AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0259390


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0259390 MtrunA17_Chr2g0315761 97.066 409 9 2 1 408 1 407 0.0 811
Msa0259390 MtrunA17_Chr3g0114521 53.388 369 170 2 30 396 21 389 4.25e-140 405
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0259390 AT3G14930.2 76.440 382 88 1 23 404 28 407 0.0 615
Msa0259390 AT3G14930.1 76.440 382 88 1 23 404 28 407 0.0 615
Msa0259390 AT3G14930.3 80.606 330 64 0 75 404 1 330 0.0 569
Msa0259390 AT2G40490.1 52.975 353 165 1 45 396 42 394 2.95e-137 398

Find 135 sgRNAs with CRISPR-Local

Find 478 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGAAGATATGGGTAATTT+TGG 0.116657 2_2:+56365903 Msa0259390:five_prime_UTR
CTGGTAGTTCAAGCCATTTC+TGG 0.205344 2_2:+56372193 Msa0259390:three_prime_UTR
GAACTTCCAGATTGTAGATT+TGG 0.248585 2_2:+56371012 Msa0259390:intron
ACGCTCTGAGGAGGGATTAA+AGG 0.251035 2_2:+56369180 Msa0259390:CDS
TAGTTTACCTCTTTGATATA+AGG 0.260796 2_2:-56369628 None:intergenic
GACACTGGAGTTGATGTAAT+TGG 0.268094 2_2:+56371109 Msa0259390:CDS
GTTCTATTATACAGTGGTTT+AGG 0.268295 2_2:+56366141 Msa0259390:intron
TACCCATATCTTCATCTTAG+TGG 0.293666 2_2:-56365896 None:intergenic
GTGCATGATAAATTAATTAG+AGG 0.300072 2_2:+56372344 Msa0259390:three_prime_UTR
AGAAAGAAGGTTGAAGCAAT+TGG 0.311062 2_2:-56366193 None:intergenic
GTGAGAGTGAGAGAGGGTTT+TGG 0.312464 2_2:-56366228 None:intergenic
ATTACTATCAGATCCTCTTT+TGG 0.323417 2_2:+56368877 Msa0259390:intron
GAACACCATGCCCAAGATTA+AGG 0.327102 2_2:-56372027 None:intergenic
GTATTGTTTCCATGAGTAAT+TGG 0.331153 2_2:-56366029 None:intergenic
ACCTCTGAATTTCTTCTGTT+AGG 0.334578 2_2:-56371237 None:intergenic
TTCGACAAGCTTAGATTTGT+AGG 0.338646 2_2:+56369220 Msa0259390:CDS
CCACTTGTTCTTTATATCAA+TGG 0.355349 2_2:+56371058 Msa0259390:CDS
GGCTATTGGTAGCAGTTTAG+AGG 0.358125 2_2:+56365931 Msa0259390:five_prime_UTR
AGCCATTTCTGGAAGAGTTC+AGG 0.359288 2_2:+56372204 Msa0259390:three_prime_UTR
AATCCACTAAGATGAAGATA+TGG 0.359396 2_2:+56365893 Msa0259390:five_prime_UTR
TAGAAATTTCTTTGCAGCCT+TGG 0.361660 2_2:+56369041 Msa0259390:CDS
TGTATGGCACATGCTCTTAA+TGG 0.364408 2_2:-56369452 None:intergenic
CTTGGGCATGGTGTTCTTGT+TGG 0.374900 2_2:+56372034 Msa0259390:CDS
ACTCGACTGGACAGTGGATA+TGG 0.377098 2_2:+56371132 Msa0259390:CDS
TAAAGAACAAGTGGTGTGTC+TGG 0.380680 2_2:-56371049 None:intergenic
GTTCTTTATATCAATGGAAA+TGG 0.383329 2_2:+56371064 Msa0259390:CDS
TTCAGGGTTGTGAGGTCTGC+AGG 0.389800 2_2:+56371989 Msa0259390:intron
CCTCTGAATTTCTTCTGTTA+GGG 0.395997 2_2:-56371236 None:intergenic
AGACAACACATCCTTAATCT+TGG 0.400361 2_2:+56372016 Msa0259390:CDS
AACCTGAACTCTTCCAGAAA+TGG 0.413215 2_2:-56372206 None:intergenic
CTTACACCTCTACCTGCGTT+CGG 0.413940 2_2:+56369106 Msa0259390:CDS
TTATTGTTTATTTAGGTTGG+TGG 0.415822 2_2:+56369343 Msa0259390:intron
CATGCCGGAGGACGACTAAC+AGG 0.416043 2_2:-56368920 None:intergenic
GAGAAAATAATTACTCCATC+AGG 0.416476 2_2:-56369076 None:intergenic
CCTGTTGTACTTACTTTGCC+TGG 0.417206 2_2:+56372174 Msa0259390:three_prime_UTR
CTAAGCTTGTCGAAGTCAAT+CGG 0.423001 2_2:-56369211 None:intergenic
CGTATCGGTGACTGTATAAC+AGG 0.424760 2_2:-56369160 None:intergenic
TTACACCTCTACCTGCGTTC+GGG 0.433960 2_2:+56369107 Msa0259390:CDS
TTAGTATGTGTGGTGTTGTA+TGG 0.439001 2_2:-56369468 None:intergenic
CAATACCTACTTCCATCAAC+AGG 0.440396 2_2:+56366046 Msa0259390:CDS
AGAGAAGGAAAACCTGTTGA+TGG 0.442318 2_2:-56366058 None:intergenic
AAATGCGCTACAGCTTCTTC+CGG 0.449749 2_2:-56372061 None:intergenic
CCAGGCAAAGTAAGTACAAC+AGG 0.456358 2_2:-56372174 None:intergenic
GTTTGAAAGGAGAAGAAAGA+AGG 0.460520 2_2:-56366206 None:intergenic
TCTTCTGTTAGGGCAGTAAG+AGG 0.462239 2_2:-56371226 None:intergenic
AGAAGATTAGGTAGTGGGAT+TGG 0.463579 2_2:+56371166 Msa0259390:CDS
GCTGATGGGAGAAGAAGATT+AGG 0.465293 2_2:+56371154 Msa0259390:CDS
GGGAGAAGAAGATTAGGTAG+TGG 0.465633 2_2:+56371160 Msa0259390:CDS
GACAACACATCCTTAATCTT+GGG 0.466437 2_2:+56372017 Msa0259390:CDS
TCTGCCGCCTCATCTTCTAA+TGG 0.467553 2_2:+56366270 Msa0259390:CDS
GACCAGAGTTCCCACATATG+AGG 0.470428 2_2:-56369601 None:intergenic
AAACTTGGTGAGAGTGAGAG+AGG 0.470788 2_2:-56366235 None:intergenic
CATACAAATATTTGACTCAT+GGG 0.474073 2_2:+56369564 Msa0259390:CDS
GGAGAAGAAGATTAGGTAGT+GGG 0.474638 2_2:+56371161 Msa0259390:CDS
TGTGGGAGCACCTTGGACAT+TGG 0.478006 2_2:+56369387 Msa0259390:CDS
CTCGCAGCCTTAACCAAAAG+AGG 0.480396 2_2:-56368890 None:intergenic
CTCATCACTCCAATTACTCA+TGG 0.481187 2_2:+56366020 Msa0259390:exon
GACATTGGCAACGTATATAG+TGG 0.481356 2_2:+56369402 Msa0259390:CDS
AGAGGAGAGAATAAAGAAGC+AGG 0.483840 2_2:-56371208 None:intergenic
ATACAACACCACACATACTA+AGG 0.484227 2_2:+56369470 Msa0259390:CDS
GGCAACGTATATAGTGGAAG+GGG 0.484531 2_2:+56369408 Msa0259390:CDS
GCATACAAATATTTGACTCA+TGG 0.496137 2_2:+56369563 Msa0259390:CDS
GACAACTGCCACCTCATATG+TGG 0.496273 2_2:+56369590 Msa0259390:CDS
CGCATTTCTTTGACGTCGCG+AGG 0.499359 2_2:+56372077 Msa0259390:CDS
CAGTCGTCTCTGACCTCTCT+CGG 0.502489 2_2:-56369009 None:intergenic
CGAACGCAGGTAGAGGTGTA+AGG 0.504596 2_2:-56369105 None:intergenic
CACCTCATATGTGGGAACTC+TGG 0.508382 2_2:+56369599 Msa0259390:CDS
TCTGACCTCTCTCGGAAGGA+TGG 0.513347 2_2:-56369001 None:intergenic
CAGAAATGGCTTGAACTACC+AGG 0.513418 2_2:-56372192 None:intergenic
GCATGGATGATGCGCCAAGC+AGG 0.516013 2_2:+56368938 Msa0259390:CDS
TATTATACAGTGGTTTAGGA+TGG 0.516663 2_2:+56366145 Msa0259390:intron
CTGTTAGTCGTCCTCCGGCA+TGG 0.518001 2_2:+56368921 Msa0259390:CDS
CTGTCACTTTCAGGGTTGTG+AGG 0.519796 2_2:+56371981 Msa0259390:intron
ATTATACTCAAACAAATGGA+AGG 0.527965 2_2:-56372370 None:intergenic
TCGATCCCGAACGCAGGTAG+AGG 0.533836 2_2:-56369112 None:intergenic
TCTGCTTTCTCATTTGTCAA+AGG 0.534509 2_2:+56369495 Msa0259390:CDS
TAAGCTTGTCGAAGTCAATC+GGG 0.538660 2_2:-56369210 None:intergenic
TAGCCATGTACCTTCCTGCT+TGG 0.546091 2_2:-56368952 None:intergenic
TTGACTTGTTCTGATGAAGT+TGG 0.547484 2_2:+56372424 Msa0259390:three_prime_UTR
AGATCCTGTTAGTCGTCCTC+CGG 0.548024 2_2:+56368916 Msa0259390:CDS
CGATTTGTACATTGCTATGT+CGG 0.548513 2_2:+56372278 Msa0259390:three_prime_UTR
AGATTAAGGATGTGTTGTCT+AGG 0.548882 2_2:-56372013 None:intergenic
ATCCACTAAGATGAAGATAT+GGG 0.549565 2_2:+56365894 Msa0259390:five_prime_UTR
AGAGCAAGTGAGAGTAAACT+TGG 0.554435 2_2:-56366250 None:intergenic
CTTTATATCAATGGAAATGG+TGG 0.557209 2_2:+56371067 Msa0259390:CDS
