AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0742130


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0742130 MtrunA17_Chr5g0443561 96.904 323 10 0 1 323 1 323 0.0 641
Msa0742130 MtrunA17_Chr7g0256571 69.231 364 65 3 7 323 6 369 6.26e-179 499
Msa0742130 MtrunA17_Chr7g0256581 68.681 364 67 3 7 323 6 369 4.78e-177 494
Msa0742130 MtrunA17_Chr7g0256561 73.926 326 81 2 1 323 11 335 1.02e-175 489
Msa0742130 MtrunA17_Chr2g0322241 48.295 352 128 7 23 323 47 395 9.17e-105 311
Msa0742130 MtrunA17_Chr4g0025341 46.439 351 135 7 23 323 44 391 8.02e-98 294
Msa0742130 MtrunA17_Chr2g0329531 46.203 316 119 5 48 313 82 396 1.41e-86 266
Msa0742130 MtrunA17_Chr7g0256601 42.771 332 136 6 45 322 85 416 1.15e-85 264
Msa0742130 MtrunA17_Chr7g0256591 40.922 347 151 6 30 322 39 385 1.80e-85 262
Msa0742130 MtrunA17_Chr4g0062001 39.650 343 175 4 1 321 2 334 6.62e-79 244
Msa0742130 MtrunA17_Chr8g0376581 41.216 296 154 3 47 322 36 331 2.69e-74 232
Msa0742130 MtrunA17_Chr4g0062031 41.869 289 155 5 47 322 37 325 1.47e-72 227
Msa0742130 MtrunA17_Chr4g0062021 41.156 294 149 5 47 317 50 342 6.54e-69 218
Msa0742130 MtrunA17_Chr2g0307721 44.295 298 145 4 38 314 37 334 2.10e-67 225
Msa0742130 MtrunA17_Chr2g0307721 40.176 341 176 8 5 320 455 792 5.40e-62 210
Msa0742130 MtrunA17_Chr2g0307721 44.304 79 44 0 100 178 343 421 1.43e-13 71.6
Msa0742130 MtrunA17_Chr4g0020271 38.251 183 92 3 153 315 2 183 1.49e-35 127
Msa0742130 MtrunA17_Chr8g0370791 35.371 229 127 5 48 276 78 285 3.05e-33 126
Msa0742130 MtrunA17_Chr8g0370761 34.783 230 127 6 48 276 78 285 2.50e-32 123
Msa0742130 MtrunA17_Chr4g0062051 45.185 135 71 1 47 178 41 175 1.25e-31 117
Msa0742130 MtrunA17_Chr4g0061871 44.762 105 58 0 178 282 18 122 5.31e-26 100
Msa0742130 MtrunA17_Chr2g0300841 31.048 248 129 6 116 323 112 357 3.56e-23 98.2
Msa0742130 MtrunA17_Chr2g0300851 30.242 248 130 6 116 323 105 349 4.29e-22 95.1
Msa0742130 MtrunA17_Chr2g0300861 31.557 244 124 7 116 319 124 364 2.11e-21 93.6
Msa0742130 MtrunA17_Chr8g0370771 33.333 135 89 1 142 276 17 150 1.01e-20 89.4
Msa0742130 MtrunA17_Chr4g0062061 38.462 117 61 2 217 322 4 120 1.39e-20 85.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0742130 AT3G57030.1 56.522 345 107 2 22 323 30 374 1.73e-137 394
Msa0742130 AT5G22020.3 47.507 341 128 5 31 323 58 395 2.31e-99 298
Msa0742130 AT5G22020.1 47.507 341 128 5 31 323 58 395 2.31e-99 298
Msa0742130 AT5G22020.2 47.507 341 128 5 31 323 58 395 2.31e-99 298
Msa0742130 AT1G08470.1 46.000 350 135 7 24 323 44 389 8.55e-99 296
Msa0742130 AT3G57010.1 44.475 362 148 8 7 320 11 367 5.24e-89 271
Msa0742130 AT2G41290.1 44.444 369 149 9 10 323 9 376 2.41e-88 270
Msa0742130 AT2G41300.1 45.806 310 122 4 54 320 84 390 8.58e-87 266
Msa0742130 AT3G57020.1 43.503 354 150 7 13 320 17 366 1.33e-86 265
Msa0742130 AT3G57020.2 42.090 354 141 7 13 320 17 352 2.73e-80 248
Msa0742130 AT3G59530.3 50.206 243 112 2 39 273 75 316 7.12e-78 243
Msa0742130 AT3G59530.2 50.206 243 112 2 39 273 75 316 7.12e-78 243
Msa0742130 AT3G59530.1 50.206 243 112 2 39 273 75 316 7.12e-78 243
Msa0742130 AT1G74020.1 41.297 293 152 6 48 323 38 327 2.80e-65 209
Msa0742130 AT1G74010.1 39.932 293 155 7 48 323 37 325 3.89e-61 198
Msa0742130 AT1G74000.1 38.776 294 160 7 47 323 39 329 1.34e-59 194
Msa0742130 AT3G51430.1 32.171 258 155 6 24 280 45 283 1.16e-30 119
Msa0742130 AT3G51430.2 30.797 276 170 7 24 297 45 301 1.31e-30 119
Msa0742130 AT3G51440.1 32.422 256 150 7 49 300 70 306 2.30e-30 118
Msa0742130 AT3G51450.1 31.760 233 139 6 49 280 70 283 1.58e-28 113
Msa0742130 AT3G51420.1 31.416 226 135 6 49 273 70 276 6.67e-27 109

Find 92 sgRNAs with CRISPR-Local

Find 263 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAATACAATATACTCTTTC+TGG 0.161342 5_1:+61936949 Msa0742130:exon
ATTCTTCGACTTTGGCTTCA+TGG 0.205561 5_1:+61936680 Msa0742130:CDS
TAGGTGAAACTTCGACTTTC+CGG 0.217649 5_1:+61936657 Msa0742130:CDS
GAAATTCAGATGGGCAGTTT+TGG 0.258450 5_1:+61936765 Msa0742130:CDS
CTGTCCTTTGATCCAGAAAT+TGG 0.265268 5_1:-61933352 None:intergenic
TCAATGACAAAATATCTTAA+TGG 0.309301 5_1:+61937374 Msa0742130:three_prime_UTR
