Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0839900 | XP_003612522.1 | 97.496 | 559 | 13 | 1 | 1 | 559 | 1 | 558 | 0.0 | 1123 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0839900 | sp|Q56WM6|ROGFE_ARATH | 60.976 | 574 | 192 | 9 | 1 | 547 | 1 | 569 | 0.0 | 648 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0839900 | F6LPV3 | 97.496 | 559 | 13 | 1 | 1 | 559 | 1 | 558 | 0.0 | 1123 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000220 | Msa0839900 | 0.808475 | 3.041201e-50 | -8.615850e-47 |
Msa0001510 | Msa0839900 | 0.804138 | 2.494302e-49 | -8.615850e-47 |
Msa0001540 | Msa0839900 | 0.837923 | 3.902627e-57 | -8.615850e-47 |
Msa0002690 | Msa0839900 | 0.816595 | 5.098980e-52 | -8.615850e-47 |
Msa0002700 | Msa0839900 | 0.820216 | 7.710672e-53 | -8.615850e-47 |
Msa0009210 | Msa0839900 | 0.841728 | 3.984188e-58 | -8.615850e-47 |
Msa0016160 | Msa0839900 | 0.811721 | 6.075381e-51 | -8.615850e-47 |
Msa0021570 | Msa0839900 | 0.823090 | 1.669780e-53 | -8.615850e-47 |
Msa0024070 | Msa0839900 | 0.819541 | 1.100109e-52 | -8.615850e-47 |
Msa0025830 | Msa0839900 | 0.802182 | 6.333171e-49 | -8.615850e-47 |
Msa0028940 | Msa0839900 | 0.801815 | 7.536821e-49 | -8.615850e-47 |
Msa0030710 | Msa0839900 | 0.822701 | 2.057899e-53 | -8.615850e-47 |
Msa0032340 | Msa0839900 | -0.821423 | 4.070171e-53 | -8.615850e-47 |
Msa0033580 | Msa0839900 | 0.803417 | 3.520390e-49 | -8.615850e-47 |
Msa0034320 | Msa0839900 | 0.803785 | 2.952928e-49 | -8.615850e-47 |
Msa0045530 | Msa0839900 | 0.813444 | 2.552308e-51 | -8.615850e-47 |
Msa0047400 | Msa0839900 | 0.814393 | 1.576668e-51 | -8.615850e-47 |
Msa0050560 | Msa0839900 | 0.803512 | 3.365209e-49 | -8.615850e-47 |
Msa0058140 | Msa0839900 | 0.814070 | 1.857558e-51 | -8.615850e-47 |
Msa0058970 | Msa0839900 | 0.843569 | 1.292664e-58 | -8.615850e-47 |
Msa0069590 | Msa0839900 | 0.809447 | 1.884064e-50 | -8.615850e-47 |
Msa0071020 | Msa0839900 | 0.811136 | 8.142739e-51 | -8.615850e-47 |
Msa0075080 | Msa0839900 | 0.818383 | 2.016958e-52 | -8.615850e-47 |
Msa0076990 | Msa0839900 | 0.803401 | 3.547579e-49 | -8.615850e-47 |
Msa0077990 | Msa0839900 | 0.811321 | 7.424411e-51 | -8.615850e-47 |
Msa0078110 | Msa0839900 | 0.814806 | 1.277316e-51 | -8.615850e-47 |
Msa0079520 | Msa0839900 | -0.822390 | 2.430243e-53 | -8.615850e-47 |
Msa0079550 | Msa0839900 | 0.808848 | 2.531291e-50 | -8.615850e-47 |
Msa0081300 | Msa0839900 | 0.814626 | 1.400209e-51 | -8.615850e-47 |
Msa0093830 | Msa0839900 | 0.833743 | 4.476029e-56 | -8.615850e-47 |
Msa0097490 | Msa0839900 | 0.804794 | 1.820998e-49 | -8.615850e-47 |
Msa0102290 | Msa0839900 | 0.860624 | 1.813572e-63 | -8.615850e-47 |
Msa0109870 | Msa0839900 | 0.812274 | 4.603395e-51 | -8.615850e-47 |
Msa0607070 | Msa0839900 | 0.837863 | 4.044516e-57 | -8.615850e-47 |
Msa0616570 | Msa0839900 | 0.818143 | 2.285714e-52 | -8.615850e-47 |
Msa0619060 | Msa0839900 | 0.808784 | 2.612959e-50 | -8.615850e-47 |
Msa0619170 | Msa0839900 | 0.811457 | 6.934811e-51 | -8.615850e-47 |
Msa0623350 | Msa0839900 | 0.800656 | 1.301236e-48 | -8.615850e-47 |
Msa0644610 | Msa0839900 | 0.804984 | 1.661348e-49 | -8.615850e-47 |
Msa0646710 | Msa0839900 | 0.808527 | 2.964715e-50 | -8.615850e-47 |
Msa0649140 | Msa0839900 | 0.812104 | 5.013971e-51 | -8.615850e-47 |
Msa0653090 | Msa0839900 | 0.806400 | 8.378770e-50 | -8.615850e-47 |
Msa0655980 | Msa0839900 | 0.812467 | 4.178146e-51 | -8.615850e-47 |
Msa0660160 | Msa0839900 | 0.809393 | 1.934713e-50 | -8.615850e-47 |
Msa0661490 | Msa0839900 | 0.804898 | 1.732099e-49 | -8.615850e-47 |
Msa0663540 | Msa0839900 | 0.801124 | 1.043955e-48 | -8.615850e-47 |
Msa0679270 | Msa0839900 | 0.810431 | 1.156725e-50 | -8.615850e-47 |
Msa0679880 | Msa0839900 | 0.810584 | 1.071681e-50 | -8.615850e-47 |
Msa0687650 | Msa0839900 | 0.830209 | 3.340520e-55 | -8.615850e-47 |
Msa0687740 | Msa0839900 | 0.837159 | 6.128619e-57 | -8.615850e-47 |
Msa0688350 | Msa0839900 | 0.815119 | 1.088477e-51 | -8.615850e-47 |
Msa0695470 | Msa0839900 | 0.824342 | 8.500986e-54 | -8.615850e-47 |
Msa0697230 | Msa0839900 | 0.806646 | 7.433500e-50 | -8.615850e-47 |
Msa0699900 | Msa0839900 | 0.818738 | 1.676096e-52 | -8.615850e-47 |
Msa0703620 | Msa0839900 | 0.809160 | 2.170715e-50 | -8.615850e-47 |
Msa0704750 | Msa0839900 | 0.803234 | 3.842574e-49 | -8.615850e-47 |
Msa0705610 | Msa0839900 | 0.808529 | 2.961636e-50 | -8.615850e-47 |
Msa0706490 | Msa0839900 | 0.819428 | 1.167546e-52 | -8.615850e-47 |
Msa0708120 | Msa0839900 | 0.821316 | 4.307872e-53 | -8.615850e-47 |
Msa0708450 | Msa0839900 | 0.820094 | 8.224918e-53 | -8.615850e-47 |
Msa0711510 | Msa0839900 | 0.831705 | 1.434590e-55 | -8.615850e-47 |
Msa0712070 | Msa0839900 | 0.827944 | 1.182315e-54 | -8.615850e-47 |
Msa0718900 | Msa0839900 | 0.928795 | 1.739786e-92 | -8.615850e-47 |
Msa0720380 | Msa0839900 | 0.810046 | 1.400209e-50 | -8.615850e-47 |
Msa0720850 | Msa0839900 | 0.808673 | 2.758646e-50 | -8.615850e-47 |
Msa0733110 | Msa0839900 | 0.838760 | 2.375093e-57 | -8.615850e-47 |
Msa0748470 | Msa0839900 | 0.821943 | 3.086235e-53 | -8.615850e-47 |
Msa0748890 | Msa0839900 | 0.822563 | 2.215925e-53 | -8.615850e-47 |
Msa0749940 | Msa0839900 | 0.824738 | 6.860691e-54 | -8.615850e-47 |
Msa0751640 | Msa0839900 | 0.836836 | 7.408378e-57 | -8.615850e-47 |
Msa0760080 | Msa0839900 | 0.911711 | 4.463376e-83 | -8.615850e-47 |
Msa0761930 | Msa0839900 | 0.806709 | 7.212185e-50 | -8.615850e-47 |
Msa0772530 | Msa0839900 | 0.851188 | 1.044232e-60 | -8.615850e-47 |
Msa0788490 | Msa0839900 | 0.810176 | 1.313169e-50 | -8.615850e-47 |
Msa0794300 | Msa0839900 | 0.813254 | 2.809215e-51 | -8.615850e-47 |
Msa0801490 | Msa0839900 | 0.953497 | 2.407476e-111 | -8.615850e-47 |
Msa0811710 | Msa0839900 | 0.843542 | 1.314483e-58 | -8.615850e-47 |
Msa0821490 | Msa0839900 | 0.800318 | 1.524343e-48 | -8.615850e-47 |
Msa0828810 | Msa0839900 | 0.810202 | 1.295759e-50 | -8.615850e-47 |
Msa0831710 | Msa0839900 | 0.828136 | 1.063270e-54 | -8.615850e-47 |
Msa0833980 | Msa0839900 | 0.808976 | 2.377148e-50 | -8.615850e-47 |
Msa0837040 | Msa0839900 | 0.825304 | 5.041332e-54 | -8.615850e-47 |
Msa0839900 | Msa0851870 | 0.844576 | 6.939699e-59 | -8.615850e-47 |
Msa0839900 | Msa0855490 | 0.813302 | 2.742049e-51 | -8.615850e-47 |
Msa0839900 | Msa0866650 | 0.819609 | 1.061719e-52 | -8.615850e-47 |
Msa0839900 | Msa0868140 | 0.825417 | 4.740680e-54 | -8.615850e-47 |
Msa0839900 | Msa0871860 | 0.821561 | 3.782254e-53 | -8.615850e-47 |
Msa0839900 | Msa0880200 | 0.828222 | 1.013425e-54 | -8.615850e-47 |
Msa0839900 | Msa0893390 | 0.801981 | 6.967670e-49 | -8.615850e-47 |
Msa0839900 | Msa0894530 | 0.819238 | 1.289684e-52 | -8.615850e-47 |
Msa0839900 | Msa0898720 | 0.801813 | 7.542210e-49 | -8.615850e-47 |
Msa0839900 | Msa0899140 | 0.825322 | 4.993602e-54 | -8.615850e-47 |
Msa0839900 | Msa0905200 | 0.822095 | 2.844687e-53 | -8.615850e-47 |
Msa0839900 | Msa0921200 | 0.823142 | 1.624084e-53 | -8.615850e-47 |
Msa0839900 | Msa0926090 | 0.816687 | 4.862701e-52 | -8.615850e-47 |
Msa0839900 | Msa0929440 | 0.812671 | 3.769558e-51 | -8.615850e-47 |
Msa0839900 | Msa0930160 | 0.824835 | 6.508809e-54 | -8.615850e-47 |
Msa0839900 | Msa0931080 | 0.804861 | 1.762822e-49 | -8.615850e-47 |
Msa0839900 | Msa0932040 | 0.801439 | 9.000732e-49 | -8.615850e-47 |
Msa0839900 | Msa0933320 | 0.800001 | 1.768836e-48 | -8.615850e-47 |
Msa0839900 | Msa0934800 | 0.819486 | 1.132601e-52 | -8.615850e-47 |
Msa0839900 | Msa0937180 | 0.810991 | 8.753653e-51 | -8.615850e-47 |
Msa0839900 | Msa0937190 | 0.826343 | 2.857992e-54 | -8.615850e-47 |
Msa0839900 | Msa0959710 | 0.843794 | 1.125511e-58 | -8.615850e-47 |
Msa0839900 | Msa0959970 | 0.809572 | 1.770684e-50 | -8.615850e-47 |
Msa0839900 | Msa0967940 | 0.829500 | 4.971551e-55 | -8.615850e-47 |
Msa0839900 | Msa0970160 | 0.802977 | 4.341975e-49 | -8.615850e-47 |
Msa0839900 | Msa0971100 | 0.800049 | 1.729661e-48 | -8.615850e-47 |
Msa0839900 | Msa0974480 | 0.807012 | 6.222465e-50 | -8.615850e-47 |
Msa0839900 | Msa0978540 | 0.802987 | 4.321990e-49 | -8.615850e-47 |
Msa0839900 | Msa0985570 | 0.804292 | 2.316483e-49 | -8.615850e-47 |
Msa0839900 | Msa1002980 | 0.805303 | 1.424687e-49 | -8.615850e-47 |
Msa0839900 | Msa1030440 | 0.801397 | 9.177638e-49 | -8.615850e-47 |
Msa0839900 | Msa1031650 | 0.811869 | 5.640939e-51 | -8.615850e-47 |
Msa0839900 | Msa1035090 | 0.856861 | 2.416016e-62 | -8.615850e-47 |
Msa0839900 | Msa1037570 | 0.812160 | 4.874675e-51 | -8.615850e-47 |
Msa0839900 | Msa1040010 | 0.818020 | 2.437343e-52 | -8.615850e-47 |
Msa0839900 | Msa1040030 | 0.808975 | 2.378225e-50 | -8.615850e-47 |
Msa0839900 | Msa1047390 | 0.801750 | 7.769044e-49 | -8.615850e-47 |
Msa0839900 | Msa1052800 | 0.814875 | 1.232942e-51 | -8.615850e-47 |
Msa0839900 | Msa1054480 | 0.801497 | 8.755071e-49 | -8.615850e-47 |
Msa0839900 | Msa1054620 | 0.803631 | 3.178879e-49 | -8.615850e-47 |
Msa0839900 | Msa1055490 | 0.801119 | 1.046260e-48 | -8.615850e-47 |
Msa0839900 | Msa1061420 | 0.802983 | 4.330711e-49 | -8.615850e-47 |
Msa0839900 | Msa1070710 | 0.811249 | 7.695731e-51 | -8.615850e-47 |
Msa0839900 | Msa1070930 | 0.813193 | 2.897939e-51 | -8.615850e-47 |
Msa0839900 | Msa1084150 | 0.839776 | 1.294287e-57 | -8.615850e-47 |
Msa0839900 | Msa1086280 | 0.802314 | 5.948855e-49 | -8.615850e-47 |
Msa0839900 | Msa1086880 | 0.804225 | 2.392555e-49 | -8.615850e-47 |
Msa0839900 | Msa1090230 | 0.800405 | 1.463459e-48 | -8.615850e-47 |
Msa0839900 | Msa1118870 | 0.801611 | 8.296877e-49 | -8.615850e-47 |
Msa0839900 | Msa1127510 | 0.832351 | 9.931694e-56 | -8.615850e-47 |
Msa0839900 | Msa1127530 | 0.825607 | 4.274552e-54 | -8.615850e-47 |
Msa0839900 | Msa1131010 | 0.802376 | 5.776492e-49 | -8.615850e-47 |