AACTTGGTGAGAGTGAGAGA+GGG 0.562584 2_2:-56366234 None:intergenic
GCTTGGCGCATCATCCATGC+CGG 0.565380 2_2:-56368935 None:intergenic
AAAGAACAAGTGGTGTGTCT+GGG 0.567198 2_2:-56371048 None:intergenic
CGTCTCTGACCTCTCTCGGA+AGG 0.569014 2_2:-56369005 None:intergenic
GAAAACCTGTTGATGGAAGT+AGG 0.570172 2_2:-56366051 None:intergenic
CTTTGACATAGAAGATGTGA+GGG 0.572515 2_2:+56369135 Msa0259390:CDS
GCGCCAAGCAGGAAGGTACA+TGG 0.572903 2_2:+56368949 Msa0259390:CDS
TTGATGTAATTGGACTCGAC+TGG 0.576021 2_2:+56371119 Msa0259390:CDS
AACATCCATCCTTCCGAGAG+AGG 0.577108 2_2:+56368996 Msa0259390:CDS
AATCCCTCCTCAGAGCGTAT+CGG 0.581435 2_2:-56369175 None:intergenic
GGTAGTGGGATTGGTGTGCA+AGG 0.583292 2_2:+56371175 Msa0259390:CDS
TTGGCAACGTATATAGTGGA+AGG 0.583350 2_2:+56369406 Msa0259390:CDS
AGCAGAGTCCTTAGTATGTG+TGG 0.585181 2_2:-56369478 None:intergenic
GCAATTGGATTGTTGAAACA+AGG 0.587778 2_2:-56366178 None:intergenic
CAAATATTTGACTCATGGGG+TGG 0.589836 2_2:+56369568 Msa0259390:CDS
ACTTAAGATCCTGCGGCAAG+AGG 0.593099 2_2:+56369249 Msa0259390:CDS
GAGGAGAGAATAAAGAAGCA+GGG 0.594985 2_2:-56371207 None:intergenic
GTCAAAACCTTATATCAAAG+AGG 0.596608 2_2:+56369621 Msa0259390:CDS
TCAAAGTCGATCCCGAACGC+AGG 0.597771 2_2:-56369118 None:intergenic
CACATCCTTAATCTTGGGCA+TGG 0.600175 2_2:+56372022 Msa0259390:CDS
ATATACGTTGCCAATGTCCA+AGG 0.600785 2_2:-56369397 None:intergenic
TGGTGTTCTTGTTGGCACAC+CGG 0.601899 2_2:+56372042 Msa0259390:CDS
TGGCAACGTATATAGTGGAA+GGG 0.603156 2_2:+56369407 Msa0259390:CDS
GGAAGTACCATTAGAAGATG+AGG 0.606317 2_2:-56366277 None:intergenic
TGGACAGTGGATATGGCTGA+TGG 0.608612 2_2:+56371139 Msa0259390:CDS
TCACCGATACGCTCTGAGGA+GGG 0.608994 2_2:+56369172 Msa0259390:CDS
ACAACTGCCACCTCATATGT+GGG 0.615316 2_2:+56369591 Msa0259390:CDS
GTCACCGATACGCTCTGAGG+AGG 0.616864 2_2:+56369171 Msa0259390:CDS
ACTTTGACATAGAAGATGTG+AGG 0.620333 2_2:+56369134 Msa0259390:CDS
CCATTGATATAAAGAACAAG+TGG 0.622098 2_2:-56371058 None:intergenic
TGTCTATCATACGCTCGAGA+AGG 0.625970 2_2:-56371090 None:intergenic
TGGCGCATCATCCATGCCGG+AGG 0.630576 2_2:-56368932 None:intergenic
TCAGGCCTAAAAGCTTTCCA+AGG 0.632316 2_2:-56369058 None:intergenic
CTCGAGCGTATGATAGACAC+TGG 0.632830 2_2:+56371094 Msa0259390:CDS
AGTGAGCCCCAGATTCCACT+TGG 0.635817 2_2:-56369540 None:intergenic
GGATGATGCGCCAAGCAGGA+AGG 0.641154 2_2:+56368942 Msa0259390:CDS
GCTATGTCGGCGAATAGATG+AGG 0.642769 2_2:+56372291 Msa0259390:three_prime_UTR
TCCCACAAAACCTAAAACAG+CGG 0.645378 2_2:-56369371 None:intergenic
GATTGGTGTGCAAGGAAACG+TGG 0.647936 2_2:+56371183 Msa0259390:CDS
CCCTAACAGAAGAAATTCAG+AGG 0.651466 2_2:+56371236 Msa0259390:CDS
CAGAGTTCCCACATATGAGG+TGG 0.652631 2_2:-56369598 None:intergenic
GGACAGTGGATATGGCTGAT+GGG 0.655922 2_2:+56371140 Msa0259390:CDS
ATACAAATATTTGACTCATG+GGG 0.664818 2_2:+56369565 Msa0259390:CDS
GAGAATCACTTAAGATCCTG+CGG 0.672224 2_2:+56369242 Msa0259390:CDS
GGCAAAGTAAGTACAACAGG+TGG 0.674865 2_2:-56372171 None:intergenic
AATTGGACTCGACTGGACAG+TGG 0.685653 2_2:+56371126 Msa0259390:CDS
AGTACCATTAGAAGATGAGG+CGG 0.689225 2_2:-56366274 None:intergenic
ACAGTCACCGATACGCTCTG+AGG 0.696424 2_2:+56369168 Msa0259390:CDS
GCAACGTATATAGTGGAAGG+GGG 0.725564 2_2:+56369409 Msa0259390:CDS
TTTGACATAGAAGATGTGAG+GGG 0.768540 2_2:+56369136 Msa0259390:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAATTAAATTTTAATTAA+GGG - chr2_2:56368246-56368265 None:intergenic 0.0%
!!! AATAAATTAAATTTTAATTA+AGG - chr2_2:56368247-56368266 None:intergenic 0.0%
!!! AATTAAAATTTAATTTATTT+TGG + chr2_2:56368248-56368267 Msa0259390:intron 0.0%
!! AACAAAAAATAATTTATTAG+TGG + chr2_2:56367145-56367164 Msa0259390:intron 10.0%
!!! TAATTTTTCTATTTAAATCA+AGG + chr2_2:56367876-56367895 Msa0259390:intron 10.0%
!!! AGTTTTAATTCAAAAATATT+AGG - chr2_2:56368438-56368457 None:intergenic 10.0%
!!! TATTTTTGAATTAAAACTAA+CGG + chr2_2:56368440-56368459 Msa0259390:intron 10.0%
!!! AATTAAAATTCGATTTATTT+TGG - chr2_2:56368503-56368522 None:intergenic 10.0%
!!! AATAAATCGAATTTTAATTA+AGG + chr2_2:56368504-56368523 Msa0259390:intron 10.0%
!!! ATAAATCGAATTTTAATTAA+GGG + chr2_2:56368505-56368524 Msa0259390:intron 10.0%
!! TTAATTTCAATATTATGAAT+TGG + chr2_2:56371764-56371783 Msa0259390:intron 10.0%
!! TAATTTCAATATTATGAATT+GGG + chr2_2:56371765-56371784 Msa0259390:intron 10.0%
!! AATTATTAGTTAATAGTGAT+GGG - chr2_2:56366543-56366562 None:intergenic 15.0%
!! AAATTATTAGTTAATAGTGA+TGG - chr2_2:56366544-56366563 None:intergenic 15.0%
!! ATCACTATTAACTAATAATT+TGG + chr2_2:56366543-56366562 Msa0259390:intron 15.0%
!! TCACTATTAACTAATAATTT+GGG + chr2_2:56366544-56366563 Msa0259390:intron 15.0%
!! TCTTCTATATATTATGATAA+AGG + chr2_2:56367629-56367648 Msa0259390:intron 15.0%
!! CTTCTATATATTATGATAAA+GGG + chr2_2:56367630-56367649 Msa0259390:intron 15.0%
!!! TTTACATTGTTTTAAAACAA+AGG + chr2_2:56367799-56367818 Msa0259390:intron 15.0%
!!! CAAATGATTAACTTAATTTT+TGG + chr2_2:56367863-56367882 Msa0259390:intron 15.0%
!! CCTAAATAGTTAAAAAAAAA+GGG - chr2_2:56368208-56368227 None:intergenic 15.0%
!! ACCTAAATAGTTAAAAAAAA+AGG - chr2_2:56368209-56368228 None:intergenic 15.0%
!! AAATAGAAAACAAAAGAAAT+TGG + chr2_2:56370293-56370312 Msa0259390:intron 15.0%
!! AATAGAAAACAAAAGAAATT+GGG + chr2_2:56370294-56370313 Msa0259390:intron 15.0%
!!! ATAATACATTTTGGAAATTT+GGG + chr2_2:56370477-56370496 Msa0259390:intron 15.0%
!! AATTAATTAAACCATTACAT+TGG - chr2_2:56370728-56370747 None:intergenic 15.0%
!!! TGTAATGGTTTAATTAATTT+TGG + chr2_2:56370729-56370748 Msa0259390:intron 15.0%
!! TATAATAAATAGCAAATTCT+AGG + chr2_2:56370934-56370953 Msa0259390:intron 15.0%
!!! TTTTATTATACTCAAACAAA+TGG - chr2_2:56372377-56372396 None:intergenic 15.0%
!! AAAAAAAAAAACTGAGAGAA+TGG - chr2_2:56366301-56366320 None:intergenic 20.0%
!! TAAAAAATGTTATCATGACA+TGG - chr2_2:56366402-56366421 None:intergenic 20.0%
!! ATTATTAGTTAATAGTGATG+GGG - chr2_2:56366542-56366561 None:intergenic 20.0%
!! CACTATTAACTAATAATTTG+GGG + chr2_2:56366545-56366564 Msa0259390:intron 20.0%
!!! ATTTATTAGTGGCAATTTTT+TGG + chr2_2:56367156-56367175 Msa0259390:intron 20.0%
!!! TTTATTAGTGGCAATTTTTT+GGG + chr2_2:56367157-56367176 Msa0259390:intron 20.0%
!! TTGAAAAGATTTAGATATTG+TGG + chr2_2:56367266-56367285 Msa0259390:intron 20.0%
!! TTCAAAAAAGGTTCAATAAT+TGG - chr2_2:56367340-56367359 None:intergenic 20.0%
