8.615850e-47 |
| Msa0127740 | Msa0464310 | 0.804115 | 2.522019e-49 | -8.615850e-47 |
| Msa0127740 | Msa0469770 | -0.826552 | 2.547659e-54 | -8.615850e-47 |
| Msa0127740 | Msa0469840 | -0.805901 | 1.067323e-49 | -8.615850e-47 |
| Msa0127740 | Msa0471130 | -0.802773 | 4.785749e-49 | -8.615850e-47 |
| Msa0127740 | Msa0474630 | -0.825053 | 5.781960e-54 | -8.615850e-47 |
| Msa0127740 | Msa0483090 | -0.814370 | 1.594967e-51 | -8.615850e-47 |
| Msa0127740 | Msa0483410 | -0.802605 | 5.181771e-49 | -8.615850e-47 |
| Msa0127740 | Msa0487480 | -0.800096 | 1.691379e-48 | -8.615850e-47 |
| Msa0127740 | Msa0489370 | 0.808194 | 3.490530e-50 | -8.615850e-47 |
| Msa0127740 | Msa0506700 | -0.803272 | 3.773986e-49 | -8.615850e-47 |
| Msa0127740 | Msa0508620 | -0.807818 | 4.197115e-50 | -8.615850e-47 |
| Msa0127740 | Msa0508660 | -0.806080 | 9.785025e-50 | -8.615850e-47 |
| Msa0127740 | Msa0516000 | -0.820174 | 7.885240e-53 | -8.615850e-47 |
| Msa0127740 | Msa0524710 | 0.806938 | 6.451672e-50 | -8.615850e-47 |
| Msa0127740 | Msa0524730 | -0.804860 | 1.763891e-49 | -8.615850e-47 |
| Msa0127740 | Msa0525180 | -0.802867 | 4.575625e-49 | -8.615850e-47 |
| Msa0127740 | Msa0527210 | -0.802356 | 5.832765e-49 | -8.615850e-47 |
| Msa0127740 | Msa0530220 | -0.804641 | 1.959361e-49 | -8.615850e-47 |
| Msa0127740 | Msa0531050 | 0.807503 | 4.896636e-50 | -8.615850e-47 |
| Msa0127740 | Msa0538020 | -0.800705 | 1.271558e-48 | -8.615850e-47 |
| Msa0127740 | Msa0550980 | -0.812110 | 4.998228e-51 | -8.615850e-47 |
| Msa0127740 | Msa0558010 | -0.807102 | 5.956303e-50 | -8.615850e-47 |
| Msa0127740 | Msa0559440 | -0.800765 | 1.235948e-48 | -8.615850e-47 |
| Msa0127740 | Msa0574230 | -0.801917 | 7.181519e-49 | -8.615850e-47 |
| Msa0127740 | Msa0576510 | -0.808317 | 3.286070e-50 | -8.615850e-47 |
| Msa0127740 | Msa0580410 | -0.831502 | 1.609329e-55 | -8.615850e-47 |
| Msa0127740 | Msa0585720 | -0.816279 | 6.001294e-52 | -8.615850e-47 |
| Msa0127740 | Msa0588040 | 0.830380 | 3.034795e-55 | -8.615850e-47 |
| Msa0127740 | Msa0597370 | -0.828080 | 1.096456e-54 | -8.615850e-47 |
| Msa0127740 | Msa0597800 | 0.806962 | 6.375697e-50 | -8.615850e-47 |
| Msa0127740 | Msa0597820 | 0.813268 | 2.789720e-51 | -8.615850e-47 |
| Msa0127740 | Msa0603180 | -0.812765 | 3.595191e-51 | -8.615850e-47 |
| Msa0127740 | Msa0606340 | -0.813914 | 2.010915e-51 | -8.615850e-47 |
| Msa0127740 | Msa0610190 | 0.803366 | 3.608449e-49 | -8.615850e-47 |
| Msa0127740 | Msa0616890 | -0.803934 | 2.750291e-49 | -8.615850e-47 |
| Msa0127740 | Msa0619030 | -0.810670 | 1.027207e-50 | -8.615850e-47 |
| Msa0127740 | Msa0619450 | -0.813139 | 2.976738e-51 | -8.615850e-47 |
| Msa0127740 | Msa0619530 | -0.802608 | 5.175576e-49 | -8.615850e-47 |
| Msa0127740 | Msa0622800 | -0.800016 | 1.756164e-48 | -8.615850e-47 |
| Msa0127740 | Msa0624260 | -0.800898 | 1.161312e-48 | -8.615850e-47 |
| Msa0127740 | Msa0624360 | -0.809689 | 1.671481e-50 | -8.615850e-47 |
| Msa0127740 | Msa0625900 | -0.810898 | 9.169379e-51 | -8.615850e-47 |
| Msa0127740 | Msa0628200 | 0.822349 | 2.484856e-53 | -8.615850e-47 |
| Msa0127740 | Msa0634900 | -0.815725 | 7.979220e-52 | -8.615850e-47 |
| Msa0127740 | Msa0636840 | -0.805382 | 1.371177e-49 | -8.615850e-47 |
| Msa0127740 | Msa0638300 | -0.804260 | 2.352174e-49 | -8.615850e-47 |
| Msa0127740 | Msa0638550 | -0.805045 | 1.613038e-49 | -8.615850e-47 |
| Msa0127740 | Msa0644220 | -0.801306 | 9.584248e-49 | -8.615850e-47 |
| Msa0127740 | Msa0644340 | 0.801575 | 8.439919e-49 | -8.615850e-47 |
| Msa0127740 | Msa0654500 | -0.804458 | 2.139552e-49 | -8.615850e-47 |
| Msa0127740 | Msa0656570 | -0.819106 | 1.381995e-52 | -8.615850e-47 |
| Msa0127740 | Msa0659230 | 0.800829 | 1.199275e-48 | -8.615850e-47 |
| Msa0127740 | Msa0659580 | -0.813500 | 2.480968e-51 | -8.615850e-47 |
| Msa0127740 | Msa0661330 | 0.800838 | 1.194231e-48 | -8.615850e-47 |
| Msa0127740 | Msa0661540 | -0.802751 | 4.834294e-49 | -8.615850e-47 |
| Msa0127740 | Msa0662140 | -0.802546 | 5.329597e-49 | -8.615850e-47 |
| Msa0127740 | Msa0663580 | -0.818549 | 1.850014e-52 | -8.615850e-47 |
| Msa0127740 | Msa0663690 | -0.813369 | 2.651013e-51 | -8.615850e-47 |
| Msa0127740 | Msa0680460 | 0.809877 | 1.522570e-50 | -8.615850e-47 |
| Msa0127740 | Msa0681100 | -0.816535 | 5.259163e-52 | -8.615850e-47 |
| Msa0127740 | Msa0684030 | -0.813866 | 2.060356e-51 | -8.615850e-47 |
| Msa0127740 | Msa0690100 | -0.806044 | 9.959720e-50 | -8.615850e-47 |
| Msa0127740 | Msa0699170 | 0.804539 | 2.058305e-49 | -8.615850e-47 |
| Msa0127740 | Msa0700870 | -0.807091 | 5.986387e-50 | -8.615850e-47 |
| Msa0127740 | Msa0700930 | -0.811217 | 7.816581e-51 | -8.615850e-47 |
| Msa0127740 | Msa0704790 | -0.806258 | 8.975960e-50 | -8.615850e-47 |
| Msa0127740 | Msa0718770 | 0.804437 | 2.161433e-49 | -8.615850e-47 |
| Msa0127740 | Msa0719330 | -0.825993 | 3.461674e-54 | -8.615850e-47 |
| Msa0127740 | Msa0729740 | -0.813209 | 2.874344e-51 | -8.615850e-47 |
| Msa0127740 | Msa0730250 | -0.804544 | 2.052956e-49 | -8.615850e-47 |
| Msa0127740 | Msa0731580 | 0.805877 | 1.079439e-49 | -8.615850e-47 |
| Msa0127740 | Msa0738680 | 0.844212 | 8.697172e-59 | -8.615850e-47 |
| Msa0127740 | Msa0745270 | -0.820617 | 6.240458e-53 | -8.615850e-47 |
| Msa0127740 | Msa0745630 | -0.800523 | 1.384748e-48 | -8.615850e-47 |
