Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0071020 | XP_013467777.1 | 97.375 | 419 | 10 | 1 | 1 | 418 | 1 | 419 | 0.0 | 837 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0071020 | sp|Q5IH14|SPP1_TOBAC | 69.807 | 414 | 120 | 2 | 1 | 410 | 1 | 413 | 0.0 | 607 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0071020 | Q9FQ10 | 97.375 | 419 | 10 | 1 | 1 | 418 | 1 | 419 | 0.0 | 837 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0009210 | Msa0071020 | 0.846800 | 1.729241e-59 | -8.615850e-47 |
| Msa0011910 | Msa0071020 | 0.820037 | 8.473146e-53 | -8.615850e-47 |
| Msa0018010 | Msa0071020 | 0.806292 | 8.829098e-50 | -8.615850e-47 |
| Msa0024070 | Msa0071020 | 0.811885 | 5.596851e-51 | -8.615850e-47 |
| Msa0028410 | Msa0071020 | 0.837427 | 5.232375e-57 | -8.615850e-47 |
| Msa0028450 | Msa0071020 | 0.835263 | 1.857772e-56 | -8.615850e-47 |
| Msa0030710 | Msa0071020 | 0.823999 | 1.023321e-53 | -8.615850e-47 |
| Msa0030740 | Msa0071020 | 0.812755 | 3.614086e-51 | -8.615850e-47 |
| Msa0035090 | Msa0071020 | 0.845020 | 5.268356e-59 | -8.615850e-47 |
| Msa0044380 | Msa0071020 | 0.831715 | 1.426407e-55 | -8.615850e-47 |
| Msa0045530 | Msa0071020 | 0.829245 | 5.733621e-55 | -8.615850e-47 |
| Msa0046090 | Msa0071020 | 0.827887 | 1.220416e-54 | -8.615850e-47 |
| Msa0056130 | Msa0071020 | 0.800180 | 1.626773e-48 | -8.615850e-47 |
| Msa0058140 | Msa0071020 | 0.809648 | 1.705823e-50 | -8.615850e-47 |
| Msa0058970 | Msa0071020 | 0.833062 | 6.617851e-56 | -8.615850e-47 |
| Msa0060720 | Msa0071020 | 0.816016 | 6.871663e-52 | -8.615850e-47 |
| Msa0067820 | Msa0071020 | 0.832025 | 1.196331e-55 | -8.615850e-47 |
| Msa0071020 | Msa0078080 | 0.800678 | 1.287383e-48 | -8.615850e-47 |
| Msa0071020 | Msa0079530 | 0.801248 | 9.849555e-49 | -8.615850e-47 |
| Msa0071020 | Msa0083570 | 0.807083 | 6.011403e-50 | -8.615850e-47 |
| Msa0071020 | Msa0092750 | 0.855525 | 5.950199e-62 | -8.615850e-47 |
| Msa0071020 | Msa0093830 | 0.849816 | 2.535422e-60 | -8.615850e-47 |
| Msa0071020 | Msa0097490 | 0.816244 | 6.112554e-52 | -8.615850e-47 |
| Msa0071020 | Msa0102290 | 0.827552 | 1.468833e-54 | -8.615850e-47 |
| Msa0071020 | Msa0105500 | 0.802432 | 5.627398e-49 | -8.615850e-47 |
| Msa0071020 | Msa0118250 | 0.813351 | 2.675084e-51 | -8.615850e-47 |
| Msa0071020 | Msa0118960 | 0.820878 | 5.436098e-53 | -8.615850e-47 |
| Msa0071020 | Msa0124070 | 0.848705 | 5.168746e-60 | -8.615850e-47 |
| Msa0071020 | Msa0127110 | 0.812245 | 4.671638e-51 | -8.615850e-47 |
| Msa0071020 | Msa0128840 | 0.815546 | 8.745765e-52 | -8.615850e-47 |
| Msa0071020 | Msa0130120 | 0.832263 | 1.044477e-55 | -8.615850e-47 |
| Msa0071020 | Msa0131230 | 0.838714 | 2.440588e-57 | -8.615850e-47 |
| Msa0071020 | Msa0141770 | 0.800066 | 1.715445e-48 | -8.615850e-47 |
| Msa0071020 | Msa0143360 | 0.801881 | 7.303521e-49 | -8.615850e-47 |
| Msa0071020 | Msa0143490 | 0.816451 | 5.494386e-52 | -8.615850e-47 |
| Msa0071020 | Msa0147070 | 0.827741 | 1.323476e-54 | -8.615850e-47 |
| Msa0071020 | Msa0149070 | 0.834915 | 2.273606e-56 | -8.615850e-47 |
| Msa0071020 | Msa0151780 | 0.818177 | 2.245583e-52 | -8.615850e-47 |
| Msa0071020 | Msa0151790 | 0.805673 | 1.191426e-49 | -8.615850e-47 |
| Msa0071020 | Msa0170550 | 0.817074 | 3.981820e-52 | -8.615850e-47 |
| Msa0071020 | Msa0175900 | 0.828191 | 1.031077e-54 | -8.615850e-47 |
| Msa0071020 | Msa0181380 | 0.817531 | 3.142057e-52 | -8.615850e-47 |
| Msa0071020 | Msa0183490 | 0.831378 | 1.727369e-55 | -8.615850e-47 |
| Msa0071020 | Msa0185550 | 0.814536 | 1.465495e-51 | -8.615850e-47 |
| Msa0071020 | Msa0185770 | 0.806123 | 9.581769e-50 | -8.615850e-47 |
| Msa0071020 | Msa0186750 | 0.835648 | 1.484891e-56 | -8.615850e-47 |
| Msa0071020 | Msa0195850 | 0.808497 | 3.008496e-50 | -8.615850e-47 |
| Msa0071020 | Msa0196620 | 0.834646 | 2.657557e-56 | -8.615850e-47 |
| Msa0071020 | Msa0202630 | 0.810927 | 9.034851e-51 | -8.615850e-47 |
| Msa0071020 | Msa0206970 | 0.808617 | 2.836621e-50 | -8.615850e-47 |
| Msa0071020 | Msa0213020 | 0.823265 | 1.519844e-53 | -8.615850e-47 |
| Msa0071020 | Msa0216900 | 0.815238 | 1.024255e-51 | -8.615850e-47 |
| Msa0071020 | Msa0226800 | 0.807387 | 5.180877e-50 | -8.615850e-47 |
| Msa0071020 | Msa0231180 | 0.820037 | 8.473146e-53 | -8.615850e-47 |
| Msa0071020 | Msa0234930 | 0.813633 | 2.318749e-51 | -8.615850e-47 |
| Msa0071020 | Msa0236350 | 0.844969 | 5.437047e-59 | -8.615850e-47 |
| Msa0071020 | Msa0266100 | 0.852029 | 6.033861e-61 | -8.615850e-47 |
| Msa0071020 | Msa0269790 | 0.804505 | 2.091572e-49 | -8.615850e-47 |
| Msa0071020 | Msa0273270 | 0.812192 | 4.796892e-51 | -8.615850e-47 |
| Msa0071020 | Msa0274870 | 0.837668 | 4.537636e-57 | -8.615850e-47 |
| Msa0071020 | Msa0275260 | 0.819535 | 1.103754e-52 | -8.615850e-47 |
| Msa0071020 | Msa0280120 | 0.811282 | 7.569780e-51 | -8.615850e-47 |
| Msa0071020 | Msa0284260 | 0.805297 | 1.428759e-49 | -8.615850e-47 |
| Msa0071020 | Msa0284980 | 0.830117 | 3.517911e-55 | -8.615850e-47 |
| Msa0071020 | Msa0285710 | 0.818191 | 2.229975e-52 | -8.615850e-47 |
| Msa0071020 | Msa0288300 | 0.808519 | 2.975944e-50 | -8.615850e-47 |
| Msa0071020 | Msa0288350 | 0.806151 | 9.454105e-50 | -8.615850e-47 |
| Msa0071020 | Msa0288360 | 0.826435 | 2.717307e-54 | -8.615850e-47 |
| Msa0071020 | Msa0290040 | 0.832740 | 7.953874e-56 | -8.615850e-47 |
| Msa0071020 | Msa0296100 | 0.836139 | 1.114505e-56 | -8.615850e-47 |
| Msa0071020 | Msa0301800 | 0.806957 | 6.391829e-50 | -8.615850e-47 |
| Msa0071020 | Msa0304020 | 0.807282 | 5.454623e-50 | -8.615850e-47 |
| Msa0071020 | Msa0304070 | 0.816837 | 4.500787e-52 | -8.615850e-47 |
| Msa0071020 | Msa0304870 | 0.816748 | 4.713270e-52 | -8.615850e-47 |
| Msa0071020 | Msa0305810 | 0.839899 | 1.202296e-57 | -8.615850e-47 |
| Msa0071020 | Msa0307490 | 0.811613 | 6.414136e-51 | -8.615850e-47 |
| Msa0071020 | Msa0307750 | 0.867875 | 9.908343e-66 | -8.615850e-47 |
| Msa0071020 | Msa0313550 | 0.808438 | 3.097287e-50 | -8.615850e-47 |
| Msa0071020 | Msa0315760 | 0.806542 | 7.819211e-50 | -8.615850e-47 |
| Msa0071020 | Msa0321100 | 0.800096 | 1.691343e-48 | -8.615850e-47 |
| Msa0071020 | Msa0321230 | 0.806643 | 7.447120e-50 | -8.615850e-47 |
| Msa0071020 | Msa0323790 | 0.803660 | 3.135128e-49 | -8.615850e-47 |
| Msa0071020 | Msa0324060 | 0.805609 | 1.228993e-49 | -8.615850e-47 |
| Msa0071020 | Msa0335740 | 0.800521 | 1.386220e-48 | -8.615850e-47 |
| Msa0071020 | Msa0341260 | 0.818105 | 2.331134e-52 | -8.615850e-47 |
| Msa0071020 | Msa0341710 | 0.843376 | 1.455345e-58 | -8.615850e-47 |
| Msa0071020 | Msa0353890 | 0.815346 | 9.690653e-52 | -8.615850e-47 |
| Msa0071020 | Msa0369770 | 0.829447 | 5.122126e-55 | -8.615850e-47 |
| Msa0071020 | Msa0371050 | 0.847539 | 1.084839e-59 | -8.615850e-47 |
| Msa0071020 | Msa0371640 | 0.806950 | 6.413121e-50 | -8.615850e-47 |
| Msa0071020 | Msa0372550 | 0.804083 | 2.561584e-49 | -8.615850e-47 |
| Msa0071020 | Msa0376760 | 0.837627 | 4.648368e-57 | -8.615850e-47 |
| Msa0071020 | Msa0376900 | 0.821064 | 4.924699e-53 | -8.615850e-47 |
| Msa0071020 | Msa0377460 | 0.801877 | 7.316583e-49 | -8.615850e-47 |
| Msa0071020 | Msa0379090 | 0.824775 | 6.724524e-54 | -8.615850e-47 |
| Msa0071020 | Msa0379900 | 0.803937 | 2.746665e-49 | -8.615850e-47 |
| Msa0071020 | Msa0384570 | 0.809542 | 1.796988e-50 | -8.615850e-47 |
| Msa0071020 | Msa0387120 | 0.829354 | 5.395404e-55 | -8.615850e-47 |
| Msa0071020 | Msa0388000 | 0.801870 | 7.343644e-49 | -8.615850e-47 |
| Msa0071020 | Msa0392480 | 0.801920 | 7.171578e-49 | -8.615850e-47 |
| Msa0071020 | Msa0394330 | 0.826953 | 2.044518e-54 | -8.615850e-47 |
| Msa0071020 | Msa0398990 | 0.818331 | 2.073011e-52 | -8.615850e-47 |
| Msa0071020 | Msa0401370 | 0.806311 | 8.747845e-50 | -8.615850e-47 |
| Msa0071020 | Msa0403670 | 0.803164 | 3.971901e-49 | -8.615850e-47 |
| Msa0071020 | Msa0404840 | 0.829043 | 6.418327e-55 | -8.615850e-47 |
| Msa0071020 | Msa0417140 | 0.811107 | 8.261332e-51 | -8.615850e-47 |
| Msa0071020 | Msa0420100 | 0.812399 | 4.323077e-51 | -8.615850e-47 |
| Msa0071020 | Msa0426890 | 0.805374 | 1.376436e-49 | -8.615850e-47 |
| Msa0071020 | Msa0429560 | 0.808614 | 2.840149e-50 | -8.615850e-47 |
| Msa0071020 | Msa0431310 | 0.814918 | 1.206052e-51 | -8.615850e-47 |
| Msa0071020 | Msa0434630 | 0.827470 | 1.537454e-54 | -8.615850e-47 |
| Msa0071020 | Msa0436310 | 0.831927 | 1.264825e-55 | -8.615850e-47 |
| Msa0071020 | Msa0438990 | 0.809427 | 1.902920e-50 | -8.615850e-47 |
| Msa0071020 | Msa0439130 | 0.802604 | 5.184137e-49 | -8.615850e-47 |