!!! AATTATTGAACCTTTTTTGA+AGG + chr2_2:56367339-56367358 Msa0259390:intron 20.0%
!!! ACTTTTTTAGGTTATAATGA+AGG + chr2_2:56367371-56367390 Msa0259390:intron 20.0%
!!! CCCTTTTTTTTTAACTATTT+AGG + chr2_2:56368205-56368224 Msa0259390:intron 20.0%
!!! CGTTTTTGAATTAAAACTAA+CGG - chr2_2:56368311-56368330 None:intergenic 20.0%
!!! AGTTTTAATTCAAAAACGTT+AGG + chr2_2:56368313-56368332 Msa0259390:intron 20.0%
!!! ATTTTCTTATGGAATTTTTC+TGG + chr2_2:56368344-56368363 Msa0259390:intron 20.0%
!! ATGATATGAATATGAAAAAG+AGG + chr2_2:56368394-56368413 Msa0259390:intron 20.0%
!! AAATAAACAATAAGTAGTGA+GGG - chr2_2:56369336-56369355 None:intergenic 20.0%
!! TAAATAAACAATAAGTAGTG+AGG - chr2_2:56369337-56369356 None:intergenic 20.0%
!! TCACTACTTATTGTTTATTT+AGG + chr2_2:56369336-56369355 Msa0259390:intron 20.0%
!! TACTTATTGTTTATTTAGGT+TGG + chr2_2:56369340-56369359 Msa0259390:intron 20.0%
!!! AACCTAAAACAATTTTATCA+GGG - chr2_2:56369678-56369697 None:intergenic 20.0%
!!! AAACCTAAAACAATTTTATC+AGG - chr2_2:56369679-56369698 None:intergenic 20.0%
!! CAAATTCACACATATTATAT+TGG - chr2_2:56370382-56370401 None:intergenic 20.0%
!!! TCAACAATGATAATACATTT+TGG + chr2_2:56370468-56370487 Msa0259390:intron 20.0%
!!! GATAATACATTTTGGAAATT+TGG + chr2_2:56370476-56370495 Msa0259390:intron 20.0%
!! ACTAAATTAAAAGGATGATA+CGG - chr2_2:56370553-56370572 None:intergenic 20.0%
!! TTACCATGTACTAAATTAAA+AGG - chr2_2:56370562-56370581 None:intergenic 20.0%
!! ACAATAATCGAGTTTAATAA+CGG + chr2_2:56370653-56370672 Msa0259390:intron 20.0%
!!! TGGTTTAATTAATTTTGGTT+CGG + chr2_2:56370734-56370753 Msa0259390:intron 20.0%
!! ATGAGTTAACATAATAGTTA+GGG - chr2_2:56370786-56370805 None:intergenic 20.0%
!! AAATGAGAAAACGAATAAAT+TGG - chr2_2:56370975-56370994 None:intergenic 20.0%
!! TACAAATTGTGTTTAAATAG+TGG - chr2_2:56371425-56371444 None:intergenic 20.0%
!! ATGAAGATATGGGTAATTTT+GGG + chr2_2:56365904-56365923 Msa0259390:five_prime_UTR 25.0%
! AGTGATGAGAGAAATTTATT+TGG - chr2_2:56366009-56366028 None:intergenic 25.0%
!! GAATTTGTTCTATTATACAG+TGG + chr2_2:56366135-56366154 Msa0259390:intron 25.0%
! AAAAGCTCTTATACATGATT+AGG - chr2_2:56366512-56366531 None:intergenic 25.0%
!!! CATATATTTTGGGATATAAG+TGG + chr2_2:56366662-56366681 Msa0259390:intron 25.0%
! TGATACTACATATGTAAATC+TGG - chr2_2:56366767-56366786 None:intergenic 25.0%
!!! GTTTTAAATTTCGATTGAGT+CGG - chr2_2:56367029-56367048 None:intergenic 25.0%
!!! TGGTTTTAGTTGTTGAAATT+TGG + chr2_2:56367122-56367141 Msa0259390:intron 25.0%
!!! TTATTAGTGGCAATTTTTTG+GGG + chr2_2:56367158-56367177 Msa0259390:intron 25.0%
!!! TGGTTATTTTGCTATGTTAT+TGG + chr2_2:56367197-56367216 Msa0259390:intron 25.0%
! TATGTTATTGGATAACTATG+TGG + chr2_2:56367209-56367228 Msa0259390:intron 25.0%
! TGATAATCAACCTTCAAAAA+AGG - chr2_2:56367352-56367371 None:intergenic 25.0%
!!! AGGTTGATTATCACTTTTTT+AGG + chr2_2:56367359-56367378 Msa0259390:intron 25.0%
! AGATCCAATAAATATGAGTA+AGG + chr2_2:56367600-56367619 Msa0259390:intron 25.0%
! GATCCAATAAATATGAGTAA+GGG + chr2_2:56367601-56367620 Msa0259390:intron 25.0%
! ATCCAATAAATATGAGTAAG+GGG + chr2_2:56367602-56367621 Msa0259390:intron 25.0%
! AAAAAGTGACAAAAAGATGA+GGG - chr2_2:56367664-56367683 None:intergenic 25.0%
! TAAAAAGTGACAAAAAGATG+AGG - chr2_2:56367665-56367684 None:intergenic 25.0%
!!! TGTCACTTTTTACTCTTTAA+TGG + chr2_2:56367673-56367692 Msa0259390:intron 25.0%
! GTAAATGTGTAACAGATTTA+TGG + chr2_2:56367743-56367762 Msa0259390:intron 25.0%
!!! TTTTGGCTAAATTGCATTTT+TGG + chr2_2:56367996-56368015 Msa0259390:intron 25.0%
! AAGGTTACCTAAATAGTTAA+GGG - chr2_2:56368023-56368042 None:intergenic 25.0%
!! AGGTTTTCTTCATTTTCTTA+TGG + chr2_2:56368333-56368352 Msa0259390:intron 25.0%
! TTGAATTAAAACTAACGGAA+AGG + chr2_2:56368445-56368464 Msa0259390:intron 25.0%
! GATACTACCTAAATAGTTAA+GGG + chr2_2:56368536-56368555 Msa0259390:intron 25.0%
!! TTAAGGCTAAATTGCATTTT+TGG - chr2_2:56368563-56368582 None:intergenic 25.0%
!! CCTTAATTTTTCTACAAACT+CGG + chr2_2:56368577-56368596 Msa0259390:intron 25.0%
!! CAATTTAAAACCATGATCTT+AGG - chr2_2:56368654-56368673 None:intergenic 25.0%
!!! AAGATCATGGTTTTAAATTG+CGG + chr2_2:56368654-56368673 Msa0259390:intron 25.0%
! AAAGATAGCCATGATATAAA+AGG - chr2_2:56369301-56369320 None:intergenic 25.0%
!!! TTATTGTTTATTTAGGTTGG+TGG + chr2_2:56369343-56369362 Msa0259390:intron 25.0%
! CATACAAATATTTGACTCAT+GGG + chr2_2:56369564-56369583 Msa0259390:CDS 25.0%
! ATACAAATATTTGACTCATG+GGG + chr2_2:56369565-56369584 Msa0259390:CDS 25.0%
! TAGTTTACCTCTTTGATATA+AGG - chr2_2:56369631-56369650 None:intergenic 25.0%
! TATATCAAAGAGGTAAACTA+AGG + chr2_2:56369631-56369650 Msa0259390:intron 25.0%
! ATATCAAAGAGGTAAACTAA+GGG + chr2_2:56369632-56369651 Msa0259390:intron 25.0%
!! TTCCCTGATAAAATTGTTTT+AGG + chr2_2:56369673-56369692 Msa0259390:intron 25.0%
!! AATTTCTTTTGTCGAAGAAA+GGG + chr2_2:56369728-56369747 Msa0259390:intron 25.0%
! ACTCAGAAAATATTACTGTA+TGG - chr2_2:56370411-56370430 None:intergenic 25.0%
!! TACAGTAATATTTTCTGAGT+TGG + chr2_2:56370411-56370430 Msa0259390:intron 25.0%
!!! CATCCTTTTAATTTAGTACA+TGG + chr2_2:56370556-56370575 Msa0259390:intron 25.0%
! TTTAGTACATGGTAACTTAT+AGG + chr2_2:56370567-56370586 Msa0259390:intron 25.0%
!!! GTGAACTGTCTTTAAAATAA+CGG + chr2_2:56370689-56370708 Msa0259390:intron 25.0%
!!! TAATTAATTTTGGTTCGGTT+CGG + chr2_2:56370739-56370758 Msa0259390:intron 25.0%
! TGAGTTAACATAATAGTTAG+GGG - chr2_2:56370785-56370804 None:intergenic 25.0%
! CATGAGTTAACATAATAGTT+AGG - chr2_2:56370787-56370806 None:intergenic 25.0%
! GTTCTTTATATCAATGGAAA+TGG + chr2_2:56371064-56371083 Msa0259390:CDS 25.0%
! GACACAAATGATAAAGTTAA+TGG - chr2_2:56371277-56371296 None:intergenic 25.0%
! TTATTGCCATATATGTTCTA+GGG + chr2_2:56371309-56371328 Msa0259390:intron 25.0%
! ATAGTGATAGATGTTTCTTA+AGG + chr2_2:56371717-56371736 Msa0259390:intron 25.0%
! GTGCATGATAAATTAATTAG+AGG + chr2_2:56372344-56372363 Msa0259390:three_prime_UTR 25.0%
! ATTATACTCAAACAAATGGA+AGG - chr2_2:56372373-56372392 None:intergenic 25.0%
AATCCACTAAGATGAAGATA+TGG + chr2_2:56365893-56365912 Msa0259390:five_prime_UTR 30.0%
ATCCACTAAGATGAAGATAT+GGG + chr2_2:56365894-56365913 Msa0259390:five_prime_UTR 30.0%
! GATGAAGATATGGGTAATTT+TGG + chr2_2:56365903-56365922 Msa0259390:five_prime_UTR 30.0%
!! ATATGGGTAATTTTGGGTAA+TGG + chr2_2:56365910-56365929 Msa0259390:five_prime_UTR 30.0%