| Msa0127740 | Msa0750490 | -0.820849 | 5.519958e-53 | -8.615850e-47 |
| Msa0127740 | Msa0750830 | 0.809670 | 1.686970e-50 | -8.615850e-47 |
| Msa0127740 | Msa0751510 | 0.809302 | 2.023809e-50 | -8.615850e-47 |
| Msa0127740 | Msa0754790 | -0.823446 | 1.379208e-53 | -8.615850e-47 |
| Msa0127740 | Msa0766910 | -0.807958 | 3.919397e-50 | -8.615850e-47 |
| Msa0127740 | Msa0772160 | -0.814662 | 1.374377e-51 | -8.615850e-47 |
| Msa0127740 | Msa0786600 | -0.838385 | 2.968478e-57 | -8.615850e-47 |
| Msa0127740 | Msa0792410 | 0.853794 | 1.887975e-61 | -8.615850e-47 |
| Msa0127740 | Msa0793270 | 0.803747 | 3.008095e-49 | -8.615850e-47 |
| Msa0127740 | Msa0795910 | -0.832992 | 6.887190e-56 | -8.615850e-47 |
| Msa0127740 | Msa0799120 | 0.804816 | 1.801694e-49 | -8.615850e-47 |
| Msa0127740 | Msa0802600 | 0.826903 | 2.101271e-54 | -8.615850e-47 |
| Msa0127740 | Msa0809920 | 0.810439 | 1.151878e-50 | -8.615850e-47 |
| Msa0127740 | Msa0810340 | 0.811632 | 6.353756e-51 | -8.615850e-47 |
| Msa0127740 | Msa0812020 | -0.804932 | 1.703995e-49 | -8.615850e-47 |
| Msa0127740 | Msa0819150 | 0.843035 | 1.794804e-58 | -8.615850e-47 |
| Msa0127740 | Msa0822680 | -0.838181 | 3.350178e-57 | -8.615850e-47 |
| Msa0127740 | Msa0829250 | -0.815581 | 8.589066e-52 | -8.615850e-47 |
| Msa0127740 | Msa0829990 | 0.815621 | 8.418814e-52 | -8.615850e-47 |
| Msa0127740 | Msa0833360 | -0.835387 | 1.728864e-56 | -8.615850e-47 |
| Msa0127740 | Msa0850480 | 0.802560 | 5.293253e-49 | -8.615850e-47 |
| Msa0127740 | Msa0859270 | 0.809177 | 2.152494e-50 | -8.615850e-47 |
| Msa0127740 | Msa0866510 | -0.825964 | 3.516257e-54 | -8.615850e-47 |
| Msa0127740 | Msa0873070 | -0.824561 | 7.551696e-54 | -8.615850e-47 |
| Msa0127740 | Msa0880170 | -0.800507 | 1.395509e-48 | -8.615850e-47 |
| Msa0127740 | Msa0896920 | 0.803561 | 3.287044e-49 | -8.615850e-47 |
| Msa0127740 | Msa0899080 | -0.826862 | 2.149254e-54 | -8.615850e-47 |
| Msa0127740 | Msa0928060 | -0.806813 | 6.854588e-50 | -8.615850e-47 |
| Msa0127740 | Msa0930150 | -0.812778 | 3.572365e-51 | -8.615850e-47 |
| Msa0127740 | Msa0932900 | 0.808942 | 2.416455e-50 | -8.615850e-47 |
| Msa0127740 | Msa0936630 | 0.805864 | 1.086643e-49 | -8.615850e-47 |
| Msa0127740 | Msa0938150 | -0.803180 | 3.942018e-49 | -8.615850e-47 |
| Msa0127740 | Msa0941320 | -0.808985 | 2.366346e-50 | -8.615850e-47 |
| Msa0127740 | Msa0961200 | -0.834636 | 2.672716e-56 | -8.615850e-47 |
| Msa0127740 | Msa0968970 | -0.844256 | 8.463558e-59 | -8.615850e-47 |
| Msa0127740 | Msa0975260 | -0.809173 | 2.156297e-50 | -8.615850e-47 |
| Msa0127740 | Msa0976400 | 0.807497 | 4.910286e-50 | -8.615850e-47 |
| Msa0127740 | Msa1004300 | -0.803183 | 3.935943e-49 | -8.615850e-47 |
| Msa0127740 | Msa1019370 | -0.805216 | 1.485466e-49 | -8.615850e-47 |
| Msa0127740 | Msa1020160 | -0.815908 | 7.265450e-52 | -8.615850e-47 |
| Msa0127740 | Msa1030210 | 0.803864 | 2.843441e-49 | -8.615850e-47 |
| Msa0127740 | Msa1033460 | -0.810092 | 1.369069e-50 | -8.615850e-47 |
| Msa0127740 | Msa1035050 | 0.837067 | 6.468681e-57 | -8.615850e-47 |
| Msa0127740 | Msa1039150 | -0.821619 | 3.666317e-53 | -8.615850e-47 |
| Msa0127740 | Msa1040330 | 0.831185 | 1.926495e-55 | -8.615850e-47 |
| Msa0127740 | Msa1042420 | -0.815146 | 1.073629e-51 | -8.615850e-47 |
| Msa0127740 | Msa1044050 | -0.827915 | 1.201585e-54 | -8.615850e-47 |
| Msa0127740 | Msa1058550 | -0.801061 | 1.075210e-48 | -8.615850e-47 |
| Msa0127740 | Msa1069250 | 0.803141 | 4.015699e-49 | -8.615850e-47 |
| Msa0127740 | Msa1073140 | -0.811719 | 6.083164e-51 | -8.615850e-47 |
| Msa0127740 | Msa1075090 | 0.833137 | 6.339749e-56 | -8.615850e-47 |
| Msa0127740 | Msa1078120 | -0.819180 | 1.329818e-52 | -8.615850e-47 |
| Msa0127740 | Msa1078210 | -0.817618 | 3.003488e-52 | -8.615850e-47 |
| Msa0127740 | Msa1083660 | -0.826512 | 2.604346e-54 | -8.615850e-47 |
| Msa0127740 | Msa1085820 | 0.800864 | 1.179612e-48 | -8.615850e-47 |
| Msa0127740 | Msa1087380 | 0.801739 | 7.812905e-49 | -8.615850e-47 |
| Msa0127740 | Msa1100330 | 0.805237 | 1.470743e-49 | -8.615850e-47 |
| Msa0127740 | Msa1103450 | 0.811035 | 8.562392e-51 | -8.615850e-47 |
| Msa0127740 | Msa1106730 | -0.822478 | 2.318296e-53 | -8.615850e-47 |
| Msa0127740 | Msa1107220 | 0.802296 | 6.000389e-49 | -8.615850e-47 |
| Msa0127740 | Msa1112210 | -0.802318 | 5.938167e-49 | -8.615850e-47 |
| Msa0127740 | Msa1115980 | 0.813586 | 2.375163e-51 | -8.615850e-47 |
| Msa0127740 | Msa1123440 | -0.807652 | 4.552770e-50 | -8.615850e-47 |
| Msa0127740 | Msa1129120 | -0.810516 | 1.108797e-50 | -8.615850e-47 |
| Msa0127740 | Msa1129660 | -0.815447 | 9.203268e-52 | -8.615850e-47 |
| Msa0127740 | Msa1130150 | -0.806683 | 7.301072e-50 | -8.615850e-47 |
| Msa0127740 | Msa1131120 | 0.814275 | 1.674045e-51 | -8.615850e-47 |
| Msa0127740 | Msa1131300 | -0.822486 | 2.308941e-53 | -8.615850e-47 |
| Msa0127740 | Msa1132880 | -0.831239 | 1.868137e-55 | -8.615850e-47 |
| Msa0127740 | Msa1137750 | 0.810993 | 8.743734e-51 | -8.615850e-47 |
| Msa0127740 | Msa1147010 | 0.818551 | 1.848188e-52 | -8.615850e-47 |
| Msa0127740 | Msa1147600 | -0.800086 | 1.699528e-48 | -8.615850e-47 |
| Msa0127740 | Msa1156100 | -0.806504 | 7.967868e-50 | -8.615850e-47 |
| Msa0127740 | Msa1160470 | -0.800112 | 1.679417e-48 | -8.615850e-47 |
| Msa0127740 | Msa1161550 | -0.827524 | 1.492139e-54 | -8.615850e-47 |