| Msa0071020 | Msa0447820 | 0.813014 | 3.172162e-51 | -8.615850e-47 |
| Msa0071020 | Msa0450860 | 0.836910 | 7.095457e-57 | -8.615850e-47 |
| Msa0071020 | Msa0457750 | 0.811510 | 6.754127e-51 | -8.615850e-47 |
| Msa0071020 | Msa0463980 | 0.833923 | 4.034728e-56 | -8.615850e-47 |
| Msa0071020 | Msa0467890 | 0.818789 | 1.631496e-52 | -8.615850e-47 |
| Msa0071020 | Msa0467970 | 0.815439 | 9.238966e-52 | -8.615850e-47 |
| Msa0071020 | Msa0471700 | 0.838971 | 2.094678e-57 | -8.615850e-47 |
| Msa0071020 | Msa0475080 | 0.826744 | 2.293114e-54 | -8.615850e-47 |
| Msa0071020 | Msa0476150 | 0.819372 | 1.202045e-52 | -8.615850e-47 |
| Msa0071020 | Msa0476490 | 0.801172 | 1.020541e-48 | -8.615850e-47 |
| Msa0071020 | Msa0485350 | 0.821499 | 3.909396e-53 | -8.615850e-47 |
| Msa0071020 | Msa0486200 | 0.812539 | 4.030122e-51 | -8.615850e-47 |
| Msa0071020 | Msa0489620 | 0.823976 | 1.036496e-53 | -8.615850e-47 |
| Msa0071020 | Msa0493430 | 0.806349 | 8.588309e-50 | -8.615850e-47 |
| Msa0071020 | Msa0497060 | 0.806904 | 6.557969e-50 | -8.615850e-47 |
| Msa0071020 | Msa0498090 | 0.804682 | 1.921485e-49 | -8.615850e-47 |
| Msa0071020 | Msa0506740 | 0.817636 | 2.976032e-52 | -8.615850e-47 |
| Msa0071020 | Msa0508620 | 0.809657 | 1.697944e-50 | -8.615850e-47 |
| Msa0071020 | Msa0508660 | 0.810956 | 8.908311e-51 | -8.615850e-47 |
| Msa0071020 | Msa0509530 | 0.828789 | 7.393347e-55 | -8.615850e-47 |
| Msa0071020 | Msa0517400 | 0.804889 | 1.739476e-49 | -8.615850e-47 |
| Msa0071020 | Msa0520450 | 0.816422 | 5.576317e-52 | -8.615850e-47 |
| Msa0071020 | Msa0524020 | 0.804789 | 1.824716e-49 | -8.615850e-47 |
| Msa0071020 | Msa0527420 | 0.805745 | 1.150781e-49 | -8.615850e-47 |
| Msa0071020 | Msa0538100 | 0.837005 | 6.708648e-57 | -8.615850e-47 |
| Msa0071020 | Msa0538140 | 0.813494 | 2.488282e-51 | -8.615850e-47 |
| Msa0071020 | Msa0545350 | 0.817292 | 3.555918e-52 | -8.615850e-47 |
| Msa0071020 | Msa0550280 | 0.802364 | 5.809835e-49 | -8.615850e-47 |
| Msa0071020 | Msa0550720 | 0.804085 | 2.558961e-49 | -8.615850e-47 |
| Msa0071020 | Msa0550820 | 0.817071 | 3.988391e-52 | -8.615850e-47 |
| Msa0071020 | Msa0558220 | 0.800731 | 1.255993e-48 | -8.615850e-47 |
| Msa0071020 | Msa0562040 | 0.813560 | 2.406554e-51 | -8.615850e-47 |
| Msa0071020 | Msa0562740 | 0.834489 | 2.910268e-56 | -8.615850e-47 |
| Msa0071020 | Msa0565930 | 0.827231 | 1.753784e-54 | -8.615850e-47 |
| Msa0071020 | Msa0570310 | 0.802118 | 6.529292e-49 | -8.615850e-47 |
| Msa0071020 | Msa0574450 | 0.837264 | 5.760454e-57 | -8.615850e-47 |
| Msa0071020 | Msa0577140 | 0.812449 | 4.215630e-51 | -8.615850e-47 |
| Msa0071020 | Msa0577910 | 0.834267 | 3.308215e-56 | -8.615850e-47 |
| Msa0071020 | Msa0578400 | 0.809627 | 1.723527e-50 | -8.615850e-47 |
| Msa0071020 | Msa0583810 | 0.840952 | 6.377048e-58 | -8.615850e-47 |
| Msa0071020 | Msa0585770 | 0.836976 | 6.823925e-57 | -8.615850e-47 |
| Msa0071020 | Msa0587060 | 0.833074 | 6.570915e-56 | -8.615850e-47 |
| Msa0071020 | Msa0600940 | 0.801612 | 8.295597e-49 | -8.615850e-47 |
| Msa0071020 | Msa0606180 | 0.818625 | 1.777377e-52 | -8.615850e-47 |
| Msa0071020 | Msa0607070 | 0.814287 | 1.664105e-51 | -8.615850e-47 |
| Msa0071020 | Msa0616570 | 0.813215 | 2.865705e-51 | -8.615850e-47 |
| Msa0071020 | Msa0619170 | 0.819227 | 1.297586e-52 | -8.615850e-47 |
| Msa0071020 | Msa0623350 | 0.813254 | 2.809215e-51 | -8.615850e-47 |
| Msa0071020 | Msa0625820 | 0.808533 | 2.956132e-50 | -8.615850e-47 |
| Msa0071020 | Msa0625850 | 0.801745 | 7.788604e-49 | -8.615850e-47 |
| Msa0071020 | Msa0626890 | 0.821085 | 4.869091e-53 | -8.615850e-47 |
| Msa0071020 | Msa0644610 | 0.805299 | 1.427454e-49 | -8.615850e-47 |
| Msa0071020 | Msa0646710 | 0.808657 | 2.780860e-50 | -8.615850e-47 |
| Msa0071020 | Msa0647110 | 0.811555 | 6.604369e-51 | -8.615850e-47 |
| Msa0071020 | Msa0649140 | 0.829792 | 4.222588e-55 | -8.615850e-47 |
| Msa0071020 | Msa0653690 | 0.843495 | 1.352833e-58 | -8.615850e-47 |
| Msa0071020 | Msa0655980 | 0.818932 | 1.514383e-52 | -8.615850e-47 |
| Msa0071020 | Msa0659130 | 0.803381 | 3.582376e-49 | -8.615850e-47 |
| Msa0071020 | Msa0660160 | 0.806653 | 7.410626e-50 | -8.615850e-47 |
| Msa0071020 | Msa0661490 | 0.818113 | 2.321910e-52 | -8.615850e-47 |
| Msa0071020 | Msa0663630 | 0.808573 | 2.898792e-50 | -8.615850e-47 |
| Msa0071020 | Msa0663650 | 0.847931 | 8.463088e-60 | -8.615850e-47 |
| Msa0071020 | Msa0665010 | 0.823803 | 1.137618e-53 | -8.615850e-47 |
| Msa0071020 | Msa0677160 | 0.807054 | 6.096870e-50 | -8.615850e-47 |
| Msa0071020 | Msa0679880 | 0.818359 | 2.043074e-52 | -8.615850e-47 |
| Msa0071020 | Msa0687540 | 0.801727 | 7.855771e-49 | -8.615850e-47 |
| Msa0071020 | Msa0687650 | 0.812696 | 3.722769e-51 | -8.615850e-47 |
| Msa0071020 | Msa0687740 | 0.817686 | 2.899270e-52 | -8.615850e-47 |
| Msa0071020 | Msa0688350 | 0.819590 | 1.072557e-52 | -8.615850e-47 |
| Msa0071020 | Msa0689980 | 0.824256 | 8.907343e-54 | -8.615850e-47 |
| Msa0071020 | Msa0694910 | 0.800892 | 1.164629e-48 | -8.615850e-47 |
| Msa0071020 | Msa0695930 | 0.829350 | 5.407603e-55 | -8.615850e-47 |
| Msa0071020 | Msa0699900 | 0.810013 | 1.423650e-50 | -8.615850e-47 |
| Msa0071020 | Msa0702070 | 0.801534 | 8.603555e-49 | -8.615850e-47 |
| Msa0071020 | Msa0702120 | 0.821700 | 3.512388e-53 | -8.615850e-47 |
| Msa0071020 | Msa0703620 | 0.810267 | 1.254883e-50 | -8.615850e-47 |
| Msa0071020 | Msa0704570 | 0.833925 | 4.029668e-56 | -8.615850e-47 |
| Msa0071020 | Msa0705610 | 0.812370 | 4.386934e-51 | -8.615850e-47 |
| Msa0071020 | Msa0708120 | 0.835574 | 1.550346e-56 | -8.615850e-47 |
| Msa0071020 | Msa0708450 | 0.824917 | 6.224241e-54 | -8.615850e-47 |
| Msa0071020 | Msa0711510 | 0.825305 | 5.041196e-54 | -8.615850e-47 |
| Msa0071020 | Msa0712070 | 0.853368 | 2.503161e-61 | -8.615850e-47 |
| Msa0071020 | Msa0715180 | 0.816015 | 6.876114e-52 | -8.615850e-47 |
| Msa0071020 | Msa0716670 | 0.809966 | 1.457307e-50 | -8.615850e-47 |
| Msa0071020 | Msa0718900 | 0.805706 | 1.172713e-49 | -8.615850e-47 |
| Msa0071020 | Msa0720380 | 0.828111 | 1.078230e-54 | -8.615850e-47 |
| Msa0071020 | Msa0720850 | 0.835927 | 1.261948e-56 | -8.615850e-47 |
| Msa0071020 | Msa0733110 | 0.810869 | 9.302477e-51 | -8.615850e-47 |
| Msa0071020 | Msa0734430 | 0.834646 | 2.657152e-56 | -8.615850e-47 |
| Msa0071020 | Msa0748470 | 0.814330 | 1.627806e-51 | -8.615850e-47 |
| Msa0071020 | Msa0749940 | 0.811638 | 6.333755e-51 | -8.615850e-47 |
| Msa0071020 | Msa0751640 | 0.840596 | 7.907677e-58 | -8.615850e-47 |
| Msa0071020 | Msa0760950 | 0.815044 | 1.130959e-51 | -8.615850e-47 |
| Msa0071020 | Msa0761930 | 0.831588 | 1.533198e-55 | -8.615850e-47 |
| Msa0071020 | Msa0762480 | 0.805579 | 1.247074e-49 | -8.615850e-47 |
| Msa0071020 | Msa0772530 | 0.825159 | 5.457196e-54 | -8.615850e-47 |
| Msa0071020 | Msa0775970 | 0.814870 | 1.236117e-51 | -8.615850e-47 |
| Msa0071020 | Msa0794300 | 0.816813 | 4.556504e-52 | -8.615850e-47 |
| Msa0071020 | Msa0801490 | 0.805705 | 1.173427e-49 | -8.615850e-47 |
| Msa0071020 | Msa0803930 | 0.810051 | 1.396715e-50 | -8.615850e-47 |
| Msa0071020 | Msa0811710 | 0.827803 | 1.278669e-54 | -8.615850e-47 |
| Msa0071020 | Msa0814760 | 0.814413 | 1.560576e-51 | -8.615850e-47 |
| Msa0071020 | Msa0815340 | 0.800665 | 1.295377e-48 | -8.615850e-47 |
| Msa0071020 | Msa0831710 | 0.819869 | 9.260795e-53 | -8.615850e-47 |
| Msa0071020 | Msa0836200 | 0.800222 | 1.594467e-48 | -8.615850e-47 |
| Msa0071020 | Msa0837040 | 0.807858 | 4.115793e-50 | -8.615850e-47 |
| Msa0071020 | Msa0839900 | 0.811136 | 8.142739e-51 | -8.615850e-47 |
| Msa0071020 | Msa0841570 | 0.818685 | 1.723130e-52 | -8.615850e-47 |
| Msa0071020 | Msa0842370 | 0.805148 | 1.535172e-49 | -8.615850e-47 |
| Msa0071020 | Msa0851870 | 0.823356 | 1.447719e-53 | -8.615850e-47 |
| Msa0071020 | Msa0853920 | 0.807353 | 5.267607e-50 | -8.615850e-47 |
| Msa0071020 | Msa0855490 | 0.812418 | 4.282939e-51 | -8.615850e-47 |
| Msa0071020 | Msa0866650 | 0.837101 | 6.339727e-57 | -8.615850e-47 |
| Msa0071020 | Msa0880200 | 0.817130 | 3.868842e-52 | -8.615850e-47 |
| Msa0071020 | Msa0893390 | 0.821578 | 3.748033e-53 | -8.615850e-47 |
| Msa0071020 | Msa0899140 | 0.816456 | 5.478693e-52 | -8.615850e-47 |
| Msa0071020 | Msa0905200 | 0.808131 | 3.600347e-50 | -8.615850e-47 |
| Msa0071020 | Msa0910650 | 0.846710 | 1.830247e-59 | -8.615850e-47 |
| Msa0071020 | Msa0926090 | 0.801345 | 9.409448e-49 | -8.615850e-47 |
| Msa0071020 | Msa0929440 | 0.816704 | 4.820202e-52 | -8.615850e-47 |
| Msa0071020 | Msa0930160 | 0.810075 | 1.380234e-50 | -8.615850e-47 |