!! TAATTTTGGGTAATGGCTAT+TGG + chr2_2:56365917-56365936 Msa0259390:five_prime_UTR 30.0%
GAAAAGAAGAAGAAGAAGTA+AGG + chr2_2:56365953-56365972 Msa0259390:five_prime_UTR 30.0%
GTATTGTTTCCATGAGTAAT+TGG - chr2_2:56366032-56366051 None:intergenic 30.0%
GTTCTATTATACAGTGGTTT+AGG + chr2_2:56366141-56366160 Msa0259390:intron 30.0%
TATTATACAGTGGTTTAGGA+TGG + chr2_2:56366145-56366164 Msa0259390:intron 30.0%
TAATTGTTCCCAATTTGACT+TGG + chr2_2:56366337-56366356 Msa0259390:intron 30.0%
! AATTGTTCCCAATTTGACTT+GGG + chr2_2:56366338-56366357 Msa0259390:intron 30.0%
AAATAAGCCCAAGTCAAATT+GGG - chr2_2:56366348-56366367 None:intergenic 30.0%
AAAATAAGCCCAAGTCAAAT+TGG - chr2_2:56366349-56366368 None:intergenic 30.0%
! ATTTGGGGAGAATTTTCATA+TGG + chr2_2:56366560-56366579 Msa0259390:intron 30.0%
! TTTGGGGAGAATTTTCATAT+GGG + chr2_2:56366561-56366580 Msa0259390:intron 30.0%
!!! ATATTTTGGGATATAAGTGG+AGG + chr2_2:56366665-56366684 Msa0259390:intron 30.0%
TCTGACAGACAAATAAATGA+TGG - chr2_2:56366692-56366711 None:intergenic 30.0%
! CAGAAGTGTATATAGTGATT+TGG + chr2_2:56366708-56366727 Msa0259390:intron 30.0%
ACAAAAATTATACTCTGACC+TGG + chr2_2:56366788-56366807 Msa0259390:intron 30.0%
CAAAAATTATACTCTGACCT+GGG + chr2_2:56366789-56366808 Msa0259390:intron 30.0%
ATAATGATCTATAACATCCC+AGG - chr2_2:56366809-56366828 None:intergenic 30.0%
! TTAAGAACTTTCTAAGAGCA+TGG + chr2_2:56366938-56366957 Msa0259390:intron 30.0%
!!! AAGAGCATGGTTTTAAATTG+CGG + chr2_2:56366951-56366970 Msa0259390:intron 30.0%
CTTCATACTATGGCAAAATA+CGG + chr2_2:56366993-56367012 Msa0259390:intron 30.0%
TTCATACTATGGCAAAATAC+GGG + chr2_2:56366994-56367013 Msa0259390:intron 30.0%
TTTGAAGATTGAAGATTCAG+AGG + chr2_2:56367068-56367087 Msa0259390:intron 30.0%
ACTATGTGGTAAGAATCAAA+AGG + chr2_2:56367223-56367242 Msa0259390:intron 30.0%
CTATGTGGTAAGAATCAAAA+GGG + chr2_2:56367224-56367243 Msa0259390:intron 30.0%
TATGTGGTAAGAATCAAAAG+GGG + chr2_2:56367225-56367244 Msa0259390:intron 30.0%
TAGATATTGTGGAATACTTG+AGG + chr2_2:56367277-56367296 Msa0259390:intron 30.0%
TGTTAAGAGATGAATGAAAC+AGG - chr2_2:56367497-56367516 None:intergenic 30.0%
TCTGAGAATGATATCTTTCA+AGG + chr2_2:56367530-56367549 Msa0259390:intron 30.0%
AACCCCTTACTCATATTTAT+TGG - chr2_2:56367607-56367626 None:intergenic 30.0%
!!! CAGAAAAGTTGTAGTTTTGA+AGG + chr2_2:56367699-56367718 Msa0259390:intron 30.0%
GTGAGAAGGTGATTAAATTA+AGG - chr2_2:56367833-56367852 None:intergenic 30.0%
GTTAATCATTTGTGACACAA+AGG - chr2_2:56367855-56367874 None:intergenic 30.0%
TTAAGCCAAAAACTGCAAAT+TGG - chr2_2:56367919-56367938 None:intergenic 30.0%
GTGAGAAGCTGATTAAATTA+TGG - chr2_2:56367949-56367968 None:intergenic 30.0%
GTTAATCATTTGTGACACAA+AGG - chr2_2:56367855-56367874 None:intergenic 30.0%
! TTTTGGTCCCTTAACTATTT+AGG + chr2_2:56368013-56368032 Msa0259390:intron 30.0%
CAAGGTTACCTAAATAGTTA+AGG - chr2_2:56368024-56368043 None:intergenic 30.0%
CTTAACTATTTAGGTAACCT+TGG + chr2_2:56368022-56368041 Msa0259390:intron 30.0%
!!! TTACCTTGTTTTTACACAAG+AGG - chr2_2:56368109-56368128 None:intergenic 30.0%
TCTTGTGTAAAAACAAGGTA+AGG + chr2_2:56368108-56368127 Msa0259390:intron 30.0%
GAAAGGACTAAAATGTGTAA+CGG + chr2_2:56368462-56368481 Msa0259390:intron 30.0%
CGATACTACCTAAATAGTTA+AGG + chr2_2:56368535-56368554 Msa0259390:intron 30.0%
! TTTTGGTCCCTTAACTATTT+AGG - chr2_2:56368013-56368032 None:intergenic 30.0%
CCGAGTTTGTAGAAAAATTA+AGG - chr2_2:56368580-56368599 None:intergenic 30.0%
AGAAATGGAAGGATAATGAA+GGG - chr2_2:56368774-56368793 None:intergenic 30.0%
! ATTACTATCAGATCCTCTTT+TGG + chr2_2:56368877-56368896 Msa0259390:intron 30.0%
GAGAAAATAATTACTCCATC+AGG - chr2_2:56369079-56369098 None:intergenic 30.0%
! TGTTGTCACCTTTTATATCA+TGG + chr2_2:56369290-56369309 Msa0259390:intron 30.0%
GCATACAAATATTTGACTCA+TGG + chr2_2:56369563-56369582 Msa0259390:CDS 30.0%
GTCAAAACCTTATATCAAAG+AGG + chr2_2:56369621-56369640 Msa0259390:CDS 30.0%
TTATCAGGGAAGAAAGAAAA+GGG - chr2_2:56369664-56369683 None:intergenic 30.0%
TTTATCAGGGAAGAAAGAAA+AGG - chr2_2:56369665-56369684 None:intergenic 30.0%
CTTTCTTCGACAAAAGAAAT+TGG - chr2_2:56369729-56369748 None:intergenic 30.0%
! CAATTTCTTTTGTCGAAGAA+AGG + chr2_2:56369727-56369746 Msa0259390:intron 30.0%
!!! TTGCAATTTTTTGCAGCAAA+TGG + chr2_2:56369888-56369907 Msa0259390:intron 30.0%
GGTTAACTAAACCATAACTT+TGG - chr2_2:56370051-56370070 None:intergenic 30.0%
TTGAAGAAATCTTCCATTTC+AGG + chr2_2:56370239-56370258 Msa0259390:intron 30.0%
!!! TATTCGTTTTTAGCCTGAAA+TGG - chr2_2:56370255-56370274 None:intergenic 30.0%
AAGAAAGAGCAATCAGTATT+TGG - chr2_2:56370324-56370343 None:intergenic 30.0%
AATCGAGTTTAATAACGGTT+CGG + chr2_2:56370658-56370677 Msa0259390:intron 30.0%
!! CTGTCTTTAAAATAACGGTT+CGG + chr2_2:56370694-56370713 Msa0259390:intron 30.0%
TTAACATAATAGTTAGGGGT+TGG - chr2_2:56370781-56370800 None:intergenic 30.0%
CCATTGATATAAAGAACAAG+TGG - chr2_2:56371061-56371080 None:intergenic 30.0%
CCACTTGTTCTTTATATCAA+TGG + chr2_2:56371058-56371077 Msa0259390:CDS 30.0%
CTTTATATCAATGGAAATGG+TGG + chr2_2:56371067-56371086 Msa0259390:CDS 30.0%
GTTATTGCCATATATGTTCT+AGG + chr2_2:56371308-56371327 Msa0259390:intron 30.0%
TATTGCCATATATGTTCTAG+GGG + chr2_2:56371310-56371329 Msa0259390:intron 30.0%
AACATCAGATTCTCATTATG+TGG - chr2_2:56371551-56371570 None:intergenic 30.0%
! ATACAAAACTATGGCTTTTC+TGG - chr2_2:56371819-56371838 None:intergenic 30.0%
TACCCATATCTTCATCTTAG+TGG - chr2_2:56365899-56365918 None:intergenic 35.0%
GCAATTGGATTGTTGAAACA+AGG - chr2_2:56366181-56366200 None:intergenic 35.0%
AGAAAGAAGGTTGAAGCAAT+TGG - chr2_2:56366196-56366215 None:intergenic 35.0%
GTTTGAAAGGAGAAGAAAGA+AGG - chr2_2:56366209-56366228 None:intergenic 35.0%
TTGCAATGAGACATAACAGT+AGG + chr2_2:56366451-56366470 Msa0259390:intron 35.0%
TGCAATGAGACATAACAGTA+GGG + chr2_2:56366452-56366471 Msa0259390:intron 35.0%
CTACAATTGTAATCCAAGAG+TGG - chr2_2:56366478-56366497 None:intergenic 35.0%
CACTCTTGGATTACAATTGT+AGG + chr2_2:56366476-56366495 Msa0259390:intron 35.0%
! AGAATTTTCATATGGGCCAT+GGG + chr2_2:56366568-56366587 Msa0259390:intron 35.0%
GTTTGAAAATCTCTAGGCAA+AGG - chr2_2:56366615-56366634 None:intergenic 35.0%
TCCTACGTTTGAAAATCTCT+AGG - chr2_2:56366621-56366640 None:intergenic 35.0%
! ATTTTCAAACGTAGGAGATG+TGG + chr2_2:56366625-56366644 Msa0259390:intron 35.0%