| Msa0127740 | Msa1162430 | 0.804483 | 2.113783e-49 | -8.615850e-47 |
| Msa0127740 | Msa1165860 | 0.805644 | 1.208225e-49 | -8.615850e-47 |
| Msa0127740 | Msa1177650 | 0.800406 | 1.462931e-48 | -8.615850e-47 |
| Msa0127740 | Msa1182530 | -0.809502 | 1.833534e-50 | -8.615850e-47 |
| Msa0127740 | Msa1191270 | 0.811598 | 6.462509e-51 | -8.615850e-47 |
| Msa0127740 | Msa1191530 | -0.812168 | 4.855638e-51 | -8.615850e-47 |
| Msa0127740 | Msa1197740 | -0.803527 | 3.340620e-49 | -8.615850e-47 |
| Msa0127740 | Msa1199540 | -0.817152 | 3.824216e-52 | -8.615850e-47 |
| Msa0127740 | Msa1203320 | -0.807812 | 4.210073e-50 | -8.615850e-47 |
| Msa0127740 | Msa1212150 | -0.800331 | 1.515553e-48 | -8.615850e-47 |
| Msa0127740 | Msa1222400 | 0.815167 | 1.061937e-51 | -8.615850e-47 |
| Msa0127740 | Msa1223540 | 0.815153 | 1.069724e-51 | -8.615850e-47 |
| Msa0127740 | Msa1223620 | 0.826511 | 2.606596e-54 | -8.615850e-47 |
| Msa0127740 | Msa1223710 | 0.804581 | 2.017118e-49 | -8.615850e-47 |
| Msa0127740 | Msa1223960 | 0.825958 | 3.527838e-54 | -8.615850e-47 |
| Msa0127740 | Msa1223990 | 0.817323 | 3.500602e-52 | -8.615850e-47 |
| Msa0127740 | Msa1225240 | -0.808420 | 3.124232e-50 | -8.615850e-47 |
| Msa0127740 | Msa1228600 | -0.818189 | 2.232361e-52 | -8.615850e-47 |
| Msa0127740 | Msa1239190 | 0.822886 | 1.863045e-53 | -8.615850e-47 |
| Msa0127740 | Msa1239210 | 0.802646 | 5.081393e-49 | -8.615850e-47 |
| Msa0127740 | Msa1240240 | -0.818884 | 1.552846e-52 | -8.615850e-47 |
| Msa0127740 | Msa1257860 | -0.803969 | 2.704262e-49 | -8.615850e-47 |
| Msa0127740 | Msa1263110 | 0.803751 | 3.001381e-49 | -8.615850e-47 |
| Msa0127740 | Msa1263520 | 0.814931 | 1.198263e-51 | -8.615850e-47 |
| Msa0127740 | Msa1266120 | -0.818924 | 1.520440e-52 | -8.615850e-47 |
| Msa0127740 | Msa1269200 | 0.826843 | 2.171144e-54 | -8.615850e-47 |
| Msa0127740 | Msa1270860 | -0.812134 | 4.938360e-51 | -8.615850e-47 |
| Msa0127740 | Msa1278080 | -0.809195 | 2.133640e-50 | -8.615850e-47 |
| Msa0127740 | Msa1279200 | -0.816418 | 5.587186e-52 | -8.615850e-47 |
| Msa0127740 | Msa1279250 | -0.804414 | 2.185299e-49 | -8.615850e-47 |
| Msa0127740 | Msa1295210 | -0.802177 | 6.348005e-49 | -8.615850e-47 |
| Msa0127740 | Msa1317740 | 0.820013 | 8.583621e-53 | -8.615850e-47 |
| Msa0127740 | Msa1320160 | 0.808384 | 3.180966e-50 | -8.615850e-47 |
| Msa0127740 | Msa1320660 | -0.817399 | 3.365134e-52 | -8.615850e-47 |
| Msa0127740 | Msa1328680 | -0.812089 | 5.051599e-51 | -8.615850e-47 |
| Msa0127740 | Msa1331530 | -0.801828 | 7.488511e-49 | -8.615850e-47 |
| Msa0127740 | Msa1335200 | -0.803510 | 3.368933e-49 | -8.615850e-47 |
| Msa0127740 | Msa1335210 | -0.802935 | 4.431041e-49 | -8.615850e-47 |
| Msa0127740 | Msa1357840 | 0.819905 | 9.084221e-53 | -8.615850e-47 |
| Msa0127740 | Msa1361580 | -0.814070 | 1.857594e-51 | -8.615850e-47 |
| Msa0127740 | Msa1364690 | 0.808122 | 3.616829e-50 | -8.615850e-47 |
| Msa0127740 | Msa1369390 | -0.809739 | 1.630341e-50 | -8.615850e-47 |
| Msa0127740 | Msa1369400 | -0.809182 | 2.147406e-50 | -8.615850e-47 |
| Msa0127740 | Msa1371540 | -0.810406 | 1.170907e-50 | -8.615850e-47 |
| Msa0127740 | Msa1379270 | -0.800642 | 1.309874e-48 | -8.615850e-47 |
| Msa0127740 | Msa1381300 | -0.827621 | 1.414268e-54 | -8.615850e-47 |
| Msa0127740 | Msa1382100 | -0.817039 | 4.055248e-52 | -8.615850e-47 |
| Msa0127740 | Msa1386180 | -0.823525 | 1.321998e-53 | -8.615850e-47 |
| Msa0127740 | Msa1387530 | 0.803032 | 4.229709e-49 | -8.615850e-47 |
| Msa0127740 | Msa1388720 | -0.811800 | 5.840883e-51 | -8.615850e-47 |
| Msa0127740 | Msa1392570 | -0.815342 | 9.709418e-52 | -8.615850e-47 |
| Msa0127740 | Msa1398150 | -0.810355 | 1.201305e-50 | -8.615850e-47 |
| Msa0127740 | Msa1401000 | -0.804255 | 2.358135e-49 | -8.615850e-47 |
| Msa0127740 | Msa1405040 | -0.823154 | 1.613467e-53 | -8.615850e-47 |
| Msa0127740 | Msa1406540 | 0.818646 | 1.758643e-52 | -8.615850e-47 |
| Msa0127740 | Msa1408230 | -0.801309 | 9.570014e-49 | -8.615850e-47 |
| Msa0127740 | Msa1410500 | -0.805792 | 1.125133e-49 | -8.615850e-47 |
| Msa0127740 | Msa1421490 | -0.805983 | 1.025533e-49 | -8.615850e-47 |
| Msa0127740 | Msa1432730 | -0.822533 | 2.251564e-53 | -8.615850e-47 |
| Msa0127740 | Msa1437590 | 0.806516 | 7.921267e-50 | -8.615850e-47 |
| Msa0127740 | Msa1439000 | -0.812053 | 5.143900e-51 | -8.615850e-47 |
| Msa0127740 | Msa1439400 | -0.801591 | 8.374928e-49 | -8.615850e-47 |
| Msa0127740 | Msa1448410 | -0.808132 | 3.599329e-50 | -8.615850e-47 |
| Msa0127740 | Msa1451200 | -0.826355 | 2.839302e-54 | -8.615850e-47 |
| Msa0127740 | Msa1452800 | -0.806712 | 7.199924e-50 | -8.615850e-47 |
| Msa0127740 | Msa1458530 | 0.857990 | 1.119855e-62 | -8.615850e-47 |
| Msa0127740 | Msa1459680 | -0.825467 | 4.614011e-54 | -8.615850e-47 |
| Msa0127740 | Msa1462610 | 0.854630 | 1.083312e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0127740 | MtrunA17_Chr1g0210681 | 98.765 | 243 | 3 | 0 | 1 | 243 | 1 | 243 | 2.36e-178 | 489 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 86 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATAGTCTTTGTTTGTTATT+TGG | 0.213171 | 1_3:-57335754 | None:intergenic |
| ATTTCCCCGATCTCGATTTC+AGG | 0.229683 | 1_3:+57335774 | Msa0127740:five_prime_UTR |
| TATATGGCAGTAAATTTAAT+TGG | 0.237039 | 1_3:+57338679 | Msa0127740:three_prime_UTR |