Msa0839900 | Msa1134840 | 0.810947 | 8.945712e-51 | -8.615850e-47 |
Msa0839900 | Msa1140940 | 0.813287 | 2.763103e-51 | -8.615850e-47 |
Msa0839900 | Msa1156270 | 0.801641 | 8.180200e-49 | -8.615850e-47 |
Msa0839900 | Msa1161550 | 0.814132 | 1.800244e-51 | -8.615850e-47 |
Msa0839900 | Msa1162470 | 0.828150 | 1.054875e-54 | -8.615850e-47 |
Msa0839900 | Msa1165330 | 0.813789 | 2.142651e-51 | -8.615850e-47 |
Msa0839900 | Msa1171640 | 0.813240 | 2.828959e-51 | -8.615850e-47 |
Msa0839900 | Msa1177300 | 0.862834 | 3.827478e-64 | -8.615850e-47 |
Msa0839900 | Msa1180410 | 0.811347 | 7.328610e-51 | -8.615850e-47 |
Msa0839900 | Msa1197210 | 0.801491 | 8.780910e-49 | -8.615850e-47 |
Msa0839900 | Msa1206440 | 0.840443 | 8.668134e-58 | -8.615850e-47 |
Msa0839900 | Msa1206500 | 0.804808 | 1.808255e-49 | -8.615850e-47 |
Msa0839900 | Msa1208630 | 0.801254 | 9.822116e-49 | -8.615850e-47 |
Msa0839900 | Msa1208750 | 0.800574 | 1.352227e-48 | -8.615850e-47 |
Msa0839900 | Msa1211930 | 0.841519 | 4.524617e-58 | -8.615850e-47 |
Msa0839900 | Msa1212070 | 0.823885 | 1.088451e-53 | -8.615850e-47 |
Msa0839900 | Msa1223050 | 0.802341 | 5.875080e-49 | -8.615850e-47 |
Msa0839900 | Msa1223520 | 0.830093 | 3.565677e-55 | -8.615850e-47 |
Msa0839900 | Msa1232010 | 0.813090 | 3.052055e-51 | -8.615850e-47 |
Msa0839900 | Msa1236090 | 0.811980 | 5.335547e-51 | -8.615850e-47 |
Msa0839900 | Msa1236990 | 0.800620 | 1.322946e-48 | -8.615850e-47 |
Msa0839900 | Msa1250490 | 0.805642 | 1.209697e-49 | -8.615850e-47 |
Msa0839900 | Msa1263460 | 0.805471 | 1.314049e-49 | -8.615850e-47 |
Msa0839900 | Msa1263600 | 0.820607 | 6.273799e-53 | -8.615850e-47 |
Msa0839900 | Msa1267800 | 0.808158 | 3.553443e-50 | -8.615850e-47 |
Msa0839900 | Msa1269550 | 0.837137 | 6.206367e-57 | -8.615850e-47 |
Msa0839900 | Msa1274740 | 0.815050 | 1.127473e-51 | -8.615850e-47 |
Msa0839900 | Msa1275290 | 0.823091 | 1.669202e-53 | -8.615850e-47 |
Msa0839900 | Msa1292700 | 0.802906 | 4.492267e-49 | -8.615850e-47 |
Msa0839900 | Msa1296930 | 0.807316 | 5.365657e-50 | -8.615850e-47 |
Msa0839900 | Msa1302750 | 0.828331 | 9.540818e-55 | -8.615850e-47 |
Msa0839900 | Msa1310620 | 0.802423 | 5.650163e-49 | -8.615850e-47 |
Msa0839900 | Msa1312730 | 0.804265 | 2.347636e-49 | -8.615850e-47 |
Msa0839900 | Msa1315990 | 0.808034 | 3.776130e-50 | -8.615850e-47 |
Msa0839900 | Msa1317090 | 0.869758 | 2.434943e-66 | -8.615850e-47 |
Msa0839900 | Msa1317340 | 0.806088 | 9.748239e-50 | -8.615850e-47 |
Msa0839900 | Msa1331900 | 0.806521 | 7.899858e-50 | -8.615850e-47 |
Msa0839900 | Msa1334690 | 0.847820 | 9.079729e-60 | -8.615850e-47 |
Msa0839900 | Msa1336320 | 0.844483 | 7.354180e-59 | -8.615850e-47 |
Msa0839900 | Msa1346890 | 0.803969 | 2.704452e-49 | -8.615850e-47 |
Msa0839900 | Msa1355070 | 0.800245 | 1.577432e-48 | -8.615850e-47 |
Msa0839900 | Msa1356500 | 0.808031 | 3.782420e-50 | -8.615850e-47 |
Msa0839900 | Msa1364650 | 0.818722 | 1.690379e-52 | -8.615850e-47 |
Msa0839900 | Msa1367810 | 0.848226 | 7.015930e-60 | -8.615850e-47 |
Msa0839900 | Msa1371690 | 0.812068 | 5.105620e-51 | -8.615850e-47 |
Msa0839900 | Msa1372460 | 0.807206 | 5.660314e-50 | -8.615850e-47 |
Msa0839900 | Msa1374610 | 0.815385 | 9.497947e-52 | -8.615850e-47 |
Msa0839900 | Msa1375120 | 0.833362 | 5.572029e-56 | -8.615850e-47 |
Msa0839900 | Msa1375570 | 0.809410 | 1.918378e-50 | -8.615850e-47 |
Msa0839900 | Msa1375600 | 0.815604 | 8.489800e-52 | -8.615850e-47 |
Msa0839900 | Msa1376560 | 0.846646 | 1.905788e-59 | -8.615850e-47 |
Msa0839900 | Msa1376590 | 0.817958 | 2.516955e-52 | -8.615850e-47 |
Msa0839900 | Msa1379930 | 0.801594 | 8.364973e-49 | -8.615850e-47 |
Msa0839900 | Msa1386820 | 0.846501 | 2.087466e-59 | -8.615850e-47 |
Msa0839900 | Msa1387650 | 0.801842 | 7.439618e-49 | -8.615850e-47 |
Msa0839900 | Msa1394230 | 0.801408 | 9.131396e-49 | -8.615850e-47 |
Msa0839900 | Msa1398840 | 0.832369 | 9.831478e-56 | -8.615850e-47 |
Msa0839900 | Msa1405990 | 0.810382 | 1.184902e-50 | -8.615850e-47 |
Msa0839900 | Msa1412750 | 0.823020 | 1.734235e-53 | -8.615850e-47 |
Msa0839900 | Msa1416460 | 0.801508 | 8.710079e-49 | -8.615850e-47 |
Msa0839900 | Msa1419760 | 0.816957 | 4.230629e-52 | -8.615850e-47 |
Msa0839900 | Msa1420130 | 0.834376 | 3.105914e-56 | -8.615850e-47 |
Msa0839900 | Msa1422490 | 0.800414 | 1.457313e-48 | -8.615850e-47 |
Msa0839900 | Msa1424240 | 0.812008 | 5.260841e-51 | -8.615850e-47 |
Msa0839900 | Msa1425050 | 0.816124 | 6.501638e-52 | -8.615850e-47 |
Msa0839900 | Msa1427020 | 0.812267 | 4.619824e-51 | -8.615850e-47 |
Msa0839900 | Msa1429390 | 0.844264 | 8.417538e-59 | -8.615850e-47 |
Msa0839900 | Msa1430010 | 0.803195 | 3.914515e-49 | -8.615850e-47 |
Msa0839900 | Msa1430940 | 0.819225 | 1.298644e-52 | -8.615850e-47 |
Msa0839900 | Msa1434860 | 0.801031 | 1.090744e-48 | -8.615850e-47 |
Msa0839900 | Msa1438380 | 0.805089 | 1.579577e-49 | -8.615850e-47 |
Msa0839900 | Msa1444750 | 0.839398 | 1.623349e-57 | -8.615850e-47 |
Msa0839900 | Msa1449680 | 0.802369 | 5.798030e-49 | -8.615850e-47 |
Msa0839900 | Msa1455120 | 0.811040 | 8.538699e-51 | -8.615850e-47 |
Msa0839900 | Msa1455560 | 0.812701 | 3.714397e-51 | -8.615850e-47 |
Msa0839900 | Msa1462700 | 0.800924 | 1.147091e-48 | -8.615850e-47 |
Msa0124070 | Msa0839900 | 0.812027 | 5.211201e-51 | -8.615850e-47 |
Msa0127110 | Msa0839900 | 0.820020 | 8.553259e-53 | -8.615850e-47 |
Msa0131230 | Msa0839900 | 0.829629 | 4.624385e-55 | -8.615850e-47 |
Msa0141090 | Msa0839900 | 0.829948 | 3.867797e-55 | -8.615850e-47 |
Msa0141770 | Msa0839900 | 0.810463 | 1.138378e-50 | -8.615850e-47 |
Msa0147070 | Msa0839900 | 0.843766 | 1.144675e-58 | -8.615850e-47 |
Msa0149070 | Msa0839900 | 0.800712 | 1.267019e-48 | -8.615850e-47 |
Msa0151790 | Msa0839900 | 0.819267 | 1.270647e-52 | -8.615850e-47 |
Msa0164530 | Msa0839900 | 0.815905 | 7.274425e-52 | -8.615850e-47 |
Msa0168950 | Msa0839900 | 0.807029 | 6.171400e-50 | -8.615850e-47 |
Msa0170550 | Msa0839900 | 0.837636 | 4.624546e-57 | -8.615850e-47 |
Msa0173610 | Msa0839900 | 0.802371 | 5.791108e-49 | -8.615850e-47 |
Msa0181010 | Msa0839900 | 0.803992 | 2.674675e-49 | -8.615850e-47 |
Msa0181380 | Msa0839900 | 0.807206 | 5.660314e-50 | -8.615850e-47 |
Msa0195850 | Msa0839900 | 0.821584 | 3.735766e-53 | -8.615850e-47 |
Msa0196620 | Msa0839900 | 0.831870 | 1.306240e-55 | -8.615850e-47 |
Msa0203330 | Msa0839900 | 0.809549 | 1.790920e-50 | -8.615850e-47 |
Msa0206970 | Msa0839900 | 0.817093 | 3.942798e-52 | -8.615850e-47 |
Msa0216900 | Msa0839900 | 0.836790 | 7.612948e-57 | -8.615850e-47 |
Msa0217300 | Msa0839900 | 0.801668 | 8.076511e-49 | -8.615850e-47 |
Msa0224700 | Msa0839900 | 0.823099 | 1.661793e-53 | -8.615850e-47 |
Msa0224980 | Msa0839900 | 0.820933 | 5.278187e-53 | -8.615850e-47 |
Msa0225030 | Msa0839900 | 0.819567 | 1.085185e-52 | -8.615850e-47 |
Msa0227960 | Msa0839900 | 0.809297 | 2.028898e-50 | -8.615850e-47 |
Msa0231180 | Msa0839900 | 0.826476 | 2.657082e-54 | -8.615850e-47 |
Msa0232160 | Msa0839900 | 0.816883 | 4.396300e-52 | -8.615850e-47 |
Msa0234930 | Msa0839900 | 0.845919 | 3.006596e-59 | -8.615850e-47 |
Msa0236350 | Msa0839900 | 0.806273 | 8.912650e-50 | -8.615850e-47 |
Msa0369770 | Msa0839900 | 0.824439 | 8.066038e-54 | -8.615850e-47 |
Msa0370180 | Msa0839900 | 0.806633 | 7.482991e-50 | -8.615850e-47 |
Msa0371050 | Msa0839900 | 0.864029 | 1.631075e-64 | -8.615850e-47 |
Msa0371640 | Msa0839900 | 0.808615 | 2.839676e-50 | -8.615850e-47 |
Msa0374840 | Msa0839900 | 0.830606 | 2.672177e-55 | -8.615850e-47 |
Msa0375100 | Msa0839900 | 0.831254 | 1.852430e-55 | -8.615850e-47 |
Msa0376760 | Msa0839900 | 0.819611 | 1.060717e-52 | -8.615850e-47 |
Msa0380390 | Msa0839900 | 0.815075 | 1.113050e-51 | -8.615850e-47 |
Msa0380440 | Msa0839900 | 0.832005 | 1.209882e-55 | -8.615850e-47 |
Msa0380470 | Msa0839900 | 0.806814 | 6.851761e-50 | -8.615850e-47 |
Msa0388000 | Msa0839900 | 0.806755 | 7.051388e-50 | -8.615850e-47 |
Msa0394330 | Msa0839900 | 0.829697 | 4.452842e-55 | -8.615850e-47 |
Msa0399180 | Msa0839900 | 0.802957 | 4.383977e-49 | -8.615850e-47 |
Msa0403670 | Msa0839900 | 0.820074 | 8.311880e-53 | -8.615850e-47 |
Msa0404840 | Msa0839900 | 0.844370 | 7.882799e-59 | -8.615850e-47 |
Msa0405040 | Msa0839900 | 0.808065 | 3.719145e-50 | -8.615850e-47 |
Msa0415060 | Msa0839900 | 0.813958 | 1.966415e-51 | -8.615850e-47 |
Msa0416430 | Msa0839900 | 0.807103 | 5.952648e-50 | -8.615850e-47 |
Msa0417140 | Msa0839900 | 0.817760 | 2.789484e-52 | -8.615850e-47 |
Msa0420100 | Msa0839900 | 0.817691 | 2.892229e-52 | -8.615850e-47 |
Msa0421790 | Msa0839900 | 0.819962 | 8.817285e-53 | -8.615850e-47 |
Msa0429560 | Msa0839900 | 0.817867 | 2.638505e-52 | -8.615850e-47 |
Msa0431310 | Msa0839900 | 0.817428 | 3.314094e-52 | -8.615850e-47 |
Msa0436310 | Msa0839900 | 0.851122 | 1.089929e-60 | -8.615850e-47 |
Msa0436430 | Msa0839900 | 0.801997 | 6.913933e-49 | -8.615850e-47 |
Msa0438990 | Msa0839900 | 0.827215 | 1.769204e-54 | -8.615850e-47 |
Msa0439130 | Msa0839900 | 0.811125 | 8.187112e-51 | -8.615850e-47 |
Msa0446480 | Msa0839900 | 0.821367 | 4.193227e-53 | -8.615850e-47 |
Msa0449030 | Msa0839900 | 0.811092 | 8.322003e-51 | -8.615850e-47 |
Msa0450830 | Msa0839900 | 0.815386 | 9.496292e-52 | -8.615850e-47 |
Msa0450860 | Msa0839900 | 0.805119 | 1.557001e-49 | -8.615850e-47 |
Msa0457600 | Msa0839900 | 0.802371 | 5.792144e-49 | -8.615850e-47 |
Msa0463980 | Msa0839900 | 0.829483 | 5.018515e-55 | -8.615850e-47 |
Msa0467890 | Msa0839900 | 0.834297 | 3.251611e-56 | -8.615850e-47 |
Msa0467970 | Msa0839900 | 0.835541 | 1.579983e-56 | -8.615850e-47 |
Msa0467980 | Msa0839900 | 0.817832 | 2.687325e-52 | -8.615850e-47 |
Msa0470850 | Msa0839900 | 0.803061 | 4.171774e-49 | -8.615850e-47 |