! ATGTGCAGCTGCATATATTT+TGG + chr2_2:56366651-56366670 Msa0259390:intron 35.0%
! TGTGCAGCTGCATATATTTT+GGG + chr2_2:56366652-56366671 Msa0259390:intron 35.0%
TATTGCGAACCTTCATACTA+TGG + chr2_2:56366983-56367002 Msa0259390:intron 35.0%
! CGTATTTTGCCATAGTATGA+AGG - chr2_2:56366995-56367014 None:intergenic 35.0%
! AAAACCATGCTTGTTGCTTA+AGG + chr2_2:56367044-56367063 Msa0259390:intron 35.0%
AAAACCTTAAGCAACAAGCA+TGG - chr2_2:56367051-56367070 None:intergenic 35.0%
TTTGTAGGAAGTGATTGAGT+TGG + chr2_2:56367102-56367121 Msa0259390:intron 35.0%
!!! TGGCAATTTTTTGGGGAAAA+AGG + chr2_2:56367165-56367184 Msa0259390:intron 35.0%
!! TCAAAAGGGGTTATTTTGTG+TGG + chr2_2:56367238-56367257 Msa0259390:intron 35.0%
TATTGTGGAATACTTGAGGA+AGG + chr2_2:56367281-56367300 Msa0259390:intron 35.0%
ATAATGAAGGCTCCTTCTAA+TGG + chr2_2:56367384-56367403 Msa0259390:intron 35.0%
TTAGGCAAGTAACCATTAGA+AGG - chr2_2:56367399-56367418 None:intergenic 35.0%
AATGGTTACTTGCCTAATTC+TGG + chr2_2:56367402-56367421 Msa0259390:intron 35.0%
TTCATCTCTTAACACTGCTT+TGG + chr2_2:56367503-56367522 Msa0259390:intron 35.0%
GTTAAAAAAAAAGGGCAACC+CGG - chr2_2:56368200-56368219 None:intergenic 35.0%
TGACCAAAATGTGTAACAGA+GGG - chr2_2:56368285-56368304 None:intergenic 35.0%
ATGACCAAAATGTGTAACAG+AGG - chr2_2:56368286-56368305 None:intergenic 35.0%
!! TCTGGTATTCTTGTTGTTGA+AGG + chr2_2:56368362-56368381 Msa0259390:intron 35.0%
!! TTCTTGTTGTTGAAGGTTGA+TGG + chr2_2:56368369-56368388 Msa0259390:intron 35.0%
CTATTTAGGTAGTATCGCTT+TGG - chr2_2:56368219-56368238 None:intergenic 35.0%
GTTAAGAACACCTAAGATCA+TGG + chr2_2:56368641-56368660 Msa0259390:intron 35.0%
CAGAAATGGAAGGATAATGA+AGG - chr2_2:56368775-56368794 None:intergenic 35.0%
!! ATCAGATCCTCTTTTGGTTA+AGG + chr2_2:56368883-56368902 Msa0259390:intron 35.0%
TAGAAATTTCTTTGCAGCCT+TGG + chr2_2:56369041-56369060 Msa0259390:CDS 35.0%
ACTTTGACATAGAAGATGTG+AGG + chr2_2:56369134-56369153 Msa0259390:CDS 35.0%
CTTTGACATAGAAGATGTGA+GGG + chr2_2:56369135-56369154 Msa0259390:CDS 35.0%
TTTGACATAGAAGATGTGAG+GGG + chr2_2:56369136-56369155 Msa0259390:CDS 35.0%
TTCGACAAGCTTAGATTTGT+AGG + chr2_2:56369220-56369239 Msa0259390:CDS 35.0%
!! TTAGTATGTGTGGTGTTGTA+TGG - chr2_2:56369471-56369490 None:intergenic 35.0%
ATACAACACCACACATACTA+AGG + chr2_2:56369470-56369489 Msa0259390:CDS 35.0%
TCTGCTTTCTCATTTGTCAA+AGG + chr2_2:56369495-56369514 Msa0259390:CDS 35.0%
! AGATTACATCGTTTTCCAAG+TGG + chr2_2:56369525-56369544 Msa0259390:CDS 35.0%
TTTCTGAGCTCTGTATAGTT+AGG + chr2_2:56369764-56369783 Msa0259390:intron 35.0%
ACCATTTCAACAATTCGGTT+CGG - chr2_2:56369978-56369997 None:intergenic 35.0%
!! AAACCTTAAACGATTCGGTT+CGG - chr2_2:56370010-56370029 None:intergenic 35.0%
GTTCCAAACCTTAAACGATT+CGG - chr2_2:56370015-56370034 None:intergenic 35.0%
! ACCATAACTTTGGTTCAGTT+CGG - chr2_2:56370041-56370060 None:intergenic 35.0%
TCGGTTCATAGGTAAGAAAA+TGG - chr2_2:56370072-56370091 None:intergenic 35.0%
TGAACTTTGTTCATGTTGCT+TGG + chr2_2:56370210-56370229 Msa0259390:intron 35.0%
AATCAGTATGCAGTTTAGCT+AGG - chr2_2:56370447-56370466 None:intergenic 35.0%
GTTCAATCTCAATCCTGATA+TGG + chr2_2:56370589-56370608 Msa0259390:intron 35.0%
ACAAAGTGTGAAACCATATC+AGG - chr2_2:56370605-56370624 None:intergenic 35.0%
TCACACTTTGTAAGTTGTGA+CGG + chr2_2:56370614-56370633 Msa0259390:intron 35.0%
GAACTTCCAGATTGTAGATT+TGG + chr2_2:56371012-56371031 Msa0259390:intron 35.0%
TCTTGACCAAATCTACAATC+TGG - chr2_2:56371021-56371040 None:intergenic 35.0%
CCTCTGAATTTCTTCTGTTA+GGG - chr2_2:56371239-56371258 None:intergenic 35.0%
ACCTCTGAATTTCTTCTGTT+AGG - chr2_2:56371240-56371259 None:intergenic 35.0%
AACAGAAGAAATTCAGAGGT+TGG + chr2_2:56371240-56371259 Msa0259390:intron 35.0%
TCATTTGTGTCGTCATTCTA+TGG + chr2_2:56371286-56371305 Msa0259390:intron 35.0%
CTCATTATGTGGAATCATCA+AGG - chr2_2:56371540-56371559 None:intergenic 35.0%
AGTCAGCTAAGCAAATACTA+GGG - chr2_2:56371659-56371678 None:intergenic 35.0%
AACTGAAAATAGTGACACGA+AGG + chr2_2:56371683-56371702 Msa0259390:intron 35.0%
ACTGAAAATAGTGACACGAA+GGG + chr2_2:56371684-56371703 Msa0259390:intron 35.0%
!!! AGCCATAGTTTTGTATGACA+TGG + chr2_2:56371823-56371842 Msa0259390:intron 35.0%
CACCATGTCATACAAAACTA+TGG - chr2_2:56371828-56371847 None:intergenic 35.0%
TGACAATGAGTGTTCTCATT+TGG - chr2_2:56371893-56371912 None:intergenic 35.0%
CTCATTGTCACGAATAAGAT+TGG + chr2_2:56371903-56371922 Msa0259390:intron 35.0%
!! TATGATTACCTGTCACTTTC+AGG + chr2_2:56371972-56371991 Msa0259390:intron 35.0%
!! ATGATTACCTGTCACTTTCA+GGG + chr2_2:56371973-56371992 Msa0259390:intron 35.0%
AGATTAAGGATGTGTTGTCT+AGG - chr2_2:56372016-56372035 None:intergenic 35.0%
AGACAACACATCCTTAATCT+TGG + chr2_2:56372016-56372035 Msa0259390:CDS 35.0%
GACAACACATCCTTAATCTT+GGG + chr2_2:56372017-56372036 Msa0259390:CDS 35.0%
CGATTTGTACATTGCTATGT+CGG + chr2_2:56372278-56372297 Msa0259390:three_prime_UTR 35.0%
!! TTGACTTGTTCTGATGAAGT+TGG + chr2_2:56372424-56372443 Msa0259390:three_prime_UTR 35.0%
CTCATCACTCCAATTACTCA+TGG + chr2_2:56366020-56366039 Msa0259390:exon 40.0%
CAATACCTACTTCCATCAAC+AGG + chr2_2:56366046-56366065 Msa0259390:CDS 40.0%
! GAAAACCTGTTGATGGAAGT+AGG - chr2_2:56366054-56366073 None:intergenic 40.0%
AGAGAAGGAAAACCTGTTGA+TGG - chr2_2:56366061-56366080 None:intergenic 40.0%
!!! AGAGAGGGTTTTGGTTTGAA+AGG - chr2_2:56366222-56366241 None:intergenic 40.0%
AGAGCAAGTGAGAGTAAACT+TGG - chr2_2:56366253-56366272 None:intergenic 40.0%
AGTACCATTAGAAGATGAGG+CGG - chr2_2:56366277-56366296 None:intergenic 40.0%
!! GGAAGTACCATTAGAAGATG+AGG - chr2_2:56366280-56366299 None:intergenic 40.0%
! GAGAATTTTCATATGGGCCA+TGG + chr2_2:56366567-56366586 Msa0259390:intron 40.0%
! GCCTAGAGATTTTCAAACGT+AGG + chr2_2:56366617-56366636 Msa0259390:intron 40.0%
! CTGACGTGTTTTATGCATAG+TGG + chr2_2:56366843-56366862 Msa0259390:intron 40.0%
!!! ATGGTTTTAAATTGCGGTCG+CGG + chr2_2:56366957-56366976 Msa0259390:intron 40.0%
GAGGTGAAACTTGAGTTTGT+AGG + chr2_2:56367087-56367106 Msa0259390:intron 40.0%
! GGGGAAAAAGGTGAACTTTT+TGG + chr2_2:56367177-56367196 Msa0259390:intron 40.0%
GAATACTTGAGGAAGGAACA+AGG + chr2_2:56367288-56367307 Msa0259390:intron 40.0%
TACTTGCCTAATTCTGGTGA+AGG + chr2_2:56367408-56367427 Msa0259390:intron 40.0%
AACACACCTTCACCAGAATT+AGG - chr2_2:56367417-56367436 None:intergenic 40.0%
!! GGTGAAGGTGTGTTTTCTTA+AGG + chr2_2:56367423-56367442 Msa0259390:intron 40.0%