| GGTATGCGAAGATTAGTAAT+AGG | 0.261485 | 1_3:-57335915 | None:intergenic |
| ATCGATCTTCCCTTACTTCT+CGG | 0.290746 | 1_3:+57336027 | Msa0127740:CDS |
| ATATTGAATTGGCTGTTAAA+TGG | 0.303433 | 1_3:+57336343 | Msa0127740:CDS |
| CTTATAGATGTGTTCCTACT+TGG | 0.325100 | 1_3:+57336295 | Msa0127740:CDS |
| GCAATCTGTAACCAGATAAT+AGG | 0.326793 | 1_3:-57338394 | None:intergenic |
| TAGTCAATGAATCACTTCTT+TGG | 0.328386 | 1_3:-57338240 | None:intergenic |
| TTACTGCCATATAACTTTGC+AGG | 0.331845 | 1_3:-57338669 | None:intergenic |
| TTAAATGGGCGCTTCGTAAG+AGG | 0.341862 | 1_3:+57336358 | Msa0127740:CDS |
| TTAATCTAGAACCTATTATC+TGG | 0.346208 | 1_3:+57338383 | Msa0127740:three_prime_UTR |
| ATGAATCACTTCTTTGGCTT+CGG | 0.351012 | 1_3:-57338234 | None:intergenic |
| TGTCTGGAAAACCATCAAAC+TGG | 0.367415 | 1_3:-57338285 | None:intergenic |
| GAGATGCCTGCAAAGTTATA+TGG | 0.378395 | 1_3:+57338663 | Msa0127740:three_prime_UTR |
| CCATCATGAACCTTACTATA+AGG | 0.393189 | 1_3:-57336159 | None:intergenic |
| TGGTGGTTGGCCTTCTTCGC+CGG | 0.404259 | 1_3:+57336191 | Msa0127740:CDS |
| GTATGCGAAGATTAGTAATA+GGG | 0.406202 | 1_3:-57335914 | None:intergenic |
| TCAACCTGGTGATATTGAAT+TGG | 0.421228 | 1_3:+57336332 | Msa0127740:CDS |
| AAGATAATGAGTGAAACAAT+TGG | 0.423033 | 1_3:-57336072 | None:intergenic |
| CTAAACTCCTTCTCCAATCA+TGG | 0.427158 | 1_3:+57335852 | Msa0127740:exon |
| CAAGTAGGAACACATCTATA+AGG | 0.427274 | 1_3:-57336294 | None:intergenic |
| CATGATTGGAGAAGGAGTTT+AGG | 0.441984 | 1_3:-57335851 | None:intergenic |
| CACTAGGTGTCACAGATGAT+TGG | 0.449809 | 1_3:+57338109 | Msa0127740:CDS |
| ATGCTCATATTATGAAAAGT+TGG | 0.462906 | 1_3:+57338484 | Msa0127740:three_prime_UTR |
| AAGAACCTGAAATCGAGATC+GGG | 0.463765 | 1_3:-57335779 | None:intergenic |
| TATTGAATTGGCTGTTAAAT+GGG | 0.466528 | 1_3:+57336344 | Msa0127740:CDS |
| GATATGCCTACACCCATGAT+TGG | 0.469391 | 1_3:-57335865 | None:intergenic |
| TCAATAATAGCAGGATCACC+CGG | 0.471488 | 1_3:-57336225 | None:intergenic |
| ATGAGACTAAGGATGAATAG+AGG | 0.490069 | 1_3:-57335975 | None:intergenic |
| CGGTGAACCACCTTATAGTA+AGG | 0.492096 | 1_3:+57336149 | Msa0127740:CDS |
| TAACTTGCAATCATTATCCA+TGG | 0.494656 | 1_3:-57338540 | None:intergenic |
| TTATAGATGTGTTCCTACTT+GGG | 0.497653 | 1_3:+57336296 | Msa0127740:CDS |
| GAGAGCATTCATGCGAATGT+AGG | 0.504524 | 1_3:-57338166 | None:intergenic |
| AGATAATGAGTGAAACAATT+GGG | 0.508906 | 1_3:-57336071 | None:intergenic |
| ATCGCAAGGCACTTGAAGAA+TGG | 0.514773 | 1_3:+57338190 | Msa0127740:CDS |
| TGGATAGAATTAAGAAGCCT+AGG | 0.521479 | 1_3:-57335945 | None:intergenic |
| TGAGACGAGGAATGAGACTA+AGG | 0.528904 | 1_3:-57335986 | None:intergenic |
| AGTAAGGGAAGATCGATGGA+AGG | 0.531826 | 1_3:-57336021 | None:intergenic |
| TTCGCCGGAAAAGATGCCCC+CGG | 0.532390 | 1_3:+57336206 | Msa0127740:CDS |
| CAAGTACAATCAATAATAGC+AGG | 0.535238 | 1_3:-57336234 | None:intergenic |
| GAAGAACCTGAAATCGAGAT+CGG | 0.538546 | 1_3:-57335780 | None:intergenic |
| ATTCTTCAAGTGCCTTGCGA+TGG | 0.543540 | 1_3:-57338188 | None:intergenic |
| ATTCGAACGAAGTAAAGATA+AGG | 0.546264 | 1_3:-57336099 | None:intergenic |
| AGAGCATTCATGCGAATGTA+GGG | 0.548827 | 1_3:-57338165 | None:intergenic |
| CATGATGGACTTTACGTTGG+TGG | 0.548990 | 1_3:+57336174 | Msa0127740:CDS |
| GGATGAATAGAGGAATGGAA+TGG | 0.558145 | 1_3:-57335965 | None:intergenic |
| GTAAGGGAAGATCGATGGAA+GGG | 0.569098 | 1_3:-57336020 | None:intergenic |
| TAAATGGGCGCTTCGTAAGA+GGG | 0.572086 | 1_3:+57336359 | Msa0127740:CDS |
| CCTTATAGTAAGGTTCATGA+TGG | 0.572606 | 1_3:+57336159 | Msa0127740:CDS |
| GTCTGGAAAACCATCAAACT+GGG | 0.576734 | 1_3:-57338284 | None:intergenic |
| AATTGGGAATGTTCCGTCGG+AGG | 0.578873 | 1_3:-57336055 | None:intergenic |
| CAATAATAGCAGGATCACCC+GGG | 0.581474 | 1_3:-57336224 | None:intergenic |
| TAAACTCCTTCTCCAATCAT+GGG | 0.581818 | 1_3:+57335853 | Msa0127740:exon |
| CCGAGGTTGAAAAGTTTGAG+TGG | 0.583549 | 1_3:+57336264 | Msa0127740:CDS |
| ATGGACTTTACGTTGGTGGT+TGG | 0.584648 | 1_3:+57336178 | Msa0127740:CDS |
| CCTTCTCCAATCATGGGTGT+AGG | 0.585770 | 1_3:+57335859 | Msa0127740:exon |
| ACTAAGGATGAATAGAGGAA+TGG | 0.589227 | 1_3:-57335970 | None:intergenic |
| AATTCAATATCACCAGGTTG+AGG | 0.590249 | 1_3:-57336330 | None:intergenic |
| GAGAAGTAAGGGAAGATCGA+TGG | 0.593587 | 1_3:-57336025 | None:intergenic |
| CCTACACCCATGATTGGAGA+AGG | 0.593774 | 1_3:-57335859 | None:intergenic |
| ATTGTACTTGTGAGTTTCCG+AGG | 0.596378 | 1_3:+57336247 | Msa0127740:CDS |
| ACAGCCAATTCAATATCACC+AGG | 0.601105 | 1_3:-57336336 | None:intergenic |
| CATGAATGCTCTCCATCGCA+AGG | 0.603132 | 1_3:+57338176 | Msa0127740:CDS |
| AACTTGCAATCATTATCCAT+GGG | 0.603454 | 1_3:-57338539 | None:intergenic |
| ATTGCATAGTGTAATGCCCA+TGG | 0.603994 | 1_3:+57338523 | Msa0127740:three_prime_UTR |
| CAAGAATGCTAATAAAGTAG+AGG | 0.605988 | 1_3:-57338352 | None:intergenic |
| AGGTTGAAAAGTTTGAGTGG+TGG | 0.609401 | 1_3:+57336267 | Msa0127740:CDS |
| AACAATTGGGAATGTTCCGT+CGG | 0.616528 | 1_3:-57336058 | None:intergenic |
| TGAGATTGTTTATGACACAA+TGG | 0.622404 | 1_3:+57338639 | Msa0127740:three_prime_UTR |
| ATGGGCATTACACTATGCAA+TGG | 0.636503 | 1_3:-57338521 | None:intergenic |
| GTTCATGATGGACTTTACGT+TGG | 0.636648 | 1_3:+57336171 | Msa0127740:CDS |
| GGAGATCTAGTATCCCAAGT+AGG | 0.645762 | 1_3:-57336309 | None:intergenic |