Msa0471700 | Msa0839900 | 0.818464 | 1.934013e-52 | -8.615850e-47 |
Msa0475130 | Msa0839900 | 0.814139 | 1.793343e-51 | -8.615850e-47 |
Msa0255100 | Msa0839900 | 0.809246 | 2.079944e-50 | -8.615850e-47 |
Msa0259390 | Msa0839900 | 0.805452 | 1.326089e-49 | -8.615850e-47 |
Msa0266100 | Msa0839900 | 0.828984 | 6.633168e-55 | -8.615850e-47 |
Msa0268170 | Msa0839900 | 0.800512 | 1.391967e-48 | -8.615850e-47 |
Msa0268550 | Msa0839900 | 0.809764 | 1.610312e-50 | -8.615850e-47 |
Msa0269050 | Msa0839900 | 0.810700 | 1.011865e-50 | -8.615850e-47 |
Msa0273270 | Msa0839900 | 0.844769 | 6.155921e-59 | -8.615850e-47 |
Msa0275260 | Msa0839900 | 0.819516 | 1.114762e-52 | -8.615850e-47 |
Msa0284980 | Msa0839900 | 0.826236 | 3.030119e-54 | -8.615850e-47 |
Msa0285710 | Msa0839900 | 0.810903 | 9.146737e-51 | -8.615850e-47 |
Msa0288300 | Msa0839900 | 0.826421 | 2.737735e-54 | -8.615850e-47 |
Msa0288350 | Msa0839900 | 0.827559 | 1.463026e-54 | -8.615850e-47 |
Msa0288360 | Msa0839900 | 0.828543 | 8.478737e-55 | -8.615850e-47 |
Msa0290040 | Msa0839900 | 0.820417 | 6.937180e-53 | -8.615850e-47 |
Msa0296100 | Msa0839900 | 0.864459 | 1.198061e-64 | -8.615850e-47 |
Msa0303780 | Msa0839900 | 0.818081 | 2.360558e-52 | -8.615850e-47 |
Msa0305810 | Msa0839900 | 0.838575 | 2.651444e-57 | -8.615850e-47 |
Msa0307490 | Msa0839900 | 0.810011 | 1.424912e-50 | -8.615850e-47 |
Msa0307750 | Msa0839900 | 0.815816 | 7.616310e-52 | -8.615850e-47 |
Msa0310270 | Msa0839900 | 0.801831 | 7.479598e-49 | -8.615850e-47 |
Msa0313550 | Msa0839900 | 0.823614 | 1.259616e-53 | -8.615850e-47 |
Msa0315760 | Msa0839900 | 0.810260 | 1.259056e-50 | -8.615850e-47 |
Msa0316330 | Msa0839900 | 0.803163 | 3.974385e-49 | -8.615850e-47 |
Msa0321230 | Msa0839900 | 0.801584 | 8.405274e-49 | -8.615850e-47 |
Msa0334480 | Msa0839900 | 0.837511 | 4.977451e-57 | -8.615850e-47 |
Msa0335740 | Msa0839900 | 0.800889 | 1.166275e-48 | -8.615850e-47 |
Msa0341710 | Msa0839900 | 0.828001 | 1.145941e-54 | -8.615850e-47 |
Msa0355590 | Msa0839900 | 0.812880 | 3.393104e-51 | -8.615850e-47 |
Msa0485350 | Msa0839900 | 0.833245 | 5.957282e-56 | -8.615850e-47 |
Msa0497060 | Msa0839900 | 0.827701 | 1.352871e-54 | -8.615850e-47 |
Msa0498090 | Msa0839900 | 0.809732 | 1.635915e-50 | -8.615850e-47 |
Msa0498320 | Msa0839900 | 0.809725 | 1.641640e-50 | -8.615850e-47 |
Msa0500580 | Msa0839900 | 0.808217 | 3.451472e-50 | -8.615850e-47 |
Msa0506740 | Msa0839900 | 0.800714 | 1.266301e-48 | -8.615850e-47 |
Msa0508620 | Msa0839900 | 0.825900 | 3.641975e-54 | -8.615850e-47 |
Msa0508660 | Msa0839900 | 0.826077 | 3.307059e-54 | -8.615850e-47 |
Msa0509530 | Msa0839900 | 0.825124 | 5.560521e-54 | -8.615850e-47 |
Msa0510540 | Msa0839900 | 0.801868 | 7.348019e-49 | -8.615850e-47 |
Msa0511930 | Msa0839900 | 0.800450 | 1.432939e-48 | -8.615850e-47 |
Msa0514280 | Msa0839900 | 0.820306 | 7.354272e-53 | -8.615850e-47 |
Msa0515420 | Msa0839900 | 0.806587 | 7.649729e-50 | -8.615850e-47 |
Msa0520450 | Msa0839900 | 0.802374 | 5.781774e-49 | -8.615850e-47 |
Msa0524020 | Msa0839900 | 0.839568 | 1.466239e-57 | -8.615850e-47 |
Msa0527420 | Msa0839900 | 0.826134 | 3.203806e-54 | -8.615850e-47 |
Msa0544780 | Msa0839900 | 0.814246 | 1.699120e-51 | -8.615850e-47 |
Msa0550280 | Msa0839900 | 0.807961 | 3.913770e-50 | -8.615850e-47 |
Msa0552920 | Msa0839900 | 0.822238 | 2.636793e-53 | -8.615850e-47 |
Msa0555210 | Msa0839900 | 0.805480 | 1.308089e-49 | -8.615850e-47 |
Msa0557770 | Msa0839900 | 0.815696 | 8.098711e-52 | -8.615850e-47 |
Msa0562040 | Msa0839900 | 0.807782 | 4.271689e-50 | -8.615850e-47 |
Msa0565930 | Msa0839900 | 0.801498 | 8.753274e-49 | -8.615850e-47 |
Msa0571070 | Msa0839900 | 0.808600 | 2.859990e-50 | -8.615850e-47 |
Msa0574230 | Msa0839900 | 0.800206 | 1.606707e-48 | -8.615850e-47 |
Msa0574450 | Msa0839900 | 0.816469 | 5.442496e-52 | -8.615850e-47 |
Msa0577140 | Msa0839900 | 0.813162 | 2.942837e-51 | -8.615850e-47 |
Msa0577350 | Msa0839900 | 0.805257 | 1.456644e-49 | -8.615850e-47 |
Msa0577910 | Msa0839900 | 0.821822 | 3.291103e-53 | -8.615850e-47 |
Msa0578400 | Msa0839900 | 0.806188 | 9.284964e-50 | -8.615850e-47 |
Msa0582820 | Msa0839900 | 0.806907 | 6.547687e-50 | -8.615850e-47 |
Msa0583810 | Msa0839900 | 0.851762 | 7.185250e-61 | -8.615850e-47 |
Msa0600940 | Msa0839900 | 0.806543 | 7.816741e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0839900 | MtrunA17_Chr5g0408591 | 97.496 | 559 | 13 | 1 | 1 | 559 | 1 | 558 | 0.0 | 1123 |
Msa0839900 | MtrunA17_Chr4g0038651 | 47.383 | 363 | 183 | 3 | 117 | 471 | 86 | 448 | 1.79e-112 | 346 |
Msa0839900 | MtrunA17_Chr7g0240501 | 46.094 | 384 | 196 | 2 | 102 | 474 | 168 | 551 | 7.10e-112 | 347 |
Msa0839900 | MtrunA17_Chr5g0436141 | 45.812 | 382 | 196 | 3 | 120 | 490 | 84 | 465 | 1.66e-109 | 338 |
Msa0839900 | MtrunA17_Chr3g0112731 | 45.337 | 386 | 200 | 4 | 114 | 488 | 96 | 481 | 2.28e-109 | 339 |
Msa0839900 | MtrunA17_Chr4g0008771 | 46.832 | 363 | 187 | 2 | 118 | 474 | 96 | 458 | 1.81e-106 | 330 |
Msa0839900 | MtrunA17_Chr4g0004771 | 45.682 | 359 | 176 | 6 | 118 | 471 | 90 | 434 | 4.40e-104 | 323 |
Msa0839900 | MtrunA17_Chr2g0331631 | 45.787 | 356 | 182 | 5 | 118 | 471 | 86 | 432 | 4.51e-102 | 318 |
Msa0839900 | MtrunA17_Chr8g0348921 | 44.000 | 375 | 185 | 4 | 117 | 471 | 96 | 465 | 6.53e-100 | 310 |
Msa0839900 | MtrunA17_Chr6g0485861 | 45.179 | 363 | 187 | 6 | 122 | 482 | 100 | 452 | 2.58e-99 | 311 |
Msa0839900 | MtrunA17_Chr7g0247761 | 38.849 | 417 | 187 | 5 | 118 | 471 | 113 | 524 | 7.87e-86 | 276 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0839900 | AT1G31650.1 | 60.976 | 574 | 192 | 9 | 1 | 547 | 1 | 569 | 0.0 | 648 |
Msa0839900 | AT1G31650.2 | 61.538 | 546 | 180 | 8 | 27 | 547 | 1 | 541 | 0.0 | 619 |
Msa0839900 | AT4G38430.1 | 47.802 | 364 | 181 | 3 | 117 | 471 | 89 | 452 | 6.03e-112 | 344 |
Msa0839900 | AT5G02010.1 | 46.631 | 371 | 187 | 3 | 117 | 478 | 69 | 437 | 1.40e-109 | 338 |
Msa0839900 | AT5G05940.1 | 44.615 | 390 | 201 | 3 | 114 | 488 | 98 | 487 | 4.40e-109 | 339 |
Msa0839900 | AT4G00460.2 | 41.667 | 444 | 213 | 9 | 50 | 471 | 47 | 466 | 5.83e-103 | 319 |
Msa0839900 | AT4G00460.4 | 41.667 | 444 | 213 | 9 | 50 | 471 | 47 | 466 | 5.83e-103 | 319 |
Msa0839900 | AT3G24620.1 | 43.443 | 366 | 197 | 3 | 115 | 479 | 82 | 438 | 2.18e-100 | 314 |
Msa0839900 | AT1G79860.1 | 45.378 | 357 | 182 | 6 | 117 | 471 | 91 | 436 | 3.20e-100 | 313 |
Msa0839900 | AT4G13240.1 | 44.875 | 361 | 189 | 4 | 115 | 474 | 71 | 422 | 2.81e-99 | 311 |
Msa0839900 | AT1G01700.1 | 43.669 | 387 | 194 | 5 | 99 | 471 | 102 | 478 | 4.27e-98 | 306 |
Msa0839900 | AT3G16130.1 | 41.860 | 387 | 211 | 5 | 97 | 480 | 71 | 446 | 2.44e-95 | 301 |
Msa0839900 | AT5G05940.2 | 43.567 | 342 | 181 | 2 | 114 | 443 | 98 | 439 | 1.06e-94 | 298 |
Msa0839900 | AT1G52240.1 | 43.646 | 362 | 191 | 5 | 114 | 474 | 100 | 449 | 6.83e-94 | 297 |
Msa0839900 | AT1G01700.4 | 38.085 | 470 | 223 | 8 | 54 | 471 | 55 | 508 | 1.30e-91 | 291 |
Msa0839900 | AT3G55660.1 | 42.700 | 363 | 199 | 4 | 115 | 468 | 104 | 466 | 3.10e-91 | 291 |
Msa0839900 | AT5G19560.1 | 43.767 | 361 | 193 | 4 | 115 | 473 | 41 | 393 | 1.25e-88 | 282 |
Msa0839900 | AT5G19560.5 | 43.767 | 361 | 193 | 4 | 115 | 473 | 41 | 393 | 1.25e-88 | 282 |
Msa0839900 | AT5G19560.4 | 43.767 | 361 | 193 | 4 | 115 | 473 | 60 | 412 | 3.54e-88 | 281 |
Msa0839900 | AT2G45890.1 | 41.711 | 374 | 193 | 5 | 115 | 471 | 90 | 455 | 4.69e-87 | 277 |
Msa0839900 | AT1G01700.3 | 39.329 | 417 | 208 | 9 | 54 | 441 | 55 | 455 | 8.72e-83 | 266 |
Msa0839900 | AT4G00460.3 | 42.216 | 334 | 168 | 5 | 155 | 471 | 8 | 333 | 1.05e-80 | 256 |
Msa0839900 | AT3G55660.2 | 41.018 | 334 | 188 | 4 | 115 | 439 | 104 | 437 | 9.07e-80 | 257 |
Msa0839900 | AT5G19560.2 | 42.202 | 327 | 179 | 4 | 115 | 439 | 60 | 378 | 1.90e-74 | 241 |
Msa0839900 | AT4G00460.1 | 42.907 | 289 | 134 | 5 | 50 | 323 | 47 | 319 | 1.05e-65 | 217 |
Msa0839900 | AT1G01700.5 | 41.667 | 288 | 139 | 4 | 54 | 323 | 55 | 331 | 7.10e-63 | 211 |
Msa0839900 | AT1G01700.2 | 41.667 | 288 | 139 | 4 | 54 | 323 | 55 | 331 | 7.10e-63 | 211 |
Msa0839900 | AT5G19560.3 | 40.449 | 267 | 149 | 4 | 209 | 473 | 5 | 263 | 2.81e-51 | 180 |
Find 114 sgRNAs with CRISPR-Local
Find 440 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACAGCTTCCAATTTATTAA+TGG | 0.226323 | 5_4:+15304168 | None:intergenic |
CCTTGAGACCATTAATAAAT+TGG | 0.239944 | 5_4:-15304176 | Msa0839900:CDS |
TGATAAACTTGAGTTATTAT+TGG | 0.246352 | 5_4:-15304050 | Msa0839900:CDS |
TCCTCAAGCAAAGATGCTTT+TGG | 0.264241 | 5_4:-15306058 | Msa0839900:CDS |
TTGACAGCTGAATCAACTTC+TGG | 0.292107 | 5_4:-15304244 | Msa0839900:CDS |
TTGTTATCTCTGTAGGATAT+TGG | 0.303057 | 5_4:-15303765 | Msa0839900:intron |
GAAGCGTATTCCAGAGTTCT+TGG | 0.321753 | 5_4:-15303729 | Msa0839900:CDS |
AAGAAAGAGGTTGGTTCATC+AGG | 0.325300 | 5_4:-15304662 | Msa0839900:CDS |
AAGAAATGTTTGAGGAAGAT+TGG | 0.333774 | 5_4:+15303985 | None:intergenic |
ACTGTTTCCTACAAACTATA+TGG | 0.334192 | 5_4:-15305224 | Msa0839900:CDS |
ATTTGGCAGCCTTGAATACT+TGG | 0.340330 | 5_4:+15304626 | None:intergenic |
CTGCATAACAATGCAATCTA+AGG | 0.341741 | 5_4:-15311845 | Msa0839900:intron |
CTCTTTCTTTCTTCAGATAG+AGG | 0.341999 | 5_4:+15305274 | None:intergenic |
TCAGGAATTATGACATATAA+TGG | 0.343998 | 5_4:-15306187 | Msa0839900:intron |
TCAGAGATATTATTTATTCC+AGG | 0.347750 | 5_4:+15303621 | None:intergenic |
TTACTTGGTGAAGATGTTAC+TGG | 0.361690 | 5_4:-15305872 | Msa0839900:CDS |
CAATGGTGAAAACAGAGTTT+TGG | 0.364768 | 5_4:-15304795 | Msa0839900:CDS |
GAGCAAATGGCGAAGAGAAA+TGG | 0.382512 | 5_4:-15305254 | Msa0839900:CDS |
GTGTAGCTATTATCACATCT+TGG | 0.389486 | 5_4:+15303481 | None:intergenic |
ATGAACCAACCTCTTTCTTT+CGG | 0.392462 | 5_4:+15304666 | None:intergenic |