TTTGTGACACAAAGGTGAGA+AGG - chr2_2:56367847-56367866 None:intergenic 40.0%
! CGAGACCAATTTGCAGTTTT+TGG + chr2_2:56367911-56367930 Msa0259390:intron 40.0%
CAGCCTCTTGTGTAAAAACA+AGG + chr2_2:56368103-56368122 Msa0259390:intron 40.0%
CGTACAATACACCAAATGGT+GGG + chr2_2:56368134-56368153 Msa0259390:intron 40.0%
GTGTAACAGAGGGAAGTTAA+GGG - chr2_2:56368275-56368294 None:intergenic 40.0%
TGTGTAACAGAGGGAAGTTA+AGG - chr2_2:56368276-56368295 None:intergenic 40.0%
! CTTCCCTCTGTTACACATTT+TGG + chr2_2:56368279-56368298 Msa0259390:intron 40.0%
!!! ATGGTTTTAAATTGCGGTCG+CGG + chr2_2:56366957-56366976 Msa0259390:intron 40.0%
GCATATGAGACAGAAATGGA+AGG - chr2_2:56368785-56368804 None:intergenic 40.0%
GTCTGCATATGAGACAGAAA+TGG - chr2_2:56368789-56368808 None:intergenic 40.0%
TAAGCTTGTCGAAGTCAATC+GGG - chr2_2:56369213-56369232 None:intergenic 40.0%
CTAAGCTTGTCGAAGTCAAT+CGG - chr2_2:56369214-56369233 None:intergenic 40.0%
GAGAATCACTTAAGATCCTG+CGG + chr2_2:56369242-56369261 Msa0259390:CDS 40.0%
TCCCACAAAACCTAAAACAG+CGG - chr2_2:56369374-56369393 None:intergenic 40.0%
ATATACGTTGCCAATGTCCA+AGG - chr2_2:56369400-56369419 None:intergenic 40.0%
GACATTGGCAACGTATATAG+TGG + chr2_2:56369402-56369421 Msa0259390:CDS 40.0%
! TTGGCAACGTATATAGTGGA+AGG + chr2_2:56369406-56369425 Msa0259390:CDS 40.0%
! TGGCAACGTATATAGTGGAA+GGG + chr2_2:56369407-56369426 Msa0259390:CDS 40.0%
TGTATGGCACATGCTCTTAA+TGG - chr2_2:56369455-56369474 None:intergenic 40.0%
! ATCGTTTTCCAAGTGGAATC+TGG + chr2_2:56369532-56369551 Msa0259390:CDS 40.0%
! TCGTTTTCCAAGTGGAATCT+GGG + chr2_2:56369533-56369552 Msa0259390:CDS 40.0%
CAAATATTTGACTCATGGGG+TGG + chr2_2:56369568-56369587 Msa0259390:CDS 40.0%
CAAGAGGAATCATAGAGACT+TGG - chr2_2:56369820-56369839 None:intergenic 40.0%
CAAGTCTCTATGATTCCTCT+TGG + chr2_2:56369818-56369837 Msa0259390:intron 40.0%
TCTCTATGATTCCTCTTGGT+TGG + chr2_2:56369822-56369841 Msa0259390:intron 40.0%
TATGATTCCTCTTGGTTGGT+TGG + chr2_2:56369826-56369845 Msa0259390:intron 40.0%
GGCTTCGTAAATAATGTGAC+TGG + chr2_2:56369851-56369870 Msa0259390:intron 40.0%
TGTGTAAGCCTTGACTGTTT+AGG + chr2_2:56369924-56369943 Msa0259390:intron 40.0%
GTGTAAGCCTTGACTGTTTA+GGG + chr2_2:56369925-56369944 Msa0259390:intron 40.0%
TGTAAGCCTTGACTGTTTAG+GGG + chr2_2:56369926-56369945 Msa0259390:intron 40.0%
ACCGAACCGAATTGTTGAAA+TGG + chr2_2:56369974-56369993 Msa0259390:intron 40.0%
ACCGAATTGTTGAAATGGTC+CGG + chr2_2:56369979-56369998 Msa0259390:intron 40.0%
AAACCGAACCGAATCGTTTA+AGG + chr2_2:56370004-56370023 Msa0259390:intron 40.0%
! GAACCGAATCGTTTAAGGTT+TGG + chr2_2:56370009-56370028 Msa0259390:intron 40.0%
ACCGAACTGAACCAAAGTTA+TGG + chr2_2:56370037-56370056 Msa0259390:intron 40.0%
!! AAAGCAGTGTTGGTTCAGTT+CGG - chr2_2:56370096-56370115 None:intergenic 40.0%
CTTTGTAAGTTGTGACGGTT+CGG + chr2_2:56370619-56370638 Msa0259390:intron 40.0%
CGGTTCGATAACCAATGTAA+TGG + chr2_2:56370714-56370733 Msa0259390:intron 40.0%
!!! TTTTGGTTCGGTTCGGTTTT+TGG + chr2_2:56370746-56370765 Msa0259390:intron 40.0%
AAAGAACAAGTGGTGTGTCT+GGG - chr2_2:56371051-56371070 None:intergenic 40.0%
TAAAGAACAAGTGGTGTGTC+TGG - chr2_2:56371052-56371071 None:intergenic 40.0%
!! GACACTGGAGTTGATGTAAT+TGG + chr2_2:56371109-56371128 Msa0259390:CDS 40.0%
TTGATGTAATTGGACTCGAC+TGG + chr2_2:56371119-56371138 Msa0259390:CDS 40.0%
GGAGAAGAAGATTAGGTAGT+GGG + chr2_2:56371161-56371180 Msa0259390:CDS 40.0%
!! AGAAGATTAGGTAGTGGGAT+TGG + chr2_2:56371166-56371185 Msa0259390:CDS 40.0%
GAGGAGAGAATAAAGAAGCA+GGG - chr2_2:56371210-56371229 None:intergenic 40.0%
AGAGGAGAGAATAAAGAAGC+AGG - chr2_2:56371211-56371230 None:intergenic 40.0%
CCCTAACAGAAGAAATTCAG+AGG + chr2_2:56371236-56371255 Msa0259390:CDS 40.0%
AGTCTCCCCTAGAACATATA+TGG - chr2_2:56371318-56371337 None:intergenic 40.0%
ATAACAGCGCTATAGCATAG+TGG - chr2_2:56371395-56371414 None:intergenic 40.0%
CACTTGTCATATAGTGGCTA+TGG - chr2_2:56371512-56371531 None:intergenic 40.0%
GAGAGTCACTTGTCATATAG+TGG - chr2_2:56371518-56371537 None:intergenic 40.0%
GAATCTGATGTTTCATCACG+TGG + chr2_2:56371559-56371578 Msa0259390:intron 40.0%
GTGGTGATAAATGCATTACC+AGG + chr2_2:56371578-56371597 Msa0259390:intron 40.0%
CTGGATCATAAACATTCGCT+AGG - chr2_2:56371609-56371628 None:intergenic 40.0%
CCTACAGAAATCTTAGACAC+TGG - chr2_2:56371628-56371647 None:intergenic 40.0%
! CCAGTGTCTAAGATTTCTGT+AGG + chr2_2:56371625-56371644 Msa0259390:intron 40.0%
CAGTCAGCTAAGCAAATACT+AGG - chr2_2:56371660-56371679 None:intergenic 40.0%
TGGGTTTAATCAGTCAGACT+TGG + chr2_2:56371784-56371803 Msa0259390:intron 40.0%
GGGTTTAATCAGTCAGACTT+GGG + chr2_2:56371785-56371804 Msa0259390:intron 40.0%
!! AACTATGGCTTTTCTGGCAA+AGG - chr2_2:56371813-56371832 None:intergenic 40.0%
AACCTGAACTCTTCCAGAAA+TGG - chr2_2:56372209-56372228 None:intergenic 40.0%
! GGCTATTGGTAGCAGTTTAG+AGG + chr2_2:56365931-56365950 Msa0259390:five_prime_UTR 45.0%
! AACTTGGTGAGAGTGAGAGA+GGG - chr2_2:56366237-56366256 None:intergenic 45.0%
! AAACTTGGTGAGAGTGAGAG+AGG - chr2_2:56366238-56366257 None:intergenic 45.0%
AATCTCTAGGCAAAGGAGAC+AGG - chr2_2:56366608-56366627 None:intergenic 45.0%
GTTGTTGTCATGTGACCGAA+AGG + chr2_2:56368058-56368077 Msa0259390:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - chr2_2:56368098-56368117 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG + chr2_2:56368130-56368149 Msa0259390:intron 45.0%
GCGTACAATACACCAAATGG+TGG + chr2_2:56368133-56368152 Msa0259390:intron 45.0%
! TGCAGCCTTGGAAAGCTTTT+AGG + chr2_2:56369053-56369072 Msa0259390:CDS 45.0%
TCAGGCCTAAAAGCTTTCCA+AGG - chr2_2:56369061-56369080 None:intergenic 45.0%
! TGGAAAGCTTTTAGGCCTGA+TGG + chr2_2:56369061-56369080 Msa0259390:CDS 45.0%
! CGTATCGGTGACTGTATAAC+AGG - chr2_2:56369163-56369182 None:intergenic 45.0%
CTGCGGCAAGAGGTAAAATT+CGG + chr2_2:56369259-56369278 Msa0259390:intron 45.0%
!!! TGCCGCTGTTTTAGGTTTTG+TGG + chr2_2:56369369-56369388 Msa0259390:CDS 45.0%
!!! GCCGCTGTTTTAGGTTTTGT+GGG + chr2_2:56369370-56369389 Msa0259390:CDS 45.0%
! GGCAACGTATATAGTGGAAG+GGG + chr2_2:56369408-56369427 Msa0259390:CDS 45.0%
! GCAACGTATATAGTGGAAGG+GGG + chr2_2:56369409-56369428 Msa0259390:CDS 45.0%
AGCAGAGTCCTTAGTATGTG+TGG - chr2_2:56369481-56369500 None:intergenic 45.0%
! CGTTTTCCAAGTGGAATCTG+GGG + chr2_2:56369534-56369553 Msa0259390:CDS 45.0%