| AGAACCTGAAATCGAGATCG+GGG | 0.646478 | 1_3:-57335778 | None:intergenic |
| TCATGAACCTTACTATAAGG+TGG | 0.649373 | 1_3:-57336156 | None:intergenic |
| GCTAATAAAGTAGAGGCACA+AGG | 0.650620 | 1_3:-57338345 | None:intergenic |
| TAAACTGCAACATCAACCGT+AGG | 0.656391 | 1_3:-57335811 | None:intergenic |
| GATACTAGATCTCCTCAACC+TGG | 0.658121 | 1_3:+57336318 | Msa0127740:CDS |
| CTATGCAATGGTCTCAACTG+TGG | 0.658232 | 1_3:-57338509 | None:intergenic |
| GGAGTTGTATGTAATTGTTG+TGG | 0.658660 | 1_3:+57338760 | Msa0127740:three_prime_UTR |
| CTTCTCGGCAAAACCTCCGA+CGG | 0.659592 | 1_3:+57336042 | Msa0127740:CDS |
| TGTGCACTGTTAGTTGCACT+AGG | 0.661928 | 1_3:+57338093 | Msa0127740:CDS |
| TCGTCGTACATAACTGCGTG+CGG | 0.670674 | 1_3:+57335721 | None:intergenic |
| GGTGTGATGCGATTGAGACG+AGG | 0.672751 | 1_3:-57335999 | None:intergenic |
| AATAATAGCAGGATCACCCG+GGG | 0.690073 | 1_3:-57336223 | None:intergenic |
| ATAATAGCAGGATCACCCGG+GGG | 0.807868 | 1_3:-57336222 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATTGATTATTTTTACTC+CGG | - | chr1_3:57336762-57336781 | None:intergenic | 15.0% |
| !! | ATAAATGAAAATGAGTAAAA+AGG | - | chr1_3:57337683-57337702 | None:intergenic | 15.0% |
| !!! | AATAGTCTTTGTTTGTTATT+TGG | - | chr1_3:57335757-57335776 | None:intergenic | 20.0% |
| !! | TACTACAATATTTCATTTCA+TGG | - | chr1_3:57336458-57336477 | None:intergenic | 20.0% |
| !!! | ATTTCATTTTATGAGAGTAA+TGG | + | chr1_3:57337086-57337105 | Msa0127740:intron | 20.0% |
| !!! | TTTTCTATGTTGTTTGATAA+AGG | + | chr1_3:57337177-57337196 | Msa0127740:intron | 20.0% |
| !!! | TTTCTATGTTGTTTGATAAA+GGG | + | chr1_3:57337178-57337197 | Msa0127740:intron | 20.0% |
| !!! | TATTACAATTTTGCTAGTTT+TGG | + | chr1_3:57337371-57337390 | Msa0127740:intron | 20.0% |
| !! | AAAACAAAACAAAATGATGT+TGG | - | chr1_3:57338030-57338049 | None:intergenic | 20.0% |
| !! | TATATGGCAGTAAATTTAAT+TGG | + | chr1_3:57338679-57338698 | Msa0127740:three_prime_UTR | 20.0% |
| !! | ATCTTAGTTGAAAAATGAAT+TGG | + | chr1_3:57338739-57338758 | Msa0127740:three_prime_UTR | 20.0% |
| ! | AGATAATGAGTGAAACAATT+GGG | - | chr1_3:57336074-57336093 | None:intergenic | 25.0% |
| ! | AAGATAATGAGTGAAACAAT+TGG | - | chr1_3:57336075-57336094 | None:intergenic | 25.0% |
| ! | ATATTGAATTGGCTGTTAAA+TGG | + | chr1_3:57336343-57336362 | Msa0127740:CDS | 25.0% |
| ! | TATTGAATTGGCTGTTAAAT+GGG | + | chr1_3:57336344-57336363 | Msa0127740:CDS | 25.0% |
| ! | TAAGCACAATGAACAAAAAT+GGG | - | chr1_3:57336396-57336415 | None:intergenic | 25.0% |
| ! | ATAAGCACAATGAACAAAAA+TGG | - | chr1_3:57336397-57336416 | None:intergenic | 25.0% |
| !! | ATTTTTGTTCATTGTGCTTA+TGG | + | chr1_3:57336396-57336415 | Msa0127740:CDS | 25.0% |
| !! | GTTCAAAACAACTTTAGAAA+AGG | - | chr1_3:57336856-57336875 | None:intergenic | 25.0% |
| !!! | CTTTGGATTAGTGTATATAT+TGG | - | chr1_3:57336953-57336972 | None:intergenic | 25.0% |
| ! | AACAACATAGAAAACTGTAA+GGG | - | chr1_3:57337171-57337190 | None:intergenic | 25.0% |
| ! | AAACAACATAGAAAACTGTA+AGG | - | chr1_3:57337172-57337191 | None:intergenic | 25.0% |
| ! | AGTAAAATTCTTTCTTCCAA+TGG | - | chr1_3:57337352-57337371 | None:intergenic | 25.0% |
| !! | ACTTTTGTGTTCATTATCTT+CGG | + | chr1_3:57337445-57337464 | Msa0127740:intron | 25.0% |
| ! | TGTATGATATGAATAGACTA+GGG | - | chr1_3:57337707-57337726 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | - | chr1_3:57337734-57337753 | None:intergenic | 25.0% |
| ! | TTGTATGTTTAATTCATCTC+TGG | - | chr1_3:57337798-57337817 | None:intergenic | 25.0% |
| ! | AGTGATACTATTATATTCCT+AGG | + | chr1_3:57337821-57337840 | Msa0127740:intron | 25.0% |
| ! | TAATATAGTGAAACTCTCAT+TGG | + | chr1_3:57337901-57337920 | Msa0127740:intron | 25.0% |
| !! | TGTAACTTGTAAGTTAAATG+TGG | - | chr1_3:57337937-57337956 | None:intergenic | 25.0% |
| ! | TGGTTATATCACATTCTTAT+AGG | - | chr1_3:57338010-57338029 | None:intergenic | 25.0% |
| ! | AAAAGCTGATAAAGCAAAAA+CGG | + | chr1_3:57338142-57338161 | Msa0127740:CDS | 25.0% |
| !! | TTAATCTAGAACCTATTATC+TGG | + | chr1_3:57338383-57338402 | Msa0127740:three_prime_UTR | 25.0% |
| ! | ATGCTCATATTATGAAAAGT+TGG | + | chr1_3:57338484-57338503 | Msa0127740:three_prime_UTR | 25.0% |
| !!! | CATTTTTCAACTAAGATCTT+TGG | - | chr1_3:57338736-57338755 | None:intergenic | 25.0% |
| !!! | ATTCTGAAGTTTTGATGTAA+TGG | + | chr1_3:57338785-57338804 | Msa0127740:three_prime_UTR | 25.0% |
| GTATGCGAAGATTAGTAATA+GGG | - | chr1_3:57335917-57335936 | None:intergenic | 30.0% | |
| !!! | TTAAGAAGCCTAGGTTTTTT+AGG | - | chr1_3:57335939-57335958 | None:intergenic | 30.0% |
| ATTCGAACGAAGTAAAGATA+AGG | - | chr1_3:57336102-57336121 | None:intergenic | 30.0% | |
| CAAGTACAATCAATAATAGC+AGG | - | chr1_3:57336237-57336256 | None:intergenic | 30.0% | |
| TTATAGATGTGTTCCTACTT+GGG | + | chr1_3:57336296-57336315 | Msa0127740:CDS | 30.0% | |
| TTGTTAGTATGAATGGAACT+AGG | + | chr1_3:57336578-57336597 | Msa0127740:intron | 30.0% | |
| TGTTAACCAAAAGAAACCTA+GGG | - | chr1_3:57336729-57336748 | None:intergenic | 30.0% | |
| ATGTTAACCAAAAGAAACCT+AGG | - | chr1_3:57336730-57336749 | None:intergenic | 30.0% | |
| !! | TATTTTTACTCCGGTGTATA+TGG | - | chr1_3:57336753-57336772 | None:intergenic | 30.0% |
| ! | TGTAGGTTGAAAATGTTACA+AGG | - | chr1_3:57336787-57336806 | None:intergenic | 30.0% |
| CCATGCTATCATATAATTGT+AGG | - | chr1_3:57336804-57336823 | None:intergenic | 30.0% | |