| Msa0071020 | Msa0959710 | 0.802760 | 4.814334e-49 | -8.615850e-47 |
| Msa0071020 | Msa0959970 | 0.862872 | 3.724359e-64 | -8.615850e-47 |
| Msa0071020 | Msa0967940 | 0.836787 | 7.623603e-57 | -8.615850e-47 |
| Msa0071020 | Msa0968010 | 0.814268 | 1.679945e-51 | -8.615850e-47 |
| Msa0071020 | Msa0970120 | 0.810617 | 1.054477e-50 | -8.615850e-47 |
| Msa0071020 | Msa0976950 | 0.808856 | 2.521952e-50 | -8.615850e-47 |
| Msa0071020 | Msa0985570 | 0.850666 | 1.465184e-60 | -8.615850e-47 |
| Msa0071020 | Msa1015020 | 0.806356 | 8.560990e-50 | -8.615850e-47 |
| Msa0071020 | Msa1015220 | 0.800401 | 1.466254e-48 | -8.615850e-47 |
| Msa0071020 | Msa1031650 | 0.813586 | 2.375179e-51 | -8.615850e-47 |
| Msa0071020 | Msa1033460 | 0.814846 | 1.251310e-51 | -8.615850e-47 |
| Msa0071020 | Msa1035090 | 0.827412 | 1.587469e-54 | -8.615850e-47 |
| Msa0071020 | Msa1037570 | 0.817088 | 3.954042e-52 | -8.615850e-47 |
| Msa0071020 | Msa1040030 | 0.811312 | 7.454713e-51 | -8.615850e-47 |
| Msa0071020 | Msa1040770 | 0.812801 | 3.531650e-51 | -8.615850e-47 |
| Msa0071020 | Msa1041620 | 0.803681 | 3.104193e-49 | -8.615850e-47 |
| Msa0071020 | Msa1042380 | 0.804221 | 2.396893e-49 | -8.615850e-47 |
| Msa0071020 | Msa1054620 | 0.809182 | 2.146906e-50 | -8.615850e-47 |
| Msa0071020 | Msa1055490 | 0.802798 | 4.729009e-49 | -8.615850e-47 |
| Msa0071020 | Msa1056520 | 0.849567 | 2.977160e-60 | -8.615850e-47 |
| Msa0071020 | Msa1066930 | 0.805265 | 1.451110e-49 | -8.615850e-47 |
| Msa0071020 | Msa1070710 | 0.811718 | 6.085174e-51 | -8.615850e-47 |
| Msa0071020 | Msa1070930 | 0.801425 | 9.061265e-49 | -8.615850e-47 |
| Msa0071020 | Msa1073140 | 0.819298 | 1.249835e-52 | -8.615850e-47 |
| Msa0071020 | Msa1076070 | 0.800612 | 1.328452e-48 | -8.615850e-47 |
| Msa0071020 | Msa1082760 | 0.827439 | 1.563552e-54 | -8.615850e-47 |
| Msa0071020 | Msa1090230 | 0.854601 | 1.104302e-61 | -8.615850e-47 |
| Msa0071020 | Msa1113780 | 0.809520 | 1.817245e-50 | -8.615850e-47 |
| Msa0071020 | Msa1118870 | 0.806609 | 7.568371e-50 | -8.615850e-47 |
| Msa0071020 | Msa1125150 | 0.804225 | 2.392987e-49 | -8.615850e-47 |
| Msa0071020 | Msa1127530 | 0.815636 | 8.353070e-52 | -8.615850e-47 |
| Msa0071020 | Msa1128350 | 0.821833 | 3.271360e-53 | -8.615850e-47 |
| Msa0071020 | Msa1130700 | 0.820382 | 7.066649e-53 | -8.615850e-47 |
| Msa0071020 | Msa1131010 | 0.814314 | 1.640755e-51 | -8.615850e-47 |
| Msa0071020 | Msa1134840 | 0.800783 | 1.225731e-48 | -8.615850e-47 |
| Msa0071020 | Msa1140940 | 0.810209 | 1.291563e-50 | -8.615850e-47 |
| Msa0071020 | Msa1150170 | 0.801396 | 9.182397e-49 | -8.615850e-47 |
| Msa0071020 | Msa1160470 | 0.819127 | 1.367266e-52 | -8.615850e-47 |
| Msa0071020 | Msa1161550 | 0.803539 | 3.322590e-49 | -8.615850e-47 |
| Msa0071020 | Msa1162470 | 0.804200 | 2.421549e-49 | -8.615850e-47 |
| Msa0071020 | Msa1165330 | 0.805126 | 1.551846e-49 | -8.615850e-47 |
| Msa0071020 | Msa1166020 | 0.802585 | 5.231596e-49 | -8.615850e-47 |
| Msa0071020 | Msa1166520 | 0.800654 | 1.302003e-48 | -8.615850e-47 |
| Msa0071020 | Msa1173410 | 0.801293 | 9.641316e-49 | -8.615850e-47 |
| Msa0071020 | Msa1175740 | 0.807201 | 5.674658e-50 | -8.615850e-47 |
| Msa0071020 | Msa1177300 | 0.835157 | 1.975575e-56 | -8.615850e-47 |
| Msa0071020 | Msa1183850 | 0.800829 | 1.199191e-48 | -8.615850e-47 |
| Msa0071020 | Msa1190670 | 0.805696 | 1.178247e-49 | -8.615850e-47 |
| Msa0071020 | Msa1193680 | 0.810552 | 1.089147e-50 | -8.615850e-47 |
| Msa0071020 | Msa1196910 | 0.801972 | 6.995891e-49 | -8.615850e-47 |
| Msa0071020 | Msa1196990 | 0.802910 | 4.483188e-49 | -8.615850e-47 |
| Msa0071020 | Msa1197210 | 0.803069 | 4.156421e-49 | -8.615850e-47 |
| Msa0071020 | Msa1206440 | 0.840514 | 8.307599e-58 | -8.615850e-47 |
| Msa0071020 | Msa1206500 | 0.800020 | 1.753268e-48 | -8.615850e-47 |
| Msa0071020 | Msa1212070 | 0.813108 | 3.024465e-51 | -8.615850e-47 |
| Msa0071020 | Msa1216820 | 0.802583 | 5.237857e-49 | -8.615850e-47 |
| Msa0071020 | Msa1217020 | 0.811581 | 6.516032e-51 | -8.615850e-47 |
| Msa0071020 | Msa1217170 | 0.822845 | 1.905044e-53 | -8.615850e-47 |
| Msa0071020 | Msa1223050 | 0.809065 | 2.275020e-50 | -8.615850e-47 |
| Msa0071020 | Msa1223520 | 0.836594 | 8.538386e-57 | -8.615850e-47 |
| Msa0071020 | Msa1223600 | 0.800485 | 1.409599e-48 | -8.615850e-47 |
| Msa0071020 | Msa1224140 | 0.800242 | 1.579670e-48 | -8.615850e-47 |
| Msa0071020 | Msa1232010 | 0.806412 | 8.330841e-50 | -8.615850e-47 |
| Msa0071020 | Msa1235880 | 0.821604 | 3.695978e-53 | -8.615850e-47 |
| Msa0071020 | Msa1236090 | 0.837683 | 4.498316e-57 | -8.615850e-47 |
| Msa0071020 | Msa1249740 | 0.817232 | 3.668896e-52 | -8.615850e-47 |
| Msa0071020 | Msa1250490 | 0.841293 | 5.187234e-58 | -8.615850e-47 |
| Msa0071020 | Msa1262630 | 0.854424 | 1.242063e-61 | -8.615850e-47 |
| Msa0071020 | Msa1263460 | 0.831213 | 1.896524e-55 | -8.615850e-47 |
| Msa0071020 | Msa1263600 | 0.842019 | 3.338949e-58 | -8.615850e-47 |
| Msa0071020 | Msa1269550 | 0.813589 | 2.371118e-51 | -8.615850e-47 |
| Msa0071020 | Msa1274740 | 0.806471 | 8.094606e-50 | -8.615850e-47 |
| Msa0071020 | Msa1293530 | 0.805534 | 1.274689e-49 | -8.615850e-47 |
| Msa0071020 | Msa1297550 | 0.803103 | 4.090017e-49 | -8.615850e-47 |
| Msa0071020 | Msa1302750 | 0.835245 | 1.876912e-56 | -8.615850e-47 |
| Msa0071020 | Msa1302920 | 0.806829 | 6.802786e-50 | -8.615850e-47 |
| Msa0071020 | Msa1315990 | 0.818140 | 2.289837e-52 | -8.615850e-47 |
| Msa0071020 | Msa1317090 | 0.832441 | 9.438951e-56 | -8.615850e-47 |
| Msa0071020 | Msa1317340 | 0.815555 | 8.704482e-52 | -8.615850e-47 |
| Msa0071020 | Msa1319520 | 0.808065 | 3.720015e-50 | -8.615850e-47 |
| Msa0071020 | Msa1325260 | 0.802571 | 5.265920e-49 | -8.615850e-47 |
| Msa0071020 | Msa1325270 | 0.800763 | 1.237181e-48 | -8.615850e-47 |
| Msa0071020 | Msa1331900 | 0.806471 | 8.095678e-50 | -8.615850e-47 |
| Msa0071020 | Msa1336320 | 0.811392 | 7.165287e-51 | -8.615850e-47 |
| Msa0071020 | Msa1339250 | 0.806052 | 9.921177e-50 | -8.615850e-47 |
| Msa0071020 | Msa1341170 | 0.815668 | 8.214661e-52 | -8.615850e-47 |
| Msa0071020 | Msa1345470 | 0.812855 | 3.436691e-51 | -8.615850e-47 |
| Msa0071020 | Msa1348770 | 0.846130 | 2.635564e-59 | -8.615850e-47 |
| Msa0071020 | Msa1349720 | 0.815712 | 8.031146e-52 | -8.615850e-47 |
| Msa0071020 | Msa1351560 | 0.807155 | 5.803593e-50 | -8.615850e-47 |
| Msa0071020 | Msa1357760 | 0.811905 | 5.540370e-51 | -8.615850e-47 |
| Msa0071020 | Msa1367810 | 0.811441 | 6.990717e-51 | -8.615850e-47 |
| Msa0071020 | Msa1371690 | 0.828400 | 9.182336e-55 | -8.615850e-47 |
| Msa0071020 | Msa1373340 | 0.835566 | 1.557261e-56 | -8.615850e-47 |
| Msa0071020 | Msa1374610 | 0.823331 | 1.467584e-53 | -8.615850e-47 |
| Msa0071020 | Msa1374850 | 0.827566 | 1.457245e-54 | -8.615850e-47 |
| Msa0071020 | Msa1376230 | 0.819808 | 9.561565e-53 | -8.615850e-47 |
| Msa0071020 | Msa1376560 | 0.800444 | 1.437099e-48 | -8.615850e-47 |
| Msa0071020 | Msa1376590 | 0.801952 | 7.063872e-49 | -8.615850e-47 |
| Msa0071020 | Msa1381830 | 0.815934 | 7.166960e-52 | -8.615850e-47 |
| Msa0071020 | Msa1387650 | 0.825675 | 4.119399e-54 | -8.615850e-47 |
| Msa0071020 | Msa1396310 | 0.805819 | 1.110152e-49 | -8.615850e-47 |
| Msa0071020 | Msa1398840 | 0.801845 | 7.430691e-49 | -8.615850e-47 |
| Msa0071020 | Msa1403900 | 0.800468 | 1.421057e-48 | -8.615850e-47 |
| Msa0071020 | Msa1405990 | 0.806992 | 6.283179e-50 | -8.615850e-47 |
| Msa0071020 | Msa1407610 | 0.805884 | 1.076167e-49 | -8.615850e-47 |
| Msa0071020 | Msa1414280 | 0.812511 | 4.087002e-51 | -8.615850e-47 |
| Msa0071020 | Msa1420130 | 0.831253 | 1.853751e-55 | -8.615850e-47 |
| Msa0071020 | Msa1424240 | 0.847363 | 1.212858e-59 | -8.615850e-47 |
| Msa0071020 | Msa1425050 | 0.816028 | 6.828545e-52 | -8.615850e-47 |
| Msa0071020 | Msa1427020 | 0.838202 | 3.308995e-57 | -8.615850e-47 |
| Msa0071020 | Msa1429390 | 0.836059 | 1.168124e-56 | -8.615850e-47 |
| Msa0071020 | Msa1430940 | 0.865363 | 6.236102e-65 | -8.615850e-47 |
| Msa0071020 | Msa1438380 | 0.820584 | 6.349244e-53 | -8.615850e-47 |
| Msa0071020 | Msa1439800 | 0.833662 | 4.689800e-56 | -8.615850e-47 |
| Msa0071020 | Msa1444750 | 0.854303 | 1.346538e-61 | -8.615850e-47 |
| Msa0071020 | Msa1449320 | 0.840782 | 7.066707e-58 | -8.615850e-47 |
| Msa0071020 | Msa1449510 | 0.805058 | 1.603049e-49 | -8.615850e-47 |
| Msa0071020 | Msa1452080 | 0.802086 | 6.627374e-49 | -8.615850e-47 |
| Msa0071020 | Msa1455000 | 0.825710 | 4.040258e-54 | -8.615850e-47 |
