AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0161040

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0161040 MtrunA17_Chr1g0197241 90.083 1563 109 6 1 1525 1 1555 0.0 2781
Msa0161040 MtrunA17_Chr1g0197201 58.226 1161 360 26 468 1520 222 1365 0.0 1222
Msa0161040 MtrunA17_Chr1g0197201 40.803 299 163 7 128 415 1 296 4.00e-47 186
Msa0161040 MtrunA17_Chr1g0197181 68.561 528 109 5 1054 1525 2 528 0.0 699
Msa0161040 MtrunA17_Chr1g0197191 64.371 334 107 6 693 1019 2 330 2.31e-134 418
Msa0161040 MtrunA17_Chr8g0344071 36.182 749 431 14 779 1502 418 1144 1.72e-111 382
Msa0161040 MtrunA17_Chr5g0404741 29.654 897 538 28 671 1505 21 886 8.30e-76 272
Msa0161040 MtrunA17_Chr1g0151481 27.685 903 549 24 681 1507 27 901 1.00e-72 263
Msa0161040 MtrunA17_Chr3g0101321 28.196 876 559 21 680 1505 26 881 6.97e-72 260
Msa0161040 MtrunA17_Chr5g0410021 28.045 895 539 32 680 1506 26 883 2.32e-70 256
Msa0161040 MtrunA17_Chr5g0409991 28.268 895 535 33 680 1506 26 881 1.68e-69 253
Msa0161040 MtrunA17_Chr2g0299001 28.634 908 527 29 680 1502 26 897 3.53e-69 252
Msa0161040 MtrunA17_Chr3g0081391 27.506 898 544 24 686 1506 32 899 5.90e-68 249
Msa0161040 MtrunA17_Chr3g0081371 28.429 904 538 28 680 1506 34 905 8.45e-68 248
Msa0161040 MtrunA17_Chr5g0409971 27.982 897 540 31 680 1506 26 886 2.50e-67 247
Msa0161040 MtrunA17_Chr5g0410001 27.353 903 537 31 680 1506 25 884 3.37e-67 246
Msa0161040 MtrunA17_Chr3g0080741 26.275 902 563 25 680 1505 26 901 1.02e-64 239
Msa0161040 MtrunA17_Chr3g0081361 27.063 909 544 26 680 1506 34 905 6.05e-64 237
Msa0161040 MtrunA17_Chr3g0081211 27.373 906 550 26 678 1506 24 898 9.01e-64 236
Msa0161040 MtrunA17_Chr3g0080771 27.506 898 554 23 680 1505 26 898 1.03e-63 236
Msa0161040 MtrunA17_Chr3g0101011 27.536 897 543 32 678 1495 32 900 1.89e-63 235
Msa0161040 MtrunA17_Chr3g0080601 28.256 906 544 29 673 1505 26 898 3.69e-63 234
Msa0161040 MtrunA17_Chr7g0219851 27.538 926 551 28 664 1503 20 911 6.05e-63 233
Msa0161040 MtrunA17_Chr3g0080751 27.442 911 578 28 661 1505 7 900 6.35e-63 233
Msa0161040 MtrunA17_Chr1g0189351 26.490 906 571 30 680 1512 26 909 1.87e-62 232
Msa0161040 MtrunA17_Chr3g0094301 27.434 904 548 28 680 1505 26 899 1.11e-61 229
Msa0161040 MtrunA17_Chr7g0229761 27.434 904 548 28 680 1505 26 899 1.11e-61 229
Msa0161040 MtrunA17_Chr3g0081341 27.578 863 527 26 713 1506 130 963 1.96e-61 229
Msa0161040 MtrunA17_Chr3g0081191 27.969 901 538 26 680 1503 26 892 3.18e-61 228
Msa0161040 MtrunA17_Chr3g0080791 27.160 891 562 26 680 1503 26 896 8.29e-60 224
Msa0161040 MtrunA17_Chr3g0112511 26.906 892 567 26 680 1516 26 887 3.13e-59 221
Msa0161040 MtrunA17_Chr3g0100961 25.905 884 570 27 680 1505 26 882 6.06e-59 221
Msa0161040 MtrunA17_Chr5g0410031 26.035 918 534 29 680 1506 26 889 1.10e-58 220
Msa0161040 MtrunA17_Chr3g0080731 27.027 888 539 28 694 1505 45 899 6.02e-58 218
Msa0161040 MtrunA17_Chr4g0037421 27.174 920 534 32 678 1494 61 947 7.83e-58 218
Msa0161040 MtrunA17_Chr3g0101331 25.442 904 570 28 680 1503 26 905 2.53e-57 216
Msa0161040 MtrunA17_Chr3g0100831 26.765 878 549 30 680 1494 26 872 7.06e-57 214
Msa0161040 MtrunA17_Chr3g0101241 26.411 886 564 28 673 1502 6 859 5.84e-55 208
Msa0161040 MtrunA17_Chr3g0101271 26.411 886 564 28 673 1502 6 859 7.11e-55 208
Msa0161040 MtrunA17_Chr3g0101181 27.647 850 520 33 716 1494 74 899 3.83e-53 203
Msa0161040 MtrunA17_Chr3g0101231 26.077 905 570 29 674 1506 28 905 1.09e-52 201
Msa0161040 MtrunA17_Chr3g0080721 28.257 637 405 17 902 1505 18 635 1.76e-52 197
Msa0161040 MtrunA17_Chr3g0100971 27.547 697 434 22 680 1318 26 709 1.94e-52 198
Msa0161040 MtrunA17_Chr3g0081181 25.221 904 561 25 676 1506 22 883 9.00e-52 199
Msa0161040 MtrunA17_Chr3g0086161 26.867 897 544 37 695 1525 45 895 1.40e-51 199
Msa0161040 MtrunA17_Chr3g0080631 25.771 908 513 30 680 1505 26 854 1.81e-51 197
Msa0161040 MtrunA17_Chr3g0100851 26.127 754 474 20 799 1510 56 768 4.25e-50 192
Msa0161040 MtrunA17_Chr3g0100761 27.379 683 413 22 680 1318 26 669 1.22e-49 189
Msa0161040 MtrunA17_Chr3g0086181 27.850 851 540 33 699 1501 48 872 1.12e-48 188
Msa0161040 MtrunA17_Chr3g0082791 26.993 878 543 35 699 1513 55 897 2.09e-48 189
Msa0161040 MtrunA17_Chr3g0101201 25.749 901 568 33 674 1506 30 897 1.92e-47 185
Msa0161040 MtrunA17_Chr3g0084031 27.030 862 536 32 715 1513 72 903 1.85e-46 183
Msa0161040 MtrunA17_Chr7g0248531 25.922 868 539 35 696 1495 50 881 1.90e-46 182
Msa0161040 MtrunA17_Chr3g0089251 27.365 888 507 41 695 1491 80 920 7.37e-46 181
Msa0161040 MtrunA17_Chr3g0100801 25.183 818 491 28 680 1446 23 770 1.19e-45 178
Msa0161040 MtrunA17_Chr3g0089651 27.560 918 523 46 671 1491 23 895 1.37e-45 180
Msa0161040 MtrunA17_Chr3g0089761 27.571 885 496 44 701 1491 57 890 3.03e-45 179
Msa0161040 MtrunA17_Chr3g0089211 27.262 884 512 41 695 1491 98 937 4.24e-45 179
Msa0161040 MtrunA17_Chr3g0090691 27.148 873 528 39 697 1494 53 892 1.04e-44 177
Msa0161040 MtrunA17_Chr3g0090651 26.166 879 529 38 698 1494 53 893 1.31e-44 176
Msa0161040 MtrunA17_Chr3g0091081 28.062 645 396 26 695 1292 51 674 1.50e-44 177
Msa0161040 MtrunA17_Chr3g0089541 28.341 681 404 29 671 1292 23 678 2.15e-44 176
Msa0161040 MtrunA17_Chr3g0092261 27.242 892 502 41 695 1491 96 935 2.27e-44 176
Msa0161040 MtrunA17_Chr3g0092241 26.888 874 529 40 695 1491 51 891 3.02e-44 176
Msa0161040 MtrunA17_Chr1g0169901 26.829 902 545 38 697 1521 52 915 6.57e-44 174
Msa0161040 MtrunA17_Chr3g0087581 27.018 892 543 38 699 1525 48 896 6.94e-44 174
Msa0161040 MtrunA17_Chr3g0084351 29.747 474 285 14 799 1236 93 554 7.17e-44 169
Msa0161040 MtrunA17_Chr3g0089991 27.409 934 541 44 671 1511 23 912 9.04e-44 174
Msa0161040 MtrunA17_Chr3g0101221 26.641 792 482 31 764 1491 129 885 2.32e-43 172
Msa0161040 MtrunA17_Chr8g0352831 25.371 875 545 32 695 1488 51 898 2.46e-43 173
Msa0161040 MtrunA17_Chr3g0086151 25.499 851 559 30 695 1495 45 870 2.76e-43 171
Msa0161040 MtrunA17_Chr3g0091061 26.171 875 531 37 697 1492 53 891 3.07e-43 173
Msa0161040 MtrunA17_Chr3g0089911 28.439 647 365 27 695 1278 51 662 3.68e-43 169
Msa0161040 MtrunA17_Chr3g0080651 26.845 637 399 18 900 1505 214 814 3.80e-43 171
Msa0161040 MtrunA17_Chr3g0089781 27.346 874 525 37 695 1491 51 891 4.10e-43 172
Msa0161040 MtrunA17_Chr3g0084051 27.566 867 520 35 715 1513 70 896 6.54e-43 171
Msa0161040 MtrunA17_Chr3g0086221 26.559 866 531 37 695 1494 45 871 2.65e-42 169
Msa0161040 MtrunA17_Chr3g0090141 25.455 880 535 37 694 1491 50 890 2.72e-42 170
Msa0161040 MtrunA17_Chr1g0189551 26.106 701 463 21 662 1323 40 724 2.91e-42 168
Msa0161040 MtrunA17_Chr3g0089421 26.038 891 517 41 695 1491 51 893 3.74e-42 169
Msa0161040 MtrunA17_Chr3g0085501 27.241 870 528 35 699 1494 52 890 4.62e-42 169
Msa0161040 MtrunA17_Chr3g0089601 28.609 769 442 38 795 1491 156 889 5.35e-42 167
Msa0161040 MtrunA17_Chr3g0082131 26.209 889 542 31 697 1504 51 906 7.24e-42 168
Msa0161040 MtrunA17_Chr3g0089501 27.889 649 378 25 718 1292 41 673 8.84e-42 167
Msa0161040 MtrunA17_Chr3g0100731 27.160 648 387 19 893 1494 24 632 9.99e-42 164
Msa0161040 MtrunA17_Chr3g0089811 28.615 657 378 26 695 1292 51 675 1.22e-41 167
Msa0161040 MtrunA17_Chr3g0089591 26.566 926 525 41 695 1495 51 946 1.65e-41 167
Msa0161040 MtrunA17_Chr4g0025391 27.178 861 522 39 695 1482 51 879 3.97e-41 166
Msa0161040 MtrunA17_Chr3g0089961 25.753 897 513 41 695 1491 51 894 6.11e-41 164
Msa0161040 MtrunA17_Chr3g0082391 27.547 697 422 23 695 1339 50 715 7.21e-41 163
Msa0161040 MtrunA17_Chr3g0087541 26.941 876 543 33 699 1504 52 900 8.21e-41 165
Msa0161040 MtrunA17_Chr1g0189271 30.769 325 206 7 799 1108 3 323 9.49e-41 154
Msa0161040 MtrunA17_Chr3g0089871 25.497 604 385 18 695 1262 51 625 1.16e-40 164
Msa0161040 MtrunA17_Chr6g0468451 25.499 902 545 31 653 1485 8 851 1.20e-40 164
Msa0161040 MtrunA17_Chr3g0084081 25.822 852 531 31 715 1501 70 885 2.04e-40 163
Msa0161040 MtrunA17_Chr3g0090431 28.491 530 335 18 795 1292 30 547 7.84e-40 161
Msa0161040 MtrunA17_Chr3g0085651 26.419 863 551 32 695 1500 45 880 1.02e-39 161
Msa0161040 MtrunA17_Chr3g0082871 26.567 670 429 28 671 1297 13 662 1.06e-39 159
Msa0161040 MtrunA17_Chr3g0101251 25.684 767 466 23 783 1506 154 859 1.42e-39 160
Msa0161040 MtrunA17_Chr3g0082891 26.584 726 478 29 671 1358 13 721 2.76e-39 159
Msa0161040 MtrunA17_Chr3g0082881 26.347 668 433 26 671 1297 13 662 5.14e-39 158
Msa0161040 MtrunA17_Chr3g0089471 26.183 909 520 39 695 1482 51 929 5.45e-39 159
Msa0161040 MtrunA17_Chr3g0100681 29.259 540 323 19 821 1318 1 523 5.52e-39 154
Msa0161040 MtrunA17_Chr3g0086621 25.688 872 533 36 699 1501 48 873 5.82e-39 159
Msa0161040 MtrunA17_Chr3g0087841 26.780 646 406 25 694 1292 50 675 6.36e-39 159
Msa0161040 MtrunA17_Chr8g0348931 27.259 686 418 29 671 1297 23 686 6.95e-39 159
Msa0161040 MtrunA17_Chr3g0090371 26.275 647 407 24 694 1292 50 674 8.53e-39 158
Msa0161040 MtrunA17_Chr3g0082101 25.475 895 519 34 697 1516 53 874 9.52e-39 157
Msa0161040 MtrunA17_Chr7g0248221 27.354 669 412 24 662 1278 12 658 1.12e-38 157
Msa0161040 MtrunA17_Chr3g0101391 28.192 603 361 21 946 1503 2 577 1.25e-38 154
Msa0161040 MtrunA17_Chr3g0087701 26.037 868 546 32 695 1501 45 877 2.37e-38 157
Msa0161040 MtrunA17_Chr1g0164611 25.518 917 543 35 697 1516 53 926 2.98e-38 156
Msa0161040 MtrunA17_Chr3g0090401 24.513 873 540 35 694 1495 261 1085 3.43e-38 157
Msa0161040 MtrunA17_Chr3g0113481 26.073 629 386 20 697 1278 51 647 3.90e-38 154
Msa0161040 MtrunA17_Chr3g0082351 26.012 865 526 35 695 1482 50 877 4.05e-38 156
Msa0161040 MtrunA17_Chr3g0085801 28.322 745 446 29 795 1500 163 858 4.21e-38 155
Msa0161040 MtrunA17_Chr5g0429961 25.254 887 530 33 673 1483 19 848 5.50e-38 155
Msa0161040 MtrunA17_Chr3g0082811 26.117 582 393 17 755 1313 112 679 8.59e-38 154
Msa0161040 MtrunA17_Chr2g0309721 26.994 652 392 26 695 1292 51 672 1.50e-37 154
Msa0161040 MtrunA17_Chr1g0164581 27.851 754 460 26 812 1504 152 882 1.94e-37 154
Msa0161040 MtrunA17_Chr3g0085561 26.879 692 403 19 692 1350 40 661 2.85e-37 153
Msa0161040 MtrunA17_Chr8g0352861 24.720 894 536 34 695 1494 51 901 3.19e-37 153
Msa0161040 MtrunA17_Chr3g0085331 26.788 881 523 31 699 1495 52 894 3.64e-37 153
Msa0161040 MtrunA17_Chr3g0113791 25.434 633 385 21 697 1278 51 647 4.94e-37 152
Msa0161040 MtrunA17_Chr4g0010201 28.644 590 349 28 765 1306 118 683 4.96e-37 152
Msa0161040 MtrunA17_Chr5g0414311 25.142 879 551 30 679 1485 25 868 7.35e-37 152
Msa0161040 MtrunA17_Chr4g0009781 26.545 825 489 41 765 1512 118 902 8.00e-37 151
Msa0161040 MtrunA17_Chr5g0430141 25.926 891 528 36 673 1483 19 857 9.42e-37 151
Msa0161040 MtrunA17_Chr3g0123111 25.573 872 550 31 679 1503 25 844 1.16e-36 151
Msa0161040 MtrunA17_Chr6g0468101 26.227 652 416 21 679 1313 25 628 3.19e-36 150
Msa0161040 MtrunA17_Chr3g0082311 26.418 670 395 22 695 1300 50 685 3.85e-36 149