GGATATTGGACATTCCATTC+TGG | 0.394307 | 5_4:-15303751 | Msa0839900:CDS |
CAAAGTGTTTAACAATGAAA+AGG | 0.400663 | 5_4:-15306024 | Msa0839900:CDS |
GATGCTGCTAAAGTTCAATA+TGG | 0.402749 | 5_4:-15303962 | Msa0839900:CDS |
TAAGCATAGAGTCCAACTTC+TGG | 0.406157 | 5_4:+15305014 | None:intergenic |
CACACTCATGTCTTTCCCTT+CGG | 0.412875 | 5_4:+15304750 | None:intergenic |
TGTAGCTATTATCACATCTT+GGG | 0.415683 | 5_4:+15303482 | None:intergenic |
TGAATGTCTGCACGAGCTTT+AGG | 0.436123 | 5_4:+15305055 | None:intergenic |
AATCACCGGTTCGAACTTCA+TGG | 0.438603 | 5_4:-15304102 | Msa0839900:CDS |
AGAAATGTTTGAGGAAGATT+GGG | 0.439291 | 5_4:+15303986 | None:intergenic |
AGAACTATGGAACAAGTTAC+TGG | 0.440000 | 5_4:-15304127 | Msa0839900:CDS |
ATGAACAAGGACTTGAAGAA+TGG | 0.447540 | 5_4:-15305997 | Msa0839900:CDS |
AGCTCAACCATATAGTTTGT+AGG | 0.449752 | 5_4:+15305217 | None:intergenic |
AGTTTATCAGCTTCTGACAT+AGG | 0.450031 | 5_4:+15304064 | None:intergenic |
TGGCTTCAATATCTGAATGT+TGG | 0.456977 | 5_4:+15305918 | None:intergenic |
AGATGTTACTGGAGGAACTA+AGG | 0.464313 | 5_4:-15305861 | Msa0839900:CDS |
AGCAGAACAAGTAGAGGAGA+TGG | 0.465943 | 5_4:-15306121 | Msa0839900:CDS |
CTGAAGAAAGAAAGAGCAAA+TGG | 0.467672 | 5_4:-15305267 | Msa0839900:CDS |
GGTCTCAAGGGCCATATGTT+CGG | 0.469228 | 5_4:+15304189 | None:intergenic |
AAAGTGTTTAACAATGAAAA+GGG | 0.471202 | 5_4:-15306023 | Msa0839900:CDS |
TAAGGGCATCACTACAGCTT+TGG | 0.471817 | 5_4:-15305843 | Msa0839900:CDS |
AACTCACTAAGTTGCTCCCC+TGG | 0.474068 | 5_4:-15303639 | Msa0839900:CDS |
CAATTTGAAATCCGAACATA+TGG | 0.474139 | 5_4:-15304200 | Msa0839900:CDS |
AATGCCATCACAAACTTGTC+AGG | 0.477719 | 5_4:-15305812 | Msa0839900:intron |
GAGTCCAACTTCTGGAGTGC+TGG | 0.477913 | 5_4:+15305022 | None:intergenic |
TGAACAAGGACTTGAAGAAT+GGG | 0.481493 | 5_4:-15305996 | Msa0839900:CDS |
TCTTCCAGCACTCCAGAAGT+TGG | 0.489929 | 5_4:-15305026 | Msa0839900:CDS |
GGCTAAATTTCCAAGAACTC+TGG | 0.491194 | 5_4:+15303719 | None:intergenic |
GGTGGTACGCCAAGTATTCA+AGG | 0.491614 | 5_4:-15304635 | Msa0839900:CDS |
CCAATTTATTAATGGTCTCA+AGG | 0.492231 | 5_4:+15304176 | None:intergenic |
GAGATGTTTAGAATGAAGAA+AGG | 0.494814 | 5_4:-15310561 | Msa0839900:CDS |
TAAATAATATCTCTGAAACT+TGG | 0.499561 | 5_4:-15303614 | Msa0839900:CDS |
GTTTATCAGCTTCTGACATA+GGG | 0.501172 | 5_4:+15304065 | None:intergenic |
TGCCAATGGTAGAATCTTTG+AGG | 0.504782 | 5_4:-15305173 | Msa0839900:intron |
AGTTTGTTAGAGCTTAACTT+TGG | 0.505063 | 5_4:+15303120 | None:intergenic |
GAGGGAGGAAGCAGGACCGA+AGG | 0.507585 | 5_4:-15304766 | Msa0839900:CDS |
ACAGGATGCACTTGATTCAA+TGG | 0.509215 | 5_4:-15304812 | Msa0839900:intron |
CCTTGTGCAGTTCTTGTCCA+AGG | 0.510155 | 5_4:+15304269 | None:intergenic |
GCAGCATCAAGAAATGTTTG+AGG | 0.512844 | 5_4:+15303977 | None:intergenic |
TGATACCGAAAGAAAGAGGT+TGG | 0.513523 | 5_4:-15304671 | Msa0839900:CDS |
CAATTTATTAATGGTCTCAA+GGG | 0.515889 | 5_4:+15304177 | None:intergenic |
CAGAGATATTATTTATTCCA+GGG | 0.516460 | 5_4:+15303622 | None:intergenic |
CTCGTTGAAAGAGAGAACTA+TGG | 0.524461 | 5_4:-15304140 | Msa0839900:CDS |
CACCAAGCAGGAGTAGTGTC+TGG | 0.526331 | 5_4:-15303461 | Msa0839900:CDS |
AAAGTATGGACTTACTCTCT+TGG | 0.527670 | 5_4:+15310490 | None:intergenic |
GACTAGCTTGCTGCAGCAGA+GGG | 0.530037 | 5_4:-15310539 | Msa0839900:CDS |
TACCTCAAAGATTCTACCAT+TGG | 0.531632 | 5_4:+15305171 | None:intergenic |
CTCTATGTTGCAGTCTGGAA+AGG | 0.532305 | 5_4:-15304296 | Msa0839900:intron |
TTCAGCATATTGTCTAGAAT+AGG | 0.545508 | 5_4:-15303696 | Msa0839900:CDS |
CACCAGACACTACTCCTGCT+TGG | 0.546870 | 5_4:+15303459 | None:intergenic |
AAAGACCATGAAGTTCGAAC+CGG | 0.547808 | 5_4:+15304097 | None:intergenic |
TCTGGAATACGCTTCCAGAA+TGG | 0.548749 | 5_4:+15303737 | None:intergenic |
TAATATCTCTGAAACTTGGA+TGG | 0.549387 | 5_4:-15303610 | Msa0839900:CDS |
GAATGTTGGATTGCATAAGA+AGG | 0.550363 | 5_4:+15305932 | None:intergenic |
AAACAATCAGTCTTATGAAG+AGG | 0.554003 | 5_4:-15306146 | Msa0839900:CDS |
TTTCTGATACCGAAAGAAAG+AGG | 0.554133 | 5_4:-15304675 | Msa0839900:CDS |
AGAGATATTATTTATTCCAG+GGG | 0.565546 | 5_4:+15303623 | None:intergenic |
TATTAGAGATGCACTTGCAA+AGG | 0.565718 | 5_4:-15304560 | Msa0839900:intron |
GATGTTACTGGAGGAACTAA+GGG | 0.566443 | 5_4:-15305860 | Msa0839900:CDS |
AGAAAGAGGTTGGTTCATCA+GGG | 0.566470 | 5_4:-15304661 | Msa0839900:CDS |
AGGGAGGAAGCAGGACCGAA+GGG | 0.567526 | 5_4:-15304765 | Msa0839900:CDS |
TTATGCAGTGAAAAGTTCAA+TGG | 0.568269 | 5_4:+15311860 | None:intergenic |
TCCAAAAGCATCTTTGCTTG+AGG | 0.568575 | 5_4:+15306057 | None:intergenic |
TGATAATAGCTACACCAAGC+AGG | 0.570801 | 5_4:-15303473 | Msa0839900:CDS |
GTTCTTTATTGACAATGAAG+AGG | 0.574025 | 5_4:-15303272 | Msa0839900:three_prime_UTR |
TCTCTAATAACCGTTGGCAC+AGG | 0.574892 | 5_4:+15304574 | None:intergenic |
CAAAAGATGAACAAAGCAGA+TGG | 0.584707 | 5_4:-15303558 | Msa0839900:CDS |
GGTATGGTGAGGGAGGAAGC+AGG | 0.588600 | 5_4:-15304774 | Msa0839900:CDS |
GCTTGAAATGCCTGTGCCAA+CGG | 0.588660 | 5_4:-15304584 | Msa0839900:CDS |
CAGTCTGGAAAGGCAAACCT+TGG | 0.594632 | 5_4:-15304286 | Msa0839900:CDS |
ACAAGTTACTGGCAAATCAC+CGG | 0.594634 | 5_4:-15304116 | Msa0839900:CDS |
GAGGAAAGCAGAACAAGTAG+AGG | 0.594944 | 5_4:-15306127 | Msa0839900:CDS |
GGACTAGCTTGCTGCAGCAG+AGG | 0.599307 | 5_4:-15310540 | Msa0839900:CDS |
TGCTAAAGTTCAATATGGCA+AGG | 0.601273 | 5_4:-15303957 | Msa0839900:intron |
AATAGGAGATATATTACAAG+AGG | 0.605594 | 5_4:-15303679 | Msa0839900:CDS |
TATTCTAGACAATATGCTGA+AGG | 0.609235 | 5_4:+15303698 | None:intergenic |
GAGGTTGGTTCATCAGGGAA+AGG | 0.610824 | 5_4:-15304656 | Msa0839900:CDS |
TATCTCTGAAACTTGGATGG+TGG | 0.612314 | 5_4:-15303607 | Msa0839900:CDS |
AGAACAAGTAGAGGAGATGG+AGG | 0.618149 | 5_4:-15306118 | Msa0839900:CDS |
CCTTGGACAAGAACTGCACA+AGG | 0.620947 | 5_4:-15304269 | Msa0839900:CDS |
AATGGCGAAGAGAAATGGAC+TGG | 0.621786 | 5_4:-15305249 | Msa0839900:CDS |
AGTGCATCTCTAATAACCGT+TGG | 0.622837 | 5_4:+15304568 | None:intergenic |
CAAGCTTAAGCATATAGCAA+TGG | 0.623474 | 5_4:+15311889 | None:intergenic |
GCTAAGCAAAACAATGCCAA+TGG | 0.628095 | 5_4:-15305187 | Msa0839900:CDS |
AGTGAAAAGTTCAATGGTGA+TGG | 0.637154 | 5_4:+15311866 | None:intergenic |
GTTGGTTCATCAGGGAAAGG+TGG | 0.638880 | 5_4:-15304653 | Msa0839900:CDS |
CATACCTGACAAGTTTGTGA+TGG | 0.644339 | 5_4:+15305808 | None:intergenic |
TAACAAATATAGTTGTACTG+TGG | 0.647274 | 5_4:+15310592 | None:intergenic |
TGTCTGGTGCATTAGTAGAG+AGG | 0.658828 | 5_4:-15303445 | Msa0839900:CDS |
CTTGGTGAAGATGTTACTGG+AGG | 0.664082 | 5_4:-15305869 | Msa0839900:CDS |
ATGAAAAGGGAAGATGAACA+AGG | 0.671938 | 5_4:-15306010 | Msa0839900:CDS |
GTGTGCGGCATAGTAAAAGA+TGG | 0.678764 | 5_4:-15304732 | Msa0839900:CDS |
TGCGGCATAGTAAAAGATGG+TGG | 0.684737 | 5_4:-15304729 | Msa0839900:CDS |
AAGGGAAAGACATGAGTGTG+CGG | 0.684788 | 5_4:-15304747 | Msa0839900:CDS |
GCTGTAAAAGTGTTTCAGCA+CGG | 0.690145 | 5_4:+15304026 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTATAAATAAATTCATACA+CGG | + | chr5_4:15303612-15303631 | None:intergenic | 10.0% |
!!! | TTTAGAATAATACTATATTT+TGG | - | chr5_4:15304443-15304462 | Msa0839900:intron | 10.0% |
!! | AAATTATAATTCTTTGATAA+CGG | - | chr5_4:15305179-15305198 | Msa0839900:CDS | 10.0% |
!!! | TTTAATATTTAAGTTTACTA+TGG | - | chr5_4:15305646-15305665 | Msa0839900:intron | 10.0% |
!!! | AATTTTTATTTATTATCGTT+TGG | - | chr5_4:15305679-15305698 | Msa0839900:intron | 10.0% |
!! | AAGAAAAATATATGTATAAT+TGG | + | chr5_4:15306002-15306021 | None:intergenic | 10.0% |
!! | AATTTGTAATATTAAAATGT+GGG | + | chr5_4:15306837-15306856 | None:intergenic | 10.0% |
!! | AAATTTGTAATATTAAAATG+TGG | + | chr5_4:15306838-15306857 | None:intergenic | 10.0% |
!! | AAGTAATAAAATTCATAAAA+AGG | + | chr5_4:15307451-15307470 | None:intergenic | 10.0% |
!!! | TTTTATTTTAATTTCATGTT+TGG | + | chr5_4:15307969-15307988 | None:intergenic | 10.0% |
!! | TAATAAATATTTACCATTTA+TGG | + | chr5_4:15308074-15308093 | None:intergenic | 10.0% |
!! | TATATAATCTATAATCTATA+AGG | - | chr5_4:15308141-15308160 | Msa0839900:intron | 10.0% |
!!! | TATTTTATGAGTTTATATAA+TGG | - | chr5_4:15308881-15308900 | Msa0839900:intron | 10.0% |
!! | TTATAAATAAATTCATACAC+GGG | + | chr5_4:15303611-15303630 | None:intergenic | 15.0% |
!! | AACTTTAATCAAAATATGAT+TGG | + | chr5_4:15303640-15303659 | None:intergenic | 15.0% |
!! | TTGTGAAGATTAATTTAAAA+TGG | - | chr5_4:15303830-15303849 | Msa0839900:intron | 15.0% |
!!! | TGTGAAGATTAATTTAAAAT+GGG | - | chr5_4:15303831-15303850 | Msa0839900:intron | 15.0% |
!!! | TAATTTTATAATGAGACTTT+GGG | - | chr5_4:15303978-15303997 | Msa0839900:CDS | 15.0% |
!! | ACATATGATAATTAAAACAA+GGG | + | chr5_4:15304924-15304943 | None:intergenic | 15.0% |
!!! | TTTAATTATCATATGTGTTT+TGG | - | chr5_4:15304928-15304947 | Msa0839900:intron | 15.0% |
!!! | TTAATTATCATATGTGTTTT+GGG | - | chr5_4:15304929-15304948 | Msa0839900:intron | 15.0% |
!! | AACTTAAATATTAAATTCCA+TGG | + | chr5_4:15305641-15305660 | None:intergenic | 15.0% |
!!! | ATTTTAAAGTCAATTTGTTA+TGG | + | chr5_4:15305767-15305786 | None:intergenic | 15.0% |
!!! | TACATATATTTTTCTTACAA+TGG | - | chr5_4:15306006-15306025 | Msa0839900:CDS | 15.0% |
!!! | GTTTTGTTATTTCATAAATT+TGG | + | chr5_4:15306083-15306102 | None:intergenic | 15.0% |
!! | ATTATCATTATCAAAAACAA+AGG | + | chr5_4:15306697-15306716 | None:intergenic | 15.0% |
!! | ATTACAAATTTCTTACTATT+TGG | - | chr5_4:15306847-15306866 | Msa0839900:intron | 15.0% |
!! | TTTCTTTCTTTCTAATTATT+AGG | - | chr5_4:15306948-15306967 | Msa0839900:intron | 15.0% |
!!! | ATTTTGATCTTTTCATAAAA+AGG | + | chr5_4:15307672-15307691 | None:intergenic | 15.0% |
!!! | CTTTAATGTTTTTTTTTTCT+GGG | + | chr5_4:15307746-15307765 | None:intergenic | 15.0% |
!!! | ACTTTAATGTTTTTTTTTTC+TGG | + | chr5_4:15307747-15307766 | None:intergenic | 15.0% |
!! | AGAAAAAAAAAACATTAAAG+TGG | - | chr5_4:15307746-15307765 | Msa0839900:intron | 15.0% |