ACAACTGCCACCTCATATGT+GGG + chr2_2:56369591-56369610 Msa0259390:CDS 45.0%
! ATTCCTCTTGGTTGGTTGGT+TGG + chr2_2:56369830-56369849 Msa0259390:intron 45.0%
CCCGGACCATTTCAACAATT+CGG - chr2_2:56369983-56370002 None:intergenic 45.0%
CCGAATTGTTGAAATGGTCC+GGG + chr2_2:56369980-56369999 Msa0259390:intron 45.0%
!! TTCAGTTCGGTTCGGTTCAT+AGG - chr2_2:56370083-56370102 None:intergenic 45.0%
!! AGTGTTGGTTCAGTTCGGTT+CGG - chr2_2:56370091-56370110 None:intergenic 45.0%
!! AACCAACACTGCTTTTCTGC+AGG + chr2_2:56370101-56370120 Msa0259390:intron 45.0%
GAGCAGGATGGTCAGAAAAA+TGG - chr2_2:56370519-56370538 None:intergenic 45.0%
!! TAAGTTGTGACGGTTCGGTT+CGG + chr2_2:56370624-56370643 Msa0259390:intron 45.0%
TTAAGCGTGCTTGTGACTTC+AGG + chr2_2:56370812-56370831 Msa0259390:intron 45.0%
TAAGCGTGCTTGTGACTTCA+GGG + chr2_2:56370813-56370832 Msa0259390:intron 45.0%
TGTCTATCATACGCTCGAGA+AGG - chr2_2:56371093-56371112 None:intergenic 45.0%
GCTGATGGGAGAAGAAGATT+AGG + chr2_2:56371154-56371173 Msa0259390:CDS 45.0%
GGGAGAAGAAGATTAGGTAG+TGG + chr2_2:56371160-56371179 Msa0259390:CDS 45.0%
TCTTCTGTTAGGGCAGTAAG+AGG - chr2_2:56371229-56371248 None:intergenic 45.0%
TCGCAGGTCATGGAAAATAG+CGG + chr2_2:56371357-56371376 Msa0259390:intron 45.0%
CGTAGCGGTATACACTATAG+CGG - chr2_2:56371489-56371508 None:intergenic 45.0%
ATATAGTGGCTATGGCGTAG+CGG - chr2_2:56371504-56371523 None:intergenic 45.0%
AACATTCGCTAGGAAGATCC+TGG - chr2_2:56371599-56371618 None:intergenic 45.0%
CAGCTAAGCAAATACTAGGG+AGG - chr2_2:56371656-56371675 None:intergenic 45.0%
CACATCCTTAATCTTGGGCA+TGG + chr2_2:56372022-56372041 Msa0259390:CDS 45.0%
GAACACCATGCCCAAGATTA+AGG - chr2_2:56372030-56372049 None:intergenic 45.0%
AAATGCGCTACAGCTTCTTC+CGG - chr2_2:56372064-56372083 None:intergenic 45.0%
GGCAAAGTAAGTACAACAGG+TGG - chr2_2:56372174-56372193 None:intergenic 45.0%
CCAGGCAAAGTAAGTACAAC+AGG - chr2_2:56372177-56372196 None:intergenic 45.0%
CCTGTTGTACTTACTTTGCC+TGG + chr2_2:56372174-56372193 Msa0259390:three_prime_UTR 45.0%
CAGAAATGGCTTGAACTACC+AGG - chr2_2:56372195-56372214 None:intergenic 45.0%
CTGGTAGTTCAAGCCATTTC+TGG + chr2_2:56372193-56372212 Msa0259390:three_prime_UTR 45.0%
! AGCCATTTCTGGAAGAGTTC+AGG + chr2_2:56372204-56372223 Msa0259390:three_prime_UTR 45.0%
GAGAGAGAGAGAGAGAGAGA+AGG - chr2_2:56366076-56366095 None:intergenic 50.0%
! GTGAGAGTGAGAGAGGGTTT+TGG - chr2_2:56366231-56366250 None:intergenic 50.0%
TCTGCCGCCTCATCTTCTAA+TGG + chr2_2:56366270-56366289 Msa0259390:CDS 50.0%
CATAACAGTAGGGCCACTCT+TGG + chr2_2:56366462-56366481 Msa0259390:intron 50.0%
CATATGGGCCATGGGTAGAT+TGG + chr2_2:56366576-56366595 Msa0259390:intron 50.0%
GGAACATGCCAATCTACCCA+TGG - chr2_2:56366587-56366606 None:intergenic 50.0%
TTAGGTAACCTTGGCGCAAC+TGG + chr2_2:56368031-56368050 Msa0259390:intron 50.0%
CAACTTTACCAGTTGCGCCA+AGG - chr2_2:56368042-56368061 None:intergenic 50.0%
GTCATGTGACCGAAAGGTCA+CGG + chr2_2:56368064-56368083 Msa0259390:intron 50.0%
TCATGTGACCGAAAGGTCAC+GGG + chr2_2:56368065-56368084 Msa0259390:intron 50.0%
GACTTGAACCCGTGACCTTT+CGG - chr2_2:56368076-56368095 None:intergenic 50.0%
CTCTTGCCTGTATCTCAGCA+GGG - chr2_2:56368816-56368835 None:intergenic 50.0%
TCTCTTGCCTGTATCTCAGC+AGG - chr2_2:56368817-56368836 None:intergenic 50.0%
CTCGCAGCCTTAACCAAAAG+AGG - chr2_2:56368893-56368912 None:intergenic 50.0%
!! CTTTTGGTTAAGGCTGCGAG+AGG + chr2_2:56368893-56368912 Msa0259390:CDS 50.0%
AGATCCTGTTAGTCGTCCTC+CGG + chr2_2:56368916-56368935 Msa0259390:CDS 50.0%
TAGCCATGTACCTTCCTGCT+TGG - chr2_2:56368955-56368974 None:intergenic 50.0%
AACATCCATCCTTCCGAGAG+AGG + chr2_2:56368996-56369015 Msa0259390:CDS 50.0%
CTTACACCTCTACCTGCGTT+CGG + chr2_2:56369106-56369125 Msa0259390:CDS 50.0%
TTACACCTCTACCTGCGTTC+GGG + chr2_2:56369107-56369126 Msa0259390:CDS 50.0%
AATCCCTCCTCAGAGCGTAT+CGG - chr2_2:56369178-56369197 None:intergenic 50.0%
!! ACGCTCTGAGGAGGGATTAA+AGG + chr2_2:56369180-56369199 Msa0259390:CDS 50.0%
ACTTAAGATCCTGCGGCAAG+AGG + chr2_2:56369249-56369268 Msa0259390:CDS 50.0%
! CGAATTTTACCTCTTGCCGC+AGG - chr2_2:56369261-56369280 None:intergenic 50.0%
!!! TAGGTTTTGTGGGAGCACCT+TGG + chr2_2:56369380-56369399 Msa0259390:CDS 50.0%
GACAACTGCCACCTCATATG+TGG + chr2_2:56369590-56369609 Msa0259390:CDS 50.0%
CAGAGTTCCCACATATGAGG+TGG - chr2_2:56369601-56369620 None:intergenic 50.0%
CACCTCATATGTGGGAACTC+TGG + chr2_2:56369599-56369618 Msa0259390:CDS 50.0%
GACCAGAGTTCCCACATATG+AGG - chr2_2:56369604-56369623 None:intergenic 50.0%
AAGCCAACCAACCAACCAAG+AGG - chr2_2:56369836-56369855 None:intergenic 50.0%
AAGCCTTGACTGTTTAGGGG+TGG + chr2_2:56369929-56369948 Msa0259390:intron 50.0%
AGCCTTGACTGTTTAGGGGT+GGG + chr2_2:56369930-56369949 Msa0259390:intron 50.0%
!!! ACGATTCGGTTCGGTTTTCC+CGG - chr2_2:56370001-56370020 None:intergenic 50.0%
TGCCTGCAGAAAAGCAGTGT+TGG - chr2_2:56370106-56370125 None:intergenic 50.0%
GCATGTCAACTAGAGCAGGA+TGG - chr2_2:56370531-56370550 None:intergenic 50.0%
TACGGCATGTCAACTAGAGC+AGG - chr2_2:56370535-56370554 None:intergenic 50.0%
CTCGAGCGTATGATAGACAC+TGG + chr2_2:56371094-56371113 Msa0259390:CDS 50.0%
AATTGGACTCGACTGGACAG+TGG + chr2_2:56371126-56371145 Msa0259390:CDS 50.0%
ACTCGACTGGACAGTGGATA+TGG + chr2_2:56371132-56371151 Msa0259390:CDS 50.0%
TGGACAGTGGATATGGCTGA+TGG + chr2_2:56371139-56371158 Msa0259390:CDS 50.0%
GGACAGTGGATATGGCTGAT+GGG + chr2_2:56371140-56371159 Msa0259390:CDS 50.0%
GATTGGTGTGCAAGGAAACG+TGG + chr2_2:56371183-56371202 Msa0259390:CDS 50.0%
CCTGCGATTGACAACTCAAG+TGG - chr2_2:56371344-56371363 None:intergenic 50.0%
! CCACTTGAGTTGTCAATCGC+AGG + chr2_2:56371341-56371360 Msa0259390:intron 50.0%
GAGTTGTCAATCGCAGGTCA+TGG + chr2_2:56371347-56371366 Msa0259390:intron 50.0%
CTCACAACCCTGAAAGTGAC+AGG - chr2_2:56371983-56372002 None:intergenic 50.0%
!! CTGTCACTTTCAGGGTTGTG+AGG + chr2_2:56371981-56372000 Msa0259390:intron 50.0%
CTTGGGCATGGTGTTCTTGT+TGG + chr2_2:56372034-56372053 Msa0259390:CDS 50.0%
TGGTGTTCTTGTTGGCACAC+CGG + chr2_2:56372042-56372061 Msa0259390:CDS 50.0%
GCTATGTCGGCGAATAGATG+AGG + chr2_2:56372291-56372310 Msa0259390:three_prime_UTR 50.0%
AAGGTCACGGGTTCAAGTCC+TGG + chr2_2:56368077-56368096 Msa0259390:intron 55.0%
! CAAATGGTGGGACCCCTTTC+CGG + chr2_2:56368146-56368165 Msa0259390:intron 55.0%
CTAAAGCTCCCGCATACGCA+GGG - chr2_2:56368173-56368192 None:intergenic 55.0%