| Msa0071020 | Msa1455120 | 0.841551 | 4.438267e-58 | -8.615850e-47 |
| Msa0071020 | Msa1465410 | 0.803340 | 3.653578e-49 | -8.615850e-47 |
| Msa0071020 | Msa1465950 | 0.820460 | 6.779815e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0071020 | MtrunA17_Chr1g0176471 | 97.375 | 419 | 10 | 1 | 1 | 418 | 1 | 419 | 0.0 | 837 |
| Msa0071020 | MtrunA17_Chr1g0170411 | 60.941 | 425 | 157 | 3 | 1 | 418 | 1 | 423 | 0.0 | 536 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0071020 | AT2G35840.1 | 69.267 | 423 | 124 | 3 | 1 | 418 | 1 | 422 | 0.0 | 603 |
| Msa0071020 | AT2G35840.3 | 69.267 | 423 | 124 | 3 | 1 | 418 | 1 | 422 | 0.0 | 603 |
| Msa0071020 | AT2G35840.2 | 69.267 | 423 | 124 | 3 | 1 | 418 | 1 | 422 | 0.0 | 603 |
| Msa0071020 | AT2G35840.4 | 69.267 | 423 | 124 | 3 | 1 | 418 | 1 | 422 | 0.0 | 603 |
| Msa0071020 | AT1G51420.1 | 62.972 | 424 | 150 | 4 | 1 | 418 | 1 | 423 | 0.0 | 531 |
| Msa0071020 | AT1G51420.3 | 62.972 | 424 | 150 | 4 | 1 | 418 | 2 | 424 | 0.0 | 531 |
| Msa0071020 | AT1G51420.4 | 62.972 | 424 | 150 | 4 | 1 | 418 | 2 | 424 | 0.0 | 531 |
| Msa0071020 | AT1G51420.2 | 62.972 | 424 | 150 | 4 | 1 | 418 | 2 | 424 | 0.0 | 531 |
| Msa0071020 | AT3G52340.2 | 58.354 | 413 | 170 | 2 | 1 | 412 | 1 | 412 | 8.68e-175 | 495 |
| Msa0071020 | AT3G52340.7 | 58.354 | 413 | 170 | 2 | 1 | 412 | 1 | 412 | 8.68e-175 | 495 |
| Msa0071020 | AT3G52340.1 | 58.354 | 413 | 170 | 2 | 1 | 412 | 1 | 412 | 8.68e-175 | 495 |
| Msa0071020 | AT3G52340.3 | 58.354 | 413 | 170 | 2 | 1 | 412 | 1 | 412 | 8.68e-175 | 495 |
| Msa0071020 | AT3G52340.4 | 58.354 | 413 | 170 | 2 | 1 | 412 | 13 | 424 | 9.31e-175 | 495 |
| Msa0071020 | AT3G52340.5 | 58.354 | 413 | 170 | 2 | 1 | 412 | 13 | 424 | 9.31e-175 | 495 |
| Msa0071020 | AT3G52340.6 | 58.354 | 413 | 170 | 2 | 1 | 412 | 42 | 453 | 2.66e-174 | 495 |
| Msa0071020 | AT3G54270.1 | 54.327 | 416 | 185 | 3 | 1 | 412 | 1 | 415 | 1.41e-166 | 474 |
Find 142 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAATTTACTGTTAAATTTC+TGG | 0.089250 | 1_2:+42385570 | Msa0071020:three_prime_UTR |
| CAATGTCCTTGTCCCATTTC+TGG | 0.095011 | 1_2:-42382318 | None:intergenic |
| GCCTCAGAGCGCTGTGCATC+TGG | 0.152598 | 1_2:+42383187 | Msa0071020:CDS |
| AGAGGCTCTTTCTAAGATTT+TGG | 0.167196 | 1_2:+42382618 | Msa0071020:CDS |
| TTCAGCATTCCAGGAGTTTA+TGG | 0.202008 | 1_2:+42382959 | Msa0071020:CDS |
| TCTGAGGCATGCAGAATCTT+AGG | 0.238626 | 1_2:-42383172 | None:intergenic |
| GAATAGCTCGGCATCATTTC+CGG | 0.265204 | 1_2:-42382939 | None:intergenic |
| CATCTCTTGGTGACAGGTTT+GGG | 0.277320 | 1_2:-42383243 | None:intergenic |
| TCTAATCACAGGATCAATTC+AGG | 0.290253 | 1_2:+42381787 | Msa0071020:intron |
| TACACATACCTTTCTTAGTA+TGG | 0.291808 | 1_2:-42384548 | None:intergenic |
| CATGGGACACCTTGACATTA+TGG | 0.294886 | 1_2:-42385535 | None:intergenic |
| CATCTCTGCTTGATGATAGA+TGG | 0.297160 | 1_2:+42385625 | Msa0071020:three_prime_UTR |
| GGCTGGTGAAGTTTGATAAA+TGG | 0.304367 | 1_2:+42384404 | Msa0071020:CDS |
| CACAGATAAGTTCAGATATA+TGG | 0.323387 | 1_2:+42384383 | Msa0071020:CDS |
| CACATAACATTTATTGCAAA+AGG | 0.332116 | 1_2:-42385467 | None:intergenic |
| ACATCTCTTGGTGACAGGTT+TGG | 0.339450 | 1_2:-42383244 | None:intergenic |
| TTCAAGAATTGAACCAGAAA+TGG | 0.339783 | 1_2:+42382305 | Msa0071020:CDS |
| GTGGGAACTGAGATTACTTA+TGG | 0.363501 | 1_2:+42382253 | Msa0071020:CDS |
| TGGTGCTGACCATTCTCTTA+AGG | 0.366778 | 1_2:+42384279 | Msa0071020:CDS |
| AGGGGAAACAGTTTAGGATA+TGG | 0.373276 | 1_2:+42384341 | Msa0071020:CDS |
| ACAGACATGATGGTTATATC+TGG | 0.375892 | 1_2:-42382232 | None:intergenic |
| ACAAACAGGGGAAACAGTTT+AGG | 0.376401 | 1_2:+42384335 | Msa0071020:CDS |
| GCTGTTTATTGCTGCTATAA+AGG | 0.379309 | 1_2:+42383378 | Msa0071020:CDS |
| TCTTTGCTGGTGTTCTCAAC+TGG | 0.382613 | 1_2:+42382157 | Msa0071020:CDS |
| ATATCGCCACGATTCTTTGC+TGG | 0.384082 | 1_2:+42382144 | Msa0071020:CDS |
| GCGTTATTGTTTGTCATGTT+TGG | 0.389073 | 1_2:+42385655 | Msa0071020:three_prime_UTR |
| GTTATATCTGGAGTTATCAT+AGG | 0.393312 | 1_2:-42382220 | None:intergenic |
| TTTGAGGTTCAATGCCCTTT+GGG | 0.393753 | 1_2:+42382114 | Msa0071020:CDS |
| GCCGAGCTATTCAGCATTCC+AGG | 0.396491 | 1_2:+42382950 | Msa0071020:CDS |
| TCAACATAAATGAGGAGAAA+AGG | 0.396763 | 1_2:-42385687 | None:intergenic |
| CAACATAAATGAGGAGAAAA+GGG | 0.398451 | 1_2:-42385686 | None:intergenic |
| AAAGGTGTATGGTAACAAAC+AGG | 0.400977 | 1_2:+42384321 | Msa0071020:CDS |
| CTCAGTTGTTTGTAGAGTAA+AGG | 0.417936 | 1_2:-42382187 | None:intergenic |
| GCCACTGCAGTAATTCCTCT+TGG | 0.422000 | 1_2:-42383126 | None:intergenic |
| GGTGTGTATATCCACCCTTC+TGG | 0.427354 | 1_2:+42384259 | Msa0071020:CDS |
| TGCTGGTGTTCTCAACTGGC+AGG | 0.441395 | 1_2:+42382161 | Msa0071020:CDS |
| TTTAATATGCAGGATCCATC+TGG | 0.447565 | 1_2:+42384238 | Msa0071020:intron |
| TTTGTCTGTTAAGTGAAAAG+TGG | 0.454824 | 1_2:+42383329 | Msa0071020:CDS |
| GCTGGTGAAGTTTGATAAAT+GGG | 0.455050 | 1_2:+42384405 | Msa0071020:CDS |
| TTATATACTCCTTAAGAGAA+TGG | 0.455416 | 1_2:-42384288 | None:intergenic |
| GAAGGAATGGGAGAAGAAGA+AGG | 0.468553 | 1_2:-42381292 | None:intergenic |
| TTAGTAGAAGAAGCGGCAAT+AGG | 0.471653 | 1_2:+42381192 | Msa0071020:five_prime_UTR |
| AAATCGATGGTTCCCGATGA+TGG | 0.472518 | 1_2:+42382277 | Msa0071020:CDS |
| AGTACCTGAGGCTTAAGTTC+AGG | 0.473435 | 1_2:-42382364 | None:intergenic |
| CTGAAACATCTCTTGGTGAC+AGG | 0.473592 | 1_2:-42383249 | None:intergenic |
| GCAGGCAGAAACAGAACAAC+GGG | 0.475371 | 1_2:+42382546 | Msa0071020:intron |
| TCCAGGAGTTTATGGTGTCA+TGG | 0.483135 | 1_2:+42382967 | Msa0071020:CDS |
| CTAATCACAGGATCAATTCA+GGG | 0.484788 | 1_2:+42381788 | Msa0071020:intron |
| CGATGGTTCCCGATGATGGA+TGG | 0.484939 | 1_2:+42382281 | Msa0071020:CDS |
| CCTCAGAGCGCTGTGCATCT+GGG | 0.486786 | 1_2:+42383188 | Msa0071020:CDS |
| CAAAGAATCGTGGCGATATG+AGG | 0.489310 | 1_2:-42382140 | None:intergenic |
| CCACTGCAGTAATTCCTCTT+GGG | 0.490113 | 1_2:-42383125 | None:intergenic |
| GTTTCCTGAACTTAAGCCTC+AGG | 0.490979 | 1_2:+42382360 | Msa0071020:CDS |
| TCAAGAATTGAACCAGAAAT+GGG | 0.492584 | 1_2:+42382306 | Msa0071020:CDS |
| CATTCCTTCCACTTCACTAC+CGG | 0.493142 | 1_2:+42381306 | Msa0071020:five_prime_UTR |
| AGGGATCACAAGATAGAACT+TGG | 0.497978 | 1_2:-42385447 | None:intergenic |
| ACATAACATTTATTGCAAAA+GGG | 0.499099 | 1_2:-42385466 | None:intergenic |
| CTGAGGCATGCAGAATCTTA+GGG | 0.499882 | 1_2:-42383171 | None:intergenic |
| CCAAGAGATGTTTCAGACAT+TGG | 0.503149 | 1_2:+42383256 | Msa0071020:CDS |
| ACCATGACACCATAAACTCC+TGG | 0.503899 | 1_2:-42382968 | None:intergenic |
| TATTCTTATTCTGATTCGCT+TGG | 0.505101 | 1_2:+42381227 | Msa0071020:five_prime_UTR |
| GCCCAAGTTAAAATGACCTA+TGG | 0.506142 | 1_2:-42383221 | None:intergenic |
| CGGTAGTGAAGTGGAAGGAA+TGG | 0.513803 | 1_2:-42381305 | None:intergenic |
| CTCAGTTCCCACAGACATGA+TGG | 0.515217 | 1_2:-42382242 | None:intergenic |
| AGGATTCCGATTGGTTCACC+TGG | 0.515792 | 1_2:+42385352 | Msa0071020:intron |
| CTGCATAAGTAATAGAATGA+AGG | 0.516033 | 1_2:+42385724 | Msa0071020:three_prime_UTR |
| GATAATATAGACAGTTCCTA+TGG | 0.517894 | 1_2:+42385419 | Msa0071020:exon |
| TTCTTGAACCCATCCATCAT+CGG | 0.519768 | 1_2:-42382290 | None:intergenic |
| TCTTGAACCCATCCATCATC+GGG | 0.522162 | 1_2:-42382289 | None:intergenic |
| GAAACAGTTTAGGATATGGT+TGG | 0.522204 | 1_2:+42384345 | Msa0071020:CDS |
| AAGGAATGGGAGAAGAAGAA+GGG | 0.534849 | 1_2:-42381291 | None:intergenic |
| GATATATTACCACAAGGTGC+TGG | 0.536423 | 1_2:+42382833 | Msa0071020:CDS |
| TACCATTGTGTGATCGAGAT+CGG | 0.537477 | 1_2:-42381861 | None:intergenic |
| TGTCACTACCATACTAAGAA+AGG | 0.549759 | 1_2:+42384540 | Msa0071020:CDS |
| CAGATTGTTCCAACCATGAC+TGG | 0.550666 | 1_2:-42385386 | None:intergenic |
| AATTCAGGGATTGTACATCA+TGG | 0.551630 | 1_2:+42381802 | Msa0071020:exon |
| GAGACTGAGGGAAAGCTACC+TGG | 0.551726 | 1_2:+42382893 | Msa0071020:CDS |
| GGTAGTGAAGTGGAAGGAAT+GGG | 0.552157 | 1_2:-42381304 | None:intergenic |
| ATGCATCCAGGTGAACCAAT+CGG | 0.552499 | 1_2:-42385358 | None:intergenic |
| ACGTGCAGAAGTTGAGAACT+CGG | 0.555017 | 1_2:+42383354 | Msa0071020:CDS |
| AATTTCAGATACATGTGTCA+TGG | 0.556883 | 1_2:-42385553 | None:intergenic |
| CCAATGTCTGAAACATCTCT+TGG | 0.557914 | 1_2:-42383256 | None:intergenic |
| TCCTGGAATGCTGAATAGCT+CGG | 0.559117 | 1_2:-42382951 | None:intergenic |
| ATTTCAGATACATGTGTCAT+GGG | 0.560704 | 1_2:-42385552 | None:intergenic |
| GCGATATGAGGCTTCCCAAA+GGG | 0.561720 | 1_2:-42382128 | None:intergenic |
| GCGAACTATTCTCTGCATCA+TGG | 0.563230 | 1_2:-42382090 | None:intergenic |
| AGATATAACCATCATGTCTG+TGG | 0.566248 | 1_2:+42382234 | Msa0071020:CDS |