!!! | ACATTTTTTATAAAGGATAA+AGG | - | chr5_4:15308179-15308198 | Msa0839900:intron | 15.0% |
!!! | TAGTTTTTTTTTATGTCAAA+AGG | - | chr5_4:15308776-15308795 | Msa0839900:intron | 15.0% |
!!! | ATATTTATGATTTTCCAAAA+GGG | + | chr5_4:15308864-15308883 | None:intergenic | 15.0% |
!!! | AATATTTATGATTTTCCAAA+AGG | + | chr5_4:15308865-15308884 | None:intergenic | 15.0% |
!!! | ATTCATTTCTATTTTTCTTT+CGG | - | chr5_4:15309723-15309742 | Msa0839900:intron | 15.0% |
!! | TCAGATATAAAAAAAATCTA+TGG | + | chr5_4:15311707-15311726 | None:intergenic | 15.0% |
!!! | TTTTTTATACTGAAAGTTGA+TGG | - | chr5_4:15303342-15303361 | Msa0839900:three_prime_UTR | 20.0% |
!!! | AAGTTTTTCAAAAGTAAATG+AGG | + | chr5_4:15303434-15303453 | None:intergenic | 20.0% |
!! | TTTGATTAAAGTTCTTAGAA+TGG | - | chr5_4:15303647-15303666 | Msa0839900:CDS | 20.0% |
!! | TTGATTAAAGTTCTTAGAAT+GGG | - | chr5_4:15303648-15303667 | Msa0839900:CDS | 20.0% |
!! | TGTTAACTATTTGATTCTTA+TGG | - | chr5_4:15303690-15303709 | Msa0839900:CDS | 20.0% |
!! | GTTAACTATTTGATTCTTAT+GGG | - | chr5_4:15303691-15303710 | Msa0839900:CDS | 20.0% |
!! | AAGTCTCATTATAAAATTAC+AGG | + | chr5_4:15303977-15303996 | None:intergenic | 20.0% |
!!! | GTAATTTTATAATGAGACTT+TGG | - | chr5_4:15303977-15303996 | Msa0839900:CDS | 20.0% |
!! | GACATAGTTTAATAAAAGTA+TGG | + | chr5_4:15304624-15304643 | None:intergenic | 20.0% |
!!! | ATAAACCATAGTTTGTTTTA+AGG | - | chr5_4:15304719-15304738 | Msa0839900:CDS | 20.0% |
!!! | TAAACCATAGTTTGTTTTAA+GGG | - | chr5_4:15304720-15304739 | Msa0839900:CDS | 20.0% |
!!! | TATAACTTTTGCAACATTTA+AGG | + | chr5_4:15304825-15304844 | None:intergenic | 20.0% |
!! | CACATATGATAATTAAAACA+AGG | + | chr5_4:15304925-15304944 | None:intergenic | 20.0% |
!!! | AAAATTCAAAACACAACTTT+TGG | - | chr5_4:15304991-15305010 | Msa0839900:intron | 20.0% |
!!! | TTATTTCGACATTTTTTTGT+CGG | + | chr5_4:15305069-15305088 | None:intergenic | 20.0% |
!! | AAAAAAATGTCGAAATAACT+AGG | - | chr5_4:15305071-15305090 | Msa0839900:intron | 20.0% |
!!! | AATATTTTACTGTAGAGATT+TGG | - | chr5_4:15305278-15305297 | Msa0839900:CDS | 20.0% |
!! | TTAAATTTAAGTGACCAAAA+CGG | + | chr5_4:15305926-15305945 | None:intergenic | 20.0% |
!!! | TTTAAAATAGAGAAGATTTC+AGG | - | chr5_4:15305967-15305986 | Msa0839900:CDS | 20.0% |
!! | TTAAAATAGAGAAGATTTCA+GGG | - | chr5_4:15305968-15305987 | Msa0839900:CDS | 20.0% |
!!! | GTTTTTGATAATGATAATGA+AGG | - | chr5_4:15306699-15306718 | Msa0839900:intron | 20.0% |
!!! | CAATAATACCATATTTTTGA+AGG | - | chr5_4:15306730-15306749 | Msa0839900:intron | 20.0% |
!! | AAATTTCTTACTATTTGGAT+AGG | - | chr5_4:15306852-15306871 | Msa0839900:intron | 20.0% |
!! | TTTGTCTCATATAAAATGTA+AGG | - | chr5_4:15307047-15307066 | Msa0839900:intron | 20.0% |
!!! | GATCGTTAATTTATTAGTTT+AGG | - | chr5_4:15307613-15307632 | Msa0839900:intron | 20.0% |
!! | TTCATAAAAAGGTAAACAAA+GGG | + | chr5_4:15307661-15307680 | None:intergenic | 20.0% |
!! | TTTCATAAAAAGGTAAACAA+AGG | + | chr5_4:15307662-15307681 | None:intergenic | 20.0% |
!! | TTTACGTGGTTTATAATTAT+GGG | - | chr5_4:15308017-15308036 | Msa0839900:intron | 20.0% |
!!! | CTAGCATACATTTTTTATAA+AGG | - | chr5_4:15308172-15308191 | Msa0839900:intron | 20.0% |
!!! | TCTAGCATACATTTTTATAA+AGG | - | chr5_4:15308209-15308228 | Msa0839900:intron | 20.0% |
!!! | ACTTGATACAAACTTTTATA+CGG | + | chr5_4:15308437-15308456 | None:intergenic | 20.0% |
!!! | TAAATTATTTGCTTTGCTAT+TGG | + | chr5_4:15308533-15308552 | None:intergenic | 20.0% |
!!! | AATATATTCTTGCATTGTTT+TGG | - | chr5_4:15308720-15308739 | Msa0839900:intron | 20.0% |
!!! | TATTTATGATTTTCCAAAAG+GGG | + | chr5_4:15308863-15308882 | None:intergenic | 20.0% |
!!! | TTTATATAATGGAACATTTC+AGG | - | chr5_4:15308892-15308911 | Msa0839900:intron | 20.0% |
!!! | AAAGTGTTTAACAATGAAAA+GGG | - | chr5_4:15309074-15309093 | Msa0839900:intron | 20.0% |
!!! | CTTTGAAAATTTTTCTTTCA+TGG | + | chr5_4:15309202-15309221 | None:intergenic | 20.0% |
!!! | AATCATGTTAATTTTAGACT+AGG | + | chr5_4:15309460-15309479 | None:intergenic | 20.0% |
!!! | AAATTAACATGATTCGTTTT+AGG | - | chr5_4:15309466-15309485 | Msa0839900:intron | 20.0% |
!!! | TGACACTTTAAAAAAGATAA+AGG | - | chr5_4:15309654-15309673 | Msa0839900:intron | 20.0% |
!!! | AACAAAACTTTCTTATTTAG+TGG | + | chr5_4:15310003-15310022 | None:intergenic | 20.0% |
!!! | AAATAAGAAAGTTTTGTTCT+TGG | - | chr5_4:15310005-15310024 | Msa0839900:intron | 20.0% |
!! | AATAAATTCTAATGCATTGA+AGG | - | chr5_4:15310593-15310612 | Msa0839900:five_prime_UTR | 20.0% |
!! | TTTAGCAATAATAAGTTTGA+AGG | + | chr5_4:15310656-15310675 | None:intergenic | 20.0% |
!! | TAAATCAAATCATAATCACA+TGG | - | chr5_4:15310733-15310752 | Msa0839900:intron | 20.0% |
!! | TGATAAACTTGAGTTATTAT+TGG | - | chr5_4:15311047-15311066 | Msa0839900:intron | 20.0% |
!!! | TAAATAATATCTCTGAAACT+TGG | - | chr5_4:15311483-15311502 | Msa0839900:intron | 20.0% |
! | CAGAACAGTAAAAAATATAC+TGG | + | chr5_4:15303508-15303527 | None:intergenic | 25.0% |
!!! | CAGTATATTTTTTACTGTTC+TGG | - | chr5_4:15303506-15303525 | Msa0839900:CDS | 25.0% |
! | GTATGGCACATTATTAATTT+AGG | - | chr5_4:15303948-15303967 | Msa0839900:intron | 25.0% |
! | GAGAGAGAATAATAATTGAA+TGG | - | chr5_4:15304091-15304110 | Msa0839900:CDS | 25.0% |
! | ATTGATCGCTACAAAATTAA+GGG | + | chr5_4:15304204-15304223 | None:intergenic | 25.0% |
!!! | TACTATATTTTGGACATTGT+TGG | - | chr5_4:15304453-15304472 | Msa0839900:intron | 25.0% |
! | TAACAAATATAGTTGTACTG+TGG | + | chr5_4:15304508-15304527 | None:intergenic | 25.0% |
! | ATTTCCCTTAAAACAAACTA+TGG | + | chr5_4:15304727-15304746 | None:intergenic | 25.0% |
!!! | CTAGTACTTTTTTTATTGAG+AGG | + | chr5_4:15305041-15305060 | None:intergenic | 25.0% |
! | ATAAATGTGTCCTACAATAA+AGG | + | chr5_4:15305453-15305472 | None:intergenic | 25.0% |
! | TTGACATTCAAAAAAGATAG+TGG | - | chr5_4:15305558-15305577 | Msa0839900:intron | 25.0% |
! | AATGATACAATGAAATTCCA+TGG | - | chr5_4:15305621-15305640 | Msa0839900:intron | 25.0% |
!! | TTTGGAATTTCTTGTATATG+AGG | - | chr5_4:15305697-15305716 | Msa0839900:intron | 25.0% |
! | TTGGAATTTCTTGTATATGA+GGG | - | chr5_4:15305698-15305717 | Msa0839900:intron | 25.0% |
! | TTGTAATGATATCCACAAAA+AGG | - | chr5_4:15305811-15305830 | Msa0839900:intron | 25.0% |
!!! | TTGCAAATGAAATTTTAGTG+TGG | + | chr5_4:15305899-15305918 | None:intergenic | 25.0% |
!! | GGTCACTTAAATTTAAAGTA+AGG | - | chr5_4:15305930-15305949 | Msa0839900:CDS | 25.0% |
!! | CAAAGATGTTTACTGTTTTA+AGG | - | chr5_4:15306152-15306171 | Msa0839900:CDS | 25.0% |
! | TATCATGTTAGATGTGATAT+GGG | - | chr5_4:15306242-15306261 | Msa0839900:intron | 25.0% |
! | TTGATTTATATGAAGCAAGT+AGG | - | chr5_4:15306275-15306294 | Msa0839900:intron | 25.0% |
! | AGGCATAATAAAAACACTAA+TGG | + | chr5_4:15306383-15306402 | None:intergenic | 25.0% |
! | GTAAATTAGTCCAATTGATA+AGG | + | chr5_4:15306665-15306684 | None:intergenic | 25.0% |
! | TTTAGTGTCCTTCAAAAATA+TGG | + | chr5_4:15306741-15306760 | None:intergenic | 25.0% |
! | TTTCCTAAGTACATTGTTTA+AGG | - | chr5_4:15307085-15307104 | Msa0839900:intron | 25.0% |
! | ATTCCTTAAACAATGTACTT+AGG | + | chr5_4:15307091-15307110 | None:intergenic | 25.0% |
!!! | AACAAAGGTATATTGATTTG+GGG | + | chr5_4:15307289-15307308 | None:intergenic | 25.0% |
!!! | GAACAAAGGTATATTGATTT+GGG | + | chr5_4:15307290-15307309 | None:intergenic | 25.0% |
!! | TGAACAAAGGTATATTGATT+TGG | + | chr5_4:15307291-15307310 | None:intergenic | 25.0% |
! | TCTAATTATCGAATGAACAA+AGG | + | chr5_4:15307304-15307323 | None:intergenic | 25.0% |
! | CTTTACGTGGTTTATAATTA+TGG | - | chr5_4:15308016-15308035 | Msa0839900:intron | 25.0% |
! | CATGTTAAAGATTCCATAAA+TGG | - | chr5_4:15308058-15308077 | Msa0839900:intron | 25.0% |
!!! | GTTTAGTCATATGCTATTTT+TGG | - | chr5_4:15308660-15308679 | Msa0839900:intron | 25.0% |
!! | ACTATGTTCTAGACTATATT+TGG | - | chr5_4:15308803-15308822 | Msa0839900:intron | 25.0% |
! | TCAGGAATTATGACATATAA+TGG | - | chr5_4:15308910-15308929 | Msa0839900:intron | 25.0% |
!! | CAAAGTGTTTAACAATGAAA+AGG | - | chr5_4:15309073-15309092 | Msa0839900:intron | 25.0% |
! | TCTTTGACATAAAAATGTTG+AGG | + | chr5_4:15309141-15309160 | None:intergenic | 25.0% |
!! | AAATTTTCAAAGCTCTTACT+TGG | - | chr5_4:15309210-15309229 | Msa0839900:intron | 25.0% |
! | TTTAAAAACGTCAACATTGT+TGG | - | chr5_4:15309338-15309357 | Msa0839900:intron | 25.0% |
! | ATGAACGTTGAATTATACTA+TGG | + | chr5_4:15309558-15309577 | None:intergenic | 25.0% |
! | GATCATATAAGTACATAGAT+TGG | + | chr5_4:15309763-15309782 | None:intergenic | 25.0% |
! | ATCTTTACTAGCAACATATT+AGG | - | chr5_4:15310226-15310245 | Msa0839900:intron | 25.0% |
!! | TATTTGGATTATTTGTTGAC+AGG | - | chr5_4:15310267-15310286 | Msa0839900:intron | 25.0% |
!! | CACATTTTCATTGATAGATT+TGG | + | chr5_4:15310491-15310510 | None:intergenic | 25.0% |
! | AATCACATATTAAGTGTCTA+TGG | + | chr5_4:15310626-15310645 | None:intergenic | 25.0% |
! | TGACTATTTGATTATAACCT+AGG | - | chr5_4:15310697-15310716 | Msa0839900:intron | 25.0% |
! | CAATTTATTAATGGTCTCAA+GGG | + | chr5_4:15310923-15310942 | None:intergenic | 25.0% |
! | AACAGCTTCCAATTTATTAA+TGG | + | chr5_4:15310932-15310951 | None:intergenic | 25.0% |
! | AATAGGAGATATATTACAAG+AGG | - | chr5_4:15311418-15311437 | Msa0839900:intron | 25.0% |
! | AGAGATATTATTTATTCCAG+GGG | + | chr5_4:15311477-15311496 | None:intergenic | 25.0% |
! | CAGAGATATTATTTATTCCA+GGG | + | chr5_4:15311478-15311497 | None:intergenic | 25.0% |
! | TCAGAGATATTATTTATTCC+AGG | + | chr5_4:15311479-15311498 | None:intergenic | 25.0% |
!!! | TTTGTTCATCTTTTGAAGTA+AGG | + | chr5_4:15311534-15311553 | None:intergenic | 25.0% |
TTATGCAGTGAAAAGTTCAA+TGG | + | chr5_4:15303240-15303259 | None:intergenic | 30.0% | |