CTTTCCGGATTCTTCGACTT+TGG 0.322440 5_1:+61936672 Msa0742130:CDS
ATATTGACTTGGCCAGCATT+AGG 0.334062 5_1:-61936704 None:intergenic
CTTCTTAGCGGAGACAAAAC+TGG 0.347076 5_1:+61936527 Msa0742130:CDS
TCCATTCGCACCAGAGTTAG+AGG 0.369138 5_1:+61935920 Msa0742130:CDS
CAGGTTATCCGGACAATATA+AGG 0.377879 5_1:+61936741 Msa0742130:CDS
TGCTGTTCTTCCAGGTTATC+CGG 0.385672 5_1:+61936730 Msa0742130:CDS
TATTGACTTGGCCAGCATTA+GGG 0.387491 5_1:-61936703 None:intergenic
CCATCCGCCACGCCGGTGTA+TGG 0.411524 5_1:-61933454 None:intergenic
CAAAATATCTTAATGGAGTT+CGG 0.415781 5_1:+61937381 Msa0742130:three_prime_UTR
CTCCATGTCACCGGAGCCGT+TGG 0.420609 5_1:+61933394 Msa0742130:CDS
TGGCTTCATGGCCCTAATGC+TGG 0.424712 5_1:+61936692 Msa0742130:CDS
GACGGTTTATTTCTTCTAGT+AGG 0.425500 5_1:+61936638 Msa0742130:CDS
GCTATAAAGTTGAGTGATGA+AGG 0.432202 5_1:+61936806 Msa0742130:CDS
TTGCTGTCACTAGTTCCAAT+AGG 0.439270 5_1:+61933521 Msa0742130:CDS
CTTATATTGTCCGGATAACC+TGG 0.443834 5_1:-61936740 None:intergenic
CCAGAGTTAGAGGATATTTG+TGG 0.459327 5_1:+61935930 Msa0742130:CDS
GAATTTCTCCTTATATTGTC+CGG 0.460285 5_1:-61936749 None:intergenic
ACTCTCCGGCCCAACGGCTC+CGG 0.460954 5_1:-61933404 None:intergenic
TTGCTTAAACAAACACCGTT+GGG 0.463178 5_1:-61936614 None:intergenic
AGTATTATACTACCCATGTC+AGG 0.474480 5_1:+61937109 Msa0742130:three_prime_UTR
TATATTGTTGATGCCTACCT+TGG 0.481015 5_1:+61935996 Msa0742130:CDS
GAAGTGAATGTCTTATTAAG+TGG 0.483610 5_1:+61936581 Msa0742130:CDS
TCCTCTAACTCTGGTGCGAA+TGG 0.487071 5_1:-61935921 None:intergenic
GAAGCCAAAGTCGAAGAATC+CGG 0.487945 5_1:-61936676 None:intergenic
AAACTATAAATACCAACATA+AGG 0.492238 5_1:-61936923 None:intergenic
GCCCAACGGCTCCGGTGACA+TGG 0.497514 5_1:-61933396 None:intergenic
CATTTATATTTAAATAATTG+TGG 0.500843 5_1:+61937225 Msa0742130:three_prime_UTR
TGGATCAAAGGACAGTCTCC+AGG 0.505663 5_1:+61933360 Msa0742130:CDS
CCACAAATATCCTCTAACTC+TGG 0.512177 5_1:-61935930 None:intergenic
CTGCAGGTCCTACTACGTTA+AGG 0.516853 5_1:-61936019 None:intergenic
TTTGCTTAAACAAACACCGT+TGG 0.522071 5_1:-61936615 None:intergenic
TAATGGAGTTCGGAAAATGT+AGG 0.522107 5_1:+61937391 Msa0742130:three_prime_UTR
GATATTTGTGGGAGGCCACT+AGG 0.524182 5_1:+61935942 Msa0742130:CDS
TCCATGTCACCGGAGCCGTT+GGG 0.527613 5_1:+61933395 Msa0742130:CDS
TAATTACAATTGAGATCAGA+TGG 0.530538 5_1:+61937086 Msa0742130:three_prime_UTR
TGTCACCGGAGCCGTTGGGC+CGG 0.534102 5_1:+61933399 Msa0742130:CDS
CTTAACGTAGTAGGACCTGC+AGG 0.540126 5_1:+61936020 Msa0742130:CDS
ACACCGGCGTGGCGGATGGA+CGG 0.542691 5_1:+61933458 Msa0742130:CDS
TTATCAAATCTTAGTCCTAG+TGG 0.547763 5_1:-61935957 None:intergenic
CCATACACCGGCGTGGCGGA+TGG 0.548384 5_1:+61933454 Msa0742130:CDS
CGCTTCACTGACATATCTCA+TGG 0.548468 5_1:-61936858 None:intergenic
GGTTCCAATTTCTGGATCAA+AGG 0.550697 5_1:+61933348 Msa0742130:CDS
AATAAAAGAATCCCCTGACA+TGG 0.550973 5_1:-61937122 None:intergenic
TACCTTGGCCTTAACGTAGT+AGG 0.551747 5_1:+61936011 Msa0742130:CDS
ATGTCATTGTTGAAGCGAAA+GGG 0.551830 5_1:-61936083 None:intergenic
CAGAGTTAGAGGATATTTGT+GGG 0.555272 5_1:+61935931 Msa0742130:CDS
AGGGGAAATATTAGAAATCG+TGG 0.558229 5_1:+61936826 Msa0742130:CDS
CATGGAGTAACCGATCAGCC+TGG 0.564584 5_1:-61933378 None:intergenic
AAGTGAATGTCTTATTAAGT+GGG 0.566171 5_1:+61936582 Msa0742130:CDS
AGGACAGTCTCCAGGCTGAT+CGG 0.569322 5_1:+61933368 Msa0742130:CDS
CTTTCGCTTCAACAATGACA+TGG 0.569375 5_1:+61936085 Msa0742130:CDS
GTAATGGGGAGTAATTATGT+TGG 0.576359 5_1:+61937162 Msa0742130:three_prime_UTR
AAGTATGAAGGGGAGGAACG+TGG 0.583448 5_1:+61933487 Msa0742130:CDS
GGTGTTTGTTTAAGCAAAGA+CGG 0.590239 5_1:+61936620 Msa0742130:CDS
TATAAAGTTGAGTGATGAAG+GGG 0.593424 5_1:+61936808 Msa0742130:CDS
CAAGCACAGTCTATCAGAGA+AGG 0.594605 5_1:+61936147 Msa0742130:CDS
GTCCTACTACGTTAAGGCCA+AGG 0.595729 5_1:-61936013 None:intergenic
AATCCGTCCATCCGCCACGC+CGG 0.596699 5_1:-61933461 None:intergenic
GTATTATACTACCCATGTCA+GGG 0.600144 5_1:+61937110 Msa0742130:three_prime_UTR
AATATAAGGAGAAATTCAGA+TGG 0.600334 5_1:+61936755 Msa0742130:CDS
GAAATATTAGAAATCGTGGA+AGG 0.606501 5_1:+61936830 Msa0742130:CDS
AGTGGGCTTAATTATCCCAA+CGG 0.610826 5_1:+61936599 Msa0742130:CDS
ATGAAGGGGAGGAACGTGGT+TGG 0.613290 5_1:+61933491 Msa0742130:CDS