ACTAAAGCTCCCGCATACGC+AGG - chr2_2:56368174-56368193 None:intergenic 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG + chr2_2:56368178-56368197 Msa0259390:intron 55.0%
ACGTGACCCTGCTGAGATAC+AGG + chr2_2:56368807-56368826 Msa0259390:intron 55.0%
TCTGACCTCTCTCGGAAGGA+TGG - chr2_2:56369004-56369023 None:intergenic 55.0%
CAGTCGTCTCTGACCTCTCT+CGG - chr2_2:56369012-56369031 None:intergenic 55.0%
! CGAACGCAGGTAGAGGTGTA+AGG - chr2_2:56369108-56369127 None:intergenic 55.0%
TCAAAGTCGATCCCGAACGC+AGG - chr2_2:56369121-56369140 None:intergenic 55.0%
ACAGTCACCGATACGCTCTG+AGG + chr2_2:56369168-56369187 Msa0259390:CDS 55.0%
!! TCACCGATACGCTCTGAGGA+GGG + chr2_2:56369172-56369191 Msa0259390:CDS 55.0%
!! GGTGGTGATGCCGCTGTTTT+AGG + chr2_2:56369361-56369380 Msa0259390:CDS 55.0%
!! TGTGGGAGCACCTTGGACAT+TGG + chr2_2:56369387-56369406 Msa0259390:CDS 55.0%
AGTGAGCCCCAGATTCCACT+TGG - chr2_2:56369543-56369562 None:intergenic 55.0%
TGCCCACCCCTAAACAGTCA+AGG - chr2_2:56369935-56369954 None:intergenic 55.0%
TGACTGTTTAGGGGTGGGCA+TGG + chr2_2:56369935-56369954 Msa0259390:intron 55.0%
GTTTAGGGGTGGGCATGGTT+CGG + chr2_2:56369940-56369959 Msa0259390:intron 55.0%
!! GGTAGTGGGATTGGTGTGCA+AGG + chr2_2:56371175-56371194 Msa0259390:CDS 55.0%
TTCAGGGTTGTGAGGTCTGC+AGG + chr2_2:56371989-56372008 Msa0259390:intron 55.0%
CGCATTTCTTTGACGTCGCG+AGG + chr2_2:56372077-56372096 Msa0259390:CDS 55.0%
CGGAAAGGGGTCCCACCATT+TGG - chr2_2:56368148-56368167 None:intergenic 60.0%
CATACGCAGGGTCCGGAAAG+GGG - chr2_2:56368161-56368180 None:intergenic 60.0%
GCATACGCAGGGTCCGGAAA+GGG - chr2_2:56368162-56368181 None:intergenic 60.0%
CTTTCCGGACCCTGCGTATG+CGG + chr2_2:56368161-56368180 Msa0259390:intron 60.0%
TTTCCGGACCCTGCGTATGC+GGG + chr2_2:56368162-56368181 Msa0259390:intron 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG + chr2_2:56368179-56368198 Msa0259390:intron 60.0%
CATGCCGGAGGACGACTAAC+AGG - chr2_2:56368923-56368942 None:intergenic 60.0%
CTGTTAGTCGTCCTCCGGCA+TGG + chr2_2:56368921-56368940 Msa0259390:CDS 60.0%
GCTTGGCGCATCATCCATGC+CGG - chr2_2:56368938-56368957 None:intergenic 60.0%
GCATGGATGATGCGCCAAGC+AGG + chr2_2:56368938-56368957 Msa0259390:CDS 60.0%
GGATGATGCGCCAAGCAGGA+AGG + chr2_2:56368942-56368961 Msa0259390:CDS 60.0%
! GCGCCAAGCAGGAAGGTACA+TGG + chr2_2:56368949-56368968 Msa0259390:CDS 60.0%
CGTCTCTGACCTCTCTCGGA+AGG - chr2_2:56369008-56369027 None:intergenic 60.0%
TCGATCCCGAACGCAGGTAG+AGG - chr2_2:56369115-56369134 None:intergenic 60.0%
!! GTCACCGATACGCTCTGAGG+AGG + chr2_2:56369171-56369190 Msa0259390:CDS 60.0%
CGCATACGCAGGGTCCGGAA+AGG - chr2_2:56368163-56368182 None:intergenic 65.0%
TGGCGCATCATCCATGCCGG+AGG - chr2_2:56368935-56368954 None:intergenic 65.0%
GCTCCCGCATACGCAGGGTC+CGG - chr2_2:56368168-56368187 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 56365879 56372458 56365879 ID=Msa0259390;Name=Msa0259390
chr2_2 mRNA 56365879 56372458 56365879 ID=Msa0259390-mRNA-1;Parent=Msa0259390;Name=Msa0259390-mRNA-1;_AED=0.06;_eAED=0.06;_QI=138|1|1|1|0.83|0.71|7|308|408
chr2_2 exon 56365879 56365989 56365879 ID=Msa0259390-mRNA-1:exon:17007;Parent=Msa0259390-mRNA-1
chr2_2 exon 56366012 56366067 56366012 ID=Msa0259390-mRNA-1:exon:17008;Parent=Msa0259390-mRNA-1
chr2_2 exon 56366155 56366291 56366155 ID=Msa0259390-mRNA-1:exon:17009;Parent=Msa0259390-mRNA-1
chr2_2 exon 56368888 56369270 56368888 ID=Msa0259390-mRNA-1:exon:17010;Parent=Msa0259390-mRNA-1
chr2_2 exon 56369358 56369642 56369358 ID=Msa0259390-mRNA-1:exon:17011;Parent=Msa0259390-mRNA-1
chr2_2 exon 56371022 56371257 56371022 ID=Msa0259390-mRNA-1:exon:17012;Parent=Msa0259390-mRNA-1
chr2_2 exon 56371994 56372458 56371994 ID=Msa0259390-mRNA-1:exon:17013;Parent=Msa0259390-mRNA-1
chr2_2 five_prime_UTR 56365879 56365989 56365879 ID=Msa0259390-mRNA-1:five_prime_utr;Parent=Msa0259390-mRNA-1
chr2_2 five_prime_UTR 56366012 56366038 56366012 ID=Msa0259390-mRNA-1:five_prime_utr;Parent=Msa0259390-mRNA-1
chr2_2 CDS 56366039 56366067 56366039 ID=Msa0259390-mRNA-1:cds;Parent=Msa0259390-mRNA-1
chr2_2 CDS 56366155 56366291 56366155 ID=Msa0259390-mRNA-1:cds;Parent=Msa0259390-mRNA-1
chr2_2 CDS 56368888 56369270 56368888 ID=Msa0259390-mRNA-1:cds;Parent=Msa0259390-mRNA-1
chr2_2 CDS 56369358 56369642 56369358 ID=Msa0259390-mRNA-1:cds;Parent=Msa0259390-mRNA-1
chr2_2 CDS 56371022 56371257 56371022 ID=Msa0259390-mRNA-1:cds;Parent=Msa0259390-mRNA-1
chr2_2 CDS 56371994 56372150 56371994 ID=Msa0259390-mRNA-1:cds;Parent=Msa0259390-mRNA-1
chr2_2 three_prime_UTR 56372151 56372458 56372151 ID=Msa0259390-mRNA-1:three_prime_utr;Parent=Msa0259390-mRNA-1
Gene Sequence

>Msa0259390

ATGGAAACAATACCTACTTCCATCAACAGTGGTTTAGGATGGAAATCATCTTCCTTGTTTCAACAATCCAATTGCTTCAACCTTCTTTCTTCTCCTTTCAAACCAAAACCCTCTCTCACTCTCACCAAGTTTACTCTCACTTGCTCTGCCGCCTCATCTTCTAATGATCCTCTTTTGGTTAAGGCTGCGAGAGGAGATCCTGTTAGTCGTCCTCCGGCATGGATGATGCGCCAAGCAGGAAGGTACATGGCTATTTACAGAAAGTTAGCTGAGAAACATCCATCCTTCCGAGAGAGGTCAGAGACGACTGATCTCATTGTAGAAATTTCTTTGCAGCCTTGGAAAGCTTTTAGGCCTGATGGAGTAATTATTTTCTCTGACATCCTTACACCTCTACCTGCGTTCGGGATCGACTTTGACATAGAAGATGTGAGGGGACCTGTTATACAGTCACCGATACGCTCTGAGGAGGGATTAAAGGTTTTACACCCGATTGACTTCGACAAGCTTAGATTTGTAGGAGAATCACTTAAGATCCTGCGGCAAGAGGTTGGTGGTGATGCCGCTGTTTTAGGTTTTGTGGGAGCACCTTGGACATTGGCAACGTATATAGTGGAAGGGGGTACAACGCGCACATATACAACCATTAAGAGCATGTGCCATACAACACCACACATACTAAGGACTCTGCTTTCTCATTTGTCAAAGGCAATAGCAGATTACATCGTTTTCCAAGTGGAATCTGGGGCTCACTGCATACAAATATTTGACTCATGGGGTGGACAACTGCCACCTCATATGTGGGAACTCTGGTCAAAACCTTATATCAAAGAGATTGTAGATTTGGTCAAGAAAAAGTGCCCAGACACACCACTTGTTCTTTATATCAATGGAAATGGTGGCCTTCTCGAGCGTATGATAGACACTGGAGTTGATGTAATTGGACTCGACTGGACAGTGGATATGGCTGATGGGAGAAGAAGATTAGGTAGTGGGATTGGTGTGCAAGGAAACGTGGACCCTGCTTCTTTATTCTCTCCTCTTACTGCCCTAACAGAAGAAATTCAGAGGGTTGTGAGGTCTGCAGGACCTAGACAACACATCCTTAATCTTGGGCATGGTGTTCTTGTTGGCACACCGGAAGAAGCTGTAGCGCATTTCTTTGACGTCGCGAGGAGCTTGAAGTTTGACACACTCTCTCAAAATAACACTGCAAATGTAGCTTAA

Protein sequence

>Msa0259390

METIPTSINSGLGWKSSSLFQQSNCFNLLSSPFKPKPSLTLTKFTLTCSAASSSNDPLLVKAARGDPVSRPPAWMMRQAGRYMAIYRKLAEKHPSFRERSETTDLIVEISLQPWKAFRPDGVIIFSDILTPLPAFGIDFDIEDVRGPVIQSPIRSEEGLKVLHPIDFDKLRFVGESLKILRQEVGGDAAVLGFVGAPWTLATYIVEGGTTRTYTTIKSMCHTTPHILRTLLSHLSKAIADYIVFQVESGAHCIQIFDSWGGQLPPHMWELWSKPYIKEIVDLVKKKCPDTPLVLYINGNGGLLERMIDTGVDVIGLDWTVDMADGRRRLGSGIGVQGNVDPASLFSPLTALTEEIQRVVRSAGPRQHILNLGHGVLVGTPEEAVAHFFDVARSLKFDTLSQNNTANVA*