TCAAAAGTAAATGAGGATGA+AGG | + | chr5_4:15303427-15303446 | None:intergenic | 30.0% | |
ATTCATACACGGGAAAAAAA+AGG | + | chr5_4:15303601-15303620 | None:intergenic | 30.0% | |
! | TGGGTATGATCAATTCTTTT+TGG | - | chr5_4:15303667-15303686 | Msa0839900:CDS | 30.0% |
! | TTTTACTTTAATCGTGCTCA+TGG | - | chr5_4:15303867-15303886 | Msa0839900:intron | 30.0% |
!!! | TTACTTCCCTTATGCTTTTT+TGG | - | chr5_4:15303899-15303918 | Msa0839900:intron | 30.0% |
! | ATTTCGCCAAAAAAGCATAA+GGG | + | chr5_4:15303908-15303927 | None:intergenic | 30.0% |
TCGTATATGTTACAAACGTA+TGG | - | chr5_4:15303931-15303950 | Msa0839900:intron | 30.0% | |
TGGCACATTATTAATTTAGG+TGG | - | chr5_4:15303951-15303970 | Msa0839900:intron | 30.0% | |
! | TCCTTGGTGATTAATTGATT+TGG | - | chr5_4:15304004-15304023 | Msa0839900:CDS | 30.0% |
TCCAAATCAATTAATCACCA+AGG | + | chr5_4:15304008-15304027 | None:intergenic | 30.0% | |
! | GACGTAGATACCTTAATTTT+GGG | - | chr5_4:15304026-15304045 | Msa0839900:CDS | 30.0% |
!! | TCTCCTTTAAAATGCACTAA+AGG | + | chr5_4:15304075-15304094 | None:intergenic | 30.0% |
TTTAGATGAGAGAGAATGAA+TGG | - | chr5_4:15304127-15304146 | Msa0839900:CDS | 30.0% | |
AATGAATGGTTTAGAGAGAT+AGG | - | chr5_4:15304141-15304160 | Msa0839900:CDS | 30.0% | |
TTGATCGCTACAAAATTAAG+GGG | + | chr5_4:15304203-15304222 | None:intergenic | 30.0% | |
CATTGATCGCTACAAAATTA+AGG | + | chr5_4:15304205-15304224 | None:intergenic | 30.0% | |
! | CTTAATTTTGTAGCGATCAA+TGG | - | chr5_4:15304203-15304222 | Msa0839900:CDS | 30.0% |
GTACGTGAAATTAAATGCTT+AGG | - | chr5_4:15304301-15304320 | Msa0839900:intron | 30.0% | |
TTCGACATAAATGTATACTG+AGG | + | chr5_4:15304360-15304379 | None:intergenic | 30.0% | |
TGTCGAAATTTCATAAAGTG+TGG | - | chr5_4:15304373-15304392 | Msa0839900:intron | 30.0% | |
GTCGAAATTTCATAAAGTGT+GGG | - | chr5_4:15304374-15304393 | Msa0839900:intron | 30.0% | |
! | GAGATGTTTAGAATGAAGAA+AGG | - | chr5_4:15304536-15304555 | Msa0839900:intron | 30.0% |
! | TTTTATTGAGAGGTTGAGAT+AGG | + | chr5_4:15305031-15305050 | None:intergenic | 30.0% |
GTTGCATAAAACAATAGTGA+AGG | + | chr5_4:15305521-15305540 | None:intergenic | 30.0% | |
ATTTCTTGTATATGAGGGAA+TGG | - | chr5_4:15305703-15305722 | Msa0839900:intron | 30.0% | |
TACAAATTTGCGAGATAAAG+AGG | - | chr5_4:15306044-15306063 | Msa0839900:CDS | 30.0% | |
TTGAAGAGTGATGACATTTA+TGG | + | chr5_4:15306135-15306154 | None:intergenic | 30.0% | |
TCACATCTAACATGATAGAA+CGG | + | chr5_4:15306239-15306258 | None:intergenic | 30.0% | |
CTATCATGTTAGATGTGATA+TGG | - | chr5_4:15306241-15306260 | Msa0839900:intron | 30.0% | |
ATTTATATGAAGCAAGTAGG+AGG | - | chr5_4:15306278-15306297 | Msa0839900:intron | 30.0% | |
TGTTTCAAATCACAATCTGA+AGG | - | chr5_4:15306323-15306342 | Msa0839900:intron | 30.0% | |
!! | CACTCACAAAATTTAGTTTG+TGG | - | chr5_4:15306446-15306465 | Msa0839900:intron | 30.0% |
ATGATTCAATACTAGAGATC+AGG | + | chr5_4:15306584-15306603 | None:intergenic | 30.0% | |
! | GATCTCTAGTATTGAATCAT+TGG | - | chr5_4:15306584-15306603 | Msa0839900:intron | 30.0% |
! | GATTTAGCTCATATCTAACA+AGG | + | chr5_4:15306643-15306662 | None:intergenic | 30.0% |
TGAGCTAAATCCTTATCAAT+TGG | - | chr5_4:15306652-15306671 | Msa0839900:intron | 30.0% | |
ACTCAAATTCATGTTGAGAT+AGG | - | chr5_4:15306801-15306820 | Msa0839900:intron | 30.0% | |
! | ATTTTCCAAAACATAACAGC+AGG | - | chr5_4:15307238-15307257 | Msa0839900:intron | 30.0% |
AAAAAGGTAAACAAAGGGAA+AGG | + | chr5_4:15307656-15307675 | None:intergenic | 30.0% | |
CTTTAGTGTTTATAAGCTCA+TGG | - | chr5_4:15307783-15307802 | Msa0839900:intron | 30.0% | |
ATCTGTACTAACGTACTAAT+CGG | - | chr5_4:15307927-15307946 | Msa0839900:intron | 30.0% | |
TACAAAACATTGTCCTCTAA+AGG | - | chr5_4:15308092-15308111 | Msa0839900:intron | 30.0% | |
CATATTGATGTACTATTGCT+AGG | + | chr5_4:15308367-15308386 | None:intergenic | 30.0% | |
ATTCTATCACATCTCTATCA+CGG | + | chr5_4:15308476-15308495 | None:intergenic | 30.0% | |
AAGAATATATTCTCTGCTGT+TGG | + | chr5_4:15308711-15308730 | None:intergenic | 30.0% | |
! | AAACAATCAGTCTTATGAAG+AGG | - | chr5_4:15308951-15308970 | Msa0839900:intron | 30.0% |
AGTCAAGAGCTTAGAAAATT+CGG | + | chr5_4:15309365-15309384 | None:intergenic | 30.0% | |
ACTGTTTCCTACAAACTATA+TGG | - | chr5_4:15309873-15309892 | Msa0839900:intron | 30.0% | |
! | CTTTCTTATTTAGTGGCAAA+GGG | + | chr5_4:15309996-15310015 | None:intergenic | 30.0% |
! | ACTTTCTTATTTAGTGGCAA+AGG | + | chr5_4:15309997-15310016 | None:intergenic | 30.0% |
CTCTTTATTCCAATCAACAA+CGG | - | chr5_4:15310117-15310136 | Msa0839900:intron | 30.0% | |
TGTAGAAAACAAATGACAGA+AGG | + | chr5_4:15310186-15310205 | None:intergenic | 30.0% | |
TTTAAGCAATAACATGTCCT+AGG | + | chr5_4:15310717-15310736 | None:intergenic | 30.0% | |
! | CAATTTGAAATCCGAACATA+TGG | - | chr5_4:15310897-15310916 | Msa0839900:intron | 30.0% |
CCAATTTATTAATGGTCTCA+AGG | + | chr5_4:15310924-15310943 | None:intergenic | 30.0% | |
CCTTGAGACCATTAATAAAT+TGG | - | chr5_4:15310921-15310940 | Msa0839900:intron | 30.0% | |
AGAAATGTTTGAGGAAGATT+GGG | + | chr5_4:15311114-15311133 | None:intergenic | 30.0% | |
AAGAAATGTTTGAGGAAGAT+TGG | + | chr5_4:15311115-15311134 | None:intergenic | 30.0% | |
TTGGTTTCTTCAGTTTAGAA+AGG | + | chr5_4:15311235-15311254 | None:intergenic | 30.0% | |
!! | AAATTGGCTTGATTAACTGT+TGG | + | chr5_4:15311254-15311273 | None:intergenic | 30.0% |
TTGTTATCTCTGTAGGATAT+TGG | - | chr5_4:15311332-15311351 | Msa0839900:intron | 30.0% | |
TATTCTAGACAATATGCTGA+AGG | + | chr5_4:15311402-15311421 | None:intergenic | 30.0% | |
! | TTCAGCATATTGTCTAGAAT+AGG | - | chr5_4:15311401-15311420 | Msa0839900:intron | 30.0% |
!! | TAATATCTCTGAAACTTGGA+TGG | - | chr5_4:15311487-15311506 | Msa0839900:intron | 30.0% |
TGTAGCTATTATCACATCTT+GGG | + | chr5_4:15311618-15311637 | None:intergenic | 30.0% | |
CTAATAACCCAAAAACTATG+AGG | + | chr5_4:15311798-15311817 | None:intergenic | 30.0% | |
GTTCTTTATTGACAATGAAG+AGG | - | chr5_4:15311825-15311844 | Msa0839900:intron | 30.0% | |
CAAGCTTAAGCATATAGCAA+TGG | + | chr5_4:15303211-15303230 | None:intergenic | 35.0% | |
AGTGAAAAGTTCAATGGTGA+TGG | + | chr5_4:15303234-15303253 | None:intergenic | 35.0% | |
CTGCATAACAATGCAATCTA+AGG | - | chr5_4:15303252-15303271 | Msa0839900:three_prime_UTR | 35.0% | |
! | AGGTAAAAGTGCACAACAAA+AGG | + | chr5_4:15303581-15303600 | None:intergenic | 35.0% |
! | CATTTCGCCAAAAAAGCATA+AGG | + | chr5_4:15303909-15303928 | None:intergenic | 35.0% |
! | GGACGTAGATACCTTAATTT+TGG | - | chr5_4:15304025-15304044 | Msa0839900:CDS | 35.0% |
! | GTAGATACCTTAATTTTGGG+TGG | - | chr5_4:15304029-15304048 | Msa0839900:CDS | 35.0% |
! | GTGCCTTTAGTGCATTTTAA+AGG | - | chr5_4:15304069-15304088 | Msa0839900:CDS | 35.0% |
GTTTAGAGAGATAGGAACAA+AGG | - | chr5_4:15304149-15304168 | Msa0839900:CDS | 35.0% | |
TGATCGCTACAAAATTAAGG+GGG | + | chr5_4:15304202-15304221 | None:intergenic | 35.0% | |
ATTAGTACATGAACGTGACT+TGG | - | chr5_4:15304279-15304298 | Msa0839900:CDS | 35.0% | |
ATGTATACTGAGGAAACCAT+GGG | + | chr5_4:15304350-15304369 | None:intergenic | 35.0% | |
AATGTATACTGAGGAAACCA+TGG | + | chr5_4:15304351-15304370 | None:intergenic | 35.0% | |
!! | ATTTTGGACATTGTTGGTGA+AGG | - | chr5_4:15304459-15304478 | Msa0839900:intron | 35.0% |
AAAGTATGGACTTACTCTCT+TGG | + | chr5_4:15304610-15304629 | None:intergenic | 35.0% | |
!! | AATGTTAACTTGTGCTCTTG+TGG | - | chr5_4:15304744-15304763 | Msa0839900:CDS | 35.0% |
TCTTGTGGCATAAGTTAAGA+AGG | - | chr5_4:15304759-15304778 | Msa0839900:CDS | 35.0% | |
AATAACTAGGTCAAACACTG+TGG | - | chr5_4:15305084-15305103 | Msa0839900:intron | 35.0% | |
AGCATCGTATATTCCAATGT+AGG | + | chr5_4:15305308-15305327 | None:intergenic | 35.0% | |
TCCTTACTTTCTCTTCTCTA+TGG | - | chr5_4:15305342-15305361 | Msa0839900:intron | 35.0% | |
ACCATAGAGAAGAGAAAGTA+AGG | + | chr5_4:15305346-15305365 | None:intergenic | 35.0% | |
AACATAGAGAGAAGTAGCTA+TGG | + | chr5_4:15305382-15305401 | None:intergenic | 35.0% | |
TTGAGCAAGTCCTTTATTGT+AGG | - | chr5_4:15305440-15305459 | Msa0839900:intron | 35.0% | |
! | GATAGTGGTCTCAACATAAA+AGG | - | chr5_4:15305573-15305592 | Msa0839900:intron | 35.0% |
!! | GGAATGGATAATTGAGTTGA+AGG | - | chr5_4:15305719-15305738 | Msa0839900:intron | 35.0% |
!! | GGATAATTGAGTTGAAGGAT+TGG | - | chr5_4:15305724-15305743 | Msa0839900:intron | 35.0% |
! | ATCTTAAGGAGTCCTTTTTG+TGG | + | chr5_4:15305826-15305845 | None:intergenic | 35.0% |
GGCAAACAATTCTCATCTTA+AGG | + | chr5_4:15305840-15305859 | None:intergenic | 35.0% | |
AGATGAGAATTGTTTGCCAA+TGG | - | chr5_4:15305842-15305861 | Msa0839900:CDS | 35.0% | |
! | TCATTTGCAATCAACCGTTT+TGG | - | chr5_4:15305909-15305928 | Msa0839900:CDS | 35.0% |
TGACATTTATGGCGAATAGA+TGG | + | chr5_4:15306124-15306143 | None:intergenic | 35.0% | |
TTCAAATCACAATCTGAAGG+TGG | - | chr5_4:15306326-15306345 | Msa0839900:intron | 35.0% | |
ACATTAACAAGACGTGTTTG+TGG | - | chr5_4:15306353-15306372 | Msa0839900:intron | 35.0% | |
AAGTAAAACGGGTAGTAGTT+AGG | + | chr5_4:15306403-15306422 | None:intergenic | 35.0% | |
!! | TTTAGTTTGTGGCTTCATTG+TGG | - | chr5_4:15306457-15306476 | Msa0839900:intron | 35.0% |
!!! | CGATTTGGGTTTTAAAACAC+CGG | + | chr5_4:15306488-15306507 | None:intergenic | 35.0% |
!!! | CGGTGTTTTAAAACCCAAAT+CGG | - | chr5_4:15306486-15306505 | Msa0839900:intron | 35.0% |
!! | ATCAGATCAATCACCGATTT+GGG | + | chr5_4:15306502-15306521 | None:intergenic | 35.0% |
!! | TAGTTGGATTGGTGAATCAT+TGG | - | chr5_4:15306538-15306557 | Msa0839900:intron | 35.0% |
CTCATATCTAACAAGGACAT+GGG | + | chr5_4:15306636-15306655 | None:intergenic | 35.0% | |
AAAGAACAAAAGAGCCAAGA+AGG | + | chr5_4:15306903-15306922 | None:intergenic | 35.0% | |
GTTCTATCTTATCATAGCCT+CGG | - | chr5_4:15307001-15307020 | Msa0839900:intron | 35.0% | |
! | CTTTACCTGCTGTTATGTTT+TGG | + | chr5_4:15307246-15307265 | None:intergenic | 35.0% |