| ACACACATTAGTAGAAGAAG+CGG | 0.567175 | 1_2:+42381185 | Msa0071020:five_prime_UTR |
| CTGTCTATATTATCCACTCA+TGG | 0.568570 | 1_2:-42385410 | None:intergenic |
| GATGGTTCCCGATGATGGAT+GGG | 0.569266 | 1_2:+42382282 | Msa0071020:CDS |
| CCACATACTAGAGTATTACC+AGG | 0.571550 | 1_2:-42382911 | None:intergenic |
| TTGGGTTTCAGGATTCCGAT+TGG | 0.574395 | 1_2:+42385343 | Msa0071020:intron |
| GAAGACCTTCCATAATGTCA+AGG | 0.574843 | 1_2:+42385526 | Msa0071020:three_prime_UTR |
| ACTCTAGTATGTGGTGACTC+CGG | 0.576428 | 1_2:+42382920 | Msa0071020:CDS |
| GATAAGTTCAGATATATGGC+TGG | 0.578111 | 1_2:+42384387 | Msa0071020:CDS |
| GATATAACCATCATGTCTGT+GGG | 0.578577 | 1_2:+42382235 | Msa0071020:CDS |
| ATTGCTTCTCAACATAAATG+AGG | 0.581998 | 1_2:-42385695 | None:intergenic |
| AGAGAATGGTCAGCACCAGA+AGG | 0.588947 | 1_2:-42384274 | None:intergenic |
| ATAGAACTTGGATAAGCCAT+AGG | 0.589361 | 1_2:-42385435 | None:intergenic |
| GGACAAGGACATTGTCATTG+AGG | 0.590293 | 1_2:+42382327 | Msa0071020:CDS |
| GGATGCATGTGCACCAGTCA+TGG | 0.590310 | 1_2:+42385373 | Msa0071020:CDS |
| TCATCAATCAACCTTCACCT+TGG | 0.592137 | 1_2:-42381159 | None:intergenic |
| AGAAGAAGAAGGGTGGTGAG+TGG | 0.595202 | 1_2:-42381281 | None:intergenic |
| GAATGGGAGAAGAAGAAGGG+TGG | 0.601091 | 1_2:-42381288 | None:intergenic |
| GATTACTTATGGAAAATCGA+TGG | 0.601557 | 1_2:+42382264 | Msa0071020:CDS |
| TTACCACAAGGTGCTGGCAA+AGG | 0.605101 | 1_2:+42382839 | Msa0071020:CDS |
| GATATGGTTGGACAATGTGT+TGG | 0.606614 | 1_2:+42384357 | Msa0071020:CDS |
| TGACCTTTGCCAGCACCTTG+TGG | 0.606824 | 1_2:-42382842 | None:intergenic |
| CCTGGTAATACTCTAGTATG+TGG | 0.607257 | 1_2:+42382911 | Msa0071020:CDS |
| TGAGTAACTAACCAAGGTGA+AGG | 0.608970 | 1_2:+42381148 | None:intergenic |
| GATGTTAAAATAATATATAG+CGG | 0.612438 | 1_2:+42382797 | Msa0071020:CDS |
| GCATGTGCACCAGTCATGGT+TGG | 0.613768 | 1_2:+42385377 | Msa0071020:CDS |
| GGGTGGATATACACACCAGA+TGG | 0.615271 | 1_2:-42384253 | None:intergenic |
| TCTGGGATTATACAAGCCAT+AGG | 0.615679 | 1_2:+42383205 | Msa0071020:CDS |
| TGGAACAATCTGACCATGAG+TGG | 0.618034 | 1_2:+42385397 | Msa0071020:CDS |
| GGCGATATGAGGCTTCCCAA+AGG | 0.620433 | 1_2:-42382129 | None:intergenic |
| AAGAAGGGTGGTGAGTGGTG+AGG | 0.622953 | 1_2:-42381276 | None:intergenic |
| TGACTGGTGCACATGCATCC+AGG | 0.624058 | 1_2:-42385370 | None:intergenic |
| AATGGTCAGCACCAGAAGGG+TGG | 0.627460 | 1_2:-42384270 | None:intergenic |
| GCCAACTTGCAGATGAAGAG+CGG | 0.631632 | 1_2:+42384506 | Msa0071020:intron |
| GAGAATGGTCAGCACCAGAA+GGG | 0.632538 | 1_2:-42384273 | None:intergenic |
| GGACACCTTGACATTATGGA+AGG | 0.637887 | 1_2:-42385531 | None:intergenic |
| AACATAAATGAGGAGAAAAG+GGG | 0.639413 | 1_2:-42385685 | None:intergenic |
| ATATAGCGGAGGAGTTGACA+TGG | 0.640245 | 1_2:+42382811 | Msa0071020:CDS |
| CCCAGATGCACAGCGCTCTG+AGG | 0.646146 | 1_2:-42383188 | None:intergenic |
| TTTGATAAATGGGAGTTACA+CGG | 0.646192 | 1_2:+42384415 | Msa0071020:CDS |
| CAATGCTAAGCAAGTGACAG+AGG | 0.647164 | 1_2:+42382600 | Msa0071020:CDS |
| CTTGCAGATGAAGAGCGGCA+TGG | 0.655839 | 1_2:+42384511 | Msa0071020:intron |
| GTTAAAATAATATATAGCGG+AGG | 0.662156 | 1_2:+42382800 | Msa0071020:CDS |
| AGGTGTATGGTAACAAACAG+GGG | 0.662925 | 1_2:+42384323 | Msa0071020:CDS |
| TTCCGATCTCGATCACACAA+TGG | 0.663470 | 1_2:+42381859 | Msa0071020:CDS |
| GTAGGTAAGCAACGCCCAAG+AGG | 0.666196 | 1_2:+42383111 | Msa0071020:intron |
| ATTACCGGTAGTGAAGTGGA+AGG | 0.668731 | 1_2:-42381310 | None:intergenic |
| CCCAAGAGGAATTACTGCAG+TGG | 0.669784 | 1_2:+42383125 | Msa0071020:CDS |
| TGCAGGCAGAAACAGAACAA+CGG | 0.681696 | 1_2:+42382545 | Msa0071020:intron |
| ATAGAGTGAGTAACTAACCA+AGG | 0.682792 | 1_2:+42381142 | None:intergenic |
| CTTTACTCTACAAACAACTG+AGG | 0.684288 | 1_2:+42382188 | Msa0071020:CDS |
| AAGGTGTATGGTAACAAACA+GGG | 0.688423 | 1_2:+42384322 | Msa0071020:CDS |
| AGAACACCAGCAAAGAATCG+TGG | 0.694109 | 1_2:-42382150 | None:intergenic |
| ATTGAACCAGAAATGGGACA+AGG | 0.722798 | 1_2:+42382312 | Msa0071020:CDS |
| GACATGGATATATTACCACA+AGG | 0.735098 | 1_2:+42382827 | Msa0071020:CDS |
| ATAGACTCAAATCTTCTGCG+CGG | 0.750289 | 1_2:+42381825 | Msa0071020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTAATTTAAAGTACAAT+TGG | + | chr1_2:42381615-42381634 | Msa0071020:intron | 10.0% |
| !!! | ATTTAATTTAAAGTACAATT+GGG | + | chr1_2:42381616-42381635 | Msa0071020:intron | 10.0% |
| !! | TAAAAAAAATACTGAAAATA+TGG | - | chr1_2:42383017-42383036 | None:intergenic | 10.0% |
| !! | AGAAATGAGATTAAAAAAAA+TGG | - | chr1_2:42381429-42381448 | None:intergenic | 15.0% |
| !! | GATGTTAAAATAATATATAG+CGG | + | chr1_2:42382797-42382816 | Msa0071020:CDS | 15.0% |
| !!! | TTAGATTATTAGTCTAAAAT+TGG | + | chr1_2:42383051-42383070 | Msa0071020:intron | 15.0% |
| !!! | TAGATTATTAGTCTAAAATT+GGG | + | chr1_2:42383052-42383071 | Msa0071020:intron | 15.0% |
| !!! | ATCATTAGTTATTTTTTATG+TGG | + | chr1_2:42383949-42383968 | Msa0071020:intron | 15.0% |
| !!! | GTATATAAATATTTTGAGAA+AGG | + | chr1_2:42384303-42384322 | Msa0071020:CDS | 15.0% |
| !! | TTAAAAGACTTAAATTTCAT+AGG | - | chr1_2:42385016-42385035 | None:intergenic | 15.0% |
| !!! | ATTTTCACAATATTTTTACA+CGG | + | chr1_2:42385291-42385310 | Msa0071020:intron | 15.0% |
| !! | AAGAAAGAAAGAAAGAAATT+GGG | - | chr1_2:42381363-42381382 | None:intergenic | 20.0% |
| !! | AAAGAAAGAAAGAAAGAAAT+TGG | - | chr1_2:42381364-42381383 | None:intergenic | 20.0% |
| !! | CATCATAATGATGATTTATT+TGG | + | chr1_2:42381669-42381688 | Msa0071020:intron | 20.0% |
| !!! | TGATTCATATTTTGAATGAT+CGG | + | chr1_2:42382519-42382538 | Msa0071020:intron | 20.0% |
| !!! | ATATTATTTTAACATCCAAC+TGG | - | chr1_2:42382793-42382812 | None:intergenic | 20.0% |
| !! | AAAAATACTGAAAATATGGT+TGG | - | chr1_2:42383013-42383032 | None:intergenic | 20.0% |
| !!! | TGCTTTAGTAAAAAGAATTT+TGG | - | chr1_2:42383497-42383516 | None:intergenic | 20.0% |
| !! | AAAAAAAAAATGCACCAAAA+AGG | - | chr1_2:42383521-42383540 | None:intergenic | 20.0% |
| !!! | TTTGGTAATATTTTCTACTT+TGG | + | chr1_2:42383832-42383851 | Msa0071020:intron | 20.0% |
| !!! | TATTATCTTGTTTTGACAAT+TGG | + | chr1_2:42383876-42383895 | Msa0071020:intron | 20.0% |
| !!! | ACTATTTTGTTTTAATATGC+AGG | + | chr1_2:42384228-42384247 | Msa0071020:intron | 20.0% |
| !!! | GTAATGCATAAGTATTTTTA+TGG | + | chr1_2:42384568-42384587 | Msa0071020:intron | 20.0% |
| !! | TTCAATATATGTTTATCACT+AGG | + | chr1_2:42384907-42384926 | Msa0071020:intron | 20.0% |
| !! | TCAATATATGTTTATCACTA+GGG | + | chr1_2:42384908-42384927 | Msa0071020:intron | 20.0% |
| !! | TTGCTAATAAGAATGAAATT+TGG | + | chr1_2:42385324-42385343 | Msa0071020:intron | 20.0% |
| !! | TGCTAATAAGAATGAAATTT+GGG | + | chr1_2:42385325-42385344 | Msa0071020:intron | 20.0% |
| !! | ACATAACATTTATTGCAAAA+GGG | - | chr1_2:42385469-42385488 | None:intergenic | 20.0% |
| !! | GAAATTTACTGTTAAATTTC+TGG | + | chr1_2:42385570-42385589 | Msa0071020:three_prime_UTR | 20.0% |
| ! | AAAGGGAAATGAAAAATTAC+CGG | - | chr1_2:42381328-42381347 | None:intergenic | 25.0% |
| !! | TTATCGAGAAATGGAAATTT+TGG | - | chr1_2:42381405-42381424 | None:intergenic | 25.0% |
| ! | AAAAATGGTTTATCGAGAAA+TGG | - | chr1_2:42381414-42381433 | None:intergenic | 25.0% |
| ! | GATTTGTATTGTTGAAATTG+TGG | - | chr1_2:42381540-42381559 | None:intergenic | 25.0% |
| !!! | GTGTATTTTAGTGACTAAAT+TGG | - | chr1_2:42381578-42381597 | None:intergenic | 25.0% |
| ! | TAATTTCTGTTTATGAAGAG+AGG | + | chr1_2:42381696-42381715 | Msa0071020:intron | 25.0% |
| ! | AATTTCTGTTTATGAAGAGA+GGG | + | chr1_2:42381697-42381716 | Msa0071020:intron | 25.0% |
| ! | TTTGTTGAATTTCTAATCAC+AGG | + | chr1_2:42381776-42381795 | Msa0071020:intron | 25.0% |
| ! | CGAGAAAAACATAATACTAA+TGG | - | chr1_2:42381917-42381936 | None:intergenic | 25.0% |
| !! | ATTATTAGTTTGAGCAACAA+TGG | + | chr1_2:42382480-42382499 | Msa0071020:intron | 25.0% |
| ! | GAAATCATTTCTGAGTAAAA+TGG | - | chr1_2:42382677-42382696 | None:intergenic | 25.0% |
| ! | CAAACAATTACACAATGTTA+TGG | - | chr1_2:42382770-42382789 | None:intergenic | 25.0% |
| ! | GTTAAAATAATATATAGCGG+AGG | + | chr1_2:42382800-42382819 | Msa0071020:CDS | 25.0% |
| !!! | CTCAAACTTTTTAAGCAAAT+AGG | - | chr1_2:42382876-42382895 | None:intergenic | 25.0% |
| ! | ATGCATAAAGAACATACAAT+AGG | - | chr1_2:42383444-42383463 | None:intergenic | 25.0% |
| !!! | TTTTACTAAAGCATCCTTTT+TGG | + | chr1_2:42383504-42383523 | Msa0071020:intron | 25.0% |
| !!! | TTTTTCATTTTCGAGTTTCA+TGG | + | chr1_2:42383540-42383559 | Msa0071020:intron | 25.0% |
| !! | TTTTTATCTATATCTTCCGA+AGG | + | chr1_2:42383627-42383646 | Msa0071020:intron | 25.0% |