Msa0161040 MtrunA17_Chr2g0282991 24.831 890 537 35 678 1482 31 873 6.77e-36 149
Msa0161040 MtrunA17_Chr4g0010261 26.728 651 386 28 765 1368 118 724 9.14e-36 148
Msa0161040 MtrunA17_Chr7g0257541 25.000 656 406 22 680 1270 32 666 1.09e-35 147
Msa0161040 MtrunA17_Chr6g0471941 25.216 694 429 22 661 1288 2 671 1.34e-35 147
Msa0161040 MtrunA17_Chr3g0084061 27.073 772 482 31 799 1516 155 899 1.53e-35 147
Msa0161040 MtrunA17_Chr3g0083621 26.650 803 457 35 794 1504 147 909 1.79e-35 147
Msa0161040 MtrunA17_Chr6g0468121 26.087 690 452 25 653 1313 8 668 1.84e-35 147
Msa0161040 MtrunA17_Chr8g0338621 25.873 630 411 17 655 1245 5 617 2.22e-35 145
Msa0161040 MtrunA17_Chr5g0430291 25.727 653 426 20 678 1292 24 655 2.47e-35 147
Msa0161040 MtrunA17_Chr1g0164391 25.385 910 526 39 695 1502 50 908 2.66e-35 147
Msa0161040 MtrunA17_Chr7g0221481 26.061 683 410 22 680 1301 33 681 2.82e-35 146
Msa0161040 MtrunA17_Chr5g0433771 26.244 663 418 23 662 1270 12 657 3.78e-35 145
Msa0161040 MtrunA17_Chr5g0415551 29.422 588 363 23 803 1363 28 590 7.98e-35 144
Msa0161040 MtrunA17_Chr3g0085451 26.156 757 484 25 795 1501 133 864 1.01e-34 145
Msa0161040 MtrunA17_Chr6g0467961 25.193 647 442 17 679 1300 25 654 1.11e-34 144
Msa0161040 MtrunA17_Chr4g0010221 27.116 579 371 25 765 1306 118 682 1.60e-34 144
Msa0161040 MtrunA17_Chr4g0010251 28.858 499 303 22 841 1306 200 679 1.62e-34 144
Msa0161040 MtrunA17_Chr7g0244231 24.781 912 554 36 675 1515 21 871 1.84e-34 144
Msa0161040 MtrunA17_Chr3g0086091 27.358 742 447 34 840 1525 2 707 1.88e-34 144
Msa0161040 MtrunA17_Chr3g0083721 26.607 887 509 42 681 1486 1 826 3.08e-34 143
Msa0161040 MtrunA17_Chr3g0085521 25.086 869 543 32 699 1501 48 874 3.99e-34 143
Msa0161040 MtrunA17_Chr3g0089431 28.910 422 256 16 695 1086 51 458 5.83e-34 137
Msa0161040 MtrunA17_Chr8g0338391 24.320 699 431 21 655 1288 5 670 7.31e-34 142
Msa0161040 MtrunA17_Chr3g0084971 25.922 895 530 37 682 1494 38 881 7.85e-34 142
Msa0161040 MtrunA17_Chr4g0027251 25.441 908 512 39 673 1483 19 858 9.44e-34 142
Msa0161040 MtrunA17_Chr3g0085471 26.517 758 454 32 801 1499 167 880 9.62e-34 142
Msa0161040 MtrunA17_Chr5g0414181 25.571 657 401 23 679 1280 25 648 1.34e-33 141
Msa0161040 MtrunA17_Chr2g0299091 25.413 787 457 31 799 1501 134 874 1.49e-33 141
Msa0161040 MtrunA17_Chr2g0299121 24.514 771 484 26 799 1501 160 900 1.94e-33 140
Msa0161040 MtrunA17_Chr5g0431051 24.886 876 552 32 673 1483 19 853 2.28e-33 140
Msa0161040 MtrunA17_Chr1g0169951 25.154 648 409 17 662 1261 12 631 2.52e-33 139
Msa0161040 MtrunA17_Chr1g0164631 25.497 604 377 17 697 1257 52 625 3.55e-33 140
Msa0161040 MtrunA17_Chr3g0086741 27.690 632 395 18 801 1388 175 788 6.72e-33 138
Msa0161040 MtrunA17_Chr4g0020501 24.057 848 498 29 698 1495 9 760 8.66e-33 138
Msa0161040 MtrunA17_Chr3g0080871 26.658 769 484 27 770 1483 122 865 1.11e-32 138
Msa0161040 MtrunA17_Chr3g0085551 26.053 760 461 27 789 1483 30 753 1.53e-32 137
Msa0161040 MtrunA17_Chr3g0083751 26.434 802 454 33 799 1504 144 905 1.83e-32 138
Msa0161040 MtrunA17_Chr6g0468151 25.915 683 460 20 661 1313 7 673 2.56e-32 137
Msa0161040 MtrunA17_Chr5g0430441 26.080 671 421 23 668 1292 14 655 5.92e-32 135
Msa0161040 MtrunA17_Chr3g0085131 26.734 793 466 35 799 1525 148 891 6.61e-32 135
Msa0161040 MtrunA17_Chr7g0257201 25.116 645 405 20 680 1262 30 658 8.11e-32 135
Msa0161040 MtrunA17_Chr1g0147141 28.171 607 348 25 800 1352 159 731 8.26e-32 135
Msa0161040 MtrunA17_Chr2g0316291 25.820 701 460 21 662 1316 12 698 8.94e-32 135
Msa0161040 MtrunA17_Chr8g0337891 25.592 633 395 19 661 1250 2 601 1.15e-31 134
Msa0161040 MtrunA17_Chr5g0429951 24.972 885 543 33 673 1483 19 856 1.30e-31 134
Msa0161040 MtrunA17_Chr1g0168901 26.592 801 452 38 797 1516 135 880 1.47e-31 134
Msa0161040 MtrunA17_Chr2g0299101 24.468 752 427 27 799 1502 160 818 1.68e-31 134
Msa0161040 MtrunA17_Chr5g0430641 25.141 887 534 36 673 1483 19 851 1.69e-31 134
Msa0161040 MtrunA17_Chr5g0410161 23.384 851 532 27 710 1485 210 1015 1.73e-31 134
Msa0161040 MtrunA17_Chr5g0430581 24.943 870 550 34 673 1483 19 844 2.03e-31 134
Msa0161040 MtrunA17_Chr8g0356251 26.341 820 459 34 799 1520 168 940 3.43e-31 134
Msa0161040 MtrunA17_Chr3g0091041 27.511 458 272 19 698 1128 53 477 4.72e-31 129
Msa0161040 MtrunA17_Chr3g0085091 25.974 770 450 31 803 1494 154 881 7.03e-31 132
Msa0161040 MtrunA17_Chr3g0087731 26.232 690 435 23 840 1494 2 652 7.99e-31 132
Msa0161040 MtrunA17_Chr8g0355411 24.176 637 432 20 672 1270 24 647 9.17e-31 131
Msa0161040 MtrunA17_Chr7g0248431 26.804 485 313 12 662 1114 12 486 9.65e-31 129
Msa0161040 MtrunA17_Chr6g0475491 26.600 500 307 17 655 1116 5 482 1.48e-30 130
Msa0161040 MtrunA17_Chr5g0430511 24.972 893 529 36 673 1481 19 854 1.73e-30 131
Msa0161040 MtrunA17_Chr3g0085751 24.142 874 570 32 699 1507 45 890 1.84e-30 131
Msa0161040 MtrunA17_Chr5g0430621 22.789 882 564 31 673 1502 19 835 2.55e-30 130
Msa0161040 MtrunA17_Chr5g0446611 24.663 815 481 28 678 1434 31 770 5.97e-30 129
Msa0161040 MtrunA17_Chr4g0051651 23.930 631 408 18 680 1246 48 670 6.83e-30 127
Msa0161040 MtrunA17_Chr6g0468021 26.897 725 445 27 653 1334 8 690 7.84e-30 129
Msa0161040 MtrunA17_Chr5g0410261 25.295 763 447 32 807 1484 160 884 9.42e-30 129
Msa0161040 MtrunA17_Chr6g0468271 25.000 668 440 21 679 1313 25 664 9.70e-30 129
Msa0161040 MtrunA17_Chr3g0083591 25.722 762 492 27 805 1514 134 873 1.17e-29 129
Msa0161040 MtrunA17_Chr5g0414201 26.607 560 355 19 752 1280 115 649 1.35e-29 128
Msa0161040 MtrunA17_Chr3g0089931 26.882 465 287 18 674 1117 37 469 1.41e-29 125
Msa0161040 MtrunA17_Chr3g0085171 25.604 828 492 37 752 1501 89 870 2.19e-29 127
Msa0161040 MtrunA17_Chr5g0415471 25.378 662 412 22 695 1300 41 676 2.38e-29 127
Msa0161040 MtrunA17_Chr3g0101211 29.577 284 187 6 838 1114 3 280 2.89e-29 122
Msa0161040 MtrunA17_Chr2g0299151 23.986 863 537 35 713 1501 68 885 3.55e-29 127
Msa0161040 MtrunA17_Chr3g0085701 28.297 417 247 13 693 1098 75 450 4.89e-29 126
Msa0161040 MtrunA17_Chr5g0430721 26.370 675 403 31 673 1292 60 695 5.08e-29 126
Msa0161040 MtrunA17_Chr3g0078361 27.171 449 270 13 838 1239 3 441 5.43e-29 122
Msa0161040 MtrunA17_Chr1g0155321 24.487 633 393 19 673 1245 19 626 5.58e-29 126
Msa0161040 MtrunA17_Chr4g0008461 24.646 917 491 37 727 1517 60 902 6.28e-29 126
Msa0161040 MtrunA17_Chr3g0084811 23.810 840 483 31 764 1508 275 1052 7.87e-29 126
Msa0161040 MtrunA17_Chr6g0468331 26.535 456 297 11 679 1114 25 462 8.47e-29 124
Msa0161040 MtrunA17_Chr7g0257191 22.931 894 531 27 680 1513 30 825 1.21e-28 125
Msa0161040 MtrunA17_Chr3g0091971 24.905 791 464 25 774 1508 115 831 1.60e-28 125
Msa0161040 MtrunA17_Chr1g0155991 24.915 883 541 37 673 1483 19 851 2.73e-28 124
Msa0161040 MtrunA17_Chr6g0456131 26.026 780 455 27 794 1485 134 879 5.89e-28 123
Msa0161040 MtrunA17_Chr3g0113781 27.253 466 269 16 857 1278 3 442 9.43e-28 121
Msa0161040 MtrunA17_Chr7g0257221 22.468 632 412 17 680 1261 30 633 1.24e-27 121
Msa0161040 MtrunA17_Chr5g0430951 24.602 691 413 24 673 1292 19 672 1.31e-27 121
Msa0161040 MtrunA17_Chr3g0085111 26.542 746 473 25 803 1494 150 874 1.51e-27 122
Msa0161040 MtrunA17_Chr6g0470011 23.957 647 440 18 679 1292 25 652 2.83e-27 120
Msa0161040 MtrunA17_Chr6g0468341 25.111 450 317 10 675 1112 21 462 2.85e-27 120
Msa0161040 MtrunA17_Chr6g0484551 25.535 607 369 23 715 1278 71 637 3.53e-27 120
Msa0161040 MtrunA17_Chr3g0085931 25.522 670 449 22 679 1318 25 674 6.45e-27 119
Msa0161040 MtrunA17_Chr8g0338261 24.962 657 421 26 655 1264 5 636 8.02e-27 119
Msa0161040 MtrunA17_Chr8g0338671 27.711 498 319 14 779 1247 22 507 1.01e-26 117
Msa0161040 MtrunA17_Chr3g0091011 26.350 611 360 23 791 1357 141 705 1.69e-26 118
Msa0161040 MtrunA17_Chr8g0346831 23.842 734 441 23 655 1320 5 688 1.91e-26 118
Msa0161040 MtrunA17_Chr6g0470081 24.437 622 423 17 679 1269 25 630 2.04e-26 118
Msa0161040 MtrunA17_Chr5g0430331 24.828 435 276 13 673 1079 19 430 2.16e-26 114
Msa0161040 MtrunA17_Chr8g0351821 25.785 446 294 13 679 1103 25 454 2.26e-26 114
Msa0161040 MtrunA17_Chr5g0430901 27.005 374 234 12 675 1023 21 380 4.02e-26 116
Msa0161040 MtrunA17_Chr6g0467911 24.920 626 415 21 679 1269 25 630 4.72e-26 116
Msa0161040 MtrunA17_Chr3g0087301 25.933 563 343 20 752 1280 115 637 4.81e-26 117
Msa0161040 MtrunA17_Chr3g0083681 25.940 771 473 30 799 1508 146 879 7.26e-26 116
Msa0161040 MtrunA17_Chr5g0414231 24.318 440 293 13 679 1090 25 452 1.67e-25 112
Msa0161040 MtrunA17_Chr4g0071021 24.385 447 282 13 673 1094 19 434 4.35e-25 110
Msa0161040 MtrunA17_Chr7g0257551 26.260 377 221 10 755 1093 43 400 4.45e-25 110
Msa0161040 MtrunA17_Chr8g0338251 24.413 639 439 23 654 1263 4 627 6.23e-25 112
Msa0161040 MtrunA17_Chr6g0456121 24.721 627 405 23 654 1247 7 599 1.84e-24 111
Msa0161040 MtrunA17_Chr3g0100781 25.215 349 229 10 680 998 26 372 5.10e-24 105
Msa0161040 MtrunA17_Chr3g0085161 25.866 491 311 13 804 1274 30 487 5.52e-24 110
Msa0161040 MtrunA17_Chr8g0338361 26.446 484 293 18 804 1247 29 489 1.25e-23 107
Msa0161040 MtrunA17_Chr8g0352211 24.648 710 445 22 589 1247 950 1620 4.11e-23 107
Msa0161040 MtrunA17_Chr6g0470021 25.787 508 327 18 797 1262 37 536 5.21e-23 106
Msa0161040 MtrunA17_Chr7g0218941 24.575 647 402 21 655 1248 5 618 6.86e-23 106
Msa0161040 MtrunA17_Chr5g0415511 27.273 352 236 9 752 1091 115 458 1.06e-22 105
Msa0161040 MtrunA17_Chr2g0308491 31.225 253 146 10 833 1070 20 259 6.64e-22 97.1
Msa0161040 MtrunA17_Chr8g0355071 27.857 280 174 10 851 1115 28 294 8.59e-22 97.8
Msa0161040 MtrunA17_Chr3g0082321 23.482 626 365 17 695 1263 50 618 1.20e-21 102
Msa0161040 MtrunA17_Chr5g0413811 28.947 418 245 17 902 1292 43 435 2.06e-20 97.8
Msa0161040 MtrunA17_Chr5g0417251 26.087 414 267 13 902 1292 32 429 3.24e-20 97.1
Msa0161040 MtrunA17_Chr3g0083641 23.785 782 471 29 799 1504 144 876 1.81e-19 95.5
Msa0161040 MtrunA17_Chr4g0010491 27.778 324 204 13 765 1072 118 427 2.26e-19 92.8
Msa0161040 MtrunA17_Chr5g0414291 28.777 278 185 7 752 1023 119 389 2.69e-19 92.4
Msa0161040 MtrunA17_Chr5g0417301 23.052 616 390 15 668 1256 14 572 9.00e-19 92.4
Msa0161040 MtrunA17_Chr3g0100701 26.216 473 282 18 1074 1515 284 720 1.33e-18 92.4
Msa0161040 MtrunA17_Chr3g0100701 26.442 208 132 5 680 866 26 233 4.72e-13 74.3
Msa0161040 MtrunA17_Chr2g0299141 26.562 384 223 12 935 1263 13 392 1.42e-18 90.5
Msa0161040 MtrunA17_Chr6g0468401 26.667 315 211 8 675 975 21 329 1.53e-18 89.0
Msa0161040 MtrunA17_Chr6g0469991 25.872 344 225 11 679 1003 25 357 2.83e-17 85.5
Msa0161040 MtrunA17_Chr5g0415491 33.333 171 108 3 833 999 53 221 5.26e-17 82.0
Msa0161040 MtrunA17_Chr3g0086071 26.892 502 296 25 1049 1504 20 496 8.13e-17 86.3
Msa0161040 MtrunA17_Chr3g0091961 27.676 383 224 17 956 1307 6 366 1.56e-16 84.0
Msa0161040 MtrunA17_Chr7g0248411 29.439 214 136 3 804 1003 98 310 3.39e-16 81.6
Msa0161040 MtrunA17_Chr2g0299131 29.018 224 141 5 804 1014 2 220 4.15e-15 76.3