GATCGGTTACTCCATGTCAC+CGG 0.620224 5_1:+61933385 Msa0742130:CDS
AGCTTCTGTTGCTAACTGTG+TGG 0.621050 5_1:-61936051 None:intergenic
TCGGTGTTAATGCCTTATGT+TGG 0.621568 5_1:+61936911 Msa0742130:CDS
GTGCAAGAAAAGTTGCAGCA+TGG 0.622116 5_1:-61933294 None:intergenic
CTATAAAGTTGAGTGATGAA+GGG 0.622219 5_1:+61936807 Msa0742130:CDS
AACAAGACTCTCCGGCCCAA+CGG 0.631984 5_1:-61933410 None:intergenic
CATGTCATTGTTGAAGCGAA+AGG 0.635612 5_1:-61936084 None:intergenic
TTAACGTAGTAGGACCTGCA+GGG 0.641562 5_1:+61936021 Msa0742130:CDS
CATGAGATATGTCAGTGAAG+CGG 0.643807 5_1:+61936859 Msa0742130:CDS
ATAAAAGAATCCCCTGACAT+GGG 0.644321 5_1:-61937121 None:intergenic
ATGAGTTCAAACACGAACGA+AGG 0.656155 5_1:+61937282 Msa0742130:three_prime_UTR
TTAGCGGAGACAAAACTGGA+AGG 0.657390 5_1:+61936531 Msa0742130:CDS
CAGTTAGCAACAGAAGCTGA+AGG 0.659999 5_1:+61936056 Msa0742130:CDS
ATATAAGGAGAAATTCAGAT+GGG 0.667598 5_1:+61936756 Msa0742130:CDS
TCTCCGCTAAGAAGTAAAAG+CGG 0.672637 5_1:-61936518 None:intergenic
TACTACGTTAAGGCCAAGGT+AGG 0.676893 5_1:-61936009 None:intergenic
TATTATACTACCCATGTCAG+GGG 0.679685 5_1:+61937111 Msa0742130:three_prime_UTR
CACGGCGAAGGACCATACAC+CGG 0.690062 5_1:+61933442 Msa0742130:CDS
TAACGTAGTAGGACCTGCAG+GGG 0.691917 5_1:+61936022 Msa0742130:CDS
AGTTAGAGGATATTTGTGGG+AGG 0.696868 5_1:+61935934 Msa0742130:CDS
AGGACCATACACCGGCGTGG+CGG 0.710184 5_1:+61933450 Msa0742130:CDS
AACGTAGTAGGACCTGCAGG+GGG 0.714485 5_1:+61936023 Msa0742130:CDS
CGAAGGACCATACACCGGCG+TGG 0.716462 5_1:+61933447 Msa0742130:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATTATTAAAAAAAAAAT+TGG + chr5_1:61934549-61934568 Msa0742130:intron 0.0%
!! AGGTAAAAATAAAATAAAAA+TGG + chr5_1:61933786-61933805 Msa0742130:intron 10.0%
!! TTTGAAAAAAATATATAAGA+AGG - chr5_1:61934221-61934240 None:intergenic 10.0%
!!! TTTGAAAATTTTGAAAAATA+TGG - chr5_1:61934260-61934279 None:intergenic 10.0%
!!! AATTTTATGAAAATTTATAG+GGG - chr5_1:61934287-61934306 None:intergenic 10.0%
!!! CAATTTTATGAAAATTTATA+GGG - chr5_1:61934288-61934307 None:intergenic 10.0%
!!! ACAATTTTATGAAAATTTAT+AGG - chr5_1:61934289-61934308 None:intergenic 10.0%
!!! ATTTTCATAAAATTGTAAAT+TGG + chr5_1:61934293-61934312 Msa0742130:intron 10.0%
!!! TTTTCATAAAATTGTAAATT+GGG + chr5_1:61934294-61934313 Msa0742130:intron 10.0%
!!! TTTATAAATTCAAGATTTTT+GGG - chr5_1:61934425-61934444 None:intergenic 10.0%
!!! TTTTATAAATTCAAGATTTT+TGG - chr5_1:61934426-61934445 None:intergenic 10.0%
!!! TTTTAATAATTTAAAGTTCT+AGG - chr5_1:61934542-61934561 None:intergenic 10.0%
!!! TTTGGAATTTTAAAAATTTT+AGG - chr5_1:61934791-61934810 None:intergenic 10.0%
!!! CTTTTGTAAAAAAAAAAAAA+AGG - chr5_1:61934875-61934894 None:intergenic 10.0%
!!! TTCTTTATAAATAATTTGTT+TGG - chr5_1:61934939-61934958 None:intergenic 10.0%
!! CATTTATATTTAAATAATTG+TGG + chr5_1:61937225-61937244 Msa0742130:three_prime_UTR 10.0%
!!! TTTTTGGTACAATTTAATTT+TGG + chr5_1:61933606-61933625 Msa0742130:intron 15.0%
!!! TTGTTATTTTTTAAAACTGA+GGG - chr5_1:61934320-61934339 None:intergenic 15.0%
!!! TTTGTTATTTTTTAAAACTG+AGG - chr5_1:61934321-61934340 None:intergenic 15.0%
!!! TTATAAATTCAAGATTTTTG+GGG - chr5_1:61934424-61934443 None:intergenic 15.0%
!!! AATTTCATTGTAATCATTTT+TGG - chr5_1:61934453-61934472 None:intergenic 15.0%
!! CAGTTATAAAAAAAATTGTT+TGG - chr5_1:61934490-61934509 None:intergenic 15.0%
!! AATTTGAAAATTGAAAAGTA+AGG - chr5_1:61934849-61934868 None:intergenic 15.0%
!!! AATGATTAATACTTTGTTTT+TGG + chr5_1:61936279-61936298 Msa0742130:intron 15.0%
!!! ATGATTAATACTTTGTTTTT+GGG + chr5_1:61936280-61936299 Msa0742130:intron 15.0%
!! ATTAAATTTGATCTATATGT+TGG + chr5_1:61936472-61936491 Msa0742130:intron 15.0%
!! TATTGAATAACTAATGTATT+TGG + chr5_1:61937006-61937025 Msa0742130:intron 15.0%
!!! TCTTAACTTTTTTAATGTAA+TGG + chr5_1:61937146-61937165 Msa0742130:three_prime_UTR 15.0%
!!! CTTAACTTTTTTAATGTAAT+GGG + chr5_1:61937147-61937166 Msa0742130:three_prime_UTR 15.0%
!!! TTAACTTTTTTAATGTAATG+GGG + chr5_1:61937148-61937167 Msa0742130:three_prime_UTR 15.0%
!! ATTGATCATTCAAAAAAAAT+AGG + chr5_1:61937340-61937359 Msa0742130:three_prime_UTR 15.0%