| !! | ATGCATCTAAAGTTAAATCA+AGG | - | chr1_2:42383800-42383819 | None:intergenic | 25.0% |
| !! | TGATTTAACTTTAGATGCAT+TGG | + | chr1_2:42383800-42383819 | Msa0071020:intron | 25.0% |
| ! | GTTCAACCATTATAACAATT+CGG | + | chr1_2:42384046-42384065 | Msa0071020:intron | 25.0% |
| ! | TCTATTCCGAATTGTTATAA+TGG | - | chr1_2:42384055-42384074 | None:intergenic | 25.0% |
| ! | TTATATACTCCTTAAGAGAA+TGG | - | chr1_2:42384291-42384310 | None:intergenic | 25.0% |
| !!! | AATATTTTGAGAAAGGTGTA+TGG | + | chr1_2:42384310-42384329 | Msa0071020:CDS | 25.0% |
| !!! | GGTTTTTAAGAAAACAATGA+AGG | - | chr1_2:42384700-42384719 | None:intergenic | 25.0% |
| ! | ATTGTGCAAGAACTAATTAT+TGG | - | chr1_2:42385043-42385062 | None:intergenic | 25.0% |
| ! | TGACAAATTTATCCCTAAAA+TGG | + | chr1_2:42385072-42385091 | Msa0071020:intron | 25.0% |
| !! | ATGAAATGTAGACCATTTTA+GGG | - | chr1_2:42385087-42385106 | None:intergenic | 25.0% |
| !! | TATGAAATGTAGACCATTTT+AGG | - | chr1_2:42385088-42385107 | None:intergenic | 25.0% |
| ! | GTGAAAATGCAAATTAGTAA+CGG | - | chr1_2:42385279-42385298 | None:intergenic | 25.0% |
| ! | CACATAACATTTATTGCAAA+AGG | - | chr1_2:42385470-42385489 | None:intergenic | 25.0% |
| ! | TATTCTTATTCTGATTCGCT+TGG | + | chr1_2:42381227-42381246 | Msa0071020:five_prime_UTR | 30.0% |
| AAGTACAATTGGGACTAAAT+TGG | + | chr1_2:42381626-42381645 | Msa0071020:intron | 30.0% | |
| ATTTCTGTTTATGAAGAGAG+GGG | + | chr1_2:42381698-42381717 | Msa0071020:intron | 30.0% | |
| ! | TCACACAATGGTATATTTTG+TGG | + | chr1_2:42381871-42381890 | Msa0071020:intron | 30.0% |
| ! | GTTATATCTGGAGTTATCAT+AGG | - | chr1_2:42382223-42382242 | None:intergenic | 30.0% |
| GATTACTTATGGAAAATCGA+TGG | + | chr1_2:42382264-42382283 | Msa0071020:CDS | 30.0% | |
| TTCAAGAATTGAACCAGAAA+TGG | + | chr1_2:42382305-42382324 | Msa0071020:CDS | 30.0% | |
| TCAAGAATTGAACCAGAAAT+GGG | + | chr1_2:42382306-42382325 | Msa0071020:CDS | 30.0% | |
| ! | TTATTGTTTTCTGTGAACCA+TGG | + | chr1_2:42382417-42382436 | Msa0071020:intron | 30.0% |
| CAAATCATGTGTATATACGT+TGG | + | chr1_2:42382700-42382719 | Msa0071020:intron | 30.0% | |
| ! | CTTAAAAAGTTTGAGACTGA+GGG | + | chr1_2:42382881-42382900 | Msa0071020:CDS | 30.0% |
| ! | AGGGTTATCTTTTGCATTTT+CGG | - | chr1_2:42383155-42383174 | None:intergenic | 30.0% |
| TTTGTCTGTTAAGTGAAAAG+TGG | + | chr1_2:42383329-42383348 | Msa0071020:CDS | 30.0% | |
| TAGGCAATCTGTAAAAGTAA+GGG | - | chr1_2:42383425-42383444 | None:intergenic | 30.0% | |
| ATAGGCAATCTGTAAAAGTA+AGG | - | chr1_2:42383426-42383445 | None:intergenic | 30.0% | |
| AAATTCTGAGTATACCAAAC+AGG | + | chr1_2:42383569-42383588 | Msa0071020:intron | 30.0% | |
| !! | TTGCTTTTCAATTTCCTGTT+TGG | - | chr1_2:42383586-42383605 | None:intergenic | 30.0% |
| !! | AACTTGCTAAAGCTTAATCA+AGG | - | chr1_2:42383678-42383697 | None:intergenic | 30.0% |
| !! | CAAGTTCTGAGTTTACAAAA+AGG | + | chr1_2:42383692-42383711 | Msa0071020:intron | 30.0% |
| ATGTAAAAACTGCACAAATG+CGG | - | chr1_2:42383776-42383795 | None:intergenic | 30.0% | |
| ! | TCTGTTGATGAAAGATATTC+TGG | - | chr1_2:42383918-42383937 | None:intergenic | 30.0% |
| GTGATCAAGAAAAGAGATTA+TGG | - | chr1_2:42384152-42384171 | None:intergenic | 30.0% | |
| CACAGATAAGTTCAGATATA+TGG | + | chr1_2:42384383-42384402 | Msa0071020:CDS | 30.0% | |
| TTTGATAAATGGGAGTTACA+CGG | + | chr1_2:42384415-42384434 | Msa0071020:CDS | 30.0% | |
| AGTTCGAGAGATATAAAAGA+GGG | - | chr1_2:42384485-42384504 | None:intergenic | 30.0% | |
| AAGTTCGAGAGATATAAAAG+AGG | - | chr1_2:42384486-42384505 | None:intergenic | 30.0% | |
| TACACATACCTTTCTTAGTA+TGG | - | chr1_2:42384551-42384570 | None:intergenic | 30.0% | |
| TATGGAGTGAATAAGCAAAT+TGG | + | chr1_2:42384586-42384605 | Msa0071020:intron | 30.0% | |
| AAATCAAACGGGAAAAAACA+CGG | + | chr1_2:42384739-42384758 | Msa0071020:intron | 30.0% | |
| GGTAAATCTGAAAAAAGAAC+AGG | + | chr1_2:42384780-42384799 | Msa0071020:intron | 30.0% | |
| !! | ATTGTTTTTCAGAACAACTG+TGG | + | chr1_2:42384838-42384857 | Msa0071020:intron | 30.0% |
| !! | TTGTTTTTCAGAACAACTGT+GGG | + | chr1_2:42384839-42384858 | Msa0071020:intron | 30.0% |
| TTCATAACCTTTAACGCAAA+AGG | + | chr1_2:42385181-42385200 | Msa0071020:intron | 30.0% | |
| TCATAACCTTTAACGCAAAA+GGG | + | chr1_2:42385182-42385201 | Msa0071020:intron | 30.0% | |
| ! | TTTTCCGTTTGGTAAAAATG+AGG | + | chr1_2:42385242-42385261 | Msa0071020:intron | 30.0% |
| TTTCCGTTTGGTAAAAATGA+GGG | + | chr1_2:42385243-42385262 | Msa0071020:intron | 30.0% | |
| ! | AAGAATGAAATTTGGGTTTC+AGG | + | chr1_2:42385332-42385351 | Msa0071020:intron | 30.0% |
| GATAATATAGACAGTTCCTA+TGG | + | chr1_2:42385419-42385438 | Msa0071020:exon | 30.0% | |
| ATTTCAGATACATGTGTCAT+GGG | - | chr1_2:42385555-42385574 | None:intergenic | 30.0% | |
| AATTTCAGATACATGTGTCA+TGG | - | chr1_2:42385556-42385575 | None:intergenic | 30.0% | |
| AACATAAATGAGGAGAAAAG+GGG | - | chr1_2:42385688-42385707 | None:intergenic | 30.0% | |
| CAACATAAATGAGGAGAAAA+GGG | - | chr1_2:42385689-42385708 | None:intergenic | 30.0% | |
| TCAACATAAATGAGGAGAAA+AGG | - | chr1_2:42385690-42385709 | None:intergenic | 30.0% | |
| ATTGCTTCTCAACATAAATG+AGG | - | chr1_2:42385698-42385717 | None:intergenic | 30.0% | |
| CTGCATAAGTAATAGAATGA+AGG | + | chr1_2:42385724-42385743 | Msa0071020:three_prime_UTR | 30.0% | |
| ACACACATTAGTAGAAGAAG+CGG | + | chr1_2:42381185-42381204 | Msa0071020:five_prime_UTR | 35.0% | |
| AAAAATTACCGGTAGTGAAG+TGG | - | chr1_2:42381317-42381336 | None:intergenic | 35.0% | |
| TTGGGTAAAGCAAGAAGAAA+GGG | - | chr1_2:42381345-42381364 | None:intergenic | 35.0% | |
| ATTGGGTAAAGCAAGAAGAA+AGG | - | chr1_2:42381346-42381365 | None:intergenic | 35.0% | |
| !! | GGAAATTTTGGTAGCTTGAT+TGG | - | chr1_2:42381393-42381412 | None:intergenic | 35.0% |
| ! | ACTGTGTCGAATTGTTGTTA+AGG | + | chr1_2:42381452-42381471 | Msa0071020:intron | 35.0% |
| TCTAATCACAGGATCAATTC+AGG | + | chr1_2:42381787-42381806 | Msa0071020:intron | 35.0% | |
| CTAATCACAGGATCAATTCA+GGG | + | chr1_2:42381788-42381807 | Msa0071020:intron | 35.0% | |
| AATTCAGGGATTGTACATCA+TGG | + | chr1_2:42381802-42381821 | Msa0071020:exon | 35.0% | |
| ! | GTTGATATGTTTCTGATTGC+AGG | + | chr1_2:42382060-42382079 | Msa0071020:intron | 35.0% |
| CTCAGTTGTTTGTAGAGTAA+AGG | - | chr1_2:42382190-42382209 | None:intergenic | 35.0% | |
| CTTTACTCTACAAACAACTG+AGG | + | chr1_2:42382188-42382207 | Msa0071020:CDS | 35.0% | |
| ACAGACATGATGGTTATATC+TGG | - | chr1_2:42382235-42382254 | None:intergenic | 35.0% | |
| AGATATAACCATCATGTCTG+TGG | + | chr1_2:42382234-42382253 | Msa0071020:CDS | 35.0% | |
| GATATAACCATCATGTCTGT+GGG | + | chr1_2:42382235-42382254 | Msa0071020:CDS | 35.0% | |
| GGTATTCACTGTGATTTGAT+TGG | + | chr1_2:42382394-42382413 | Msa0071020:intron | 35.0% | |
| !!! | AGAGGCTCTTTCTAAGATTT+TGG | + | chr1_2:42382618-42382637 | Msa0071020:CDS | 35.0% |
| TTGTGTAATTGTTTGCCAGT+TGG | + | chr1_2:42382775-42382794 | Msa0071020:intron | 35.0% | |
| GACATGGATATATTACCACA+AGG | + | chr1_2:42382827-42382846 | Msa0071020:CDS | 35.0% | |
| ! | GCTTAAAAAGTTTGAGACTG+AGG | + | chr1_2:42382880-42382899 | Msa0071020:CDS | 35.0% |
| !! | TGCATCTGTTTCTGTTCATT+GGG | + | chr1_2:42383089-42383108 | Msa0071020:intron | 35.0% |
| !!! | AGCCATAGGTCATTTTAACT+TGG | + | chr1_2:42383219-42383238 | Msa0071020:CDS | 35.0% |
| !!! | GCCATAGGTCATTTTAACTT+GGG | + | chr1_2:42383220-42383239 | Msa0071020:CDS | 35.0% |
| GCTGTTTATTGCTGCTATAA+AGG | + | chr1_2:42383378-42383397 | Msa0071020:CDS | 35.0% | |
| AAGGGATATCAATCATACAG+TGG | - | chr1_2:42383407-42383426 | None:intergenic | 35.0% | |
| ATGCAAAAACTGCACAAATG+AGG | - | chr1_2:42383654-42383673 | None:intergenic | 35.0% | |
| ATTCGGAATAGACATTTCCA+TGG | + | chr1_2:42384063-42384082 | Msa0071020:intron | 35.0% | |
| TTCGGAATAGACATTTCCAT+GGG | + | chr1_2:42384064-42384083 | Msa0071020:intron | 35.0% | |
| TCAAGAAAAGAGATTATGGC+AGG | - | chr1_2:42384148-42384167 | None:intergenic | 35.0% | |
| AACTCTTGCATAAAGACTCA+TGG | - | chr1_2:42384187-42384206 | None:intergenic | 35.0% | |
| TTTAATATGCAGGATCCATC+TGG | + | chr1_2:42384238-42384257 | Msa0071020:intron | 35.0% | |
| ! | AAAGGTGTATGGTAACAAAC+AGG | + | chr1_2:42384321-42384340 | Msa0071020:CDS | 35.0% |
| AAGGTGTATGGTAACAAACA+GGG | + | chr1_2:42384322-42384341 | Msa0071020:CDS | 35.0% | |
| ! | GAAACAGTTTAGGATATGGT+TGG | + | chr1_2:42384345-42384364 | Msa0071020:CDS | 35.0% |
| GATAAGTTCAGATATATGGC+TGG | + | chr1_2:42384387-42384406 | Msa0071020:CDS | 35.0% | |
| GCTGGTGAAGTTTGATAAAT+GGG | + | chr1_2:42384405-42384424 | Msa0071020:CDS | 35.0% | |