Msa0161040 MtrunA17_Chr3g0101421 25.541 231 147 5 680 886 26 255 7.82e-15 77.0
Msa0161040 MtrunA17_Chr3g0085721 28.507 221 139 7 821 1030 158 370 1.98e-14 77.0
Msa0161040 MtrunA17_Chr8g0338681 30.000 230 150 7 862 1084 1 226 2.11e-14 74.7
Msa0161040 MtrunA17_Chr3g0081841 28.986 207 131 6 804 999 8 209 3.17e-14 77.4
Msa0161040 MtrunA17_Chr6g0468141 25.267 281 179 10 747 1021 1 256 3.20e-14 74.7
Msa0161040 MtrunA17_Chr1g0169941 29.032 217 144 5 906 1118 51 261 2.08e-13 73.6
Msa0161040 MtrunA17_Chr2g0282981 25.479 365 234 12 678 1016 31 383 2.40e-13 74.3
Msa0161040 MtrunA17_Chr3g0100791 26.835 436 267 14 1090 1497 3 414 4.40e-13 73.6
Msa0161040 MtrunA17_Chr8g0392521 30.542 203 109 6 795 975 124 316 5.05e-13 72.0
Msa0161040 MtrunA17_Chr5g0410301 28.707 317 188 14 1196 1485 548 853 5.22e-13 74.3
Msa0161040 MtrunA17_Chr5g0410301 26.984 315 165 16 802 1090 137 412 1.21e-11 69.7
Msa0161040 MtrunA17_Chr3g0091121 27.612 268 174 8 1050 1300 30 294 1.14e-11 69.7
Msa0161040 MtrunA17_Chr1g0189281 25.949 316 197 11 1196 1494 77 372 1.64e-11 68.2
Msa0161040 MtrunA17_Chr5g0410481 23.970 534 292 24 841 1316 179 656 3.21e-11 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0161040 AT3G46530.1 28.927 885 497 32 648 1475 3 812 1.00e-64 238
Msa0161040 AT3G07040.1 25.281 890 575 28 680 1506 26 888 4.41e-58 219
Msa0161040 AT5G43470.3 26.480 895 553 26 678 1505 24 880 1.68e-57 216
Msa0161040 AT5G43470.2 26.480 895 553 26 678 1505 24 880 1.68e-57 216
Msa0161040 AT5G43470.4 26.480 895 553 26 678 1505 24 880 1.68e-57 216
Msa0161040 AT5G43470.1 26.480 895 553 26 678 1505 24 880 1.68e-57 216
Msa0161040 AT5G48620.6 26.209 889 563 28 678 1505 24 880 1.93e-57 216
Msa0161040 AT5G48620.1 26.209 889 563 28 678 1505 24 880 1.93e-57 216
Msa0161040 AT5G48620.4 26.209 889 563 28 678 1505 24 880 1.93e-57 216
Msa0161040 AT5G48620.2 26.209 889 563 28 678 1505 24 880 1.93e-57 216
Msa0161040 AT5G48620.3 26.209 889 563 28 678 1505 24 880 1.93e-57 216
Msa0161040 AT5G48620.5 26.209 889 563 28 678 1505 24 880 1.93e-57 216
Msa0161040 AT3G46710.1 27.045 880 515 32 678 1489 24 844 1.01e-53 204
Msa0161040 AT3G46730.1 27.126 870 526 30 677 1489 23 841 4.40e-53 202
Msa0161040 AT1G53350.1 27.128 881 559 25 680 1505 26 878 8.94e-53 202
Msa0161040 AT5G35450.2 26.077 905 531 31 680 1505 26 871 1.48e-52 201
Msa0161040 AT5G35450.1 26.077 905 531 31 680 1505 26 871 1.48e-52 201
Msa0161040 AT1G59780.1 24.943 870 576 23 672 1499 23 857 1.44e-48 189
Msa0161040 AT1G59620.2 25.926 756 429 24 803 1497 23 708 4.67e-45 176
Msa0161040 AT1G58400.3 24.945 906 580 27 672 1510 18 890 1.86e-43 172
Msa0161040 AT1G58400.2 24.945 906 580 27 672 1510 18 890 1.86e-43 172
Msa0161040 AT1G58390.1 25.195 897 537 31 680 1494 26 870 1.53e-42 170
Msa0161040 AT1G58390.2 25.195 897 537 31 680 1494 26 870 1.53e-42 170
Msa0161040 AT1G59218.1 24.747 889 541 28 680 1486 26 868 4.18e-41 166
Msa0161040 AT1G59218.1 36.552 145 85 3 1346 1488 827 966 2.21e-15 82.4
Msa0161040 AT1G59218.2 24.747 889 541 28 680 1486 26 868 4.18e-41 166
Msa0161040 AT1G59218.2 36.552 145 85 3 1346 1488 827 966 2.21e-15 82.4
Msa0161040 AT1G59218.3 24.747 889 541 28 680 1486 26 868 4.18e-41 166
Msa0161040 AT1G59218.3 36.552 145 85 3 1346 1488 827 966 2.21e-15 82.4
Msa0161040 AT1G58848.1 24.747 889 541 28 680 1486 26 868 4.18e-41 166
Msa0161040 AT1G58848.1 36.552 145 85 3 1346 1488 827 966 2.21e-15 82.4
Msa0161040 AT1G58848.2 24.747 889 541 28 680 1486 26 868 4.18e-41 166
Msa0161040 AT1G58848.2 36.552 145 85 3 1346 1488 827 966 2.21e-15 82.4
Msa0161040 AT1G58400.1 24.366 907 574 27 672 1510 18 880 5.64e-40 161
Msa0161040 AT1G58410.1 25.407 921 566 32 672 1514 16 893 2.69e-39 159
Msa0161040 AT1G58410.4 25.407 921 566 32 672 1514 16 893 2.69e-39 159
Msa0161040 AT1G58410.2 25.407 921 566 32 672 1514 16 893 2.69e-39 159
Msa0161040 AT1G59124.2 25.228 876 545 29 680 1486 26 860 6.01e-39 159
Msa0161040 AT1G59124.2 34.862 109 71 0 1392 1500 862 970 2.14e-12 72.8
Msa0161040 AT1G58807.1 25.228 876 545 29 680 1486 26 860 6.01e-39 159
Msa0161040 AT1G58807.1 34.862 109 71 0 1392 1500 862 970 2.14e-12 72.8
Msa0161040 AT1G58602.2 25.473 899 536 33 672 1486 18 866 3.19e-38 157
Msa0161040 AT1G58602.1 25.473 899 536 33 672 1486 18 866 3.19e-38 157
Msa0161040 AT1G50180.1 26.240 625 405 16 680 1260 26 638 1.37e-37 154
Msa0161040 AT1G10920.1 27.133 715 401 24 802 1445 35 700 9.63e-36 147
Msa0161040 AT1G10920.2 27.133 715 401 24 802 1445 35 700 9.63e-36 147
Msa0161040 AT1G10920.4 27.133 715 401 24 802 1445 35 700 9.63e-36 147
Msa0161040 AT1G59124.1 25.173 866 538 30 680 1476 26 850 1.13e-35 147
Msa0161040 AT1G58807.2 25.173 866 538 30 680 1476 26 850 1.13e-35 147
Msa0161040 AT3G50950.2 25.405 740 460 29 676 1359 22 725 3.65e-31 133
Msa0161040 AT3G50950.1 25.405 740 460 29 676 1359 22 725 3.65e-31 133
Msa0161040 AT1G58410.3 24.508 914 551 32 672 1514 16 861 2.28e-29 127
Msa0161040 AT3G14470.1 26.691 547 341 19 791 1297 156 682 1.67e-28 125
Msa0161040 AT3G14470.2 26.691 547 341 19 791 1297 156 682 1.67e-28 125
Msa0161040 AT3G14460.1 27.022 507 322 14 807 1279 168 660 3.39e-27 121
Msa0161040 AT1G10920.5 27.526 574 306 19 938 1445 1 530 8.61e-26 114
Msa0161040 AT1G10920.3 27.526 574 306 19 938 1445 1 530 8.61e-26 114
Msa0161040 AT1G59780.2 23.340 467 330 11 672 1119 18 475 5.13e-25 113
Msa0161040 AT1G59780.2 31.290 310 182 10 1195 1499 569 852 1.21e-22 105
Msa0161040 AT1G12280.1 23.176 466 288 19 830 1249 178 619 6.66e-17 87.4
Msa0161040 AT1G63350.4 22.794 816 515 32 703 1485 64 797 2.17e-15 82.4
Msa0161040 AT1G12220.1 24.043 470 279 22 830 1249 178 619 1.43e-13 76.6
Msa0161040 AT1G12220.2 24.043 470 279 22 830 1249 178 619 1.43e-13 76.6
Msa0161040 AT1G12220.3 24.043 470 279 22 830 1249 57 498 2.23e-13 75.9
Msa0161040 AT1G12210.1 23.171 492 308 18 804 1250 154 620 7.30e-13 74.3
Msa0161040 AT1G63350.3 22.391 594 398 22 703 1272 64 618 2.43e-12 72.4
Msa0161040 AT1G63350.2 22.391 594 398 22 703 1272 64 618 2.43e-12 72.4
Msa0161040 AT1G63350.1 22.727 594 396 23 703 1272 64 618 3.22e-12 72.0

Find 343 sgRNAs with CRISPR-Local

Find 390 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTGTACACTTCAAATTAT+TGG 0.114305 1_4:+35139938 None:intergenic
TTCATCAACAATTATGAAAA+TGG 0.146644 1_4:+35140547 None:intergenic
ACAAGAGCTTGTACCTTTAT+TGG 0.164534 1_4:-35139652 Msa0161040:CDS
ATACTCTTCAATCAGGATTT+TGG 0.164779 1_4:+35141495 None:intergenic
AGCTTCATGTCTTAAAATTT+TGG 0.171220 1_4:-35137177 Msa0161040:CDS
AACATTTCCAATGCAATAAA+TGG 0.171502 1_4:+35139686 None:intergenic
TTGCATGGACTGTGAATTTA+TGG 0.181337 1_4:-35139971 Msa0161040:CDS
TGATATTCCCAGCTGAATTT+TGG 0.186076 1_4:-35138366 Msa0161040:CDS
GAGGAGGAGGCGGCTGCTTC+TGG 0.187360 1_4:+35139561 None:intergenic
ATTGGTCAATATCACAAAAT+TGG 0.187452 1_4:-35137584 Msa0161040:CDS
AACCAGTTTGTTGCAGAAAT+TGG 0.212218 1_4:-35138937 Msa0161040:CDS
ACAAAATTGAAGAAGCTTCT+AGG 0.227136 1_4:-35139263 Msa0161040:CDS
CAGTTGCTCCACCCAGATTC+TGG 0.237544 1_4:+35139419 None:intergenic
CAAGGAAAGACGGTCTAAAA+TGG 0.241960 1_4:-35140864 Msa0161040:CDS
AATGGTGAATTTCTTATTGA+TGG 0.275318 1_4:-35139807 Msa0161040:CDS
CGGCGAATAATGGACTTCTT+TGG 0.278672 1_4:+35138144 None:intergenic
ATTGATGGATGCGCTGCTTC+TGG 0.280477 1_4:-35139475 Msa0161040:CDS
CAAACAGTCCCCACAGAGTT+TGG 0.298043 1_4:+35137644 None:intergenic
CAAGAGCTTGTACCTTTATT+GGG 0.310456 1_4:-35139651 Msa0161040:CDS
AAAACAACCAACCTTCTTAC+AGG 0.318311 1_4:+35138340 None:intergenic
CGCTGCATTACTTGGATTGT+TGG 0.319589 1_4:-35139072 Msa0161040:CDS
TATTCTACTGAAATTTAGTT+TGG 0.319852 1_4:+35136951 None:intergenic
TGTTGGGTGGTGGGACAATT+AGG 0.321073 1_4:-35141468 Msa0161040:CDS
TCTCACTGACATGTATTTAC+TGG 0.321761 1_4:-35137389 Msa0161040:CDS
CCTCTAGTTCCGAATGTGAT+AGG 0.323145 1_4:+35137308 None:intergenic
TCCTCGTATCGGCCTGTCAT+GGG 0.325262 1_4:-35139537 Msa0161040:CDS
GATGACGGTGCTTCTCTTCC+TGG 0.325983 1_4:+35141130 None:intergenic
GTTTAAGTTTCACCCTGTTC+TGG 0.327783 1_4:-35140219 Msa0161040:CDS
TTATGCCATCAACAATTAAC+AGG 0.334760 1_4:+35138833 None:intergenic
TCAGATAGAGAATTACCTTT+TGG 0.334882 1_4:+35137670 None:intergenic
ATCTTGATAAAGATGATATC+TGG 0.335478 1_4:-35138110 Msa0161040:CDS
ATCTGCAACCCGGCGAATAA+TGG 0.343829 1_4:+35138134 None:intergenic
CTTGGTTTAGTGACATTGAT+TGG 0.348228 1_4:+35137551 None:intergenic
CTTTCACGGCTAAGGTATCT+TGG 0.348228 1_4:-35137865 Msa0161040:CDS
TGCACAAGAGATGGGAGAAT+TGG 0.348713 1_4:-35139451 Msa0161040:CDS
CAATAACAGGGCAAACAAAA+AGG 0.349623 1_4:+35140624 None:intergenic
AGAAACGTCGCTGCATTACT+TGG 0.351103 1_4:-35139080 Msa0161040:CDS
ACTTAGGCCTTCCGCACTTT+CGG 0.352832 1_4:+35139875 None:intergenic
GTCCATCAGGAAGCATTTGC+AGG 0.356615 1_4:+35137071 None:intergenic
TCTGCTTCCCGTTGACATAT+CGG 0.358818 1_4:+35138765 None:intergenic
TGATGGAGATGCAAAAGTTA+AGG 0.359422 1_4:-35139790 Msa0161040:CDS
AAGTACCTGTTAATTGTTGA+TGG 0.361529 1_4:-35138838 Msa0161040:CDS
TGGAGGGAAGATCCAGAATC+TGG 0.361715 1_4:-35139431 Msa0161040:CDS
GGCGAATAATGGACTTCTTT+GGG 0.362760 1_4:+35138145 None:intergenic
AAGTCGGAAAGAACAATAAC+AGG 0.366660 1_4:+35140611 None:intergenic
GTGCGGAAGGCCTAAGTAAA+AGG 0.370019 1_4:-35139869 Msa0161040:CDS
CATAATCGGCTGAAAGATAA+AGG 0.371483 1_4:+35140825 None:intergenic
AATTATACTGAAAGTGTTGC+AGG 0.378072 1_4:-35140902 Msa0161040:CDS
TTGGTCAATATCACAAAATT+GGG 0.378261 1_4:-35137583 Msa0161040:CDS
CTGAGAGTCGTGTCTCAAAA+TGG 0.385569 1_4:-35139825 Msa0161040:CDS
GGAGATGGGGAGTTCTGTAT+TGG 0.389135 1_4:-35141267 Msa0161040:CDS
AAAAGGAACATTGCCAGAAC+AGG 0.389180 1_4:+35140206 None:intergenic
GTATGCCCATTGCCCAATAA+AGG 0.392572 1_4:+35139639 None:intergenic
TCCAACCACACTGGATTCAT+TGG 0.393799 1_4:+35139149 None:intergenic
CAACAAACAGTTGATATCCT+TGG 0.395207 1_4:+35139740 None:intergenic
TGCCAATTTCTGCAACAAAC+TGG 0.398715 1_4:+35138935 None:intergenic
TACTTGAGCATGGCCGACTT+TGG 0.399086 1_4:-35141562 None:intergenic
ATACTCTACCTAGCTCAATA+TGG 0.399489 1_4:-35137753 Msa0161040:CDS
GGAGTGGTCAAGAGTGTTGC+GGG 0.399750 1_4:-35138491 Msa0161040:CDS
AGTCAAACTACTATAGTTAC+TGG 0.400419 1_4:-35141055 Msa0161040:CDS
AACAACTTGCTTATAGATGA+TGG 0.401078 1_4:+35137814 None:intergenic
GCTTCAGTTTCACCCTGTCC+TGG 0.402088 1_4:-35140036 Msa0161040:CDS
AAGTATATCGGGACTCGAAT+TGG 0.402237 1_4:-35140773 Msa0161040:CDS
CAGGCCGGGCAGCGTGGGTA+CGG 0.403249 1_4:-35141394 Msa0161040:CDS
ACTCAAGAGGGGAGTAAACC+TGG 0.408887 1_4:-35138003 Msa0161040:CDS
GATCGTACCTGCTGCATGTT+GGG 0.409232 1_4:+35138711 None:intergenic
CAGAAGGGAAAAGGAATTGA+TGG 0.412266 1_4:-35139490 Msa0161040:CDS
TCAGGAAGCATTTGCAGGTT+CGG 0.414104 1_4:+35137076 None:intergenic
ATGATATTGTGTCTAATTTG+AGG 0.414613 1_4:-35140976 Msa0161040:CDS
CTTCTTCAACATCATCATAC+TGG 0.414851 1_4:+35140502 None:intergenic
TTGGAAGCTGTGGTATTTGG+AGG 0.415600 1_4:-35137158 Msa0161040:CDS