!! TTGATCATTCAAAAAAAATA+GGG + chr5_1:61937341-61937360 Msa0742130:three_prime_UTR 15.0%
!! TTTCCAAATTCTTTCTTTAT+TGG + chr5_1:61933576-61933595 Msa0742130:intron 20.0%
!! ATACCAATAAAGAAAGAATT+TGG - chr5_1:61933582-61933601 None:intergenic 20.0%
!!! CTTTATTGGTATTCTTTTTT+TGG + chr5_1:61933590-61933609 Msa0742130:intron 20.0%
!! AATTTAGATTATTAGTGACT+AGG + chr5_1:61933702-61933721 Msa0742130:intron 20.0%
!! ATTTAGATTATTAGTGACTA+GGG + chr5_1:61933703-61933722 Msa0742130:intron 20.0%
!!! ATTTTTACCTAATAATCTAG+TGG - chr5_1:61933776-61933795 None:intergenic 20.0%
!!! ATATCGAGAAGTATATTTAA+GGG - chr5_1:61933901-61933920 None:intergenic 20.0%
!! TCGAGAATAGTTTATAATTA+TGG + chr5_1:61933922-61933941 Msa0742130:intron 20.0%
!! CGAGAATAGTTTATAATTAT+GGG + chr5_1:61933923-61933942 Msa0742130:intron 20.0%
!!! TATAAATTCAAGATTTTTGG+GGG - chr5_1:61934423-61934442 None:intergenic 20.0%
!!! ATTTTTCAAATTTTGCAAGT+TGG + chr5_1:61934694-61934713 Msa0742130:intron 20.0%
!!! TTTTTCAAATTTTGCAAGTT+GGG + chr5_1:61934695-61934714 Msa0742130:intron 20.0%
!! ACATCTTGAATAATTTATAG+GGG - chr5_1:61934757-61934776 None:intergenic 20.0%
!! CACATCTTGAATAATTTATA+GGG - chr5_1:61934758-61934777 None:intergenic 20.0%
!!! GCAAATTTTGAAAAAATTGA+GGG - chr5_1:61934818-61934837 None:intergenic 20.0%
!!! TGCAAATTTTGAAAAAATTG+AGG - chr5_1:61934819-61934838 None:intergenic 20.0%
!!! TTTTTTCAAAATTTGCAGTT+TGG + chr5_1:61934822-61934841 Msa0742130:intron 20.0%
!!! TAAATAATTTGTTTGGATAG+AGG - chr5_1:61934932-61934951 None:intergenic 20.0%
!! TGTAATTGAATCATTTGAAT+TGG + chr5_1:61934969-61934988 Msa0742130:intron 20.0%
!!! TAAACATACTCTAAAAAGTT+AGG + chr5_1:61935031-61935050 Msa0742130:intron 20.0%
!!! AAACATACTCTAAAAAGTTA+GGG + chr5_1:61935032-61935051 Msa0742130:intron 20.0%
!!! ACTTAACTCAATTTTTTTTG+AGG - chr5_1:61935205-61935224 None:intergenic 20.0%
!! TCAAAAAAAATTGAGTTAAG+TGG + chr5_1:61935204-61935223 Msa0742130:intron 20.0%
!!! TTTCATTTAATCTTTTGTTG+TGG - chr5_1:61935342-61935361 None:intergenic 20.0%
!! AAAATAAGCTAAAAATAGCT+TGG + chr5_1:61935421-61935440 Msa0742130:intron 20.0%
!! AAATAAGCTAAAAATAGCTT+GGG + chr5_1:61935422-61935441 Msa0742130:intron 20.0%
!!! TCTCAGTTTAATTTTTTTCA+TGG + chr5_1:61935737-61935756 Msa0742130:intron 20.0%
!! CTAAGATTTGATAAGAAAAA+TGG + chr5_1:61935966-61935985 Msa0742130:CDS 20.0%
!! TACACAATCACTATAAAAAA+TGG - chr5_1:61936384-61936403 None:intergenic 20.0%
!! AAACTATAAATACCAACATA+AGG - chr5_1:61936926-61936945 None:intergenic 20.0%
!! TGATCATTCAAAAAAAATAG+GGG + chr5_1:61937342-61937361 Msa0742130:three_prime_UTR 20.0%
!! TCAATGACAAAATATCTTAA+TGG + chr5_1:61937374-61937393 Msa0742130:three_prime_UTR 20.0%
!! TGCATATTTCTATTACCTAT+TGG - chr5_1:61933539-61933558 None:intergenic 25.0%
! GTAATAGAAATATGCACATT+TGG + chr5_1:61933543-61933562 Msa0742130:intron 25.0%
! TTTCCAAATTCTTCCTTTAT+TGG + chr5_1:61933641-61933660 Msa0742130:intron 25.0%
! ATACCAATAAAGGAAGAATT+TGG - chr5_1:61933647-61933666 None:intergenic 25.0%
! CAAAAGAAGAATACCAATAA+AGG - chr5_1:61933657-61933676 None:intergenic 25.0%
!! CTTTATTGGTATTCTTCTTT+TGG + chr5_1:61933655-61933674 Msa0742130:intron 25.0%
! AAAATAAAAATGGTGTGACA+TGG + chr5_1:61933796-61933815 Msa0742130:intron 25.0%
!! TATCGAGAAGTATATTTAAG+GGG - chr5_1:61933900-61933919 None:intergenic 25.0%
!! GATATCGAGAAGTATATTTA+AGG - chr5_1:61933902-61933921 None:intergenic 25.0%
!!! TTTTTTCAAATCTTGCAAGT+TGG + chr5_1:61934231-61934250 Msa0742130:intron 25.0%
!!! GAAATTTTGAAATTCGATAG+GGG - chr5_1:61934401-61934420 None:intergenic 25.0%
!!! GGAAATTTTGAAATTCGATA+GGG - chr5_1:61934402-61934421 None:intergenic 25.0%
!!! AAAGTTCTAGGAAATTCAAA+TGG - chr5_1:61934530-61934549 None:intergenic 25.0%
! AACAATGAAATTTAGCTAGA+AGG - chr5_1:61934627-61934646 None:intergenic 25.0%
! TCTAGCTAAATTTCATTGTT+TGG + chr5_1:61934627-61934646 Msa0742130:intron 25.0%
! GCACATCTTGAATAATTTAT+AGG - chr5_1:61934759-61934778 None:intergenic 25.0%
! GAAAAAATTGAGGGTTAATT+TGG - chr5_1:61934809-61934828 None:intergenic 25.0%
! AGAGATTTGAAAAACAACTT+AGG - chr5_1:61935456-61935475 None:intergenic 25.0%
!!! GATTAGTTGTATGATTTTCA+AGG + chr5_1:61935883-61935902 Msa0742130:intron 25.0%