| TTCGAGAGATATAAAAGAGG+GGG | - | chr1_2:42384483-42384502 | None:intergenic | 35.0% | |
| GTTCGAGAGATATAAAAGAG+GGG | - | chr1_2:42384484-42384503 | None:intergenic | 35.0% | |
| TGTCACTACCATACTAAGAA+AGG | + | chr1_2:42384540-42384559 | Msa0071020:CDS | 35.0% | |
| !!! | ATAGTCTGCTTTTTGCGAAT+TGG | + | chr1_2:42384636-42384655 | Msa0071020:intron | 35.0% |
| !! | TTTGATTTGGTAAATCCGGA+GGG | - | chr1_2:42384727-42384746 | None:intergenic | 35.0% |
| TCCGGATTTACCAAATCAAA+CGG | + | chr1_2:42384727-42384746 | Msa0071020:intron | 35.0% | |
| !!! | GTGTTTTTTCCCGTTTGATT+TGG | - | chr1_2:42384740-42384759 | None:intergenic | 35.0% |
| ! | AAACACGGCTTTTCTAATGT+TGG | + | chr1_2:42384754-42384773 | Msa0071020:intron | 35.0% |
| ! | AATAGTCCCTTTTGCGTTAA+AGG | - | chr1_2:42385191-42385210 | None:intergenic | 35.0% |
| ! | TCGTGAATGTATTTTCCGTT+TGG | + | chr1_2:42385231-42385250 | Msa0071020:intron | 35.0% |
| !! | AGTCCCTCATTTTTACCAAA+CGG | - | chr1_2:42385249-42385268 | None:intergenic | 35.0% |
| CTGTCTATATTATCCACTCA+TGG | - | chr1_2:42385413-42385432 | None:intergenic | 35.0% | |
| ATAGAACTTGGATAAGCCAT+AGG | - | chr1_2:42385438-42385457 | None:intergenic | 35.0% | |
| GCGTTATTGTTTGTCATGTT+TGG | + | chr1_2:42385655-42385674 | Msa0071020:three_prime_UTR | 35.0% | |
| TCATCAATCAACCTTCACCT+TGG | - | chr1_2:42381162-42381181 | None:intergenic | 40.0% | |
| TTAGTAGAAGAAGCGGCAAT+AGG | + | chr1_2:42381192-42381211 | Msa0071020:five_prime_UTR | 40.0% | |
| AAGGAATGGGAGAAGAAGAA+GGG | - | chr1_2:42381294-42381313 | None:intergenic | 40.0% | |
| ATAGACTCAAATCTTCTGCG+CGG | + | chr1_2:42381825-42381844 | Msa0071020:CDS | 40.0% | |
| TACCATTGTGTGATCGAGAT+CGG | - | chr1_2:42381864-42381883 | None:intergenic | 40.0% | |
| TAGTGAACCTGTGATTTGAG+CGG | + | chr1_2:42382038-42382057 | Msa0071020:intron | 40.0% | |
| ATATCAACCGCTCAAATCAC+AGG | - | chr1_2:42382048-42382067 | None:intergenic | 40.0% | |
| !! | CAGAGAATAGTTCGCTTTTG+AGG | + | chr1_2:42382098-42382117 | Msa0071020:CDS | 40.0% |
| !!! | TTTTGAGGTTCAATGCCCTT+TGG | + | chr1_2:42382113-42382132 | Msa0071020:CDS | 40.0% |
| ! | TTTGAGGTTCAATGCCCTTT+GGG | + | chr1_2:42382114-42382133 | Msa0071020:CDS | 40.0% |
| GTGGGAACTGAGATTACTTA+TGG | + | chr1_2:42382253-42382272 | Msa0071020:CDS | 40.0% | |
| TTCTTGAACCCATCCATCAT+CGG | - | chr1_2:42382293-42382312 | None:intergenic | 40.0% | |
| ATTGAACCAGAAATGGGACA+AGG | + | chr1_2:42382312-42382331 | Msa0071020:CDS | 40.0% | |
| ! | ATACCTACTCAAAGTACCTG+AGG | - | chr1_2:42382379-42382398 | None:intergenic | 40.0% |
| ! | TTTTCTGTGAACCATGGTTC+AGG | + | chr1_2:42382423-42382442 | Msa0071020:intron | 40.0% |
| CAACAATGGCTTCAATCAAG+TGG | + | chr1_2:42382494-42382513 | Msa0071020:intron | 40.0% | |
| ! | TTTTGAATGATCGGTACTGC+AGG | + | chr1_2:42382528-42382547 | Msa0071020:intron | 40.0% |
| !!! | TCTAAGATTTTGGAACAGCG+CGG | + | chr1_2:42382628-42382647 | Msa0071020:CDS | 40.0% |
| GATATATTACCACAAGGTGC+TGG | + | chr1_2:42382833-42382852 | Msa0071020:CDS | 40.0% | |
| ! | CCACATACTAGAGTATTACC+AGG | - | chr1_2:42382914-42382933 | None:intergenic | 40.0% |
| CCTGGTAATACTCTAGTATG+TGG | + | chr1_2:42382911-42382930 | Msa0071020:CDS | 40.0% | |
| TTCAGCATTCCAGGAGTTTA+TGG | + | chr1_2:42382959-42382978 | Msa0071020:CDS | 40.0% | |
| !! | CTGCATCTGTTTCTGTTCAT+TGG | + | chr1_2:42383088-42383107 | Msa0071020:intron | 40.0% |
| !! | TCTGTTTCTGTTCATTGGGT+AGG | + | chr1_2:42383093-42383112 | Msa0071020:intron | 40.0% |
| ! | TCTGGGATTATACAAGCCAT+AGG | + | chr1_2:42383205-42383224 | Msa0071020:CDS | 40.0% |
| GCCCAAGTTAAAATGACCTA+TGG | - | chr1_2:42383224-42383243 | None:intergenic | 40.0% | |
| ! | CCAATGTCTGAAACATCTCT+TGG | - | chr1_2:42383259-42383278 | None:intergenic | 40.0% |
| CCAAGAGATGTTTCAGACAT+TGG | + | chr1_2:42383256-42383275 | Msa0071020:CDS | 40.0% | |
| GGACTACATTTCAAATACGC+AGG | - | chr1_2:42383476-42383495 | None:intergenic | 40.0% | |
| ! | ATGCATTGGTCACTTTGCTT+TGG | + | chr1_2:42383814-42383833 | Msa0071020:intron | 40.0% |
| GAAAAGAGATTATGGCAGGA+AGG | - | chr1_2:42384144-42384163 | None:intergenic | 40.0% | |
| AGGTGTATGGTAACAAACAG+GGG | + | chr1_2:42384323-42384342 | Msa0071020:CDS | 40.0% | |
| ACAAACAGGGGAAACAGTTT+AGG | + | chr1_2:42384335-42384354 | Msa0071020:CDS | 40.0% | |
| ! | AGGGGAAACAGTTTAGGATA+TGG | + | chr1_2:42384341-42384360 | Msa0071020:CDS | 40.0% |
| GATATGGTTGGACAATGTGT+TGG | + | chr1_2:42384357-42384376 | Msa0071020:CDS | 40.0% | |
| GGCTGGTGAAGTTTGATAAA+TGG | + | chr1_2:42384404-42384423 | Msa0071020:CDS | 40.0% | |
| !! | TTGATTTGGTAAATCCGGAG+GGG | - | chr1_2:42384726-42384745 | None:intergenic | 40.0% |
| !! | GTTTGATTTGGTAAATCCGG+AGG | - | chr1_2:42384728-42384747 | None:intergenic | 40.0% |
| !! | CCCGTTTGATTTGGTAAATC+CGG | - | chr1_2:42384731-42384750 | None:intergenic | 40.0% |
| CCGGATTTACCAAATCAAAC+GGG | + | chr1_2:42384728-42384747 | Msa0071020:intron | 40.0% | |
| ! | ACGGCTTTTCTAATGTTGGA+TGG | + | chr1_2:42384758-42384777 | Msa0071020:intron | 40.0% |
| ! | CGGCTTTTCTAATGTTGGAT+GGG | + | chr1_2:42384759-42384778 | Msa0071020:intron | 40.0% |
| !! | TTTTTCAGAACAACTGTGGG+TGG | + | chr1_2:42384842-42384861 | Msa0071020:intron | 40.0% |
| ! | TTTTCAGAACAACTGTGGGT+GGG | + | chr1_2:42384843-42384862 | Msa0071020:intron | 40.0% |
| TATCACTAGGGACTATGATG+TGG | + | chr1_2:42384920-42384939 | Msa0071020:intron | 40.0% | |
| AATGATGTGGGACTAACATG+GGG | - | chr1_2:42384969-42384988 | None:intergenic | 40.0% | |
| CAATGATGTGGGACTAACAT+GGG | - | chr1_2:42384970-42384989 | None:intergenic | 40.0% | |
| TAGTATGGTGGCAATGATGT+GGG | - | chr1_2:42384981-42385000 | None:intergenic | 40.0% | |
| AGTCTCTAGTAAGCTAGCAT+TGG | + | chr1_2:42385116-42385135 | Msa0071020:intron | 40.0% | |
| AGGGATCACAAGATAGAACT+TGG | - | chr1_2:42385450-42385469 | None:intergenic | 40.0% | |
| GAAGACCTTCCATAATGTCA+AGG | + | chr1_2:42385526-42385545 | Msa0071020:three_prime_UTR | 40.0% | |
| ! | CATCTCTGCTTGATGATAGA+TGG | + | chr1_2:42385625-42385644 | Msa0071020:three_prime_UTR | 40.0% |
| GAAGGAATGGGAGAAGAAGA+AGG | - | chr1_2:42381295-42381314 | None:intergenic | 45.0% | |
| GGTAGTGAAGTGGAAGGAAT+GGG | - | chr1_2:42381307-42381326 | None:intergenic | 45.0% | |
| CATTCCTTCCACTTCACTAC+CGG | + | chr1_2:42381306-42381325 | Msa0071020:five_prime_UTR | 45.0% | |
| ATTACCGGTAGTGAAGTGGA+AGG | - | chr1_2:42381313-42381332 | None:intergenic | 45.0% | |
| TTCCGATCTCGATCACACAA+TGG | + | chr1_2:42381859-42381878 | Msa0071020:CDS | 45.0% | |
| ACGTTGACACCAACATGTGT+CGG | + | chr1_2:42382000-42382019 | Msa0071020:intron | 45.0% | |
| GTGTGATATCCGACACATGT+TGG | - | chr1_2:42382012-42382031 | None:intergenic | 45.0% | |
| GCGAACTATTCTCTGCATCA+TGG | - | chr1_2:42382093-42382112 | None:intergenic | 45.0% | |
| CAAAGAATCGTGGCGATATG+AGG | - | chr1_2:42382143-42382162 | None:intergenic | 45.0% | |
| ATATCGCCACGATTCTTTGC+TGG | + | chr1_2:42382144-42382163 | Msa0071020:CDS | 45.0% | |
| AGAACACCAGCAAAGAATCG+TGG | - | chr1_2:42382153-42382172 | None:intergenic | 45.0% | |
| TCTTTGCTGGTGTTCTCAAC+TGG | + | chr1_2:42382157-42382176 | Msa0071020:CDS | 45.0% | |
| AAATCGATGGTTCCCGATGA+TGG | + | chr1_2:42382277-42382296 | Msa0071020:CDS | 45.0% | |
| TCTTGAACCCATCCATCATC+GGG | - | chr1_2:42382292-42382311 | None:intergenic | 45.0% | |
| CAATGTCCTTGTCCCATTTC+TGG | - | chr1_2:42382321-42382340 | None:intergenic | 45.0% | |
| GGACAAGGACATTGTCATTG+AGG | + | chr1_2:42382327-42382346 | Msa0071020:CDS | 45.0% | |
| GTTTCCTGAACTTAAGCCTC+AGG | + | chr1_2:42382360-42382379 | Msa0071020:CDS | 45.0% | |
| AGTACCTGAGGCTTAAGTTC+AGG | - | chr1_2:42382367-42382386 | None:intergenic | 45.0% | |
| AAGCCTCAGGTACTTTGAGT+AGG | + | chr1_2:42382373-42382392 | Msa0071020:intron | 45.0% | |
| TGCAGGCAGAAACAGAACAA+CGG | + | chr1_2:42382545-42382564 | Msa0071020:intron | 45.0% | |
| CAATGCTAAGCAAGTGACAG+AGG | + | chr1_2:42382600-42382619 | Msa0071020:CDS | 45.0% | |
| !!! | CTAAGATTTTGGAACAGCGC+GGG | + | chr1_2:42382629-42382648 | Msa0071020:CDS | 45.0% |
| !!! | TAAGATTTTGGAACAGCGCG+GGG | + | chr1_2:42382630-42382649 | Msa0071020:CDS | 45.0% |
| ! | ATATAGCGGAGGAGTTGACA+TGG | + | chr1_2:42382811-42382830 | Msa0071020:CDS | 45.0% |
| ACTCTAGTATGTGGTGACTC+CGG | + | chr1_2:42382920-42382939 | Msa0071020:CDS | 45.0% | |
| GAATAGCTCGGCATCATTTC+CGG | - | chr1_2:42382942-42382961 | None:intergenic | 45.0% | |
| TCCTGGAATGCTGAATAGCT+CGG | - | chr1_2:42382954-42382973 | None:intergenic | 45.0% | |
| ! | TCCAGGAGTTTATGGTGTCA+TGG | + | chr1_2:42382967-42382986 | Msa0071020:CDS | 45.0% |