CTCCTCGTATCGGCCTGTCA+TGG 0.418314 1_4:-35139538 Msa0161040:CDS
ATTTGGCTTATGCTTCAGTT+TGG 0.423573 1_4:+35139350 None:intergenic
TTGTACCTTTATTGGGCAAT+GGG 0.424753 1_4:-35139644 Msa0161040:CDS
ATTTCAGTCTCAGCGATTGA+AGG 0.427057 1_4:+35137473 None:intergenic
CCGATACGAGGAGGAGGAGG+AGG 0.428890 1_4:+35139548 None:intergenic
GATGGAGATGCAAAAGTTAA+GGG 0.431399 1_4:-35139789 Msa0161040:CDS
GTTGAGCTGTCATTGCCTCT+TGG 0.434330 1_4:+35137533 None:intergenic
GAAAGTCTTGCTATGCGATT+AGG 0.434566 1_4:+35137883 None:intergenic
AGGAAGGCCATTTATTGCAT+TGG 0.435591 1_4:-35139693 Msa0161040:CDS
AGAAGAAGAGATGGAAGAGA+AGG 0.435956 1_4:-35140307 Msa0161040:CDS
TCATCAACAATTATGAAAAT+GGG 0.440245 1_4:+35140548 None:intergenic
TGCTATGCGATTAGGCAACT+TGG 0.441680 1_4:+35137891 None:intergenic
GATCAAATACAAAGTTGGTC+TGG 0.441683 1_4:-35138451 Msa0161040:CDS
GAGAAGTTGAAGGAAGTTGC+TGG 0.443179 1_4:-35141340 Msa0161040:CDS
GAATTTACACTTGAAGTCCT+TGG 0.443846 1_4:-35137425 Msa0161040:CDS
AGTTTGGACGACTTGACAAT+TGG 0.444506 1_4:+35136967 None:intergenic
TTCTTCTACAGTAATTTGTT+CGG 0.446807 1_4:+35138903 None:intergenic
TTGTGATCAAATCGGTGAAA+AGG 0.447826 1_4:-35141291 Msa0161040:CDS
TATACTTGGATACCTTGAAC+AGG 0.449054 1_4:-35138795 Msa0161040:CDS
TTGACATGCTTTAGTCCATC+AGG 0.449188 1_4:+35137058 None:intergenic
AAAATCTTTCAAAAGTATCA+TGG 0.454360 1_4:+35137279 None:intergenic
TTTCCAGTTGTCTGAGACAT+GGG 0.454707 1_4:+35137110 None:intergenic
GAGGTCGATGCAGGGATTGT+TGG 0.455665 1_4:-35141419 Msa0161040:CDS
GTCTAAAGAAGAAGAAGAGA+TGG 0.456263 1_4:-35140316 Msa0161040:CDS
AAGAAATTGTAATGAAATGT+GGG 0.459845 1_4:-35138576 Msa0161040:CDS
GGATTGACAAACACAAGGTT+GGG 0.459952 1_4:-35141246 Msa0161040:CDS
TGACAGGGTAAATCTGAAAC+AGG 0.460077 1_4:+35140393 None:intergenic
CTGTCCAAGCCATCCTTCAC+TGG 0.461948 1_4:+35137607 None:intergenic
AGAAACTTCTCAAGTATACT+TGG 0.463103 1_4:-35138809 Msa0161040:CDS
TACCTTTCTGCAACTAGCTC+CGG 0.463350 1_4:+35138268 None:intergenic
GAAACAAAACTTATCAAGGT+TGG 0.463914 1_4:-35138601 Msa0161040:CDS
CCAATCAATCAGAAGGGAAA+AGG 0.465101 1_4:-35139499 Msa0161040:CDS
GTTCTTAATAAGAAGGTAGA+TGG 0.466490 1_4:-35139294 Msa0161040:CDS
GTTGAGGTGGAAATCTGCTT+CGG 0.466618 1_4:+35137692 None:intergenic
AAGCTCTCTATTGACAAGTC+TGG 0.468736 1_4:+35140668 None:intergenic
GACTCCAGTGAAGGATGGCT+TGG 0.468832 1_4:-35137611 Msa0161040:CDS
TCTATTGACAAGTCTGGTAC+AGG 0.469313 1_4:+35140674 None:intergenic
GAGAAGAAAAGCATATCGTT+TGG 0.470345 1_4:-35139241 Msa0161040:CDS
TTTGTGGGTTGCCGAGAGTC+TGG 0.470851 1_4:-35138320 Msa0161040:CDS
AAGAGAGCTGAGGTCGATGC+AGG 0.472824 1_4:-35141428 Msa0161040:CDS
TGAACTTACCCTATCACATT+CGG 0.473670 1_4:-35137317 Msa0161040:CDS
AAAAGGAACGTTCCCATGAC+AGG 0.473758 1_4:+35140377 None:intergenic
TTCTCTTTGAGCCCCATGAC+AGG 0.474048 1_4:+35139525 None:intergenic
GTGAATAACCCAATATGAAA+AGG 0.474943 1_4:+35140189 None:intergenic
CTTCCCTTAAAACCTACTAC+AGG 0.476211 1_4:-35138053 Msa0161040:CDS
GCCTCAGCATTGATTTCCAT+TGG 0.479134 1_4:+35137004 None:intergenic
CTTGTACCTTTATTGGGCAA+TGG 0.479607 1_4:-35139645 Msa0161040:CDS
GGACGACTTGACAATTGGTT+GGG 0.483867 1_4:+35136972 None:intergenic
AAAAGGAACACTGCCAGGAC+AGG 0.484622 1_4:+35140023 None:intergenic
ACTCCCATGTCTCAGACAAC+TGG 0.484976 1_4:-35137113 Msa0161040:CDS
CTGCTTCCCGTTGACATATC+GGG 0.485096 1_4:+35138766 None:intergenic
GTAAATTACTCAATATGAAA+AGG 0.485727 1_4:+35140006 None:intergenic
GTTTCAGATTTACCCTGTCA+TGG 0.486409 1_4:-35140390 Msa0161040:CDS
ACAGGGATCCAAAATTCAGC+TGG 0.487274 1_4:+35138358 None:intergenic
GTTGTTCACAAGACATTTGA+AGG 0.487975 1_4:-35138644 Msa0161040:CDS
GCTTCTGGATGCACAAGAGA+TGG 0.488010 1_4:-35139460 Msa0161040:CDS
ACTTGACAGAGTTGATAGAT+AGG 0.488861 1_4:-35138246 Msa0161040:CDS
CAGGGATTGTTGGAACAGGC+CGG 0.490545 1_4:-35141409 Msa0161040:CDS
ATCGGGTATTGCCCTGTTCA+AGG 0.490637 1_4:+35138783 None:intergenic
TGGATTGACAAACACAAGGT+TGG 0.490826 1_4:-35141247 Msa0161040:CDS
TTGAGTATCAAAGGAAAGAA+AGG 0.490924 1_4:+35138020 None:intergenic
GGAGAGAACGTCCCTGTAGT+AGG 0.491426 1_4:+35138041 None:intergenic
GAAGAAGAGATGGAAGAGAA+GGG 0.492454 1_4:-35140306 Msa0161040:CDS
AAGGAAAGACGGTCTAAAAT+GGG 0.492622 1_4:-35140863 Msa0161040:CDS
ATCTGGAATGATCACATTCA+TGG 0.495152 1_4:-35138093 Msa0161040:CDS
GGACAATTAGGCACGTAGAA+TGG 0.496324 1_4:-35141456 Msa0161040:CDS
AGAAGAAGAAATGGATGGGA+AGG 0.496501 1_4:-35140472 Msa0161040:CDS
GATCAAGCTTCTCCATTGCT+AGG 0.496664 1_4:+35141086 None:intergenic
ATGAAGATCAAATACAAAGT+TGG 0.497520 1_4:-35138456 Msa0161040:CDS
ACCTAGCTCAATATGGAAGA+TGG 0.499264 1_4:-35137746 Msa0161040:CDS
ATCGCATAGCAAGACTTTCA+CGG 0.499763 1_4:-35137879 Msa0161040:CDS
GAAGAAGAAATGGAAGGGAA+TGG 0.501135 1_4:-35140123 Msa0161040:CDS
GAGATGGTGGAACGAGTAAG+AGG 0.502359 1_4:-35141019 Msa0161040:CDS
AAAGAAGTCCATTATTCGCC+GGG 0.502567 1_4:-35138142 Msa0161040:CDS
AACTTGACACGGTAGCAGAC+TGG 0.502636 1_4:-35137513 Msa0161040:CDS
GAGTATGCAGTGTTGGGTGG+TGG 0.503321 1_4:-35141478 Msa0161040:CDS
GAAGGATGGCTTGGACAGAT+TGG 0.506758 1_4:-35137602 Msa0161040:CDS
TGGACGACTTGACAATTGGT+TGG 0.506974 1_4:+35136971 None:intergenic
AGACATCTTCTCAGATAAGA+AGG 0.507154 1_4:+35138400 None:intergenic
TGGTTTGTCGTACAATTTGA+AGG 0.508607 1_4:+35138955 None:intergenic
GGATAGACCGTTGGCGACGT+TGG 0.509278 1_4:+35141516 None:intergenic
CTTTCCTTTGATACTCAAGA+GGG 0.509783 1_4:-35138015 Msa0161040:CDS
ATCTGACCTCCAAACTCTGT+GGG 0.511518 1_4:-35137653 Msa0161040:CDS
GCAATACCCGATATGTCAAC+GGG 0.511730 1_4:-35138772 Msa0161040:CDS
AATGACAGATTGAACTTCAA+GGG 0.512131 1_4:+35139386 None:intergenic
TCCACGCAATAACTTCAGTA+AGG 0.512732 1_4:+35140339 None:intergenic
TAATGACAGATTGAACTTCA+AGG 0.514711 1_4:+35139385 None:intergenic
TAGCAAGACTTTCACGGCTA+AGG 0.514964 1_4:-35137873 Msa0161040:CDS
TAGACCGTTGGCGACGTTGG+CGG 0.515603 1_4:+35141519 None:intergenic
AGGCCGATACGAGGAGGAGG+AGG 0.518037 1_4:+35139545 None:intergenic
CAAAGAAGTCCATTATTCGC+CGG 0.518217 1_4:-35138143 Msa0161040:CDS
GTCAGAAACAAAACTTATCA+AGG 0.518726 1_4:-35138605 Msa0161040:CDS
AGTGTCTCTGTTGAAACTCC+AGG 0.519408 1_4:-35141148 Msa0161040:CDS
ACTTGGATTGTTGGAATCGA+AGG 0.519737 1_4:-35139063 Msa0161040:CDS
AAGTTACCTACTTGATGCCC+AGG 0.520881 1_4:+35137985 None:intergenic
CTCACTGACATGTATTTACT+GGG 0.521980 1_4:-35137388 Msa0161040:CDS
TAAGTAAAAGGCAGAGAGCA+TGG 0.522497 1_4:-35139857 Msa0161040:CDS
AATCGGTGAAAAGGAGGAGA+TGG 0.523751 1_4:-35141282 Msa0161040:CDS
TTCTCCGTACCCACGCTGCC+CGG 0.523864 1_4:+35141390 None:intergenic
CGAGTGGGAAGAGAAGTTGA+AGG 0.525152 1_4:-35141350 Msa0161040:CDS
ACTCCCCTCTTGAGTATCAA+AGG 0.525351 1_4:+35138011 None:intergenic
GATGCAGGGATTGTTGGAAC+AGG 0.525804 1_4:-35141413 Msa0161040:CDS
ACAAGAGATGGGAGAATTGG+AGG 0.526027 1_4:-35139448 Msa0161040:CDS
TACTTTATGAAGTTATTGCA+TGG 0.526228 1_4:-35139986 Msa0161040:CDS
GCTATGCGATTAGGCAACTT+GGG 0.526299 1_4:+35137892 None:intergenic
TTTCAGATTTACCCTGTCAT+GGG 0.527644 1_4:-35140389 Msa0161040:CDS
AAATCTTTCAAAAGTATCAT+GGG 0.529570 1_4:+35137280 None:intergenic
AGATCGTACCTGCTGCATGT+TGG 0.530253 1_4:+35138710 None:intergenic
GGACAGGGTGAAACTGAAGC+AGG 0.530287 1_4:+35140039 None:intergenic
TTGGATCCCTGTAAGAAGGT+TGG 0.530555 1_4:-35138347 Msa0161040:CDS
GAGATTTATGTTATTCTCCA+AGG 0.530850 1_4:+35137408 None:intergenic
AGAAAGTCCAATCAATCAGA+AGG 0.532596 1_4:-35139506 Msa0161040:CDS
CTCTAGTTCCGAATGTGATA+GGG 0.534113 1_4:+35137309 None:intergenic
CTCAGTTGTGTCCCTAGCAA+TGG 0.535259 1_4:-35141098 Msa0161040:CDS
AAGAGTTGCAGAAGATCCGC+AGG 0.535715 1_4:-35141222 Msa0161040:CDS
ATGAGAGACATCTCTCAGAC+TGG 0.535737 1_4:-35141196 Msa0161040:CDS
CTTCTTATTAAGAACACGTC+GGG 0.536218 1_4:+35139302 None:intergenic
AGATTCTTGATATATCAGAT+AGG 0.536308 1_4:-35139713 Msa0161040:CDS
ATATGAAAAGGAACACTGCC+AGG 0.536588 1_4:+35140018 None:intergenic
AGATTTCCACCTCAACCAAA+AGG 0.537206 1_4:-35137685 Msa0161040:CDS
AGGGATTGTTGGAACAGGCC+GGG 0.537235 1_4:-35141408 Msa0161040:CDS
CTTCTGGATGCACAAGAGAT+GGG 0.537407 1_4:-35139459 Msa0161040:CDS
ACACTGCATACTCTTCAATC+AGG 0.538518 1_4:+35141488 None:intergenic
TAAGACAGCACTAGCAAAGT+TGG 0.538989 1_4:-35139034 Msa0161040:CDS
TGATGACAGACAAGCTCTGA+TGG 0.539546 1_4:-35139121 Msa0161040:CDS
TACTAGATGATGAAACTAGT+TGG 0.539596 1_4:-35138669 Msa0161040:CDS
AAACACAGTGTTCGAAGATG+TGG 0.540476 1_4:+35137256 None:intergenic
AATGTAGCCCAACATGCAGC+AGG 0.543963 1_4:-35138718 Msa0161040:CDS
TACTATAGTTACTGGTGAAG+AGG 0.544752 1_4:-35141047 Msa0161040:CDS
GAGATGAAGAAGGTCGACCT+TGG 0.546770 1_4:-35137447 Msa0161040:CDS
TCCATCTTCCATATTGAGCT+AGG 0.547550 1_4:+35137745 None:intergenic
AGGTAATTTCATCCTTGTCA+AGG 0.547726 1_4:-35140882 Msa0161040:CDS
CAAGGAGGGTTTCGAGAAGT+CGG 0.547893 1_4:+35140595 None:intergenic
TATCAAGATGATCTGCAACC+CGG 0.548687 1_4:+35138124 None:intergenic
TGGAACAGGCCGGGCAGCGT+GGG 0.549335 1_4:-35141399 Msa0161040:CDS
AAGAAGAAGAAGAAATGGAT+GGG 0.552871 1_4:-35140476 Msa0161040:CDS
AAAGAAATTGTAATGAAATG+TGG 0.552946 1_4:-35138577 Msa0161040:CDS
GGAGGCGGCTGCTTCTGGAA+TGG 0.553100 1_4:+35139566 None:intergenic
ATCGGTGAAAAGGAGGAGAT+GGG 0.553621 1_4:-35141281 Msa0161040:CDS
AGCTAATGAAATTCCAAAGT+CGG 0.554240 1_4:+35141549 None:intergenic
AAGAAGAAGAAGAAATGGAA+GGG 0.556965 1_4:-35140128 Msa0161040:CDS
CCGACGTGTTCTTAATAAGA+AGG 0.560297 1_4:-35139301 Msa0161040:CDS
ATTGAAGAGTATGCAGTGTT+GGG 0.561354 1_4:-35141484 Msa0161040:CDS
GTGGGGACTGTTTGTAGATG+AGG 0.561917 1_4:-35137635 Msa0161040:CDS
AACCTGCAAATGCTTCCTGA+TGG 0.562051 1_4:-35137073 Msa0161040:CDS
GATTGAAGAGTATGCAGTGT+TGG 0.563372 1_4:-35141485 Msa0161040:CDS
TAAGGTATCTTGGCTTGAGA+TGG 0.563630 1_4:-35137855 Msa0161040:CDS
TCAAGTAGGTAACTTTCTCA+AGG 0.564180 1_4:-35137977 Msa0161040:CDS
CATCATCTAGTAACTGTAGC+GGG 0.564523 1_4:+35138680 None:intergenic
TAATATTTGAAACATGGATA+CGG 0.565586 1_4:+35139200 None:intergenic
TGTTTCAAATATTACGTGCA+AGG 0.565838 1_4:-35139191 Msa0161040:CDS
TAAGTTCAATGAGGCTCAGA+GGG 0.567531 1_4:+35137332 None:intergenic
TTGAAGGCAGTGACACCCAT+AGG 0.567732 1_4:+35138971 None:intergenic
CGCCGGAGCTAGTTGCAGAA+AGG 0.567739 1_4:-35138270 Msa0161040:CDS
ATCAAGCTTCTCCATTGCTA+GGG 0.568417 1_4:+35141087 None:intergenic
ATTTCCAGTTGTCTGAGACA+TGG 0.569162 1_4:+35137109 None:intergenic
GAGCAGAATTAAGTTTGCCA+AGG 0.571984 1_4:-35139757 Msa0161040:CDS
GAAATTGTAATGAAATGTGG+GGG 0.572060 1_4:-35138574 Msa0161040:CDS
AGAAAATGTGTGGTTAGAAG+AGG 0.573109 1_4:-35140939 Msa0161040:CDS
TTCTACAGTAATTTGTTCGG+CGG 0.574182 1_4:+35138906 None:intergenic
TGATTATGTACTCACAACCT+TGG 0.576633 1_4:-35138869 Msa0161040:CDS
TCTTGATATATCAGATAGGA+AGG 0.576829 1_4:-35139709 Msa0161040:CDS
GCCAATGAATCCAGTGTGGT+TGG 0.577419 1_4:-35139150 Msa0161040:CDS
CTGAAATCAAGAGATGAAGA+AGG 0.578643 1_4:-35137457 Msa0161040:CDS
CAGGTACTTTGTATGCGCCA+AGG 0.581671 1_4:+35138852 None:intergenic
GACAGGCCGATACGAGGAGG+AGG 0.582807 1_4:+35139542 None:intergenic
ATTGTTGGAATCGAAGGCAC+GGG 0.582949 1_4:-35139057 Msa0161040:CDS