!!! AAAGTTGATGGTAGAAAATA+AGG - chr5_1:61936194-61936213 None:intergenic 25.0%
!! AAGTGAATGTCTTATTAAGT+GGG + chr5_1:61936582-61936601 Msa0742130:CDS 25.0%
! AATATAAGGAGAAATTCAGA+TGG + chr5_1:61936755-61936774 Msa0742130:CDS 25.0%
! ATATAAGGAGAAATTCAGAT+GGG + chr5_1:61936756-61936775 Msa0742130:CDS 25.0%
!! AAAGATGGAAAACTTTTGAT+TGG + chr5_1:61936887-61936906 Msa0742130:CDS 25.0%
! AGAATACAATATACTCTTTC+TGG + chr5_1:61936949-61936968 Msa0742130:exon 25.0%
! TAATTACAATTGAGATCAGA+TGG + chr5_1:61937086-61937105 Msa0742130:three_prime_UTR 25.0%
! CAAAATATCTTAATGGAGTT+CGG + chr5_1:61937381-61937400 Msa0742130:three_prime_UTR 25.0%
!!! AGTCTTGTTTTTGATAGTCA+CGG + chr5_1:61933424-61933443 Msa0742130:CDS 30.0%
AAAGAAAGAATTTGGAAACG+TGG - chr5_1:61933574-61933593 None:intergenic 30.0%
GAAGTAAAGAGTAAAGTCAA+GGG - chr5_1:61933972-61933991 None:intergenic 30.0%
TGAAGTAAAGAGTAAAGTCA+AGG - chr5_1:61933973-61933992 None:intergenic 30.0%
! TAAGACACTAAAAGTGTGTT+TGG + chr5_1:61934012-61934031 Msa0742130:intron 30.0%
TTTGGATGATTGAATGTACT+GGG + chr5_1:61934030-61934049 Msa0742130:intron 30.0%
CTCAATGAAATTTACCTAGA+AGG - chr5_1:61934084-61934103 None:intergenic 30.0%
!!! GGGAAATTTTGAAATTCGAT+AGG - chr5_1:61934403-61934422 None:intergenic 30.0%
!! TCTAAGATTGGATGTTTTGA+GGG + chr5_1:61934592-61934611 Msa0742130:intron 30.0%
ATTATTCAAGATGTGCTAGT+TGG + chr5_1:61934763-61934782 Msa0742130:intron 30.0%
TGAAAAATCACACGCTTAAA+TGG - chr5_1:61935149-61935168 None:intergenic 30.0%
AAAAATTGAGTTAAGTGGCA+TGG + chr5_1:61935209-61935228 Msa0742130:intron 30.0%
TAAAAGACTTAGACGTTGTT+TGG + chr5_1:61935250-61935269 Msa0742130:intron 30.0%
AAACATACCCTTATTCTACA+AGG + chr5_1:61935531-61935550 Msa0742130:intron 30.0%
!! TCTCTACCTTTTGTTTCAAA+CGG + chr5_1:61935574-61935593 Msa0742130:intron 30.0%
! ATGAAACCGTTTGAAACAAA+AGG - chr5_1:61935583-61935602 None:intergenic 30.0%
CTGAAAACAGATAGAAGATT+AGG - chr5_1:61935633-61935652 None:intergenic 30.0%
!! AGTTGTATGATTTTCAAGGT+CGG + chr5_1:61935887-61935906 Msa0742130:intron 30.0%
TTATCAAATCTTAGTCCTAG+TGG - chr5_1:61935960-61935979 None:intergenic 30.0%
CAAAATGCAGATAAAGTTGA+TGG - chr5_1:61936206-61936225 None:intergenic 30.0%
! GAAGTGAATGTCTTATTAAG+TGG + chr5_1:61936581-61936600 Msa0742130:CDS 30.0%
! GAACAGCAAAAATATTGACT+TGG - chr5_1:61936718-61936737 None:intergenic 30.0%
!!! AATATTTTTGCTGTTCTTCC+AGG + chr5_1:61936722-61936741 Msa0742130:CDS 30.0%
GAATTTCTCCTTATATTGTC+CGG - chr5_1:61936752-61936771 None:intergenic 30.0%
CTATAAAGTTGAGTGATGAA+GGG + chr5_1:61936807-61936826 Msa0742130:CDS 30.0%
TATAAAGTTGAGTGATGAAG+GGG + chr5_1:61936808-61936827 Msa0742130:CDS 30.0%
GAAATATTAGAAATCGTGGA+AGG + chr5_1:61936830-61936849 Msa0742130:CDS 30.0%
!! TGGAAAACTTTTGATTGGAT+CGG + chr5_1:61936892-61936911 Msa0742130:CDS 30.0%
! CATCTTTGCACTCTTTTCAT+CGG + chr5_1:61933327-61933346 Msa0742130:CDS 35.0%
!!! TTTTCATCGGTTCCAATTTC+TGG + chr5_1:61933340-61933359 Msa0742130:CDS 35.0%
CTATCAAAAACAAGACTCTC+CGG - chr5_1:61933421-61933440 None:intergenic 35.0%
!!! GACGGATTTTGAAGTATGAA+GGG + chr5_1:61933476-61933495 Msa0742130:CDS 35.0%
!!! ACGGATTTTGAAGTATGAAG+GGG + chr5_1:61933477-61933496 Msa0742130:CDS 35.0%
AAAGGAAGAATTTGGAAACG+TGG - chr5_1:61933639-61933658 None:intergenic 35.0%
ATTATTAGTGACTAGGGAGT+AGG + chr5_1:61933709-61933728 Msa0742130:intron 35.0%
TTATTAGTGACTAGGGAGTA+GGG + chr5_1:61933710-61933729 Msa0742130:intron 35.0%
AGCTTCACCACTAGATTATT+AGG + chr5_1:61933766-61933785 Msa0742130:intron 35.0%
TAAAAATGGTGTGACATGGT+TGG + chr5_1:61933800-61933819 Msa0742130:intron 35.0%
!! ACATGGTTGGTAGATGTTAA+GGG + chr5_1:61933813-61933832 Msa0742130:intron 35.0%
GTTTGGATGATTGAATGTAC+TGG + chr5_1:61934029-61934048 Msa0742130:intron 35.0%
GAGAGAATTCAAATCCTTCT+AGG + chr5_1:61934067-61934086 Msa0742130:intron 35.0%
GAATTTCGCTATGTTTAGCT+TGG - chr5_1:61934162-61934181 None:intergenic 35.0%
!! GCAAATTTTGAGGGGTTAAA+TGG - chr5_1:61934371-61934390 None:intergenic 35.0%
ACCCCTCAAAATTTGCAAAT+TGG + chr5_1:61934375-61934394 Msa0742130:intron 35.0%
! GCCAATTTGCAAATTTTGAG+GGG - chr5_1:61934379-61934398 None:intergenic 35.0%