| CCTACAATTATATGATAGCA+TGG | + | chr1_3:57336801-57336820 | Msa0127740:intron | 30.0% | |
| !! | CTTTAGAAAAGGCATTTGTT+TGG | - | chr1_3:57336845-57336864 | None:intergenic | 30.0% |
| TTCTAAATTTGTGCTTGTCA+AGG | + | chr1_3:57336877-57336896 | Msa0127740:intron | 30.0% | |
| CCAATTTAGATAGGAGAATT+TGG | - | chr1_3:57336977-57336996 | None:intergenic | 30.0% | |
| CCAAATTCTCCTATCTAAAT+TGG | + | chr1_3:57336974-57336993 | Msa0127740:intron | 30.0% | |
| GTCTCAATTCCAATTTAGAT+AGG | - | chr1_3:57336986-57337005 | None:intergenic | 30.0% | |
| CTTTCACATAAATCAGAATG+TGG | - | chr1_3:57337049-57337068 | None:intergenic | 30.0% | |
| ACAACATAGAAAACTGTAAG+GGG | - | chr1_3:57337170-57337189 | None:intergenic | 30.0% | |
| TAAACACTTAAGACATGTGA+GGG | - | chr1_3:57337277-57337296 | None:intergenic | 30.0% | |
| !! | ATTATCTGTTGTTTCCTTGA+AGG | - | chr1_3:57337321-57337340 | None:intergenic | 30.0% |
| CAGATAATTGAGATAACCAT+TGG | + | chr1_3:57337333-57337352 | Msa0127740:intron | 30.0% | |
| ! | ATCAACAACACTGTTTGTTT+TGG | + | chr1_3:57337412-57337431 | Msa0127740:intron | 30.0% |
| ! | ATTGCATGTGTGTTATTCTA+AGG | - | chr1_3:57337582-57337601 | None:intergenic | 30.0% |
| ACACATGCAATGAAAAAACT+GGG | + | chr1_3:57337591-57337610 | Msa0127740:intron | 30.0% | |
| AAAAGCCCATATTGTCAATT+AGG | + | chr1_3:57337629-57337648 | Msa0127740:intron | 30.0% | |
| TCCTACCTAATTGACAATAT+GGG | - | chr1_3:57337637-57337656 | None:intergenic | 30.0% | |
| ATCCTACCTAATTGACAATA+TGG | - | chr1_3:57337638-57337657 | None:intergenic | 30.0% | |
| GTGTATGATATGAATAGACT+AGG | - | chr1_3:57337708-57337727 | None:intergenic | 30.0% | |
| TAAGTTAAATGTGGAGACAT+TGG | - | chr1_3:57337928-57337947 | None:intergenic | 30.0% | |
| TAGTCAATGAATCACTTCTT+TGG | - | chr1_3:57338243-57338262 | None:intergenic | 30.0% | |
| ! | GTTTTCCAGACAATACTTAA+TGG | + | chr1_3:57338296-57338315 | Msa0127740:three_prime_UTR | 30.0% |
| !! | TTTTGCCATTAAGTATTGTC+TGG | - | chr1_3:57338304-57338323 | None:intergenic | 30.0% |
| CAAGAATGCTAATAAAGTAG+AGG | - | chr1_3:57338355-57338374 | None:intergenic | 30.0% | |
| GATGTGTTGAAGTTGAAAAA+TGG | + | chr1_3:57338460-57338479 | Msa0127740:three_prime_UTR | 30.0% | |
| AACTTGCAATCATTATCCAT+GGG | - | chr1_3:57338542-57338561 | None:intergenic | 30.0% | |
| ! | TAACTTGCAATCATTATCCA+TGG | - | chr1_3:57338543-57338562 | None:intergenic | 30.0% |
| ! | CTCAAGTTTTTCTTTGCATA+AGG | + | chr1_3:57338598-57338617 | Msa0127740:three_prime_UTR | 30.0% |
| TGAGATTGTTTATGACACAA+TGG | + | chr1_3:57338639-57338658 | Msa0127740:three_prime_UTR | 30.0% | |
| TAAACTCCTTCTCCAATCAT+GGG | + | chr1_3:57335853-57335872 | Msa0127740:exon | 35.0% | |
| GGTATGCGAAGATTAGTAAT+AGG | - | chr1_3:57335918-57335937 | None:intergenic | 35.0% | |
| TTCGCATACCTAAAAAACCT+AGG | + | chr1_3:57335928-57335947 | Msa0127740:CDS | 35.0% | |
| TGGATAGAATTAAGAAGCCT+AGG | - | chr1_3:57335948-57335967 | None:intergenic | 35.0% | |
| ACTAAGGATGAATAGAGGAA+TGG | - | chr1_3:57335973-57335992 | None:intergenic | 35.0% | |
| ATGAGACTAAGGATGAATAG+AGG | - | chr1_3:57335978-57335997 | None:intergenic | 35.0% | |
| TCATGAACCTTACTATAAGG+TGG | - | chr1_3:57336159-57336178 | None:intergenic | 35.0% | |
| CCATCATGAACCTTACTATA+AGG | - | chr1_3:57336162-57336181 | None:intergenic | 35.0% | |
| CCTTATAGTAAGGTTCATGA+TGG | + | chr1_3:57336159-57336178 | Msa0127740:CDS | 35.0% | |
| CAAGTAGGAACACATCTATA+AGG | - | chr1_3:57336297-57336316 | None:intergenic | 35.0% | |
| CTTATAGATGTGTTCCTACT+TGG | + | chr1_3:57336295-57336314 | Msa0127740:CDS | 35.0% | |
| AATTCAATATCACCAGGTTG+AGG | - | chr1_3:57336333-57336352 | None:intergenic | 35.0% | |
| TCAACCTGGTGATATTGAAT+TGG | + | chr1_3:57336332-57336351 | Msa0127740:CDS | 35.0% | |
| ! | GTGGTTGTTGTTAGTATGAA+TGG | + | chr1_3:57336571-57336590 | Msa0127740:intron | 35.0% |
| ! | CTGTTGTTTGTAAACTCTGA+AGG | - | chr1_3:57336605-57336624 | None:intergenic | 35.0% |
| ! | CCACTAGTTTATTACCATCA+AGG | - | chr1_3:57336662-57336681 | None:intergenic | 35.0% |
| ! | CCTTGATGGTAATAAACTAG+TGG | + | chr1_3:57336659-57336678 | Msa0127740:intron | 35.0% |
| !!! | AGTGGTTATGTTAGTTTTCC+AGG | + | chr1_3:57336677-57336696 | Msa0127740:intron | 35.0% |
| !!! | AGGGAGTTTTAAGAAGTTCA+AGG | - | chr1_3:57336710-57336729 | None:intergenic | 35.0% |
| TGAACTTCTTAAAACTCCCT+AGG | + | chr1_3:57336710-57336729 | Msa0127740:intron | 35.0% | |
| ! | AAAACTCCCTAGGTTTCTTT+TGG | + | chr1_3:57336720-57336739 | Msa0127740:intron | 35.0% |
| TGGTTAACATCCATATACAC+CGG | + | chr1_3:57336740-57336759 | Msa0127740:intron | 35.0% | |
| TGCTTGTCAAGGAAAAACTT+TGG | + | chr1_3:57336888-57336907 | Msa0127740:intron | 35.0% | |
| AGATAGGAGAATTTGGACTT+TGG | - | chr1_3:57336970-57336989 | None:intergenic | 35.0% | |
| TCTAAATTGGAATTGAGACG+AGG | + | chr1_3:57336987-57337006 | Msa0127740:intron | 35.0% | |
| AGAATGTGGTCACAAACTAA+TGG | - | chr1_3:57337035-57337054 | None:intergenic | 35.0% | |
| ! | ATGTTGTTTGATAAAGGGAG+CGG | + | chr1_3:57337183-57337202 | Msa0127740:intron | 35.0% |
| ! | GGTTCTTTTCTCTCTTTAGT+TGG | - | chr1_3:57337256-57337275 | None:intergenic | 35.0% |
| CTAAACACTTAAGACATGTG+AGG | - | chr1_3:57337278-57337297 | None:intergenic | 35.0% | |
| TTGATGCCAATAGTGTACAA+CGG | - | chr1_3:57337397-57337416 | None:intergenic | 35.0% | |