CCTATCACATTCGGAACTAG+AGG 0.583383 1_4:-35137308 Msa0161040:CDS
CCCCATGACAGGCCGATACG+AGG 0.583927 1_4:+35139536 None:intergenic
TGGGTCTTCATTCGAATCCG+TGG 0.583934 1_4:+35138164 None:intergenic
TTGGAACAGGCCGGGCAGCG+TGG 0.586536 1_4:-35141400 Msa0161040:CDS
CTATTGACAAGTCTGGTACA+GGG 0.587195 1_4:+35140675 None:intergenic
CCTCGTATCGGCCTGTCATG+GGG 0.587348 1_4:-35139536 Msa0161040:CDS
TCTTTCCTTTGATACTCAAG+AGG 0.588002 1_4:-35138016 Msa0161040:CDS
AGTAAACCTGGGCATCAAGT+AGG 0.588431 1_4:-35137991 Msa0161040:CDS
GGCAATACCCGATATGTCAA+CGG 0.588465 1_4:-35138773 Msa0161040:CDS
GGAGGGAAGATCCAGAATCT+GGG 0.588757 1_4:-35139430 Msa0161040:CDS
GCCAATGGAAATCAATGCTG+AGG 0.589581 1_4:-35137005 Msa0161040:CDS
GAAGTTAACAAACATGCCAA+TGG 0.590908 1_4:-35137020 Msa0161040:CDS
GACTTCAAGTGTAAATTCCA+AGG 0.591101 1_4:+35137430 None:intergenic
AAGTAAAAGGCAGAGAGCAT+GGG 0.592015 1_4:-35139856 Msa0161040:CDS
CAAGAGATGGGAGAATTGGA+GGG 0.592630 1_4:-35139447 Msa0161040:CDS
TGCACGTAATATTTGAAACA+TGG 0.593584 1_4:+35139194 None:intergenic
TATTGACAAGTCTGGTACAG+GGG 0.593789 1_4:+35140676 None:intergenic
GAGGAGACTCCAGTGAAGGA+TGG 0.593949 1_4:-35137616 Msa0161040:CDS
ATAAGTGTGACTTACGAAGT+TGG 0.594542 1_4:-35140737 Msa0161040:CDS
AAACAACCAACCTTCTTACA+GGG 0.595683 1_4:+35138341 None:intergenic
TTTGAAACATGGATACGGCT+CGG 0.596778 1_4:+35139205 None:intergenic
CCCTTACTGAAGTTATTGCG+TGG 0.598799 1_4:-35140340 Msa0161040:CDS
TCAGCCGCCAACGTCGCCAA+CGG 0.600110 1_4:-35141523 Msa0161040:CDS
GATTGTTGGAATCGAAGGCA+CGG 0.602703 1_4:-35139058 Msa0161040:CDS
TAAAAGGCAGAGAGCATGGG+TGG 0.603846 1_4:-35139853 Msa0161040:CDS
AGAGAGCTGAGGTCGATGCA+GGG 0.603955 1_4:-35141427 Msa0161040:CDS
TGTCTGATGAACCAGACTCT+CGG 0.604078 1_4:+35138309 None:intergenic
AGTATGCAGTGTTGGGTGGT+GGG 0.604694 1_4:-35141477 Msa0161040:CDS
AGAGCAAGAGTTTAACGAGT+GGG 0.605785 1_4:-35141365 Msa0161040:CDS
TCATCCTTGTCAAGGAAAGA+CGG 0.609264 1_4:-35140874 Msa0161040:CDS
TGATCAAATCGGTGAAAAGG+AGG 0.610066 1_4:-35141288 Msa0161040:CDS
CCACGCAATAACTTCAGTAA+GGG 0.612724 1_4:+35140340 None:intergenic
AGGAGTGGTCAAGAGTGTTG+CGG 0.612995 1_4:-35138492 Msa0161040:CDS
CACTTAATAAAAGTATTGCA+CGG 0.615417 1_4:-35140169 Msa0161040:CDS
AGAAGATGACGAAATGTCGC+CGG 0.616985 1_4:-35138287 Msa0161040:CDS
GAATGATACAACCGAAAGTG+CGG 0.617176 1_4:-35139886 Msa0161040:CDS
GATACAACCGAAAGTGCGGA+AGG 0.617267 1_4:-35139882 Msa0161040:CDS
ACAGTCCCCACAGAGTTTGG+AGG 0.618023 1_4:+35137647 None:intergenic
AGAGAAGGGAAATAATAAGA+CGG 0.618300 1_4:-35140292 Msa0161040:CDS
GTTTGTTGCAGAAATTGGCA+AGG 0.622325 1_4:-35138932 Msa0161040:CDS
GAAAGTCCAATCAATCAGAA+GGG 0.622600 1_4:-35139505 Msa0161040:CDS
GAGGAAATTAAGATAGAGCG+AGG 0.623483 1_4:-35137139 Msa0161040:CDS
AAAGGAACATTGCCAGAACA+GGG 0.624981 1_4:+35140207 None:intergenic
CAAGTAGGTAACTTTCTCAA+GGG 0.628351 1_4:-35137976 Msa0161040:CDS
CAGGGATCCAAAATTCAGCT+GGG 0.628508 1_4:+35138359 None:intergenic
GAAGAGTATGCAGTGTTGGG+TGG 0.629196 1_4:-35141481 Msa0161040:CDS
GACAGGGTGAAACTGAAGCA+GGG 0.629941 1_4:+35140040 None:intergenic
AAAGACGGTCTAAAATGGGT+AGG 0.630229 1_4:-35140859 Msa0161040:CDS
GCATAAAGATGTTACACATG+AGG 0.631722 1_4:-35138512 Msa0161040:CDS
TGAAGAGGTGATTGAGATGG+TGG 0.632029 1_4:-35141032 Msa0161040:CDS
TATCTGACCTCCAAACTCTG+TGG 0.632258 1_4:-35137654 Msa0161040:CDS
GAAATCATTGTTGAACACGC+TGG 0.633697 1_4:-35139600 Msa0161040:CDS
AGAAATTGTAATGAAATGTG+GGG 0.633861 1_4:-35138575 Msa0161040:CDS
CTCAAGAGGGGAGTAAACCT+GGG 0.634667 1_4:-35138002 Msa0161040:CDS
TAGACCGTCTTTCCTTGACA+AGG 0.635721 1_4:+35140870 None:intergenic
GGACAATTAGACATGGGAGT+GGG 0.636035 1_4:-35140713 Msa0161040:CDS
ATCATGAAATCCAACCACAC+TGG 0.637876 1_4:+35139140 None:intergenic
TATCGGTAAATAAATTACAG+TGG 0.639668 1_4:+35140250 None:intergenic
AATCGTGAAATAAATTACAG+TGG 0.639668 1_4:+35140421 None:intergenic
AAAGGAACGTTCCCATGACA+GGG 0.640982 1_4:+35140378 None:intergenic
AGTTGGTGGACAATTAGACA+TGG 0.641136 1_4:-35140720 Msa0161040:CDS
AGATGTCTCTCATCCTCCTG+CGG 0.642702 1_4:+35141206 None:intergenic
AAAGGAACACTGCCAGGACA+GGG 0.642961 1_4:+35140024 None:intergenic
TGGACAATTAGACATGGGAG+TGG 0.643553 1_4:-35140714 Msa0161040:CDS
AAAACAGAGTCAATCTGCCA+CGG 0.644847 1_4:-35138181 Msa0161040:intron
AGTTGCAGAAGATCCGCAGG+AGG 0.645479 1_4:-35141219 Msa0161040:CDS
ATCAATGTCACTAAACCAAG+AGG 0.648941 1_4:-35137548 Msa0161040:CDS
TGTGTGGTTAGAAGAGGCGA+AGG 0.649197 1_4:-35140933 Msa0161040:CDS
TTTCCTTTGATACTCAAGAG+GGG 0.649463 1_4:-35138014 Msa0161040:CDS
TGCTAGGGACACAACTGAGG+TGG 0.649806 1_4:+35141102 None:intergenic
TGGTGAAGAGGTGATTGAGA+TGG 0.651527 1_4:-35141035 Msa0161040:CDS
TCATCATCTAGTAACTGTAG+CGG 0.652067 1_4:+35138679 None:intergenic
TTCATAATTGTTGATGAACG+AGG 0.653516 1_4:-35140542 Msa0161040:CDS
ACTGAGGTGGTTGTTGATGA+CGG 0.655747 1_4:+35141115 None:intergenic
CCTTCTTATTAAGAACACGT+CGG 0.655786 1_4:+35139301 None:intergenic
GTAAGTTCAATGAGGCTCAG+AGG 0.657116 1_4:+35137331 None:intergenic
CAAGTGAAAGAGAAAATGTG+TGG 0.658380 1_4:-35140949 Msa0161040:CDS
GTATTGGATTGACAAACACA+AGG 0.664258 1_4:-35141251 Msa0161040:CDS
AGTGTGACTTACGAAGTTGG+TGG 0.666364 1_4:-35140734 Msa0161040:CDS
TTCCCTTAAAACCTACTACA+GGG 0.667702 1_4:-35138052 Msa0161040:CDS
CATGACAGGCCGATACGAGG+AGG 0.673362 1_4:+35139539 None:intergenic
TCGGTGAAAAGGAGGAGATG+GGG 0.673621 1_4:-35141280 Msa0161040:CDS
GGAAGTTGCTGGTGATGCAG+AGG 0.679738 1_4:-35141329 Msa0161040:CDS
GTTCACAAGACATTTGAAGG+TGG 0.681812 1_4:-35138641 Msa0161040:CDS
CATTGCTAGGGACACAACTG+AGG 0.684689 1_4:+35141099 None:intergenic
CATGGACTGTGAATTTATGG+AGG 0.685028 1_4:-35139968 Msa0161040:CDS
GTTGGTGGACAATTAGACAT+GGG 0.685268 1_4:-35140719 Msa0161040:CDS
AAGATGTTACACATGAGGAG+TGG 0.686540 1_4:-35138507 Msa0161040:CDS
GTGATAGGGTAAGTTCAATG+AGG 0.694284 1_4:+35137323 None:intergenic
AGATGAGGAGACTCCAGTGA+AGG 0.694449 1_4:-35137620 Msa0161040:CDS
GGGAAGATCCAGAATCTGGG+TGG 0.696358 1_4:-35139427 Msa0161040:CDS
GAGTGGTCAAGAGTGTTGCG+GGG 0.697166 1_4:-35138490 Msa0161040:CDS
GTTCAAGATCAAGCACACGA+AGG 0.702064 1_4:+35137926 None:intergenic
AATGACAGCTCAACTTGACA+CGG 0.702344 1_4:-35137524 Msa0161040:CDS
ATACTTGGATACCTTGAACA+GGG 0.704377 1_4:-35138794 Msa0161040:CDS
GGAGATGCAAAAGTTAAGGG+TGG 0.708274 1_4:-35139786 Msa0161040:CDS
TCTGACCTCCAAACTCTGTG+GGG 0.708925 1_4:-35137652 Msa0161040:CDS
AGTCGGAAAGAACAATAACA+GGG 0.711678 1_4:+35140612 None:intergenic
AGAGTTGATAGATAGGAACA+TGG 0.713269 1_4:-35138239 Msa0161040:intron
AATGGATTGAAAGAGAGCTG+AGG 0.713409 1_4:-35141438 Msa0161040:CDS
AAGAGCAAGAGTTTAACGAG+TGG 0.722068 1_4:-35141366 Msa0161040:CDS
TTTACTCGCAGAGTCATACG+CGG 0.728559 1_4:-35137236 Msa0161040:CDS
CGTTGCCAATGAATCCAGTG+TGG 0.749918 1_4:-35139154 Msa0161040:CDS
TTACTCGCAGAGTCATACGC+GGG 0.760557 1_4:-35137235 Msa0161040:CDS
AAATTGTAATGAAATGTGGG+GGG 0.764259 1_4:-35138573 Msa0161040:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACTTAAACATGAAAAATAT+CGG + chr1_4:35138278-35138297 None:intergenic 15.0%
!! AAAAAACAGATGAAGTATAT+CGG - chr1_4:35137723-35137742 Msa0161040:CDS 20.0%
!! GATTACTAACAATAAAAACA+AGG + chr1_4:35137934-35137953 None:intergenic 20.0%
!! TCATCAACAATTATGAAAAT+GGG + chr1_4:35137963-35137982 None:intergenic 20.0%
!! TTCATCAACAATTATGAAAA+TGG + chr1_4:35137964-35137983 None:intergenic 20.0%
!! GTAAATTACTCAATATGAAA+AGG + chr1_4:35138505-35138524 None:intergenic 20.0%
!! TTAAAAATGTAGATGACATT+TGG + chr1_4:35139178-35139197 None:intergenic 20.0%
!!! TAATATTTGAAACATGGATA+CGG + chr1_4:35139311-35139330 None:intergenic 20.0%
!! AAAGAAATTGTAATGAAATG+TGG - chr1_4:35139931-35139950 Msa0161040:CDS 20.0%
!! AAGAAATTGTAATGAAATGT+GGG - chr1_4:35139932-35139951 Msa0161040:CDS 20.0%
!!! AAATCTTTCAAAAGTATCAT+GGG + chr1_4:35141231-35141250 None:intergenic 20.0%
!!! AAAATCTTTCAAAAGTATCA+TGG + chr1_4:35141232-35141251 None:intergenic 20.0%
!! AGAAACTTTTGTGATCAAAT+CGG - chr1_4:35137209-35137228 Msa0161040:CDS 25.0%
! ATGATATTGTGTCTAATTTG+AGG - chr1_4:35137532-35137551 Msa0161040:CDS 25.0%
!!! TTCATTTTCAGAAGCATAAT+CGG + chr1_4:35137700-35137719 None:intergenic 25.0%
! AAAAACAGATGAAGTATATC+GGG - chr1_4:35137724-35137743 Msa0161040:CDS 25.0%
! ACTAACAATAAAAACAAGGA+GGG + chr1_4:35137930-35137949 None:intergenic 25.0%
! TACTAACAATAAAAACAAGG+AGG + chr1_4:35137931-35137950 None:intergenic 25.0%
! AATCGTGAAATAAATTACAG+TGG + chr1_4:35138090-35138109 None:intergenic 25.0%
! TATCGGTAAATAAATTACAG+TGG + chr1_4:35138261-35138280 None:intergenic 25.0%
!!! CACTTAATAAAAGTATTGCA+CGG - chr1_4:35138339-35138358 Msa0161040:CDS 25.0%
!! AACTTAGAGCGTTAAAAAAA+AGG + chr1_4:35138433-35138452 None:intergenic 25.0%
! TACTTTATGAAGTTATTGCA+TGG - chr1_4:35138522-35138541 Msa0161040:CDS 25.0%
! TTCTGTACACTTCAAATTAT+TGG + chr1_4:35138573-35138592 None:intergenic 25.0%
! AATGGTGAATTTCTTATTGA+TGG - chr1_4:35138701-35138720 Msa0161040:CDS 25.0%
! AGATTCTTGATATATCAGAT+AGG - chr1_4:35138795-35138814 Msa0161040:CDS 25.0%
! AACATTTCCAATGCAATAAA+TGG + chr1_4:35138825-35138844 None:intergenic 25.0%
!!! TCATCTACATTTTTAAGTAC+TGG - chr1_4:35139182-35139201 Msa0161040:CDS 25.0%
!!! TTCTTCTACAGTAATTTGTT+CGG + chr1_4:35139608-35139627 None:intergenic 25.0%
! AGAAATTGTAATGAAATGTG+GGG - chr1_4:35139933-35139952 Msa0161040:CDS 25.0%
!! CTCATTTTCAATATTTGTGA+TGG + chr1_4:35139964-35139983 None:intergenic 25.0%
! ATGAAGATCAAATACAAAGT+TGG - chr1_4:35140052-35140071 Msa0161040:CDS 25.0%
! ATCTTGATAAAGATGATATC+TGG - chr1_4:35140398-35140417 Msa0161040:CDS 25.0%
! ATTGGTCAATATCACAAAAT+TGG - chr1_4:35140924-35140943 Msa0161040:CDS 25.0%
! TTGGTCAATATCACAAAATT+GGG - chr1_4:35140925-35140944 Msa0161040:CDS 25.0%
!! AGCTTCATGTCTTAAAATTT+TGG - chr1_4:35141331-35141350 Msa0161040:CDS 25.0%
AGCTAATGAAATTCCAAAGT+CGG + chr1_4:35136962-35136981 None:intergenic 30.0%
! ATACTCTTCAATCAGGATTT+TGG + chr1_4:35137016-35137035 None:intergenic 30.0%
AGTCAAACTACTATAGTTAC+TGG - chr1_4:35137453-35137472 Msa0161040:CDS 30.0%
! TAGACACAATATCATTTTGC+AGG + chr1_4:35137527-35137546 None:intergenic 30.0%
!! AATTATACTGAAAGTGTTGC+AGG - chr1_4:35137606-35137625 Msa0161040:CDS 30.0%
AAACAAAAAGGAATAGGATG+TGG + chr1_4:35137875-35137894 None:intergenic 30.0%
! TTCATAATTGTTGATGAACG+AGG - chr1_4:35137966-35137985 Msa0161040:CDS 30.0%
AGAAGAAGAAGAAGAAGAAA+TGG - chr1_4:35138027-35138046 Msa0161040:CDS 30.0%
AAGAAGAAGAAGAAATGGAT+GGG - chr1_4:35138032-35138051 Msa0161040:CDS 30.0%
AGAGAAGGGAAATAATAAGA+CGG - chr1_4:35138216-35138235 Msa0161040:intron 30.0%
! GCAATGTTCCTTTTCATATT+GGG - chr1_4:35138311-35138330 Msa0161040:CDS 30.0%
GTGAATAACCCAATATGAAA+AGG + chr1_4:35138322-35138341 None:intergenic 30.0%
AGAAGAAGAAGAAGAAGAAA+TGG - chr1_4:35138027-35138046 Msa0161040:CDS 30.0%
AAGAAGAAGAAGAAATGGAA+GGG - chr1_4:35138380-35138399 Msa0161040:CDS 30.0%
TCTTGATATATCAGATAGGA+AGG - chr1_4:35138799-35138818 Msa0161040:CDS 30.0%
AATGACAGATTGAACTTCAA+GGG + chr1_4:35139125-35139144 None:intergenic 30.0%