! GGCCAATTTGCAAATTTTGA+GGG - chr5_1:61934380-61934399 None:intergenic 35.0%
!! CATTCAAACACCTCTAAGAT+TGG + chr5_1:61934580-61934599 Msa0742130:intron 35.0%
CTCAAAACATCCAATCTTAG+AGG - chr5_1:61934593-61934612 None:intergenic 35.0%
!!! CTCTAAGATTGGATGTTTTG+AGG + chr5_1:61934591-61934610 Msa0742130:intron 35.0%
! CTCTAAAAAGTTAGGGTCAA+TGG + chr5_1:61935039-61935058 Msa0742130:intron 35.0%
GTCACTTGATCTATAACTTG+TGG - chr5_1:61935066-61935085 None:intergenic 35.0%
TCATGCCAAAATTGCTAGAT+CGG + chr5_1:61935088-61935107 Msa0742130:intron 35.0%
! AATGTCCGATCTAGCAATTT+TGG - chr5_1:61935096-61935115 None:intergenic 35.0%
AAAATCACACGCTTAAATGG+AGG - chr5_1:61935146-61935165 None:intergenic 35.0%
TTGCTTGCCTTGTAGAATAA+GGG - chr5_1:61935541-61935560 None:intergenic 35.0%
TTTGCTTGCCTTGTAGAATA+AGG - chr5_1:61935542-61935561 None:intergenic 35.0%
ATTGTTTGAGAATGCAAGCA+AGG + chr5_1:61935604-61935623 Msa0742130:intron 35.0%
!!! AATAGCTACTTTTTTGTCCG+AGG + chr5_1:61935772-61935791 Msa0742130:intron 35.0%
! AACCTTGTTGTACATATCCT+CGG - chr5_1:61935792-61935811 None:intergenic 35.0%
CAGAGTTAGAGGATATTTGT+GGG + chr5_1:61935931-61935950 Msa0742130:CDS 35.0%
TATATTGTTGATGCCTACCT+TGG + chr5_1:61935996-61936015 Msa0742130:CDS 35.0%
ATGTCATTGTTGAAGCGAAA+GGG - chr5_1:61936086-61936105 None:intergenic 35.0%
TTGTTCACTTGAGTTCAGAT+AGG + chr5_1:61936314-61936333 Msa0742130:intron 35.0%
TGTTCACTTGAGTTCAGATA+GGG + chr5_1:61936315-61936334 Msa0742130:intron 35.0%
!!! TGTTGGTCACTTTTGTTTGT+AGG + chr5_1:61936489-61936508 Msa0742130:intron 35.0%
!! ATTCCGCTTTTACTTCTTAG+CGG + chr5_1:61936515-61936534 Msa0742130:CDS 35.0%
TTGCTTAAACAAACACCGTT+GGG - chr5_1:61936617-61936636 None:intergenic 35.0%
TTTGCTTAAACAAACACCGT+TGG - chr5_1:61936618-61936637 None:intergenic 35.0%
GGTGTTTGTTTAAGCAAAGA+CGG + chr5_1:61936620-61936639 Msa0742130:CDS 35.0%
! GACGGTTTATTTCTTCTAGT+AGG + chr5_1:61936638-61936657 Msa0742130:CDS 35.0%
! AAATTCAGATGGGCAGTTTT+GGG + chr5_1:61936766-61936785 Msa0742130:CDS 35.0%
GCTATAAAGTTGAGTGATGA+AGG + chr5_1:61936806-61936825 Msa0742130:CDS 35.0%
AGGGGAAATATTAGAAATCG+TGG + chr5_1:61936826-61936845 Msa0742130:CDS 35.0%
AGTATTATACTACCCATGTC+AGG + chr5_1:61937109-61937128 Msa0742130:three_prime_UTR 35.0%
GTATTATACTACCCATGTCA+GGG + chr5_1:61937110-61937129 Msa0742130:three_prime_UTR 35.0%
TATTATACTACCCATGTCAG+GGG + chr5_1:61937111-61937130 Msa0742130:three_prime_UTR 35.0%
ATAAAAGAATCCCCTGACAT+GGG - chr5_1:61937124-61937143 None:intergenic 35.0%
AATAAAAGAATCCCCTGACA+TGG - chr5_1:61937125-61937144 None:intergenic 35.0%
! GTAATGGGGAGTAATTATGT+TGG + chr5_1:61937162-61937181 Msa0742130:three_prime_UTR 35.0%
TAATGGAGTTCGGAAAATGT+AGG + chr5_1:61937391-61937410 Msa0742130:three_prime_UTR 35.0%
! GGTTCCAATTTCTGGATCAA+AGG + chr5_1:61933348-61933367 Msa0742130:CDS 40.0%
CTGTCCTTTGATCCAGAAAT+TGG - chr5_1:61933355-61933374 None:intergenic 40.0%
!!! GGACGGATTTTGAAGTATGA+AGG + chr5_1:61933475-61933494 Msa0742130:CDS 40.0%
!!! GATTTTGAAGTATGAAGGGG+AGG + chr5_1:61933480-61933499 Msa0742130:CDS 40.0%
TTGCTGTCACTAGTTCCAAT+AGG + chr5_1:61933521-61933540 Msa0742130:CDS 40.0%
GGAGTAGGGAGACTTAAATT+GGG + chr5_1:61933724-61933743 Msa0742130:intron 40.0%
!! GACATGGTTGGTAGATGTTA+AGG + chr5_1:61933812-61933831 Msa0742130:intron 40.0%
GGAGTCTCTTAAGCATATGT+GGG + chr5_1:61933834-61933853 Msa0742130:intron 40.0%
! GGGCCAATTTGCAAATTTTG+AGG - chr5_1:61934381-61934400 None:intergenic 40.0%
AAACCCTAGCGATACTGTTT+GGG - chr5_1:61935479-61935498 None:intergenic 40.0%
TAAACCCTAGCGATACTGTT+TGG - chr5_1:61935480-61935499 None:intergenic 40.0%
ATCGCTAGGGTTTATGTAAG+TGG + chr5_1:61935486-61935505 Msa0742130:intron 40.0%
CCACAAATATCCTCTAACTC+TGG - chr5_1:61935933-61935952 None:intergenic 40.0%
CCAGAGTTAGAGGATATTTG+TGG + chr5_1:61935930-61935949 Msa0742130:CDS 40.0%
AGTTAGAGGATATTTGTGGG+AGG + chr5_1:61935934-61935953 Msa0742130:CDS 40.0%
CATGTCATTGTTGAAGCGAA+AGG - chr5_1:61936087-61936106 None:intergenic 40.0%
CTTTCGCTTCAACAATGACA+TGG + chr5_1:61936085-61936104 Msa0742130:CDS 40.0%
TCTCCGCTAAGAAGTAAAAG+CGG - chr5_1:61936521-61936540 None:intergenic 40.0%