| ACCATGACACCATAAACTCC+TGG | - | chr1_2:42382971-42382990 | None:intergenic | 45.0% | |
| !! | GGAGTTTATGGTGTCATGGT+TGG | + | chr1_2:42382971-42382990 | Msa0071020:intron | 45.0% |
| CCACTGCAGTAATTCCTCTT+GGG | - | chr1_2:42383128-42383147 | None:intergenic | 45.0% | |
| CTGAGGCATGCAGAATCTTA+GGG | - | chr1_2:42383174-42383193 | None:intergenic | 45.0% | |
| ! | TCTGAGGCATGCAGAATCTT+AGG | - | chr1_2:42383175-42383194 | None:intergenic | 45.0% |
| ! | CATCTCTTGGTGACAGGTTT+GGG | - | chr1_2:42383246-42383265 | None:intergenic | 45.0% |
| ! | ACATCTCTTGGTGACAGGTT+TGG | - | chr1_2:42383247-42383266 | None:intergenic | 45.0% |
| ! | CTGAAACATCTCTTGGTGAC+AGG | - | chr1_2:42383252-42383271 | None:intergenic | 45.0% |
| ACGTGCAGAAGTTGAGAACT+CGG | + | chr1_2:42383354-42383373 | Msa0071020:CDS | 45.0% | |
| ACTGCACAAATGAGGTCCTT+CGG | - | chr1_2:42383646-42383665 | None:intergenic | 45.0% | |
| ACTTTAGTGCAGTTCTCCCA+TGG | - | chr1_2:42384083-42384102 | None:intergenic | 45.0% | |
| !! | TGGTGCTGACCATTCTCTTA+AGG | + | chr1_2:42384279-42384298 | Msa0071020:CDS | 45.0% |
| GTCCTCAAAATCGTTAGCGT+AGG | + | chr1_2:42384608-42384627 | Msa0071020:intron | 45.0% | |
| ! | GACCTACGCTAACGATTTTG+AGG | - | chr1_2:42384613-42384632 | None:intergenic | 45.0% |
| TCTTAAAAACCACACCCCTC+CGG | + | chr1_2:42384709-42384728 | Msa0071020:intron | 45.0% | |
| TCTGAGTCTACTAGTCCAGA+CGG | - | chr1_2:42384813-42384832 | None:intergenic | 45.0% | |
| ATGATGTGGGACTAACATGG+GGG | - | chr1_2:42384968-42384987 | None:intergenic | 45.0% | |
| GCAATGATGTGGGACTAACA+TGG | - | chr1_2:42384971-42384990 | None:intergenic | 45.0% | |
| CTAGTATGGTGGCAATGATG+TGG | - | chr1_2:42384982-42385001 | None:intergenic | 45.0% | |
| ATTGCCACCATACTAGAGAC+TGG | + | chr1_2:42384986-42385005 | Msa0071020:intron | 45.0% | |
| CAAACCAGTCTCTAGTATGG+TGG | - | chr1_2:42384993-42385012 | None:intergenic | 45.0% | |
| AGGCAAACCAGTCTCTAGTA+TGG | - | chr1_2:42384996-42385015 | None:intergenic | 45.0% | |
| TTGGGTTTCAGGATTCCGAT+TGG | + | chr1_2:42385343-42385362 | Msa0071020:intron | 45.0% | |
| ATGCATCCAGGTGAACCAAT+CGG | - | chr1_2:42385361-42385380 | None:intergenic | 45.0% | |
| CAGATTGTTCCAACCATGAC+TGG | - | chr1_2:42385389-42385408 | None:intergenic | 45.0% | |
| TGGAACAATCTGACCATGAG+TGG | + | chr1_2:42385397-42385416 | Msa0071020:CDS | 45.0% | |
| GGACACCTTGACATTATGGA+AGG | - | chr1_2:42385534-42385553 | None:intergenic | 45.0% | |
| CATGGGACACCTTGACATTA+TGG | - | chr1_2:42385538-42385557 | None:intergenic | 45.0% | |
| AGAAGAAGAAGGGTGGTGAG+TGG | - | chr1_2:42381284-42381303 | None:intergenic | 50.0% | |
| GAATGGGAGAAGAAGAAGGG+TGG | - | chr1_2:42381291-42381310 | None:intergenic | 50.0% | |
| CGGTAGTGAAGTGGAAGGAA+TGG | - | chr1_2:42381308-42381327 | None:intergenic | 50.0% | |
| GTTCGTGTGTCAGTGCTTCA+TGG | - | chr1_2:42381965-42381984 | None:intergenic | 50.0% | |
| TGTCAACGTGTCAGTGTGTC+TGG | - | chr1_2:42381989-42382008 | None:intergenic | 50.0% | |
| GCGATATGAGGCTTCCCAAA+GGG | - | chr1_2:42382131-42382150 | None:intergenic | 50.0% | |
| CTCAGTTCCCACAGACATGA+TGG | - | chr1_2:42382245-42382264 | None:intergenic | 50.0% | |
| !! | GATGGTTCCCGATGATGGAT+GGG | + | chr1_2:42382282-42382301 | Msa0071020:CDS | 50.0% |
| GCAGGCAGAAACAGAACAAC+GGG | + | chr1_2:42382546-42382565 | Msa0071020:intron | 50.0% | |
| !! | TTACCACAAGGTGCTGGCAA+AGG | + | chr1_2:42382839-42382858 | Msa0071020:CDS | 50.0% |
| CCCAAGAGGAATTACTGCAG+TGG | + | chr1_2:42383125-42383144 | Msa0071020:CDS | 50.0% | |
| GCCACTGCAGTAATTCCTCT+TGG | - | chr1_2:42383129-42383148 | None:intergenic | 50.0% | |
| GGGTGGATATACACACCAGA+TGG | - | chr1_2:42384256-42384275 | None:intergenic | 50.0% | |
| GGTGTGTATATCCACCCTTC+TGG | + | chr1_2:42384259-42384278 | Msa0071020:CDS | 50.0% | |
| GAGAATGGTCAGCACCAGAA+GGG | - | chr1_2:42384276-42384295 | None:intergenic | 50.0% | |
| AGAGAATGGTCAGCACCAGA+AGG | - | chr1_2:42384277-42384296 | None:intergenic | 50.0% | |
| GCCAACTTGCAGATGAAGAG+CGG | + | chr1_2:42384506-42384525 | Msa0071020:intron | 50.0% | |
| ! | AGAACAGGCGTTTTTCCGTC+TGG | + | chr1_2:42384795-42384814 | Msa0071020:intron | 50.0% |
| !! | CTGGACTAGTAGACTCAGAC+AGG | + | chr1_2:42384814-42384833 | Msa0071020:intron | 50.0% |
| ! | AGGATTCCGATTGGTTCACC+TGG | + | chr1_2:42385352-42385371 | Msa0071020:intron | 50.0% |
| AAGAAGGGTGGTGAGTGGTG+AGG | - | chr1_2:42381279-42381298 | None:intergenic | 55.0% | |
| GGCGATATGAGGCTTCCCAA+AGG | - | chr1_2:42382132-42382151 | None:intergenic | 55.0% | |
| TGCTGGTGTTCTCAACTGGC+AGG | + | chr1_2:42382161-42382180 | Msa0071020:CDS | 55.0% | |
| !! | CGATGGTTCCCGATGATGGA+TGG | + | chr1_2:42382281-42382300 | Msa0071020:CDS | 55.0% |
| GCTAGCGAGTTCCTGAACCA+TGG | - | chr1_2:42382437-42382456 | None:intergenic | 55.0% | |
| TGACCTTTGCCAGCACCTTG+TGG | - | chr1_2:42382845-42382864 | None:intergenic | 55.0% | |
| GAGACTGAGGGAAAGCTACC+TGG | + | chr1_2:42382893-42382912 | Msa0071020:CDS | 55.0% | |
| GCCGAGCTATTCAGCATTCC+AGG | + | chr1_2:42382950-42382969 | Msa0071020:CDS | 55.0% | |
| GTAGGTAAGCAACGCCCAAG+AGG | + | chr1_2:42383111-42383130 | Msa0071020:intron | 55.0% | |
| AATGGTCAGCACCAGAAGGG+TGG | - | chr1_2:42384273-42384292 | None:intergenic | 55.0% | |
| GCCGCTCTTCATCTGCAAGT+TGG | - | chr1_2:42384510-42384529 | None:intergenic | 55.0% | |
| CTTGCAGATGAAGAGCGGCA+TGG | + | chr1_2:42384511-42384530 | Msa0071020:intron | 55.0% | |
| TTGGTAAATCCGGAGGGGTG+TGG | - | chr1_2:42384721-42384740 | None:intergenic | 55.0% | |
| TGACTGGTGCACATGCATCC+AGG | - | chr1_2:42385373-42385392 | None:intergenic | 55.0% | |
| GGATGCATGTGCACCAGTCA+TGG | + | chr1_2:42385373-42385392 | Msa0071020:CDS | 55.0% | |
| GCATGTGCACCAGTCATGGT+TGG | + | chr1_2:42385377-42385396 | Msa0071020:CDS | 55.0% | |
| !! | CCTCAGAGCGCTGTGCATCT+GGG | + | chr1_2:42383188-42383207 | Msa0071020:CDS | 60.0% |
| !! | GCCTCAGAGCGCTGTGCATC+TGG | + | chr1_2:42383187-42383206 | Msa0071020:CDS | 65.0% |
| CCCAGATGCACAGCGCTCTG+AGG | - | chr1_2:42383191-42383210 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 42381153 | 42385754 | 42381153 | ID=Msa0071020;Name=Msa0071020 |
| chr1_2 | mRNA | 42381153 | 42385754 | 42381153 | ID=Msa0071020-mRNA-1;Parent=Msa0071020;Name=Msa0071020-mRNA-1;_AED=0.10;_eAED=0.10;_QI=198|1|1|1|0.87|0.88|9|326|418 |
| chr1_2 | exon | 42381153 | 42381327 | 42381153 | ID=Msa0071020-mRNA-1:exon:12867;Parent=Msa0071020-mRNA-1 |
| chr1_2 | exon | 42381798 | 42381880 | 42381798 | ID=Msa0071020-mRNA-1:exon:12868;Parent=Msa0071020-mRNA-1 |
| chr1_2 | exon | 42382082 | 42382381 | 42382082 | ID=Msa0071020-mRNA-1:exon:12869;Parent=Msa0071020-mRNA-1 |
| chr1_2 | exon | 42382550 | 42382651 | 42382550 | ID=Msa0071020-mRNA-1:exon:12870;Parent=Msa0071020-mRNA-1 |
| chr1_2 | exon | 42382794 | 42382988 | 42382794 | ID=Msa0071020-mRNA-1:exon:12871;Parent=Msa0071020-mRNA-1 |
| chr1_2 | exon | 42383115 | 42383408 | 42383115 | ID=Msa0071020-mRNA-1:exon:12872;Parent=Msa0071020-mRNA-1 |
| chr1_2 | exon | 42384250 | 42384436 | 42384250 | ID=Msa0071020-mRNA-1:exon:12873;Parent=Msa0071020-mRNA-1 |
| chr1_2 | exon | 42384518 | 42384561 | 42384518 | ID=Msa0071020-mRNA-1:exon:12874;Parent=Msa0071020-mRNA-1 |
| chr1_2 | exon | 42385354 | 42385754 | 42385354 | ID=Msa0071020-mRNA-1:exon:12875;Parent=Msa0071020-mRNA-1 |
| chr1_2 | five_prime_UTR | 42381153 | 42381327 | 42381153 | ID=Msa0071020-mRNA-1:five_prime_utr;Parent=Msa0071020-mRNA-1 |
| chr1_2 | five_prime_UTR | 42381798 | 42381820 | 42381798 | ID=Msa0071020-mRNA-1:five_prime_utr;Parent=Msa0071020-mRNA-1 |
| chr1_2 | CDS | 42381821 | 42381880 | 42381821 | ID=Msa0071020-mRNA-1:cds;Parent=Msa0071020-mRNA-1 |
| chr1_2 | CDS | 42382082 | 42382381 | 42382082 | ID=Msa0071020-mRNA-1:cds;Parent=Msa0071020-mRNA-1 |
| chr1_2 | CDS | 42382550 | 42382651 | 42382550 | ID=Msa0071020-mRNA-1:cds;Parent=Msa0071020-mRNA-1 |
| chr1_2 | CDS | 42382794 | 42382988 | 42382794 | ID=Msa0071020-mRNA-1:cds;Parent=Msa0071020-mRNA-1 |
| chr1_2 | CDS | 42383115 | 42383408 | 42383115 | ID=Msa0071020-mRNA-1:cds;Parent=Msa0071020-mRNA-1 |
| chr1_2 | CDS | 42384250 | 42384436 | 42384250 | ID=Msa0071020-mRNA-1:cds;Parent=Msa0071020-mRNA-1 |
| chr1_2 | CDS | 42384518 | 42384561 | 42384518 | ID=Msa0071020-mRNA-1:cds;Parent=Msa0071020-mRNA-1 |
| chr1_2 | CDS | 42385354 | 42385428 | 42385354 | ID=Msa0071020-mRNA-1:cds;Parent=Msa0071020-mRNA-1 |
| chr1_2 | three_prime_UTR | 42385429 | 42385754 | 42385429 | ID=Msa0071020-mRNA-1:three_prime_utr;Parent=Msa0071020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