TAATGACAGATTGAACTTCA+AGG + chr1_4:35139126-35139145 None:intergenic 30.0%
GTTCTTAATAAGAAGGTAGA+TGG - chr1_4:35139214-35139233 Msa0161040:CDS 30.0%
ACAAAATTGAAGAAGCTTCT+AGG - chr1_4:35139245-35139264 Msa0161040:CDS 30.0%
! TGCACGTAATATTTGAAACA+TGG + chr1_4:35139317-35139336 None:intergenic 30.0%
TGTTTCAAATATTACGTGCA+AGG - chr1_4:35139317-35139336 Msa0161040:CDS 30.0%
AAGTACCTGTTAATTGTTGA+TGG - chr1_4:35139670-35139689 Msa0161040:CDS 30.0%
TTATGCCATCAACAATTAAC+AGG + chr1_4:35139678-35139697 None:intergenic 30.0%
AGAAACTTCTCAAGTATACT+TGG - chr1_4:35139699-35139718 Msa0161040:CDS 30.0%
TACTAGATGATGAAACTAGT+TGG - chr1_4:35139839-35139858 Msa0161040:CDS 30.0%
!!! ATAAGTTTTGTTTCTGACTC+GGG + chr1_4:35139901-35139920 None:intergenic 30.0%
!!! GATAAGTTTTGTTTCTGACT+CGG + chr1_4:35139902-35139921 None:intergenic 30.0%
GTCAGAAACAAAACTTATCA+AGG - chr1_4:35139903-35139922 Msa0161040:CDS 30.0%
GAAACAAAACTTATCAAGGT+TGG - chr1_4:35139907-35139926 Msa0161040:CDS 30.0%
GAAATTGTAATGAAATGTGG+GGG - chr1_4:35139934-35139953 Msa0161040:CDS 30.0%
AAATTGTAATGAAATGTGGG+GGG - chr1_4:35139935-35139954 Msa0161040:CDS 30.0%
TTGAGTATCAAAGGAAAGAA+AGG + chr1_4:35140491-35140510 None:intergenic 30.0%
! AACAACTTGCTTATAGATGA+TGG + chr1_4:35140697-35140716 None:intergenic 30.0%
! TCAGATAGAGAATTACCTTT+TGG + chr1_4:35140841-35140860 None:intergenic 30.0%
GAGATTTATGTTATTCTCCA+AGG + chr1_4:35141103-35141122 None:intergenic 30.0%
!!! AATTTTAAGACATGAAGCTG+AGG + chr1_4:35141330-35141349 None:intergenic 30.0%
!! TCTTAAAATTTTGGAAGCTG+TGG - chr1_4:35141340-35141359 Msa0161040:CDS 30.0%
! ATTGAAGAGTATGCAGTGTT+GGG - chr1_4:35137024-35137043 Msa0161040:CDS 35.0%
TTGTGATCAAATCGGTGAAA+AGG - chr1_4:35137217-35137236 Msa0161040:CDS 35.0%
GTATTGGATTGACAAACACA+AGG - chr1_4:35137257-35137276 Msa0161040:CDS 35.0%
TACTATAGTTACTGGTGAAG+AGG - chr1_4:35137461-35137480 Msa0161040:CDS 35.0%
! ACACAATATCATTTTGCAGG+CGG + chr1_4:35137524-35137543 None:intergenic 35.0%
CAAGTGAAAGAGAAAATGTG+TGG - chr1_4:35137559-35137578 Msa0161040:CDS 35.0%
AGAAAATGTGTGGTTAGAAG+AGG - chr1_4:35137569-35137588 Msa0161040:CDS 35.0%
AGGTAATTTCATCCTTGTCA+AGG - chr1_4:35137626-35137645 Msa0161040:CDS 35.0%
! AAGGAAAGACGGTCTAAAAT+GGG - chr1_4:35137645-35137664 Msa0161040:CDS 35.0%
CATAATCGGCTGAAAGATAA+AGG + chr1_4:35137686-35137705 None:intergenic 35.0%
ATAAGTGTGACTTACGAAGT+TGG - chr1_4:35137771-35137790 Msa0161040:CDS 35.0%
CAATAACAGGGCAAACAAAA+AGG + chr1_4:35137887-35137906 None:intergenic 35.0%
AGTCGGAAAGAACAATAACA+GGG + chr1_4:35137899-35137918 None:intergenic 35.0%
AAGTCGGAAAGAACAATAAC+AGG + chr1_4:35137900-35137919 None:intergenic 35.0%
CTTCTTCAACATCATCATAC+TGG + chr1_4:35138009-35138028 None:intergenic 35.0%
GAAGAAGAAGAAGAAATGGA+TGG - chr1_4:35138031-35138050 Msa0161040:CDS 35.0%
TTTCAGATTTACCCTGTCAT+GGG - chr1_4:35138119-35138138 Msa0161040:CDS 35.0%
GGGAAAAACTCAAGATGAAA+AGG + chr1_4:35138151-35138170 None:intergenic 35.0%
GTCTAAAGAAGAAGAAGAGA+TGG - chr1_4:35138192-35138211 Msa0161040:intron 35.0%
! GGCAATGTTCCTTTTCATAT+TGG - chr1_4:35138310-35138329 Msa0161040:CDS 35.0%
GAAGAAGAAGAAGAAATGGA+AGG - chr1_4:35138031-35138050 Msa0161040:CDS 35.0%
! TTGCATGGACTGTGAATTTA+TGG - chr1_4:35138537-35138556 Msa0161040:CDS 35.0%
TGATGGAGATGCAAAAGTTA+AGG - chr1_4:35138718-35138737 Msa0161040:CDS 35.0%
GATGGAGATGCAAAAGTTAA+GGG - chr1_4:35138719-35138738 Msa0161040:CDS 35.0%
! CAACAAACAGTTGATATCCT+TGG + chr1_4:35138771-35138790 None:intergenic 35.0%
ACAAGAGCTTGTACCTTTAT+TGG - chr1_4:35138856-35138875 Msa0161040:CDS 35.0%
CAAGAGCTTGTACCTTTATT+GGG - chr1_4:35138857-35138876 Msa0161040:CDS 35.0%
TTGTACCTTTATTGGGCAAT+GGG - chr1_4:35138864-35138883 Msa0161040:CDS 35.0%
AGAAAGTCCAATCAATCAGA+AGG - chr1_4:35139002-35139021 Msa0161040:CDS 35.0%
GAAAGTCCAATCAATCAGAA+GGG - chr1_4:35139003-35139022 Msa0161040:CDS 35.0%
! ATTTGGCTTATGCTTCAGTT+TGG + chr1_4:35139161-35139180 None:intergenic 35.0%
CTTCTTATTAAGAACACGTC+GGG + chr1_4:35139209-35139228 None:intergenic 35.0%
CCTTCTTATTAAGAACACGT+CGG + chr1_4:35139210-35139229 None:intergenic 35.0%
! GAGAAGAAAAGCATATCGTT+TGG - chr1_4:35139267-35139286 Msa0161040:CDS 35.0%
! TGGTTTGTCGTACAATTTGA+AGG + chr1_4:35139556-35139575 None:intergenic 35.0%
!! AACCAGTTTGTTGCAGAAAT+TGG - chr1_4:35139571-35139590 Msa0161040:CDS 35.0%
!! TTCTACAGTAATTTGTTCGG+CGG + chr1_4:35139605-35139624 None:intergenic 35.0%
TGATTATGTACTCACAACCT+TGG - chr1_4:35139639-35139658 Msa0161040:CDS 35.0%
TATACTTGGATACCTTGAAC+AGG - chr1_4:35139713-35139732 Msa0161040:CDS 35.0%
ATACTTGGATACCTTGAACA+GGG - chr1_4:35139714-35139733 Msa0161040:CDS 35.0%
TCATCATCTAGTAACTGTAG+CGG + chr1_4:35139832-35139851 None:intergenic 35.0%
GTTGTTCACAAGACATTTGA+AGG - chr1_4:35139864-35139883 Msa0161040:CDS 35.0%
!!! TAAGTTTTGTTTCTGACTCG+GGG + chr1_4:35139900-35139919 None:intergenic 35.0%
GCATAAAGATGTTACACATG+AGG - chr1_4:35139996-35140015 Msa0161040:CDS 35.0%
! GATCAAATACAAAGTTGGTC+TGG - chr1_4:35140057-35140076 Msa0161040:CDS 35.0%
AGACATCTTCTCAGATAAGA+AGG + chr1_4:35140111-35140130 None:intergenic 35.0%
! TGATATTCCCAGCTGAATTT+TGG - chr1_4:35140142-35140161 Msa0161040:CDS 35.0%
! AATTTTGGATCCCTGTAAGA+AGG - chr1_4:35140157-35140176 Msa0161040:CDS 35.0%
AAACAACCAACCTTCTTACA+GGG + chr1_4:35140170-35140189 None:intergenic 35.0%
AAAACAACCAACCTTCTTAC+AGG + chr1_4:35140171-35140190 None:intergenic 35.0%
!! TAAGAAGGTTGGTTGTTTTG+TGG - chr1_4:35140172-35140191 Msa0161040:CDS 35.0%
!! AAGAAGGTTGGTTGTTTTGT+GGG - chr1_4:35140173-35140192 Msa0161040:CDS 35.0%
!! ACTTGACAGAGTTGATAGAT+AGG - chr1_4:35140262-35140281 Msa0161040:CDS 35.0%
!! AGAGTTGATAGATAGGAACA+TGG - chr1_4:35140269-35140288 Msa0161040:CDS 35.0%
! ATCTGGAATGATCACATTCA+TGG - chr1_4:35140415-35140434 Msa0161040:CDS 35.0%
TTCCCTTAAAACCTACTACA+GGG - chr1_4:35140456-35140475 Msa0161040:CDS 35.0%
TCTTTCCTTTGATACTCAAG+AGG - chr1_4:35140492-35140511 Msa0161040:CDS 35.0%
CTTTCCTTTGATACTCAAGA+GGG - chr1_4:35140493-35140512 Msa0161040:CDS 35.0%
TTTCCTTTGATACTCAAGAG+GGG - chr1_4:35140494-35140513 Msa0161040:CDS 35.0%
TCAAGTAGGTAACTTTCTCA+AGG - chr1_4:35140531-35140550 Msa0161040:CDS 35.0%
CAAGTAGGTAACTTTCTCAA+GGG - chr1_4:35140532-35140551 Msa0161040:CDS 35.0%
ATACTCTACCTAGCTCAATA+TGG - chr1_4:35140755-35140774 Msa0161040:CDS 35.0%
!! AGAGAATTACCTTTTGGTTG+AGG + chr1_4:35140835-35140854 None:intergenic 35.0%
CTTGGTTTAGTGACATTGAT+TGG + chr1_4:35140960-35140979 None:intergenic 35.0%
ATCAATGTCACTAAACCAAG+AGG - chr1_4:35140960-35140979 Msa0161040:CDS 35.0%
CTGAAATCAAGAGATGAAGA+AGG - chr1_4:35141051-35141070 Msa0161040:CDS 35.0%
GACTTCAAGTGTAAATTCCA+AGG + chr1_4:35141081-35141100 None:intergenic 35.0%
GAATTTACACTTGAAGTCCT+TGG - chr1_4:35141083-35141102 Msa0161040:CDS 35.0%
TCTCACTGACATGTATTTAC+TGG - chr1_4:35141119-35141138 Msa0161040:CDS 35.0%
CTCACTGACATGTATTTACT+GGG - chr1_4:35141120-35141139 Msa0161040:CDS 35.0%
TGAACTTACCCTATCACATT+CGG - chr1_4:35141191-35141210 Msa0161040:CDS 35.0%
!! ATTTTGGAAGCTGTGGTATT+TGG - chr1_4:35141347-35141366 Msa0161040:CDS 35.0%
GAAGTTAACAAACATGCCAA+TGG - chr1_4:35141488-35141507 Msa0161040:CDS 35.0%
ACACTGCATACTCTTCAATC+AGG + chr1_4:35137023-35137042 None:intergenic 40.0%
! GATTGAAGAGTATGCAGTGT+TGG - chr1_4:35137023-35137042 Msa0161040:CDS 40.0%
!! AATGGATTGAAAGAGAGCTG+AGG - chr1_4:35137070-35137089 Msa0161040:CDS 40.0%
AAGAGCAAGAGTTTAACGAG+TGG - chr1_4:35137142-35137161 Msa0161040:CDS 40.0%
AGAGCAAGAGTTTAACGAGT+GGG - chr1_4:35137143-35137162 Msa0161040:CDS 40.0%
TGATCAAATCGGTGAAAAGG+AGG - chr1_4:35137220-35137239 Msa0161040:CDS 40.0%
TGGATTGACAAACACAAGGT+TGG - chr1_4:35137261-35137280 Msa0161040:CDS 40.0%
GGATTGACAAACACAAGGTT+GGG - chr1_4:35137262-35137281 Msa0161040:CDS 40.0%
ATCAAGCTTCTCCATTGCTA+GGG + chr1_4:35137424-35137443 None:intergenic 40.0%
! CACAATATCATTTTGCAGGC+GGG + chr1_4:35137523-35137542 None:intergenic 40.0%
TCATCCTTGTCAAGGAAAGA+CGG - chr1_4:35137634-35137653 Msa0161040:CDS 40.0%
CAAGGAAAGACGGTCTAAAA+TGG - chr1_4:35137644-35137663 Msa0161040:CDS 40.0%
! AAAGACGGTCTAAAATGGGT+AGG - chr1_4:35137649-35137668 Msa0161040:CDS 40.0%
AAGTATATCGGGACTCGAAT+TGG - chr1_4:35137735-35137754 Msa0161040:CDS 40.0%
!! AGTTGGTGGACAATTAGACA+TGG - chr1_4:35137788-35137807 Msa0161040:CDS 40.0%
! GTTGGTGGACAATTAGACAT+GGG - chr1_4:35137789-35137808 Msa0161040:CDS 40.0%
TATTGACAAGTCTGGTACAG+GGG + chr1_4:35137835-35137854 None:intergenic 40.0%
CTATTGACAAGTCTGGTACA+GGG + chr1_4:35137836-35137855 None:intergenic 40.0%
TCTATTGACAAGTCTGGTAC+AGG + chr1_4:35137837-35137856 None:intergenic 40.0%
AAGCTCTCTATTGACAAGTC+TGG + chr1_4:35137843-35137862 None:intergenic 40.0%
CAGGGCAAACAAAAAGGAAT+AGG + chr1_4:35137881-35137900 None:intergenic 40.0%
AGAAGAAGAAATGGATGGGA+AGG - chr1_4:35138036-35138055 Msa0161040:CDS 40.0%
! TGACAGGGTAAATCTGAAAC+AGG + chr1_4:35138118-35138137 None:intergenic 40.0%
GTTTCAGATTTACCCTGTCA+TGG - chr1_4:35138118-35138137 Msa0161040:CDS 40.0%
CCACGCAATAACTTCAGTAA+GGG + chr1_4:35138171-35138190 None:intergenic 40.0%
TCCACGCAATAACTTCAGTA+AGG + chr1_4:35138172-35138191 None:intergenic 40.0%
AGAAGAAGAGATGGAAGAGA+AGG - chr1_4:35138201-35138220 Msa0161040:intron 40.0%
GAAGAAGAGATGGAAGAGAA+GGG - chr1_4:35138202-35138221 Msa0161040:intron 40.0%
! GTTTAAGTTTCACCCTGTTC+TGG - chr1_4:35138289-35138308 Msa0161040:CDS 40.0%
AAAGGAACATTGCCAGAACA+GGG + chr1_4:35138304-35138323 None:intergenic 40.0%
AAAAGGAACATTGCCAGAAC+AGG + chr1_4:35138305-35138324 None:intergenic 40.0%
GAAGAAGAAATGGAAGGGAA+TGG - chr1_4:35138385-35138404 Msa0161040:CDS 40.0%
! AGAGCGTTAAAAAAAAGGCG+CGG + chr1_4:35138428-35138447 None:intergenic 40.0%
ATATGAAAAGGAACACTGCC+AGG + chr1_4:35138493-35138512 None:intergenic 40.0%
! CATGGACTGTGAATTTATGG+AGG - chr1_4:35138540-35138559 Msa0161040:CDS 40.0%
GAATGATACAACCGAAAGTG+CGG - chr1_4:35138622-35138641 Msa0161040:CDS 40.0%
! ATGCTCTCTGCCTTTTACTT+AGG + chr1_4:35138652-35138671 None:intergenic 40.0%
TAAGTAAAAGGCAGAGAGCA+TGG - chr1_4:35138651-35138670 Msa0161040:CDS 40.0%
! AAGTAAAAGGCAGAGAGCAT+GGG - chr1_4:35138652-35138671 Msa0161040:CDS 40.0%
GAGCAGAATTAAGTTTGCCA+AGG - chr1_4:35138751-35138770 Msa0161040:CDS 40.0%
AGGAAGGCCATTTATTGCAT+TGG - chr1_4:35138815-35138834 Msa0161040:CDS 40.0%
CTTGTACCTTTATTGGGCAA+TGG - chr1_4:35138863-35138882 Msa0161040:CDS 40.0%
GAAATCATTGTTGAACACGC+TGG - chr1_4:35138908-35138927 Msa0161040:CDS 40.0%
! CCTTTTCCCTTCTGATTGAT+TGG + chr1_4:35139012-35139031 None:intergenic 40.0%
CCAATCAATCAGAAGGGAAA+AGG - chr1_4:35139009-35139028 Msa0161040:CDS 40.0%
CAGAAGGGAAAAGGAATTGA+TGG - chr1_4:35139018-35139037 Msa0161040:CDS 40.0%
CCGACGTGTTCTTAATAAGA+AGG - chr1_4:35139207-35139226 Msa0161040:CDS 40.0%
! TTTGAAACATGGATACGGCT+CGG + chr1_4:35139306-35139325 None:intergenic 40.0%
ATCATGAAATCCAACCACAC+TGG + chr1_4:35139371-35139390 None:intergenic 40.0%