! AGTGGGCTTAATTATCCCAA+CGG + chr5_1:61936599-61936618 Msa0742130:CDS 40.0%
TAGGTGAAACTTCGACTTTC+CGG + chr5_1:61936657-61936676 Msa0742130:CDS 40.0%
! ATTCTTCGACTTTGGCTTCA+TGG + chr5_1:61936680-61936699 Msa0742130:CDS 40.0%
!! TATTGACTTGGCCAGCATTA+GGG - chr5_1:61936706-61936725 None:intergenic 40.0%
!! ATATTGACTTGGCCAGCATT+AGG - chr5_1:61936707-61936726 None:intergenic 40.0%
CTTATATTGTCCGGATAACC+TGG - chr5_1:61936743-61936762 None:intergenic 40.0%
CAGGTTATCCGGACAATATA+AGG + chr5_1:61936741-61936760 Msa0742130:CDS 40.0%
! GAAATTCAGATGGGCAGTTT+TGG + chr5_1:61936765-61936784 Msa0742130:CDS 40.0%
CATGAGATATGTCAGTGAAG+CGG + chr5_1:61936859-61936878 Msa0742130:CDS 40.0%
AGTGAAGCGGATGAAAAAGA+TGG + chr5_1:61936872-61936891 Msa0742130:CDS 40.0%
!! TCGGTGTTAATGCCTTATGT+TGG + chr5_1:61936911-61936930 Msa0742130:CDS 40.0%
ATGAGTTCAAACACGAACGA+AGG + chr5_1:61937282-61937301 Msa0742130:three_prime_UTR 40.0%
GTGCAAGAAAAGTTGCAGCA+TGG - chr5_1:61933297-61933316 None:intergenic 45.0%
!! GTTTTTGATAGTCACGGCGA+AGG + chr5_1:61933430-61933449 Msa0742130:CDS 45.0%
GGGAGTAGGGAGACTTAAAT+TGG + chr5_1:61933723-61933742 Msa0742130:intron 45.0%
GGGAGTCTCTTAAGCATATG+TGG + chr5_1:61933833-61933852 Msa0742130:intron 45.0%
GCTAGATCGGACATTGTAAC+CGG + chr5_1:61935101-61935120 Msa0742130:intron 45.0%
TCTCCCAAACAGTATCGCTA+GGG + chr5_1:61935473-61935492 Msa0742130:intron 45.0%
GTCCGAGGATATGTACAACA+AGG + chr5_1:61935787-61935806 Msa0742130:intron 45.0%
!! ATTTTCAAGGTCGGACTGTG+TGG + chr5_1:61935896-61935915 Msa0742130:intron 45.0%
TACTACGTTAAGGCCAAGGT+AGG - chr5_1:61936012-61936031 None:intergenic 45.0%
!! TACCTTGGCCTTAACGTAGT+AGG + chr5_1:61936011-61936030 Msa0742130:CDS 45.0%
TTAACGTAGTAGGACCTGCA+GGG + chr5_1:61936021-61936040 Msa0742130:CDS 45.0%
AGCTTCTGTTGCTAACTGTG+TGG - chr5_1:61936054-61936073 None:intergenic 45.0%
CAGTTAGCAACAGAAGCTGA+AGG + chr5_1:61936056-61936075 Msa0742130:CDS 45.0%
CAAGCACAGTCTATCAGAGA+AGG + chr5_1:61936147-61936166 Msa0742130:CDS 45.0%
CTTGAGTTCAGATAGGGAGA+TGG + chr5_1:61936321-61936340 Msa0742130:intron 45.0%
CTTCTTAGCGGAGACAAAAC+TGG + chr5_1:61936527-61936546 Msa0742130:CDS 45.0%
TTAGCGGAGACAAAACTGGA+AGG + chr5_1:61936531-61936550 Msa0742130:CDS 45.0%
CTTTCCGGATTCTTCGACTT+TGG + chr5_1:61936672-61936691 Msa0742130:CDS 45.0%
GAAGCCAAAGTCGAAGAATC+CGG - chr5_1:61936679-61936698 None:intergenic 45.0%
TGCTGTTCTTCCAGGTTATC+CGG + chr5_1:61936730-61936749 Msa0742130:CDS 45.0%
CGCTTCACTGACATATCTCA+TGG - chr5_1:61936861-61936880 None:intergenic 45.0%
!!! CATTTTAATATTTATAAATA+TGG - chr5_1:61934724-61934743 None:intergenic 5.0%
!! AAAATGATTTATAATTTATA+TGG - chr5_1:61935376-61935395 None:intergenic 5.0%
!! AAAAAAAAATATTAATTGTA+AGG - chr5_1:61936424-61936443 None:intergenic 5.0%
TGGATCAAAGGACAGTCTCC+AGG + chr5_1:61933360-61933379 Msa0742130:CDS 50.0%
GATCGGTTACTCCATGTCAC+CGG + chr5_1:61933385-61933404 Msa0742130:CDS 50.0%
AAGTATGAAGGGGAGGAACG+TGG + chr5_1:61933487-61933506 Msa0742130:CDS 50.0%
AACCGGAGTTTCAACCCCAA+CGG + chr5_1:61935118-61935137 Msa0742130:intron 50.0%
CTTAAATGGAGGAGCCGTTG+GGG - chr5_1:61935135-61935154 None:intergenic 50.0%
GCTTAAATGGAGGAGCCGTT+GGG - chr5_1:61935136-61935155 None:intergenic 50.0%
CTCTCCCAAACAGTATCGCT+AGG + chr5_1:61935472-61935491 Msa0742130:intron 50.0%
TCCATTCGCACCAGAGTTAG+AGG + chr5_1:61935920-61935939 Msa0742130:CDS 50.0%
TCCTCTAACTCTGGTGCGAA+TGG - chr5_1:61935924-61935943 None:intergenic 50.0%
GATATTTGTGGGAGGCCACT+AGG + chr5_1:61935942-61935961 Msa0742130:CDS 50.0%
GTCCTACTACGTTAAGGCCA+AGG - chr5_1:61936016-61936035 None:intergenic 50.0%
CTGCAGGTCCTACTACGTTA+AGG - chr5_1:61936022-61936041 None:intergenic 50.0%
CTTAACGTAGTAGGACCTGC+AGG + chr5_1:61936020-61936039 Msa0742130:CDS 50.0%
TAACGTAGTAGGACCTGCAG+GGG + chr5_1:61936022-61936041 Msa0742130:CDS 50.0%
GAGTTCAGATAGGGAGATGG+TGG + chr5_1:61936324-61936343 Msa0742130:intron 50.0%
! ATAGGGAGATGGTGGCTTTG+AGG + chr5_1:61936332-61936351 Msa0742130:intron 50.0%
AGGACAGTCTCCAGGCTGAT+CGG + chr5_1:61933368-61933387 Msa0742130:CDS 55.0%
CATGGAGTAACCGATCAGCC+TGG - chr5_1:61933381-61933400 None:intergenic 55.0%