AAGTCACGTGCAAGTATTAT+TGG | + | chr5_4:15307999-15308018 | None:intergenic | 35.0% | |
ATTATGGGTCATGCTAACTA+AGG | - | chr5_4:15308032-15308051 | Msa0839900:intron | 35.0% | |
TTATGGGTCATGCTAACTAA+GGG | - | chr5_4:15308033-15308052 | Msa0839900:intron | 35.0% | |
! | ATGCTAACTTGTACCTTTAG+AGG | + | chr5_4:15308108-15308127 | None:intergenic | 35.0% |
GAGATATGCTTGACATTGTT+TGG | - | chr5_4:15308408-15308427 | Msa0839900:intron | 35.0% | |
GCTATTGGCAAATACTCAAA+TGG | + | chr5_4:15308518-15308537 | None:intergenic | 35.0% | |
TAGCATATGACTAAACAGCA+TGG | + | chr5_4:15308656-15308675 | None:intergenic | 35.0% | |
GTTGGACAAATAACATATGC+AGG | + | chr5_4:15308693-15308712 | None:intergenic | 35.0% | |
!!! | TTGTTTTGGTATTGACAGCA+AGG | - | chr5_4:15308734-15308753 | Msa0839900:intron | 35.0% |
! | CATTTAAGCATATCCCCTTT+TGG | - | chr5_4:15308847-15308866 | Msa0839900:intron | 35.0% |
ATGAAAAGGGAAGATGAACA+AGG | - | chr5_4:15309087-15309106 | Msa0839900:intron | 35.0% | |
ATGAACAAGGACTTGAAGAA+TGG | - | chr5_4:15309100-15309119 | Msa0839900:intron | 35.0% | |
TGAACAAGGACTTGAAGAAT+GGG | - | chr5_4:15309101-15309120 | Msa0839900:intron | 35.0% | |
GAATGTTGGATTGCATAAGA+AGG | + | chr5_4:15309168-15309187 | None:intergenic | 35.0% | |
TGGCTTCAATATCTGAATGT+TGG | + | chr5_4:15309182-15309201 | None:intergenic | 35.0% | |
! | TTACTTGGTGAAGATGTTAC+TGG | - | chr5_4:15309225-15309244 | Msa0839900:intron | 35.0% |
!! | CAACGACTAAGTTGATAAGA+AGG | + | chr5_4:15309315-15309334 | None:intergenic | 35.0% |
GAACAGAGAATGAAGTTGAA+CGG | - | chr5_4:15309601-15309620 | Msa0839900:intron | 35.0% | |
GCAATATTCAACATCGAACT+TGG | + | chr5_4:15309681-15309700 | None:intergenic | 35.0% | |
! | TCATACGCAGTTACTGTTTT+TGG | - | chr5_4:15309781-15309800 | Msa0839900:intron | 35.0% |
!!! | TTACTGTTTTTGGTGAGCTA+TGG | - | chr5_4:15309791-15309810 | Msa0839900:intron | 35.0% |
! | TTTTGGTGAGCTATGGAAAT+TGG | - | chr5_4:15309798-15309817 | Msa0839900:intron | 35.0% |
CTCTTTCTTTCTTCAGATAG+AGG | + | chr5_4:15309826-15309845 | None:intergenic | 35.0% | |
CTGAAGAAAGAAAGAGCAAA+TGG | - | chr5_4:15309830-15309849 | Msa0839900:intron | 35.0% | |
! | AGCTCAACCATATAGTTTGT+AGG | + | chr5_4:15309883-15309902 | None:intergenic | 35.0% |
TACCTCAAAGATTCTACCAT+TGG | + | chr5_4:15309929-15309948 | None:intergenic | 35.0% | |
GCTAAGTGCAACATCTTATT+TGG | - | chr5_4:15310251-15310270 | Msa0839900:intron | 35.0% | |
! | CAATGGTGAAAACAGAGTTT+TGG | - | chr5_4:15310302-15310321 | Msa0839900:intron | 35.0% |
!! | GTGAAAACAGAGTTTTGGTA+TGG | - | chr5_4:15310307-15310326 | Msa0839900:intron | 35.0% |
! | GTATCAGAAAGACCAGTTTT+TGG | + | chr5_4:15310412-15310431 | None:intergenic | 35.0% |
TTTCTGATACCGAAAGAAAG+AGG | - | chr5_4:15310422-15310441 | Msa0839900:intron | 35.0% | |
ATGAACCAACCTCTTTCTTT+CGG | + | chr5_4:15310434-15310453 | None:intergenic | 35.0% | |
TATTAGAGATGCACTTGCAA+AGG | - | chr5_4:15310537-15310556 | Msa0839900:CDS | 35.0% | |
AGAACTATGGAACAAGTTAC+TGG | - | chr5_4:15310970-15310989 | Msa0839900:intron | 35.0% | |
! | AACTTCATGGTCTTTTGTGA+AGG | - | chr5_4:15311008-15311027 | Msa0839900:intron | 35.0% |
! | ACTTCATGGTCTTTTGTGAA+GGG | - | chr5_4:15311009-15311028 | Msa0839900:intron | 35.0% |
GTTTATCAGCTTCTGACATA+GGG | + | chr5_4:15311035-15311054 | None:intergenic | 35.0% | |
AGTTTATCAGCTTCTGACAT+AGG | + | chr5_4:15311036-15311055 | None:intergenic | 35.0% | |
GATGCTGCTAAAGTTCAATA+TGG | - | chr5_4:15311135-15311154 | Msa0839900:intron | 35.0% | |
TGCTAAAGTTCAATATGGCA+AGG | - | chr5_4:15311140-15311159 | Msa0839900:intron | 35.0% | |
!! | AAGCCAATTTGTTGTACATG+TGG | - | chr5_4:15311264-15311283 | Msa0839900:intron | 35.0% |
AATCACATTACCACTGAACT+AGG | + | chr5_4:15311303-15311322 | None:intergenic | 35.0% | |
! | AGTTCAGTGGTAATGTGATT+TGG | - | chr5_4:15311303-15311322 | Msa0839900:intron | 35.0% |
GTGTATGTTGTTATCTCTGT+AGG | - | chr5_4:15311325-15311344 | Msa0839900:intron | 35.0% | |
CAAAAGATGAACAAAGCAGA+TGG | - | chr5_4:15311539-15311558 | Msa0839900:intron | 35.0% | |
GTGTAGCTATTATCACATCT+TGG | + | chr5_4:15311619-15311638 | None:intergenic | 35.0% | |
! | TTTGCCTCCTCATAGTTTTT+GGG | - | chr5_4:15311788-15311807 | Msa0839900:intron | 35.0% |
ATAACCCAAAAACTATGAGG+AGG | + | chr5_4:15311795-15311814 | None:intergenic | 35.0% | |
!! | GTTCTGGTTTCAGACTCTTT+CGG | - | chr5_4:15303522-15303541 | Msa0839900:CDS | 40.0% |
!! | CTTAATTTTGGGTGGCACTT+GGG | - | chr5_4:15304037-15304056 | Msa0839900:CDS | 40.0% |
!! | AAAATTAAGGGGGAGCACTT+CGG | + | chr5_4:15304192-15304211 | None:intergenic | 40.0% |
AACACAATACTGTGACGTTG+TGG | - | chr5_4:15304324-15304343 | Msa0839900:intron | 40.0% | |
!! | TTCCTTAACTTGTGCCCTAA+GGG | - | chr5_4:15304883-15304902 | Msa0839900:intron | 40.0% |
!! | CATGTTAACTTGTGCCCTTA+GGG | + | chr5_4:15304900-15304919 | None:intergenic | 40.0% |
!! | TCATGTTAACTTGTGCCCTT+AGG | + | chr5_4:15304901-15304920 | None:intergenic | 40.0% |
CTATTTATGACTCGTGAGGT+AGG | + | chr5_4:15305490-15305509 | None:intergenic | 40.0% | |
CTACCTCACGAGTCATAAAT+AGG | - | chr5_4:15305488-15305507 | Msa0839900:intron | 40.0% | |
ATGCCTATTTATGACTCGTG+AGG | + | chr5_4:15305494-15305513 | None:intergenic | 40.0% | |
GAATGTCAAGTTCATGTGCT+TGG | + | chr5_4:15305547-15305566 | None:intergenic | 40.0% | |
AGGATTGGATCTTGATGAGT+AGG | - | chr5_4:15305739-15305758 | Msa0839900:intron | 40.0% | |
GGATTGGATCTTGATGAGTA+GGG | - | chr5_4:15305740-15305759 | Msa0839900:intron | 40.0% | |
AACCACTAGCTACAATCCAT+TGG | + | chr5_4:15305861-15305880 | None:intergenic | 40.0% | |
ATGTGTAGCCCTAAAGACAA+AGG | - | chr5_4:15306184-15306203 | Msa0839900:CDS | 40.0% | |
TGTGTAGCCCTAAAGACAAA+GGG | - | chr5_4:15306185-15306204 | Msa0839900:CDS | 40.0% | |
GATTCCACCCTTTGTCTTTA+GGG | + | chr5_4:15306195-15306214 | None:intergenic | 40.0% | |
ACATGATAGAACGGAGCTAA+CGG | + | chr5_4:15306230-15306249 | None:intergenic | 40.0% | |
TGTTAGATGTGATATGGGTG+TGG | - | chr5_4:15306247-15306266 | Msa0839900:intron | 40.0% | |
!! | AAGTAGGAGGTTGATGTGTA+AGG | - | chr5_4:15306291-15306310 | Msa0839900:intron | 40.0% |
TTAACAAGACGTGTTTGTGG+TGG | - | chr5_4:15306356-15306375 | Msa0839900:intron | 40.0% | |
ACCATGGAGTGAAGTAAAAC+GGG | + | chr5_4:15306414-15306433 | None:intergenic | 40.0% | |
GACCATGGAGTGAAGTAAAA+CGG | + | chr5_4:15306415-15306434 | None:intergenic | 40.0% | |
!! | TTTTGTGAGTGCCTTTGAGA+AGG | + | chr5_4:15306437-15306456 | None:intergenic | 40.0% |
! | GATCAGATCAATCACCGATT+TGG | + | chr5_4:15306503-15306522 | None:intergenic | 40.0% |
GATTGATCTGATCAAGACAC+TGG | - | chr5_4:15306510-15306529 | Msa0839900:intron | 40.0% | |
CAAGACACTGGATTACTAGT+TGG | - | chr5_4:15306522-15306541 | Msa0839900:intron | 40.0% | |
CACTGGATTACTAGTTGGAT+TGG | - | chr5_4:15306527-15306546 | Msa0839900:intron | 40.0% | |
GAAACGTAAGATAGTTGACC+TGG | - | chr5_4:15306609-15306628 | Msa0839900:intron | 40.0% | |
GCTCATATCTAACAAGGACA+TGG | + | chr5_4:15306637-15306656 | None:intergenic | 40.0% | |
! | ATTTGGATAGGACCCTTTTG+TGG | - | chr5_4:15306864-15306883 | Msa0839900:intron | 40.0% |
! | TTTGGATAGGACCCTTTTGT+GGG | - | chr5_4:15306865-15306884 | Msa0839900:intron | 40.0% |
!! | GAGACAAAGTTTTGACGACA+CGG | + | chr5_4:15307035-15307054 | None:intergenic | 40.0% |
! | TCCTCAAGCAAAGATGCTTT+TGG | - | chr5_4:15309039-15309058 | Msa0839900:intron | 40.0% |
!! | TCCAAAAGCATCTTTGCTTG+AGG | + | chr5_4:15309043-15309062 | None:intergenic | 40.0% |
AGATGTTACTGGAGGAACTA+AGG | - | chr5_4:15309236-15309255 | Msa0839900:intron | 40.0% | |
GATGTTACTGGAGGAACTAA+GGG | - | chr5_4:15309237-15309256 | Msa0839900:intron | 40.0% | |
AATGCCATCACAAACTTGTC+AGG | - | chr5_4:15309285-15309304 | Msa0839900:intron | 40.0% | |
CATACCTGACAAGTTTGTGA+TGG | + | chr5_4:15309292-15309311 | None:intergenic | 40.0% | |
TTGACTACGAGTGTCTAATG+TGG | - | chr5_4:15309511-15309530 | Msa0839900:intron | 40.0% | |
!! | TTGGCATTGTTTTGCTTAGC+AGG | + | chr5_4:15309910-15309929 | None:intergenic | 40.0% |
GCTAAGCAAAACAATGCCAA+TGG | - | chr5_4:15309910-15309929 | Msa0839900:intron | 40.0% | |
TGCCAATGGTAGAATCTTTG+AGG | - | chr5_4:15309924-15309943 | Msa0839900:intron | 40.0% | |
TAAGCATAGAGTCCAACTTC+TGG | + | chr5_4:15310086-15310105 | None:intergenic | 40.0% | |
! | CGTTTAAGACCGTTGTTGAT+TGG | + | chr5_4:15310129-15310148 | None:intergenic | 40.0% |
ACAGGATGCACTTGATTCAA+TGG | - | chr5_4:15310285-15310304 | Msa0839900:intron | 40.0% | |
!! | AACAGAGTTTTGGTATGGTG+AGG | - | chr5_4:15310312-15310331 | Msa0839900:intron | 40.0% |
!! | ACAGAGTTTTGGTATGGTGA+GGG | - | chr5_4:15310313-15310332 | Msa0839900:intron | 40.0% |
!!! | GTTTTTGGTACTTGAGGTGA+TGG | + | chr5_4:15310397-15310416 | None:intergenic | 40.0% |
TCACCTCAAGTACCAAAAAC+TGG | - | chr5_4:15310397-15310416 | Msa0839900:intron | 40.0% | |
!!! | AGACCAGTTTTTGGTACTTG+AGG | + | chr5_4:15310403-15310422 | None:intergenic | 40.0% |
TGATACCGAAAGAAAGAGGT+TGG | - | chr5_4:15310426-15310445 | Msa0839900:intron | 40.0% | |
! | AAGAAAGAGGTTGGTTCATC+AGG | - | chr5_4:15310435-15310454 | Msa0839900:intron | 40.0% |
! | AGAAAGAGGTTGGTTCATCA+GGG | - | chr5_4:15310436-15310455 | Msa0839900:intron | 40.0% |
ATTTGGCAGCCTTGAATACT+TGG | + | chr5_4:15310474-15310493 | None:intergenic | 40.0% | |
AGTGCATCTCTAATAACCGT+TGG | + | chr5_4:15310532-15310551 | None:intergenic | 40.0% | |
TTGACAGCTGAATCAACTTC+TGG | - | chr5_4:15310853-15310872 | Msa0839900:intron | 40.0% | |
CTCGTTGAAAGAGAGAACTA+TGG | - | chr5_4:15310957-15310976 | Msa0839900:intron | 40.0% | |
ACAAGTTACTGGCAAATCAC+CGG | - | chr5_4:15310981-15311000 | Msa0839900:intron | 40.0% | |
AAAGACCATGAAGTTCGAAC+CGG | + | chr5_4:15311003-15311022 | None:intergenic | 40.0% | |