ACTTGGATTGTTGGAATCGA+AGG - chr1_4:35139445-35139464 Msa0161040:CDS 40.0%
TAAGACAGCACTAGCAAAGT+TGG - chr1_4:35139474-35139493 Msa0161040:CDS 40.0%
! TCATTTTCAGCATCGCCTAT+GGG - chr1_4:35139522-35139541 Msa0161040:CDS 40.0%
TGCCAATTTCTGCAACAAAC+TGG + chr1_4:35139576-35139595 None:intergenic 40.0%
! GTTTGTTGCAGAAATTGGCA+AGG - chr1_4:35139576-35139595 Msa0161040:CDS 40.0%
CATCATCTAGTAACTGTAGC+GGG + chr1_4:35139831-35139850 None:intergenic 40.0%
GTTCACAAGACATTTGAAGG+TGG - chr1_4:35139867-35139886 Msa0161040:CDS 40.0%
AAGATGTTACACATGAGGAG+TGG - chr1_4:35140001-35140020 Msa0161040:CDS 40.0%
AAAACAGAGTCAATCTGCCA+CGG - chr1_4:35140327-35140346 Msa0161040:CDS 40.0%
!! GGCGAATAATGGACTTCTTT+GGG + chr1_4:35140366-35140385 None:intergenic 40.0%
CAAAGAAGTCCATTATTCGC+CGG - chr1_4:35140365-35140384 Msa0161040:CDS 40.0%
AAAGAAGTCCATTATTCGCC+GGG - chr1_4:35140366-35140385 Msa0161040:CDS 40.0%
TATCAAGATGATCTGCAACC+CGG + chr1_4:35140387-35140406 None:intergenic 40.0%
CTTCCCTTAAAACCTACTAC+AGG - chr1_4:35140455-35140474 Msa0161040:CDS 40.0%
!! GTCCCTGTAGTAGGTTTTAA+GGG + chr1_4:35140461-35140480 None:intergenic 40.0%
! GAAAGTCTTGCTATGCGATT+AGG + chr1_4:35140628-35140647 None:intergenic 40.0%
ATCGCATAGCAAGACTTTCA+CGG - chr1_4:35140629-35140648 Msa0161040:CDS 40.0%
! TAAGGTATCTTGGCTTGAGA+TGG - chr1_4:35140653-35140672 Msa0161040:CDS 40.0%
ACCTAGCTCAATATGGAAGA+TGG - chr1_4:35140762-35140781 Msa0161040:CDS 40.0%
TCCATCTTCCATATTGAGCT+AGG + chr1_4:35140766-35140785 None:intergenic 40.0%
AGATTTCCACCTCAACCAAA+AGG - chr1_4:35140823-35140842 Msa0161040:CDS 40.0%
!! GAATTACCTTTTGGTTGAGG+TGG + chr1_4:35140832-35140851 None:intergenic 40.0%
AATGACAGCTCAACTTGACA+CGG - chr1_4:35140984-35141003 Msa0161040:CDS 40.0%
ATTTCAGTCTCAGCGATTGA+AGG + chr1_4:35141038-35141057 None:intergenic 40.0%
TAAGTTCAATGAGGCTCAGA+GGG + chr1_4:35141179-35141198 None:intergenic 40.0%
GTGATAGGGTAAGTTCAATG+AGG + chr1_4:35141188-35141207 None:intergenic 40.0%
! CTCTAGTTCCGAATGTGATA+GGG + chr1_4:35141202-35141221 None:intergenic 40.0%
AAACACAGTGTTCGAAGATG+TGG + chr1_4:35141255-35141274 None:intergenic 40.0%
GAGGAAATTAAGATAGAGCG+AGG - chr1_4:35141369-35141388 Msa0161040:CDS 40.0%
! TTTCCAGTTGTCTGAGACAT+GGG + chr1_4:35141401-35141420 None:intergenic 40.0%
! ATTTCCAGTTGTCTGAGACA+TGG + chr1_4:35141402-35141421 None:intergenic 40.0%
TTGACATGCTTTAGTCCATC+AGG + chr1_4:35141453-35141472 None:intergenic 40.0%
AGTTTGGACGACTTGACAAT+TGG + chr1_4:35141544-35141563 None:intergenic 40.0%
! CAGGATTTTGGATAGACCGT+TGG + chr1_4:35137004-35137023 None:intergenic 45.0%
GGACAATTAGGCACGTAGAA+TGG - chr1_4:35137052-35137071 Msa0161040:CDS 45.0%
GAGAAGTTGAAGGAAGTTGC+TGG - chr1_4:35137168-35137187 Msa0161040:CDS 45.0%
AATCGGTGAAAAGGAGGAGA+TGG - chr1_4:35137226-35137245 Msa0161040:CDS 45.0%
ATCGGTGAAAAGGAGGAGAT+GGG - chr1_4:35137227-35137246 Msa0161040:CDS 45.0%
ATGAGAGACATCTCTCAGAC+TGG - chr1_4:35137312-35137331 Msa0161040:CDS 45.0%
AGTGTCTCTGTTGAAACTCC+AGG - chr1_4:35137360-35137379 Msa0161040:CDS 45.0%
! ACTGAGGTGGTTGTTGATGA+CGG + chr1_4:35137396-35137415 None:intergenic 45.0%
GATCAAGCTTCTCCATTGCT+AGG + chr1_4:35137425-35137444 None:intergenic 45.0%
TGGTGAAGAGGTGATTGAGA+TGG - chr1_4:35137473-35137492 Msa0161040:CDS 45.0%
TGAAGAGGTGATTGAGATGG+TGG - chr1_4:35137476-35137495 Msa0161040:CDS 45.0%
TAGACCGTCTTTCCTTGACA+AGG + chr1_4:35137641-35137660 None:intergenic 45.0%
AGTGTGACTTACGAAGTTGG+TGG - chr1_4:35137774-35137793 Msa0161040:CDS 45.0%
TGGACAATTAGACATGGGAG+TGG - chr1_4:35137794-35137813 Msa0161040:CDS 45.0%
GGACAATTAGACATGGGAGT+GGG - chr1_4:35137795-35137814 Msa0161040:CDS 45.0%
AAAGGAACGTTCCCATGACA+GGG + chr1_4:35138133-35138152 None:intergenic 45.0%
AAAAGGAACGTTCCCATGAC+AGG + chr1_4:35138134-35138153 None:intergenic 45.0%
CCCTTACTGAAGTTATTGCG+TGG - chr1_4:35138168-35138187 Msa0161040:CDS 45.0%
CTGAGAGTCGTGTCTCAAAA+TGG - chr1_4:35138683-35138702 Msa0161040:CDS 45.0%
GGAGATGCAAAAGTTAAGGG+TGG - chr1_4:35138722-35138741 Msa0161040:CDS 45.0%
GTATGCCCATTGCCCAATAA+AGG + chr1_4:35138872-35138891 None:intergenic 45.0%
CTTCTGGATGCACAAGAGAT+GGG - chr1_4:35139049-35139068 Msa0161040:CDS 45.0%
TGCACAAGAGATGGGAGAAT+TGG - chr1_4:35139057-35139076 Msa0161040:CDS 45.0%
ACAAGAGATGGGAGAATTGG+AGG - chr1_4:35139060-35139079 Msa0161040:CDS 45.0%
CAAGAGATGGGAGAATTGGA+GGG - chr1_4:35139061-35139080 Msa0161040:CDS 45.0%
TCCAACCACACTGGATTCAT+TGG + chr1_4:35139362-35139381 None:intergenic 45.0%
! TGATGACAGACAAGCTCTGA+TGG - chr1_4:35139387-35139406 Msa0161040:CDS 45.0%
AGAAACGTCGCTGCATTACT+TGG - chr1_4:35139428-35139447 Msa0161040:CDS 45.0%
CGCTGCATTACTTGGATTGT+TGG - chr1_4:35139436-35139455 Msa0161040:CDS 45.0%
GATTGTTGGAATCGAAGGCA+CGG - chr1_4:35139450-35139469 Msa0161040:CDS 45.0%
! ATTGTTGGAATCGAAGGCAC+GGG - chr1_4:35139451-35139470 Msa0161040:CDS 45.0%
! CTCATTTTCAGCATCGCCTA+TGG - chr1_4:35139521-35139540 Msa0161040:CDS 45.0%
GGCAATACCCGATATGTCAA+CGG - chr1_4:35139735-35139754 Msa0161040:CDS 45.0%
GCAATACCCGATATGTCAAC+GGG - chr1_4:35139736-35139755 Msa0161040:CDS 45.0%
TCTGCTTCCCGTTGACATAT+CGG + chr1_4:35139746-35139765 None:intergenic 45.0%
CAGGGATCCAAAATTCAGCT+GGG + chr1_4:35140152-35140171 None:intergenic 45.0%
ACAGGGATCCAAAATTCAGC+TGG + chr1_4:35140153-35140172 None:intergenic 45.0%
TTGGATCCCTGTAAGAAGGT+TGG - chr1_4:35140161-35140180 Msa0161040:CDS 45.0%
TGTCTGATGAACCAGACTCT+CGG + chr1_4:35140202-35140221 None:intergenic 45.0%
AGAAGATGACGAAATGTCGC+CGG - chr1_4:35140221-35140240 Msa0161040:CDS 45.0%
TACCTTTCTGCAACTAGCTC+CGG + chr1_4:35140243-35140262 None:intergenic 45.0%
TGCGCTTTCTCTTGGAAACT+TGG + chr1_4:35140296-35140315 None:intergenic 45.0%
! GTTTCCAAGAGAAAGCGCAA+TGG - chr1_4:35140297-35140316 Msa0161040:CDS 45.0%
CTTTCCATTGCGCTTTCTCT+TGG + chr1_4:35140304-35140323 None:intergenic 45.0%
! CAAGAGAAAGCGCAATGGAA+AGG - chr1_4:35140302-35140321 Msa0161040:CDS 45.0%
!! CGGCGAATAATGGACTTCTT+TGG + chr1_4:35140367-35140386 None:intergenic 45.0%
! CGTCCCTGTAGTAGGTTTTA+AGG + chr1_4:35140462-35140481 None:intergenic 45.0%
ACTCCCCTCTTGAGTATCAA+AGG + chr1_4:35140500-35140519 None:intergenic 45.0%
AGTAAACCTGGGCATCAAGT+AGG - chr1_4:35140517-35140536 Msa0161040:CDS 45.0%
AAGTTACCTACTTGATGCCC+AGG + chr1_4:35140526-35140545 None:intergenic 45.0%
GTTCAAGATCAAGCACACGA+AGG + chr1_4:35140585-35140604 None:intergenic 45.0%
GCTATGCGATTAGGCAACTT+GGG + chr1_4:35140619-35140638 None:intergenic 45.0%
TGCTATGCGATTAGGCAACT+TGG + chr1_4:35140620-35140639 None:intergenic 45.0%
TAGCAAGACTTTCACGGCTA+AGG - chr1_4:35140635-35140654 Msa0161040:CDS 45.0%
! CTTTCACGGCTAAGGTATCT+TGG - chr1_4:35140643-35140662 Msa0161040:CDS 45.0%
GTTGAGGTGGAAATCTGCTT+CGG + chr1_4:35140819-35140838 None:intergenic 45.0%
TATCTGACCTCCAAACTCTG+TGG - chr1_4:35140854-35140873 Msa0161040:CDS 45.0%
ATCTGACCTCCAAACTCTGT+GGG - chr1_4:35140855-35140874 Msa0161040:CDS 45.0%
GTAAGTTCAATGAGGCTCAG+AGG + chr1_4:35141180-35141199 None:intergenic 45.0%
! CCTCTAGTTCCGAATGTGAT+AGG + chr1_4:35141203-35141222 None:intergenic 45.0%
CCTATCACATTCGGAACTAG+AGG - chr1_4:35141200-35141219 Msa0161040:CDS 45.0%
TTTACTCGCAGAGTCATACG+CGG - chr1_4:35141272-35141291 Msa0161040:CDS 45.0%
TTGGAAGCTGTGGTATTTGG+AGG - chr1_4:35141350-35141369 Msa0161040:CDS 45.0%
!! TCAGGAAGCATTTGCAGGTT+CGG + chr1_4:35141435-35141454 None:intergenic 45.0%
AACCTGCAAATGCTTCCTGA+TGG - chr1_4:35141435-35141454 Msa0161040:CDS 45.0%
GCCAATGGAAATCAATGCTG+AGG - chr1_4:35141503-35141522 Msa0161040:CDS 45.0%
!! GCCTCAGCATTGATTTCCAT+TGG + chr1_4:35141507-35141526 None:intergenic 45.0%
GGACGACTTGACAATTGGTT+GGG + chr1_4:35141539-35141558 None:intergenic 45.0%
TGGACGACTTGACAATTGGT+TGG + chr1_4:35141540-35141559 None:intergenic 45.0%
! GAAGAGTATGCAGTGTTGGG+TGG - chr1_4:35137027-35137046 Msa0161040:CDS 50.0%
! AGTATGCAGTGTTGGGTGGT+GGG - chr1_4:35137031-35137050 Msa0161040:CDS 50.0%
!! TGTTGGGTGGTGGGACAATT+AGG - chr1_4:35137040-35137059 Msa0161040:CDS 50.0%
GATGCAGGGATTGTTGGAAC+AGG - chr1_4:35137095-35137114 Msa0161040:CDS 50.0%
CGAGTGGGAAGAGAAGTTGA+AGG - chr1_4:35137158-35137177 Msa0161040:CDS 50.0%
TCGGTGAAAAGGAGGAGATG+GGG - chr1_4:35137228-35137247 Msa0161040:CDS 50.0%
GGAGATGGGGAGTTCTGTAT+TGG - chr1_4:35137241-35137260 Msa0161040:CDS 50.0%
AAGAGTTGCAGAAGATCCGC+AGG - chr1_4:35137286-35137305 Msa0161040:CDS 50.0%
AGATGTCTCTCATCCTCCTG+CGG + chr1_4:35137305-35137324 None:intergenic 50.0%
CATTGCTAGGGACACAACTG+AGG + chr1_4:35137412-35137431 None:intergenic 50.0%
CTCAGTTGTGTCCCTAGCAA+TGG - chr1_4:35137410-35137429 Msa0161040:CDS 50.0%
!! GAGATGGTGGAACGAGTAAG+AGG - chr1_4:35137489-35137508 Msa0161040:CDS 50.0%
TGTGTGGTTAGAAGAGGCGA+AGG - chr1_4:35137575-35137594 Msa0161040:CDS 50.0%
CAAGGAGGGTTTCGAGAAGT+CGG + chr1_4:35137916-35137935 None:intergenic 50.0%
GACAGGGTGAAACTGAAGCA+GGG + chr1_4:35138471-35138490 None:intergenic 50.0%
AAAGGAACACTGCCAGGACA+GGG + chr1_4:35138487-35138506 None:intergenic 50.0%
AAAAGGAACACTGCCAGGAC+AGG + chr1_4:35138488-35138507 None:intergenic 50.0%
! GATACAACCGAAAGTGCGGA+AGG - chr1_4:35138626-35138645 Msa0161040:CDS 50.0%
ACTTAGGCCTTCCGCACTTT+CGG + chr1_4:35138636-35138655 None:intergenic 50.0%
GTGCGGAAGGCCTAAGTAAA+AGG - chr1_4:35138639-35138658 Msa0161040:CDS 50.0%
! TAAAAGGCAGAGAGCATGGG+TGG - chr1_4:35138655-35138674 Msa0161040:CDS 50.0%
TTCTCTTTGAGCCCCATGAC+AGG + chr1_4:35138986-35139005 None:intergenic 50.0%
! ATTGATGGATGCGCTGCTTC+TGG - chr1_4:35139033-35139052 Msa0161040:CDS 50.0%
GCTTCTGGATGCACAAGAGA+TGG - chr1_4:35139048-35139067 Msa0161040:CDS 50.0%
TGGAGGGAAGATCCAGAATC+TGG - chr1_4:35139077-35139096 Msa0161040:CDS 50.0%
GGAGGGAAGATCCAGAATCT+GGG - chr1_4:35139078-35139097 Msa0161040:CDS 50.0%
CGTTGCCAATGAATCCAGTG+TGG - chr1_4:35139354-35139373 Msa0161040:CDS 50.0%
GCCAATGAATCCAGTGTGGT+TGG - chr1_4:35139358-35139377 Msa0161040:CDS 50.0%
TTGAAGGCAGTGACACCCAT+AGG + chr1_4:35139540-35139559 None:intergenic 50.0%
CAGGTACTTTGTATGCGCCA+AGG + chr1_4:35139659-35139678 None:intergenic 50.0%
! ATCGGGTATTGCCCTGTTCA+AGG + chr1_4:35139728-35139747 None:intergenic 50.0%
CTGCTTCCCGTTGACATATC+GGG + chr1_4:35139745-35139764 None:intergenic 50.0%
AATGTAGCCCAACATGCAGC+AGG - chr1_4:35139790-35139809 Msa0161040:CDS 50.0%
GATCGTACCTGCTGCATGTT+GGG + chr1_4:35139800-35139819 None:intergenic 50.0%
AGATCGTACCTGCTGCATGT+TGG + chr1_4:35139801-35139820 None:intergenic 50.0%
!! AGGAGTGGTCAAGAGTGTTG+CGG - chr1_4:35140016-35140035 Msa0161040:CDS 50.0%
TGGGTCTTCATTCGAATCCG+TGG + chr1_4:35140347-35140366 None:intergenic 50.0%
ATCTGCAACCCGGCGAATAA+TGG + chr1_4:35140377-35140396 None:intergenic 50.0%
ACTCAAGAGGGGAGTAAACC+TGG - chr1_4:35140505-35140524 Msa0161040:CDS 50.0%
CTCAAGAGGGGAGTAAACCT+GGG - chr1_4:35140506-35140525 Msa0161040:CDS 50.0%
TCTGACCTCCAAACTCTGTG+GGG - chr1_4:35140856-35140875 Msa0161040:CDS 50.0%