| CACACATGCAATGAAAAAAC+TGG | + | chr1_3:57337590-57337609 | Msa0127740:intron | 35.0% | |
| TATTCATATCATACACCCTC+CGG | + | chr1_3:57337712-57337731 | Msa0127740:intron | 35.0% | |
| TATAGGCAAGCATAATAGTC+TGG | - | chr1_3:57337993-57338012 | None:intergenic | 35.0% | |
| ! | GTTTTCCCTTTCTTGTGTAA+AGG | + | chr1_3:57338045-57338064 | Msa0127740:intron | 35.0% |
| CATGACCTTTACACAAGAAA+GGG | - | chr1_3:57338053-57338072 | None:intergenic | 35.0% | |
| ! | ATGAATCACTTCTTTGGCTT+CGG | - | chr1_3:57338237-57338256 | None:intergenic | 35.0% |
| ! | TTTTGTCAATCCCAGTTTGA+TGG | + | chr1_3:57338274-57338293 | Msa0127740:three_prime_UTR | 35.0% |
| GCAATCTGTAACCAGATAAT+AGG | - | chr1_3:57338397-57338416 | None:intergenic | 35.0% | |
| TGCAAAGAAAAACTTGAGCT+TGG | - | chr1_3:57338596-57338615 | None:intergenic | 35.0% | |
| TTACTGCCATATAACTTTGC+AGG | - | chr1_3:57338672-57338691 | None:intergenic | 35.0% | |
| GGAGTTGTATGTAATTGTTG+TGG | + | chr1_3:57338760-57338779 | Msa0127740:three_prime_UTR | 35.0% | |
| !! | GTTTTGATGTAATGGTGTGA+TGG | + | chr1_3:57338793-57338812 | Msa0127740:three_prime_UTR | 35.0% |
| AAGAACCTGAAATCGAGATC+GGG | - | chr1_3:57335782-57335801 | None:intergenic | 40.0% | |
| GAAGAACCTGAAATCGAGAT+CGG | - | chr1_3:57335783-57335802 | None:intergenic | 40.0% | |
| GGTTCTTCTTCTTCTTCCTA+CGG | + | chr1_3:57335795-57335814 | Msa0127740:five_prime_UTR | 40.0% | |
| TAAACTGCAACATCAACCGT+AGG | - | chr1_3:57335814-57335833 | None:intergenic | 40.0% | |
| CATGATTGGAGAAGGAGTTT+AGG | - | chr1_3:57335854-57335873 | None:intergenic | 40.0% | |
| CTAAACTCCTTCTCCAATCA+TGG | + | chr1_3:57335852-57335871 | Msa0127740:exon | 40.0% | |
| GGATGAATAGAGGAATGGAA+TGG | - | chr1_3:57335968-57335987 | None:intergenic | 40.0% | |
| ATCGATCTTCCCTTACTTCT+CGG | + | chr1_3:57336027-57336046 | Msa0127740:CDS | 40.0% | |
| AACAATTGGGAATGTTCCGT+CGG | - | chr1_3:57336061-57336080 | None:intergenic | 40.0% | |
| !! | GTTCATGATGGACTTTACGT+TGG | + | chr1_3:57336171-57336190 | Msa0127740:CDS | 40.0% |
| TCAATAATAGCAGGATCACC+CGG | - | chr1_3:57336228-57336247 | None:intergenic | 40.0% | |
| ATTGTACTTGTGAGTTTCCG+AGG | + | chr1_3:57336247-57336266 | Msa0127740:CDS | 40.0% | |
| ! | CCACTCAAACTTTTCAACCT+CGG | - | chr1_3:57336267-57336286 | None:intergenic | 40.0% |
| AGGTTGAAAAGTTTGAGTGG+TGG | + | chr1_3:57336267-57336286 | Msa0127740:CDS | 40.0% | |
| ACAGCCAATTCAATATCACC+AGG | - | chr1_3:57336339-57336358 | None:intergenic | 40.0% | |
| GAAGTTCAAGGTTCAAATCC+TGG | - | chr1_3:57336698-57336717 | None:intergenic | 40.0% | |
| !! | GAAAAGGCATTTGTTTGGAC+AGG | - | chr1_3:57336840-57336859 | None:intergenic | 40.0% |
| TCTGCACGTGAGATAATAGA+AGG | + | chr1_3:57337144-57337163 | Msa0127740:intron | 40.0% | |
| ATAAAGGGAGCGGTGATAAA+GGG | + | chr1_3:57337193-57337212 | Msa0127740:intron | 40.0% | |
| GATAAAGGGAAATGTTGGAC+AGG | + | chr1_3:57337207-57337226 | Msa0127740:intron | 40.0% | |
| TTTGTACTGTGAGTCCTTCA+AGG | + | chr1_3:57337304-57337323 | Msa0127740:intron | 40.0% | |
| ! | TTTTGGCCGTTGTACACTAT+TGG | + | chr1_3:57337388-57337407 | Msa0127740:intron | 40.0% |
| TGCTAAACACCCAGTAAACA+GGG | - | chr1_3:57337494-57337513 | None:intergenic | 40.0% | |
| GCCCATATTGTCAATTAGGT+AGG | + | chr1_3:57337633-57337652 | Msa0127740:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | chr1_3:57337730-57337749 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr1_3:57337731-57337750 | None:intergenic | 40.0% | |
| CCATGACCTTTACACAAGAA+AGG | - | chr1_3:57338054-57338073 | None:intergenic | 40.0% | |
| CCTTTCTTGTGTAAAGGTCA+TGG | + | chr1_3:57338051-57338070 | Msa0127740:intron | 40.0% | |
| ! | AGAGCATTCATGCGAATGTA+GGG | - | chr1_3:57338168-57338187 | None:intergenic | 40.0% |
| GTCTGGAAAACCATCAAACT+GGG | - | chr1_3:57338287-57338306 | None:intergenic | 40.0% | |
| TGTCTGGAAAACCATCAAAC+TGG | - | chr1_3:57338288-57338307 | None:intergenic | 40.0% | |
| ! | GCTAATAAAGTAGAGGCACA+AGG | - | chr1_3:57338348-57338367 | None:intergenic | 40.0% |
| ATGGGCATTACACTATGCAA+TGG | - | chr1_3:57338524-57338543 | None:intergenic | 40.0% | |
| ATTGCATAGTGTAATGCCCA+TGG | + | chr1_3:57338523-57338542 | Msa0127740:three_prime_UTR | 40.0% | |
| GAGATGCCTGCAAAGTTATA+TGG | + | chr1_3:57338663-57338682 | Msa0127740:three_prime_UTR | 40.0% | |
| ATTTCCCCGATCTCGATTTC+AGG | + | chr1_3:57335774-57335793 | Msa0127740:five_prime_UTR | 45.0% | |
| AGAACCTGAAATCGAGATCG+GGG | - | chr1_3:57335781-57335800 | None:intergenic | 45.0% | |
| GATATGCCTACACCCATGAT+TGG | - | chr1_3:57335868-57335887 | None:intergenic | 45.0% | |
| TGAGACGAGGAATGAGACTA+AGG | - | chr1_3:57335989-57336008 | None:intergenic | 45.0% | |
| GTAAGGGAAGATCGATGGAA+GGG | - | chr1_3:57336023-57336042 | None:intergenic | 45.0% | |
| AGTAAGGGAAGATCGATGGA+AGG | - | chr1_3:57336024-57336043 | None:intergenic | 45.0% | |
| GAGAAGTAAGGGAAGATCGA+TGG | - | chr1_3:57336028-57336047 | None:intergenic | 45.0% | |
| ! | GAGGTTTTGCCGAGAAGTAA+GGG | - | chr1_3:57336039-57336058 | None:intergenic | 45.0% |
| CGGTGAACCACCTTATAGTA+AGG | + | chr1_3:57336149-57336168 | Msa0127740:CDS | 45.0% | |
| !! | CATGATGGACTTTACGTTGG+TGG | + | chr1_3:57336174-57336193 | Msa0127740:CDS | 45.0% |
| !! | ATGGACTTTACGTTGGTGGT+TGG | + | chr1_3:57336178-57336197 | Msa0127740:CDS | 45.0% |
| AATAATAGCAGGATCACCCG+GGG | - | chr1_3:57336226-57336245 | None:intergenic | 45.0% | |