AACAAGACTCTCCGGCCCAA+CGG - chr5_1:61933413-61933432 None:intergenic 55.0%
ATGAAGGGGAGGAACGTGGT+TGG + chr5_1:61933491-61933510 Msa0742130:CDS 55.0%
AGCCGTTGGGGTTGAAACTC+CGG - chr5_1:61935123-61935142 None:intergenic 55.0%
CGCTTAAATGGAGGAGCCGT+TGG - chr5_1:61935137-61935156 None:intergenic 55.0%
AACGTAGTAGGACCTGCAGG+GGG + chr5_1:61936023-61936042 Msa0742130:CDS 55.0%
TGGCTTCATGGCCCTAATGC+TGG + chr5_1:61936692-61936711 Msa0742130:CDS 55.0%
TCCATGTCACCGGAGCCGTT+GGG + chr5_1:61933395-61933414 Msa0742130:CDS 60.0%
CACGGCGAAGGACCATACAC+CGG + chr5_1:61933442-61933461 Msa0742130:CDS 60.0%
AGTAGGACCTGCAGGGGGTT+TGG + chr5_1:61936028-61936047 Msa0742130:CDS 60.0%
CTCCATGTCACCGGAGCCGT+TGG + chr5_1:61933394-61933413 Msa0742130:CDS 65.0%
CGAAGGACCATACACCGGCG+TGG + chr5_1:61933447-61933466 Msa0742130:CDS 65.0%
AGGACCATACACCGGCGTGG+CGG + chr5_1:61933450-61933469 Msa0742130:CDS 65.0%
AATCCGTCCATCCGCCACGC+CGG - chr5_1:61933464-61933483 None:intergenic 65.0%
TGTGTGGCCAAACCCCCTGC+AGG - chr5_1:61936038-61936057 None:intergenic 65.0%
GCCCAACGGCTCCGGTGACA+TGG - chr5_1:61933399-61933418 None:intergenic 70.0%
TGTCACCGGAGCCGTTGGGC+CGG + chr5_1:61933399-61933418 Msa0742130:CDS 70.0%
ACTCTCCGGCCCAACGGCTC+CGG - chr5_1:61933407-61933426 None:intergenic 70.0%
CCATCCGCCACGCCGGTGTA+TGG - chr5_1:61933457-61933476 None:intergenic 70.0%
! CCATACACCGGCGTGGCGGA+TGG + chr5_1:61933454-61933473 Msa0742130:CDS 70.0%
!! ACACCGGCGTGGCGGATGGA+CGG + chr5_1:61933458-61933477 Msa0742130:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 61933238 61937420 61933238 ID=Msa0742130;Name=Msa0742130
chr5_1 mRNA 61933238 61937420 61933238 ID=Msa0742130-mRNA-1;Parent=Msa0742130;Name=Msa0742130-mRNA-1;_AED=0.15;_eAED=0.15;_QI=36|1|1|1|0.66|0.5|4|414|323
chr5_1 exon 61933238 61933542 61933238 ID=Msa0742130-mRNA-1:exon:18062;Parent=Msa0742130-mRNA-1
chr5_1 exon 61935905 61936168 61935905 ID=Msa0742130-mRNA-1:exon:18063;Parent=Msa0742130-mRNA-1
chr5_1 exon 61936511 61936983 61936511 ID=Msa0742130-mRNA-1:exon:18064;Parent=Msa0742130-mRNA-1
chr5_1 exon 61937041 61937420 61937041 ID=Msa0742130-mRNA-1:exon:18065;Parent=Msa0742130-mRNA-1
chr5_1 five_prime_UTR 61933238 61933273 61933238 ID=Msa0742130-mRNA-1:five_prime_utr;Parent=Msa0742130-mRNA-1
chr5_1 CDS 61933274 61933542 61933274 ID=Msa0742130-mRNA-1:cds;Parent=Msa0742130-mRNA-1
chr5_1 CDS 61935905 61936168 61935905 ID=Msa0742130-mRNA-1:cds;Parent=Msa0742130-mRNA-1
chr5_1 CDS 61936511 61936949 61936511 ID=Msa0742130-mRNA-1:cds;Parent=Msa0742130-mRNA-1
chr5_1 three_prime_UTR 61936950 61936983 61936950 ID=Msa0742130-mRNA-1:three_prime_utr;Parent=Msa0742130-mRNA-1
chr5_1 three_prime_UTR 61937041 61937420 61937041 ID=Msa0742130-mRNA-1:three_prime_utr;Parent=Msa0742130-mRNA-1
Gene Sequence

>Msa0742130

ATGAACTTCAAAGACAGCATCCATGCTGCAACTTTTCTTGCACTCTTCTCTTGCATCTTTGCACTCTTTTCATCGGTTCCAATTTCTGGATCAAAGGACAGTCTCCAGGCTGATCGGTTACTCCATGTCACCGGAGCCGTTGGGCCGGAGAGTCTTGTTTTTGATAGTCACGGCGAAGGACCATACACCGGCGTGGCGGATGGACGGATTTTGAAGTATGAAGGGGAGGAACGTGGTTGGACTGAATTTGCTGTCACTAGTTCCAATAGGTCGGACTGTGTGGTTCCATTCGCACCAGAGTTAGAGGATATTTGTGGGAGGCCACTAGGACTAAGATTTGATAAGAAAAATGGAGATTTGTATATTGTTGATGCCTACCTTGGCCTTAACGTAGTAGGACCTGCAGGGGGTTTGGCCACACAGTTAGCAACAGAAGCTGAAGGCACACCCTTTCGCTTCAACAATGACATGGACATTAGTGAAGATGAAGATGTGATTTACTTCACTGATTCAAGCACAGTCTATCAGAGAAGGCAAATTCCGCTTTTACTTCTTAGCGGAGACAAAACTGGAAGGTTAATGAAATATGACAAGTCAACGAGAGAAGTGAATGTCTTATTAAGTGGGCTTAATTATCCCAACGGTGTTTGTTTAAGCAAAGACGGTTTATTTCTTCTAGTAGGTGAAACTTCGACTTTCCGGATTCTTCGACTTTGGCTTCATGGCCCTAATGCTGGCCAAGTCAATATTTTTGCTGTTCTTCCAGGTTATCCGGACAATATAAGGAGAAATTCAGATGGGCAGTTTTGGGTTGCTTTGCATAATGCAGCTATAAAGTTGAGTGATGAAGGGGAAATATTAGAAATCGTGGAAGGAAAGACCATGAGATATGTCAGTGAAGCGGATGAAAAAGATGGAAAACTTTTGATTGGATCGGTGTTAATGCCTTATGTTGGTATTTATAGTTTATGA

Protein sequence

>Msa0742130

MNFKDSIHAATFLALFSCIFALFSSVPISGSKDSLQADRLLHVTGAVGPESLVFDSHGEGPYTGVADGRILKYEGEERGWTEFAVTSSNRSDCVVPFAPELEDICGRPLGLRFDKKNGDLYIVDAYLGLNVVGPAGGLATQLATEAEGTPFRFNNDMDISEDEDVIYFTDSSTVYQRRQIPLLLLSGDKTGRLMKYDKSTREVNVLLSGLNYPNGVCLSKDGLFLLVGETSTFRILRLWLHGPNAGQVNIFAVLPGYPDNIRRNSDGQFWVALHNAAIKLSDEGEILEIVEGKTMRYVSEADEKDGKLLIGSVLMPYVGIYSL*