!! | GCTGTAAAAGTGTTTCAGCA+CGG | + | chr5_4:15311074-15311093 | None:intergenic | 40.0% |
GCAGCATCAAGAAATGTTTG+AGG | + | chr5_4:15311123-15311142 | None:intergenic | 40.0% | |
TAGAAAGGCTCGAATGTAGA+TGG | + | chr5_4:15311220-15311239 | None:intergenic | 40.0% | |
TGGCCACATGTACAACAAAT+TGG | + | chr5_4:15311270-15311289 | None:intergenic | 40.0% | |
TGTACATGTGGCCAAAAAGT+TGG | - | chr5_4:15311276-15311295 | Msa0839900:intron | 40.0% | |
! | CTGAACTAGGACCAACTTTT+TGG | + | chr5_4:15311290-15311309 | None:intergenic | 40.0% |
! | AAAAGTTGGTCCTAGTTCAG+TGG | - | chr5_4:15311290-15311309 | Msa0839900:intron | 40.0% |
GGATATTGGACATTCCATTC+TGG | - | chr5_4:15311346-15311365 | Msa0839900:intron | 40.0% | |
GGCTAAATTTCCAAGAACTC+TGG | + | chr5_4:15311381-15311400 | None:intergenic | 40.0% | |
!! | TATCTCTGAAACTTGGATGG+TGG | - | chr5_4:15311490-15311509 | Msa0839900:intron | 40.0% |
TGATAATAGCTACACCAAGC+AGG | - | chr5_4:15311624-15311643 | Msa0839900:intron | 40.0% | |
! | GTTTGCCTCCTCATAGTTTT+TGG | - | chr5_4:15311787-15311806 | Msa0839900:intron | 40.0% |
ATGAGACTTTGGGCTATCCT+TGG | - | chr5_4:15303988-15304007 | Msa0839900:CDS | 45.0% | |
CCAAGTGCCACCCAAAATTA+AGG | + | chr5_4:15304039-15304058 | None:intergenic | 45.0% | |
!! | CCTTAATTTTGGGTGGCACT+TGG | - | chr5_4:15304036-15304055 | Msa0839900:CDS | 45.0% |
!! | AATGCACTAAAGGCACCGAA+AGG | + | chr5_4:15304065-15304084 | None:intergenic | 45.0% |
!! | GTTCCTTAACTTGTGCCCTA+AGG | - | chr5_4:15304882-15304901 | Msa0839900:intron | 45.0% |
GAGATTTGGCATGCCTACAT+TGG | - | chr5_4:15305292-15305311 | Msa0839900:CDS | 45.0% | |
!! | TGCCAATGGATTGTAGCTAG+TGG | - | chr5_4:15305856-15305875 | Msa0839900:CDS | 45.0% |
GGATTCCACCCTTTGTCTTT+AGG | + | chr5_4:15306196-15306215 | None:intergenic | 45.0% | |
!! | GAGCTAACGGTTCAAGTTGT+GGG | + | chr5_4:15306217-15306236 | None:intergenic | 45.0% |
! | ACCCGTTTTACTTCACTCCA+TGG | - | chr5_4:15306410-15306429 | Msa0839900:intron | 45.0% |
! | TTGGATAGGACCCTTTTGTG+GGG | - | chr5_4:15306866-15306885 | Msa0839900:intron | 45.0% |
TACTTGCACGTGACTTTACG+TGG | - | chr5_4:15308003-15308022 | Msa0839900:intron | 45.0% | |
GAGGAAAGCAGAACAAGTAG+AGG | - | chr5_4:15308970-15308989 | Msa0839900:intron | 45.0% | |
AGCAGAACAAGTAGAGGAGA+TGG | - | chr5_4:15308976-15308995 | Msa0839900:intron | 45.0% | |
AGAACAAGTAGAGGAGATGG+AGG | - | chr5_4:15308979-15308998 | Msa0839900:intron | 45.0% | |
CTTGGTGAAGATGTTACTGG+AGG | - | chr5_4:15309228-15309247 | Msa0839900:intron | 45.0% | |
!! | TAAGGGCATCACTACAGCTT+TGG | - | chr5_4:15309254-15309273 | Msa0839900:intron | 45.0% |
GAGCAAATGGCGAAGAGAAA+TGG | - | chr5_4:15309843-15309862 | Msa0839900:intron | 45.0% | |
AATGGCGAAGAGAAATGGAC+TGG | - | chr5_4:15309848-15309867 | Msa0839900:intron | 45.0% | |
TGAATGTCTGCACGAGCTTT+AGG | + | chr5_4:15310045-15310064 | None:intergenic | 45.0% | |
CACACTCATGTCTTTCCCTT+CGG | + | chr5_4:15310350-15310369 | None:intergenic | 45.0% | |
AAGGGAAAGACATGAGTGTG+CGG | - | chr5_4:15310350-15310369 | Msa0839900:intron | 45.0% | |
GTGTGCGGCATAGTAAAAGA+TGG | - | chr5_4:15310365-15310384 | Msa0839900:intron | 45.0% | |
TGCGGCATAGTAAAAGATGG+TGG | - | chr5_4:15310368-15310387 | Msa0839900:intron | 45.0% | |
TCTCTAATAACCGTTGGCAC+AGG | + | chr5_4:15310526-15310545 | None:intergenic | 45.0% | |
GAATGCTCTATGTTGCAGTC+TGG | - | chr5_4:15310796-15310815 | Msa0839900:intron | 45.0% | |
CTCTATGTTGCAGTCTGGAA+AGG | - | chr5_4:15310801-15310820 | Msa0839900:intron | 45.0% | |
!! | AATCACCGGTTCGAACTTCA+TGG | - | chr5_4:15310995-15311014 | Msa0839900:intron | 45.0% |
! | TCTGGAATACGCTTCCAGAA+TGG | + | chr5_4:15311363-15311382 | None:intergenic | 45.0% |
GAAGCGTATTCCAGAGTTCT+TGG | - | chr5_4:15311368-15311387 | Msa0839900:intron | 45.0% | |
TGTCTGGTGCATTAGTAGAG+AGG | - | chr5_4:15311652-15311671 | Msa0839900:intron | 45.0% | |
!!! | ATTTTTTCTTTTAAATTTTT+TGG | - | chr5_4:15304237-15304256 | Msa0839900:CDS | 5.0% |
!! | TTTAAATAATATCAATTAAT+TGG | - | chr5_4:15308565-15308584 | Msa0839900:intron | 5.0% |
!! | TTAAATAATATCAATTAATT+GGG | - | chr5_4:15308566-15308585 | Msa0839900:intron | 5.0% |
!! | AACAAAGGCACCGAAGCCAA+AGG | - | chr5_4:15304164-15304183 | Msa0839900:CDS | 50.0% |
TGCCCTTAGGGCACAAGTTA+AGG | + | chr5_4:15304888-15304907 | None:intergenic | 50.0% | |
TAGGTCAAACACTGTGGTCG+TGG | - | chr5_4:15305090-15305109 | Msa0839900:intron | 50.0% | |
GTAGCCCTAAAGACAAAGGG+TGG | - | chr5_4:15306188-15306207 | Msa0839900:intron | 50.0% | |
!! | GGAGCTAACGGTTCAAGTTG+TGG | + | chr5_4:15306218-15306237 | None:intergenic | 50.0% |
CACTCCATGGTCCTTCTCAA+AGG | - | chr5_4:15306423-15306442 | Msa0839900:intron | 50.0% | |
! | AGTGCCTTTGAGAAGGACCA+TGG | + | chr5_4:15306430-15306449 | None:intergenic | 50.0% |
TGGCTTCATTGTGGTGTAGC+CGG | - | chr5_4:15306466-15306485 | Msa0839900:intron | 50.0% | |
TCTAACAAGGACATGGGACC+AGG | + | chr5_4:15306630-15306649 | None:intergenic | 50.0% | |
GAGAAGAGAGCCCCACAAAA+GGG | + | chr5_4:15306879-15306898 | None:intergenic | 50.0% | |
AGAGAAGAGAGCCCCACAAA+AGG | + | chr5_4:15306880-15306899 | None:intergenic | 50.0% | |
TCTTCCAGCACTCCAGAAGT+TGG | - | chr5_4:15310071-15310090 | Msa0839900:intron | 50.0% | |
!! | GAGTTTTGGTATGGTGAGGG+AGG | - | chr5_4:15310316-15310335 | Msa0839900:intron | 50.0% |
! | GAGGTTGGTTCATCAGGGAA+AGG | - | chr5_4:15310441-15310460 | Msa0839900:intron | 50.0% |
! | GTTGGTTCATCAGGGAAAGG+TGG | - | chr5_4:15310444-15310463 | Msa0839900:intron | 50.0% |
GGTGGTACGCCAAGTATTCA+AGG | - | chr5_4:15310462-15310481 | Msa0839900:intron | 50.0% | |
GCTTGAAATGCCTGTGCCAA+CGG | - | chr5_4:15310513-15310532 | Msa0839900:CDS | 50.0% | |
CAGTCTGGAAAGGCAAACCT+TGG | - | chr5_4:15310811-15310830 | Msa0839900:intron | 50.0% | |
CCTTGTGCAGTTCTTGTCCA+AGG | + | chr5_4:15310831-15310850 | None:intergenic | 50.0% | |
CCTTGGACAAGAACTGCACA+AGG | - | chr5_4:15310828-15310847 | Msa0839900:intron | 50.0% | |
GGTCTCAAGGGCCATATGTT+CGG | + | chr5_4:15310911-15310930 | None:intergenic | 50.0% | |
AACTCACTAAGTTGCTCCCC+TGG | - | chr5_4:15311458-15311477 | Msa0839900:intron | 50.0% | |
!! | CACTTCGGTGCCTTTGGCTT+CGG | + | chr5_4:15304177-15304196 | None:intergenic | 55.0% |
TACTGTGACGTTGTGGCCCA+TGG | - | chr5_4:15304331-15304350 | Msa0839900:intron | 55.0% | |
!! | GACTAGCTTGCTGCAGCAGA+GGG | - | chr5_4:15304558-15304577 | Msa0839900:intron | 55.0% |
GTGAGGTAGGACTGTAGGAC+AGG | + | chr5_4:15305477-15305496 | None:intergenic | 55.0% | |
GACTCGTGAGGTAGGACTGT+AGG | + | chr5_4:15305482-15305501 | None:intergenic | 55.0% | |
GGGCTCTCTTCTCTCCTTCT+TGG | - | chr5_4:15306886-15306905 | Msa0839900:intron | 55.0% | |
ACGACACGGAGAAACTTCCG+AGG | + | chr5_4:15307021-15307040 | None:intergenic | 55.0% | |
!! | GAGTCCAACTTCTGGAGTGC+TGG | + | chr5_4:15310078-15310097 | None:intergenic | 55.0% |
CACCAAGCAGGAGTAGTGTC+TGG | - | chr5_4:15311636-15311655 | Msa0839900:intron | 55.0% | |
CACCAGACACTACTCCTGCT+TGG | + | chr5_4:15311641-15311660 | None:intergenic | 55.0% | |
GGTGGCACTTGGGTGCCTTT+CGG | - | chr5_4:15304047-15304066 | Msa0839900:CDS | 60.0% | |
!! | GGACTAGCTTGCTGCAGCAG+AGG | - | chr5_4:15304557-15304576 | Msa0839900:intron | 60.0% |
GGTATGGTGAGGGAGGAAGC+AGG | - | chr5_4:15310323-15310342 | Msa0839900:intron | 60.0% | |
AGGGAGGAAGCAGGACCGAA+GGG | - | chr5_4:15310332-15310351 | Msa0839900:intron | 60.0% | |
!! | GGGGAGCACTTCGGTGCCTT+TGG | + | chr5_4:15304183-15304202 | None:intergenic | 65.0% |
GAGGGAGGAAGCAGGACCGA+AGG | - | chr5_4:15310331-15310350 | Msa0839900:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_4 | gene | 15303128 | 15311991 | 15303128 | ID=Msa0839900;Name=Msa0839900 |
chr5_4 | mRNA | 15303128 | 15311991 | 15303128 | ID=Msa0839900-mRNA-1;Parent=Msa0839900;Name=Msa0839900-mRNA-1;_AED=0.07;_eAED=0.07;_QI=204|1|1|1|0.71|0.75|8|282|559 |
chr5_4 | exon | 15303128 | 15303772 | 15303128 | ID=Msa0839900-mRNA-1:exon:6588;Parent=Msa0839900-mRNA-1 |
chr5_4 | exon | 15303958 | 15304305 | 15303958 | ID=Msa0839900-mRNA-1:exon:6587;Parent=Msa0839900-mRNA-1 |
chr5_4 | exon | 15304561 | 15304830 | 15304561 | ID=Msa0839900-mRNA-1:exon:6586;Parent=Msa0839900-mRNA-1 |
chr5_4 | exon | 15305012 | 15305086 | 15305012 | ID=Msa0839900-mRNA-1:exon:6585;Parent=Msa0839900-mRNA-1 |
chr5_4 | exon | 15305174 | 15305328 | 15305174 | ID=Msa0839900-mRNA-1:exon:6584;Parent=Msa0839900-mRNA-1 |
chr5_4 | exon | 15305813 | 15306205 | 15305813 | ID=Msa0839900-mRNA-1:exon:6583;Parent=Msa0839900-mRNA-1 |
chr5_4 | exon | 15310505 | 15310638 | 15310505 | ID=Msa0839900-mRNA-1:exon:6582;Parent=Msa0839900-mRNA-1 |
chr5_4 | exon | 15311846 | 15311991 | 15311846 | ID=Msa0839900-mRNA-1:exon:6581;Parent=Msa0839900-mRNA-1 |
chr5_4 | five_prime_UTR | 15311846 | 15311991 | 15311846 | ID=Msa0839900-mRNA-1:five_prime_utr;Parent=Msa0839900-mRNA-1 |
chr5_4 | five_prime_UTR | 15310581 | 15310638 | 15310581 | ID=Msa0839900-mRNA-1:five_prime_utr;Parent=Msa0839900-mRNA-1 |
chr5_4 | CDS | 15310505 | 15310580 | 15310505 | ID=Msa0839900-mRNA-1:cds;Parent=Msa0839900-mRNA-1 |
chr5_4 | CDS | 15305813 | 15306205 | 15305813 | ID=Msa0839900-mRNA-1:cds;Parent=Msa0839900-mRNA-1 |
chr5_4 | CDS | 15305174 | 15305328 | 15305174 | ID=Msa0839900-mRNA-1:cds;Parent=Msa0839900-mRNA-1 |
chr5_4 | CDS | 15305012 | 15305086 | 15305012 | ID=Msa0839900-mRNA-1:cds;Parent=Msa0839900-mRNA-1 |
chr5_4 | CDS | 15304561 | 15304830 | 15304561 | ID=Msa0839900-mRNA-1:cds;Parent=Msa0839900-mRNA-1 |
chr5_4 | CDS | 15303958 | 15304305 | 15303958 | ID=Msa0839900-mRNA-1:cds;Parent=Msa0839900-mRNA-1 |
chr5_4 | CDS | 15303410 | 15303772 | 15303410 | ID=Msa0839900-mRNA-1:cds;Parent=Msa0839900-mRNA-1 |
chr5_4 | three_prime_UTR | 15303128 | 15303409 | 15303128 | ID=Msa0839900-mRNA-1:three_prime_utr;Parent=Msa0839900-mRNA-1 |
Gene Sequence |
Protein sequence |