| CAATAATAGCAGGATCACCC+GGG | - | chr1_3:57336227-57336246 | None:intergenic | 45.0% | |
| CCGAGGTTGAAAAGTTTGAG+TGG | + | chr1_3:57336264-57336283 | Msa0127740:CDS | 45.0% | |
| GGAGATCTAGTATCCCAAGT+AGG | - | chr1_3:57336312-57336331 | None:intergenic | 45.0% | |
| GATACTAGATCTCCTCAACC+TGG | + | chr1_3:57336318-57336337 | Msa0127740:CDS | 45.0% | |
| TTAAATGGGCGCTTCGTAAG+AGG | + | chr1_3:57336358-57336377 | Msa0127740:CDS | 45.0% | |
| TAAATGGGCGCTTCGTAAGA+GGG | + | chr1_3:57336359-57336378 | Msa0127740:CDS | 45.0% | |
| TGACCCCACTTAGTGGAATA+AGG | + | chr1_3:57336544-57336563 | Msa0127740:intron | 45.0% | |
| !! | GAGCCTTATTCCACTAAGTG+GGG | - | chr1_3:57336550-57336569 | None:intergenic | 45.0% |
| !! | CGAGCCTTATTCCACTAAGT+GGG | - | chr1_3:57336551-57336570 | None:intergenic | 45.0% |
| CCACTTAGTGGAATAAGGCT+CGG | + | chr1_3:57336549-57336568 | Msa0127740:intron | 45.0% | |
| TGCACACCAATGACTTATGC+TGG | + | chr1_3:57336635-57336654 | Msa0127740:intron | 45.0% | |
| CAAGGTCCAGCATAAGTCAT+TGG | - | chr1_3:57336644-57336663 | None:intergenic | 45.0% | |
| TGACTTATGCTGGACCTTGA+TGG | + | chr1_3:57336645-57336664 | Msa0127740:intron | 45.0% | |
| GATAAAGGGAGCGGTGATAA+AGG | + | chr1_3:57337192-57337211 | Msa0127740:intron | 45.0% | |
| GCGGTGATAAAGGGAAATGT+TGG | + | chr1_3:57337202-57337221 | Msa0127740:intron | 45.0% | |
| GTGCTAAACACCCAGTAAAC+AGG | - | chr1_3:57337495-57337514 | None:intergenic | 45.0% | |
| ATATTCCTAGGTCCCTGCAT+AGG | + | chr1_3:57337833-57337852 | Msa0127740:intron | 45.0% | |
| TGTGCACTGTTAGTTGCACT+AGG | + | chr1_3:57338093-57338112 | Msa0127740:CDS | 45.0% | |
| ! | CACTAGGTGTCACAGATGAT+TGG | + | chr1_3:57338109-57338128 | Msa0127740:CDS | 45.0% |
| !! | GAGAGCATTCATGCGAATGT+AGG | - | chr1_3:57338169-57338188 | None:intergenic | 45.0% |
| ATTCTTCAAGTGCCTTGCGA+TGG | - | chr1_3:57338191-57338210 | None:intergenic | 45.0% | |
| ! | ATCGCAAGGCACTTGAAGAA+TGG | + | chr1_3:57338190-57338209 | Msa0127740:CDS | 45.0% |
| CTATGCAATGGTCTCAACTG+TGG | - | chr1_3:57338512-57338531 | None:intergenic | 45.0% | |
| CCTACACCCATGATTGGAGA+AGG | - | chr1_3:57335862-57335881 | None:intergenic | 50.0% | |
| CCTTCTCCAATCATGGGTGT+AGG | + | chr1_3:57335859-57335878 | Msa0127740:exon | 50.0% | |
| ! | GGAGGTTTTGCCGAGAAGTA+AGG | - | chr1_3:57336040-57336059 | None:intergenic | 50.0% |
| AATTGGGAATGTTCCGTCGG+AGG | - | chr1_3:57336058-57336077 | None:intergenic | 50.0% | |
| !!! | GCTTTTTCGTCTTCGAAGCG+CGG | - | chr1_3:57336130-57336149 | None:intergenic | 50.0% |
| GCGCTTCGAAGACGAAAAAG+CGG | + | chr1_3:57336129-57336148 | Msa0127740:CDS | 50.0% | |
| ATAATAGCAGGATCACCCGG+GGG | - | chr1_3:57336225-57336244 | None:intergenic | 50.0% | |
| ACTAAGTGGGGTCAGCTACA+TGG | - | chr1_3:57336538-57336557 | None:intergenic | 50.0% | |
| ATGTAGCTGACCCCACTTAG+TGG | + | chr1_3:57336537-57336556 | Msa0127740:intron | 50.0% | |
| !! | CCGAGCCTTATTCCACTAAG+TGG | - | chr1_3:57336552-57336571 | None:intergenic | 50.0% |
| CTTAGTGGAATAAGGCTCGG+TGG | + | chr1_3:57336552-57336571 | Msa0127740:intron | 50.0% | |
| AACTCCTCGCCCTGTTTACT+GGG | + | chr1_3:57337482-57337501 | Msa0127740:intron | 50.0% | |
| TCAGTGCACATGCCTATGCA+GGG | - | chr1_3:57337848-57337867 | None:intergenic | 50.0% | |
| ATCAGTGCACATGCCTATGC+AGG | - | chr1_3:57337849-57337868 | None:intergenic | 50.0% | |
| CATGAATGCTCTCCATCGCA+AGG | + | chr1_3:57338176-57338195 | Msa0127740:CDS | 50.0% | |
| GGTGTGATGCGATTGAGACG+AGG | - | chr1_3:57336002-57336021 | None:intergenic | 55.0% | |
| CTTCTCGGCAAAACCTCCGA+CGG | + | chr1_3:57336042-57336061 | Msa0127740:CDS | 55.0% | |
| ! | GGCATCTTTTCCGGCGAAGA+AGG | - | chr1_3:57336204-57336223 | None:intergenic | 55.0% |
| GAACTCCTCGCCCTGTTTAC+TGG | + | chr1_3:57337481-57337500 | Msa0127740:intron | 55.0% | |
| AACACCCAGTAAACAGGGCG+AGG | - | chr1_3:57337489-57337508 | None:intergenic | 55.0% | |
| ACATGCCTATGCAGGGACCT+AGG | - | chr1_3:57337841-57337860 | None:intergenic | 55.0% | |
| !! | TGGTGGTTGGCCTTCTTCGC+CGG | + | chr1_3:57336191-57336210 | Msa0127740:CDS | 60.0% |
| TTCGCCGGAAAAGATGCCCC+CGG | + | chr1_3:57336206-57336225 | Msa0127740:CDS | 60.0% | |
| !!! | TCACCCGGGGGCATCTTTTC+CGG | - | chr1_3:57336213-57336232 | None:intergenic | 60.0% |
| TCGCCGGAAAAGATGCCCCC+GGG | + | chr1_3:57336207-57336226 | Msa0127740:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 57335725 | 57338832 | 57335725 | ID=Msa0127740;Name=Msa0127740 |
| chr1_3 | mRNA | 57335725 | 57338832 | 57335725 | ID=Msa0127740-mRNA-1;Parent=Msa0127740;Name=Msa0127740-mRNA-1;_AED=0.01;_eAED=0.01;_QI=146|1|1|1|1|1|2|581|243 |
| chr1_3 | exon | 57335725 | 57336417 | 57335725 | ID=Msa0127740-mRNA-1:exon:18174;Parent=Msa0127740-mRNA-1 |
| chr1_3 | exon | 57338067 | 57338832 | 57338067 | ID=Msa0127740-mRNA-1:exon:18175;Parent=Msa0127740-mRNA-1 |
| chr1_3 | five_prime_UTR | 57335725 | 57335870 | 57335725 | ID=Msa0127740-mRNA-1:five_prime_utr;Parent=Msa0127740-mRNA-1 |
| chr1_3 | CDS | 57335871 | 57336417 | 57335871 | ID=Msa0127740-mRNA-1:cds;Parent=Msa0127740-mRNA-1 |
| chr1_3 | CDS | 57338067 | 57338251 | 57338067 | ID=Msa0127740-mRNA-1:cds;Parent=Msa0127740-mRNA-1 |
| chr1_3 | three_prime_UTR | 57338252 | 57338832 | 57338252 | ID=Msa0127740-mRNA-1:three_prime_utr;Parent=Msa0127740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