CAAACAGTCCCCACAGAGTT+TGG + chr1_4:35140867-35140886 None:intergenic 50.0%
GTGGGGACTGTTTGTAGATG+AGG - chr1_4:35140873-35140892 Msa0161040:CDS 50.0%
AGATGAGGAGACTCCAGTGA+AGG - chr1_4:35140888-35140907 Msa0161040:CDS 50.0%
! GAAGGATGGCTTGGACAGAT+TGG - chr1_4:35140906-35140925 Msa0161040:CDS 50.0%
GTTGAGCTGTCATTGCCTCT+TGG + chr1_4:35140978-35140997 None:intergenic 50.0%
AACTTGACACGGTAGCAGAC+TGG - chr1_4:35140995-35141014 Msa0161040:CDS 50.0%
GAGATGAAGAAGGTCGACCT+TGG - chr1_4:35141061-35141080 Msa0161040:CDS 50.0%
TTACTCGCAGAGTCATACGC+GGG - chr1_4:35141273-35141292 Msa0161040:CDS 50.0%
ACTCCCATGTCTCAGACAAC+TGG - chr1_4:35141395-35141414 Msa0161040:CDS 50.0%
!! GTCCATCAGGAAGCATTTGC+AGG + chr1_4:35141440-35141459 None:intergenic 50.0%
! GAGTATGCAGTGTTGGGTGG+TGG - chr1_4:35137030-35137049 Msa0161040:CDS 55.0%
AAGAGAGCTGAGGTCGATGC+AGG - chr1_4:35137080-35137099 Msa0161040:CDS 55.0%
AGAGAGCTGAGGTCGATGCA+GGG - chr1_4:35137081-35137100 Msa0161040:CDS 55.0%
GAGGTCGATGCAGGGATTGT+TGG - chr1_4:35137089-35137108 Msa0161040:CDS 55.0%
CAGGGATTGTTGGAACAGGC+CGG - chr1_4:35137099-35137118 Msa0161040:CDS 55.0%
AGGGATTGTTGGAACAGGCC+GGG - chr1_4:35137100-35137119 Msa0161040:CDS 55.0%
! GGAAGTTGCTGGTGATGCAG+AGG - chr1_4:35137179-35137198 Msa0161040:CDS 55.0%
AGTTGCAGAAGATCCGCAGG+AGG - chr1_4:35137289-35137308 Msa0161040:CDS 55.0%
! GATGACGGTGCTTCTCTTCC+TGG + chr1_4:35137381-35137400 None:intergenic 55.0%
TGCTAGGGACACAACTGAGG+TGG + chr1_4:35137409-35137428 None:intergenic 55.0%
GGACAGGGTGAAACTGAAGC+AGG + chr1_4:35138472-35138491 None:intergenic 55.0%
GCTTCAGTTTCACCCTGTCC+TGG - chr1_4:35138472-35138491 Msa0161040:CDS 55.0%
! TCCTCGTATCGGCCTGTCAT+GGG - chr1_4:35138971-35138990 Msa0161040:CDS 55.0%
GGGAAGATCCAGAATCTGGG+TGG - chr1_4:35139081-35139100 Msa0161040:CDS 55.0%
CAGTTGCTCCACCCAGATTC+TGG + chr1_4:35139092-35139111 None:intergenic 55.0%
!! GGAGTGGTCAAGAGTGTTGC+GGG - chr1_4:35140017-35140036 Msa0161040:CDS 55.0%
!! GAGTGGTCAAGAGTGTTGCG+GGG - chr1_4:35140018-35140037 Msa0161040:CDS 55.0%
! TTTGTGGGTTGCCGAGAGTC+TGG - chr1_4:35140188-35140207 Msa0161040:CDS 55.0%
GGAGAGAACGTCCCTGTAGT+AGG + chr1_4:35140470-35140489 None:intergenic 55.0%
ACAGTCCCCACAGAGTTTGG+AGG + chr1_4:35140864-35140883 None:intergenic 55.0%
GAGGAGACTCCAGTGAAGGA+TGG - chr1_4:35140892-35140911 Msa0161040:CDS 55.0%
GACTCCAGTGAAGGATGGCT+TGG - chr1_4:35140897-35140916 Msa0161040:CDS 55.0%
CTGTCCAAGCCATCCTTCAC+TGG + chr1_4:35140904-35140923 None:intergenic 55.0%
TAGACCGTTGGCGACGTTGG+CGG + chr1_4:35136992-35137011 None:intergenic 60.0%
GGATAGACCGTTGGCGACGT+TGG + chr1_4:35136995-35137014 None:intergenic 60.0%
ATACGAGGAGGAGGAGGAGG+CGG + chr1_4:35138960-35138979 None:intergenic 60.0%
CCTCCTCCTCCTCCTCGTAT+CGG - chr1_4:35138960-35138979 Msa0161040:CDS 60.0%
CATGACAGGCCGATACGAGG+AGG + chr1_4:35138972-35138991 None:intergenic 60.0%
! CTCCTCGTATCGGCCTGTCA+TGG - chr1_4:35138970-35138989 Msa0161040:CDS 60.0%
! CCTCGTATCGGCCTGTCATG+GGG - chr1_4:35138972-35138991 Msa0161040:CDS 60.0%
CGCCGGAGCTAGTTGCAGAA+AGG - chr1_4:35140238-35140257 Msa0161040:CDS 60.0%
TCAGCCGCCAACGTCGCCAA+CGG - chr1_4:35136985-35137004 Msa0161040:CDS 65.0%
TTCTCCGTACCCACGCTGCC+CGG + chr1_4:35137121-35137140 None:intergenic 65.0%
! GGAGGCGGCTGCTTCTGGAA+TGG + chr1_4:35138945-35138964 None:intergenic 65.0%
CCGATACGAGGAGGAGGAGG+AGG + chr1_4:35138963-35138982 None:intergenic 65.0%
AGGCCGATACGAGGAGGAGG+AGG + chr1_4:35138966-35138985 None:intergenic 65.0%
GACAGGCCGATACGAGGAGG+AGG + chr1_4:35138969-35138988 None:intergenic 65.0%
CCCCATGACAGGCCGATACG+AGG + chr1_4:35138975-35138994 None:intergenic 65.0%
TTGGAACAGGCCGGGCAGCG+TGG - chr1_4:35137108-35137127 Msa0161040:CDS 70.0%
TGGAACAGGCCGGGCAGCGT+GGG - chr1_4:35137109-35137128 Msa0161040:CDS 70.0%
GAGGAGGAGGCGGCTGCTTC+TGG + chr1_4:35138950-35138969 None:intergenic 70.0%
CAGGCCGGGCAGCGTGGGTA+CGG - chr1_4:35137114-35137133 Msa0161040:CDS 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 35136955 35141575 35136955 ID=Msa0161040;Name=Msa0161040
chr1_4 mRNA 35136955 35141575 35136955 ID=Msa0161040-mRNA-1;Parent=Msa0161040;Name=Msa0161040-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|2|0|1525
chr1_4 exon 35138240 35141575 35138240 ID=Msa0161040-mRNA-1:exon:10634;Parent=Msa0161040-mRNA-1
chr1_4 exon 35136955 35138196 35136955 ID=Msa0161040-mRNA-1:exon:10633;Parent=Msa0161040-mRNA-1
chr1_4 CDS 35138240 35141575 35138240 ID=Msa0161040-mRNA-1:cds;Parent=Msa0161040-mRNA-1
chr1_4 CDS 35136955 35138196 35136955 ID=Msa0161040-mRNA-1:cds;Parent=Msa0161040-mRNA-1
Gene Sequence

>Msa0161040

ATGGCCGACTTTGGAATTTCATTAGCTTTATCAGCCGCCAACGTCGCCAACGGTCTATCCAAAATCCTGATTGAAGAGTATGCAGTGTTGGGTGGTGGGACAATTAGGCACGTAGAATGGATTGAAAGAGAGCTGAGGTCGATGCAGGGATTGTTGGAACAGGCCGGGCAGCGTGGGTACGGAGAACAAGAGCAAGAGTTTAACGAGTGGGAAGAGAAGTTGAAGGAAGTTGCTGGTGATGCAGAGGATGTGATAGAAACTTTTGTGATCAAATCGGTGAAAAGGAGGAGATGGGGAGTTCTGTATTGGATTGACAAACACAAGGTTGGGAAAGAGTTGCAGAAGATCCGCAGGAGGATGAGAGACATCTCTCAGACTGGAATGAACTTGAACACAAATGTCGTCAGTGTCTCTGTTGAAACTCCAGGAAGAGAAGCACCGTCATCAACAACCACCTCAGTTGTGTCCCTAGCAATGGAGAAGCTTGATCACATTCTGAGTCAAACTACTATAGTTACTGGTGAAGAGGTGATTGAGATGGTGGAACGAGTAAGAGGTGAATTCACCCGCCTGCAAAATGATATTGTGTCTAATTTGAGGTCAACAAGTGAAAGAGAAAATGTGTGGTTAGAAGAGGCGAAGGAACTTTGCAATTATACTGAAAGTGTTGCAGGTAATTTCATCCTTGTCAAGGAAAGACGGTCTAAAATGGGTAGGCTTAAGAAGCTCCTTTATCTTTCAGCCGATTATGCTTCTGAAAATGAATTTAAAAAACAGATGAAGTATATCGGGACTCGAATTGGAGATGCAGTTCACATAAGTGTGACTTACGAAGTTGGTGGACAATTAGACATGGGAGTGGGATTCAAAAAAACATCCCCTGTACCAGACTTGTCAATAGAGAGCTTGATAATTTTCCACATCCTATTCCTTTTTGTTTGCCCTGTTATTGTTCTTTCCGACTTCTCGAAACCCTCCTTGTTTTTATTGTTAGTAATCATCTATCCCATTTTCATAATTGTTGATGAACGAGGAAGAAAAACATATAAGTCCAGTATGATGATGTTGAAGAAGAAGAAGAAGAAGAAGAAATGGATGGGAAGGATAAGACAGTTTCTGCGCTTGTTTTTTTCCACTGTAATTTATTTCACGATTTTCATCCTGTTTCAGATTTACCCTGTCATGGGAACGTTCCTTTTCATCTTGAGTTTTTCCCTTACTGAAGTTATTGCGTGGAGTCTAAAGAAGAAGAAGAGATGGAAGAGAAGGGAAATAATAAGACGGTTTACGTGCTTCTTGTTTTCCACTGTAATTTATTTACCGATATTTTTCATGTTTAAGTTTCACCCTGTTCTGGCAATGTTCCTTTTCATATTGGGTTATTCACTTAATAAAAGTATTGCACGGAGTCTGAAGAAGAAGAAGAAGAAGAAGAAGAAATGGAAGGGAATGGAAAAAATAATACAGTCTCCGCGCCTTTTTTTTAACGCTCTAAGTTATTTTGCGTTTTTCTCCCTGCTTCAGTTTCACCCTGTCCTGGCAGTGTTCCTTTTCATATTGAGTAATTTACTTTATGAAGTTATTGCATGGACTGTGAATTTATGGAGGTCTACAGCCAATAATTTGAAGTGTACAGAAAGATATTTAGCTGTAATGCGTGTGTTTTTGAATGATACAACCGAAAGTGCGGAAGGCCTAAGTAAAAGGCAGAGAGCATGGGTGGATCAACTGAGAGTCGTGTCTCAAAATGGTGAATTTCTTATTGATGGAGATGCAAAAGTTAAGGGTGGTTGTTTGAGCAGAATTAAGTTTGCCAAGGATATCAACTGTTTGTTGAAAGAGATTCTTGATATATCAGATAGGAAGGCCATTTATTGCATTGGAAATGTTCAAAGAAATCAACAAGAGCTTGTACCTTTATTGGGCAATGGGCATACAAGAGATATTGAGAATGAAATCATTGTTGAACACGCTGGAAATTCTAGTGCCATTCCAGAAGCAGCCGCCTCCTCCTCCTCCTCGTATCGGCCTGTCATGGGGCTCAAAGAGAAAGTCCAATCAATCAGAAGGGAAAAGGAATTGATGGATGCGCTGCTTCTGGATGCACAAGAGATGGGAGAATTGGAGGGAAGATCCAGAATCTGGGTGGAGCAACTGAGAGATATTTCCCTTGAAGTTCAATCTGTCATTAACAAATATGATGCCAAACTGAAGCATAAGCCAAATGTCATCTACATTTTTAAGTACTGGACCCGACGTGTTCTTAATAAGAAGGTAGATGGTATCAAAAACAAAATTGAAGAAGCTTCTAGGAGAAGAAAAGCATATCGTTTGGTGCAAATTCAAAGCCGAGCCGTATCCATGTTTCAAATATTACGTGCAAGGACGCAACTGTCTCTCGTTGCCAATGAATCCAGTGTGGTTGGATTTCATGATGACAGACAAGCTCTGATGGCTGAGTTACTGTCAGACGAGAAACGTCGCTGCATTACTTGGATTGTTGGAATCGAAGGCACGGGTAAGACAGCACTAGCAAAGTTGGTATTTGAAGACAACACTGTTGTAGCTCATTTTCAGCATCGCCTATGGGTGTCACTGCCTTCAAATTGTACGACAAACCAGTTTGTTGCAGAAATTGGCAAGGAAGCCGCCGAACAAATTACTGTAGAAGAAGTCTTGTCAACTGATTATGTACTCACAACCTTGGCGCATACAAAGTACCTGTTAATTGTTGATGGCATAAAAGAAACTTCTCAAGTATACTTGGATACCTTGAACAGGGCAATACCCGATATGTCAACGGGAAGCAGAGTTCTTTTTACAACTCGCAATGCAAATGTAGCCCAACATGCAGCAGGTACGATCTTTGTTCACCCGCTACAGTTACTAGATGATGAAACTAGTTGGCTGTTGTTCACAAGACATTTGAAGGTGGACATTCACCCCGAGTCAGAAACAAAACTTATCAAGGTTGGAAAAGAAATTGTAATGAAATGTGGGGGGCTGCCATCACAAATATTGAAAATGAGTGATTTGCTTTCGCATAAAGATGTTACACATGAGGAGTGGTCAAGAGTGTTGCGGGGCGAGCAGCTCAATGAAGATCAAATACAAAGTTGGTCTGGAATGCTCGACACAATTAATAATAACTTACCTTCTTATCTGAGAAGATGTCTATTTTACTTTGTGATATTCCCAGCTGAATTTTGGATCCCTGTAAGAAGGTTGGTTGTTTTGTGGGTTGCCGAGAGTCTGGTTCATCAGACAGAAGATGACGAAATGTCGCCGGAGCTAGTTGCAGAAAGGTACTTGACAGAGTTGATAGATAGGAACATGAGTCAATCTGCCACGGATTCGAATGAAGACCCAAAGAAGTCCATTATTCGCCGGGTTGCAGATCATCTTGATAAAGATGATATCTGGAATGATCACATTCATGGTGACATTACTGATTCAACTTCCCTTAAAACCTACTACAGGGACGTTCTCTCCTTTCTTTCCTTTGATACTCAAGAGGGGAGTAAACCTGGGCATCAAGTAGGTAACTTTCTCAAGGGATGTATTTCAAGTGATTGCTTCTTGCTCCTTCGTGTGCTTGATCTTGAACGCGTTTACAAGCCCAAGTTGCCTAATCGCATAGCAAGACTTTCACGGCTAAGGTATCTTGGCTTGAGATGGACTTACTTAGAGTCACTTCCATCATCTATAAGCAAGTTGTTGAAGCTACAGACTCTTGATCTCAAACATACTTATATACATACTCTACCTAGCTCAATATGGAAGATGGAACTCAGACACTTGTTCTTGAGCGAGACTTTCCGAAGCAGATTTCCACCTCAACCAAAAGGTAATTCTCTATCTGACCTCCAAACTCTGTGGGGACTGTTTGTAGATGAGGAGACTCCAGTGAAGGATGGCTTGGACAGATTGGTCAATATCACAAAATTGGGATTAGCATGCCAATCAATGTCACTAAACCAAGAGGCAATGACAGCTCAACTTGACACGGTAGCAGACTGGATTACGAAACTAGAACACCTTCAATCGCTGAGACTGAAATCAAGAGATGAAGAAGGTCGACCTTGGAATTTACACTTGAAGTCCTTGGAGAATAACATAAATCTCACTGACATGTATTTACTGGGAAGATTGAGCAGTTCATTTGTTCTGTCTCAATTCCCTCTGAGCCTCATTGAACTTACCCTATCACATTCGGAACTAGAGGATGATCCCATGATACTTTTGAAAGATTTTCCACATCTTCGAACACTGTGTTTACTCGCAGAGTCATACGCGGGCACAACTGTGATTTGTGAATCTCAAAGCTTTCCTCAGCTTCATGTCTTAAAATTTTGGAAGCTGTGGTATTTGGAGGAAATTAAGATAGAGCGAGGAGCACTCCCATGTCTCAGACAACTGGAAATCAGATCGTGTCCGAACCTGCAAATGCTTCCTGATGGACTAAAGCATGTCAACACTCTGCTTGAATTGAAGTTAACAAACATGCCAATGGAAATCAATGCTGAGGCGCATAACATCCCAACCAATTGTCAAGTCGTCCAAACTAAATTTCAGTAG
Protein sequence

>Msa0161040

MADFGISLALSAANVANGLSKILIEEYAVLGGGTIRHVEWIERELRSMQGLLEQAGQRGYGEQEQEFNEWEEKLKEVAGDAEDVIETFVIKSVKRRRWGVLYWIDKHKVGKELQKIRRRMRDISQTGMNLNTNVVSVSVETPGREAPSSTTTSVVSLAMEKLDHILSQTTIVTGEEVIEMVERVRGEFTRLQNDIVSNLRSTSERENVWLEEAKELCNYTESVAGNFILVKERRSKMGRLKKLLYLSADYASENEFKKQMKYIGTRIGDAVHISVTYEVGGQLDMGVGFKKTSPVPDLSIESLIIFHILFLFVCPVIVLSDFSKPSLFLLLVIIYPIFIIVDERGRKTYKSSMMMLKKKKKKKKWMGRIRQFLRLFFSTVIYFTIFILFQIYPVMGTFLFILSFSLTEVIAWSLKKKKRWKRREIIRRFTCFLFSTVIYLPIFFMFKFHPVLAMFLFILGYSLNKSIARSLKKKKKKKKKWKGMEKIIQSPRLFFNALSYFAFFSLLQFHPVLAVFLFILSNLLYEVIAWTVNLWRSTANNLKCTERYLAVMRVFLNDTTESAEGLSKRQRAWVDQLRVVSQNGEFLIDGDAKVKGGCLSRIKFAKDINCLLKEILDISDRKAIYCIGNVQRNQQELVPLLGNGHTRDIENEIIVEHAGNSSAIPEAAASSSSSYRPVMGLKEKVQSIRREKELMDALLLDAQEMGELEGRSRIWVEQLRDISLEVQSVINKYDAKLKHKPNVIYIFKYWTRRVLNKKVDGIKNKIEEASRRRKAYRLVQIQSRAVSMFQILRARTQLSLVANESSVVGFHDDRQALMAELLSDEKRRCITWIVGIEGTGKTALAKLVFEDNTVVAHFQHRLWVSLPSNCTTNQFVAEIGKEAAEQITVEEVLSTDYVLTTLAHTKYLLIVDGIKETSQVYLDTLNRAIPDMSTGSRVLFTTRNANVAQHAAGTIFVHPLQLLDDETSWLLFTRHLKVDIHPESETKLIKVGKEIVMKCGGLPSQILKMSDLLSHKDVTHEEWSRVLRGEQLNEDQIQSWSGMLDTINNNLPSYLRRCLFYFVIFPAEFWIPVRRLVVLWVAESLVHQTEDDEMSPELVAERYLTELIDRNMSQSATDSNEDPKKSIIRRVADHLDKDDIWNDHIHGDITDSTSLKTYYRDVLSFLSFDTQEGSKPGHQVGNFLKGCISSDCFLLLRVLDLERVYKPKLPNRIARLSRLRYLGLRWTYLESLPSSISKLLKLQTLDLKHTYIHTLPSSIWKMELRHLFLSETFRSRFPPQPKGNSLSDLQTLWGLFVDEETPVKDGLDRLVNITKLGLACQSMSLNQEAMTAQLDTVADWITKLEHLQSLRLKSRDEEGRPWNLHLKSLENNINLTDMYLLGRLSSSFVLSQFPLSLIELTLSHSELEDDPMILLKDFPHLRTLCLLAESYAGTTVICESQSFPQLHVLKFWKLWYLEEIKIERGALPCLRQLEIRSCPNLQMLPDGLKHVNTLLELKLTNMPMEINAEAHNIPTNCQVVQTKFQ*