AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1404790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1404790 MtrunA17_Chr4g0064571 95.449 813 11 1 13 825 7 793 0.0 1594
Msa1404790 MtrunA17_Chr2g0292751 44.886 704 366 10 133 820 629 1326 0.0 571
Msa1404790 MtrunA17_Chr8g0380401 42.394 710 373 11 135 819 674 1372 3.01e-170 529
Msa1404790 MtrunA17_Chr2g0292401 40.028 712 402 10 128 819 131 837 1.10e-152 468
Msa1404790 MtrunA17_Chr4g0067361 41.270 315 172 5 117 426 538 844 1.37e-64 233
Msa1404790 MtrunA17_Chr7g0254961 30.544 239 150 6 209 442 39 266 2.95e-22 99.0
Msa1404790 MtrunA17_Chr3g0126061 30.544 239 150 6 209 442 40 267 7.37e-22 97.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1404790 AT5G20300.4 52.709 812 340 7 16 822 1 773 0.0 870
Msa1404790 AT5G20300.1 52.709 812 340 7 16 822 1 773 0.0 870
Msa1404790 AT5G20300.5 52.709 812 340 7 16 822 1 773 0.0 870
Msa1404790 AT5G20300.2 52.709 812 340 7 16 822 1 773 0.0 870
Msa1404790 AT5G20300.3 57.143 651 271 4 173 822 2 645 0.0 791
Msa1404790 AT2G16640.2 42.915 741 375 12 106 820 477 1195 0.0 570
Msa1404790 AT2G16640.1 42.915 741 375 12 106 820 477 1195 0.0 570
Msa1404790 AT2G16640.3 42.915 741 375 12 106 820 477 1195 0.0 570
Msa1404790 AT3G16620.1 41.745 745 405 12 92 820 346 1077 8.40e-179 543
Msa1404790 AT4G02510.1 42.625 739 386 13 102 815 758 1483 1.76e-174 543
Msa1404790 AT4G02510.4 42.625 739 386 13 102 815 758 1483 1.76e-174 543
Msa1404790 AT4G02510.3 42.625 739 386 13 102 815 758 1483 1.76e-174 543
Msa1404790 AT4G02510.2 42.625 739 386 13 102 815 758 1483 1.76e-174 543
Msa1404790 AT5G05000.1 30.769 247 155 5 209 450 38 273 5.58e-25 107
Msa1404790 AT5G05000.2 30.769 247 155 5 209 450 38 273 5.58e-25 107
Msa1404790 AT5G05000.3 30.769 247 155 5 209 450 38 273 5.58e-25 107
Msa1404790 AT1G02280.1 31.250 208 129 4 209 411 36 234 2.47e-24 104
Msa1404790 AT1G02280.2 31.250 208 129 4 209 411 36 234 2.47e-24 104
Msa1404790 AT4G15810.1 35.000 180 106 5 108 284 532 703 1.28e-18 91.7

Find 209 sgRNAs with CRISPR-Local

Find 398 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTATTTCTCTTCACATTAT+TGG 0.185965 tig0023091:+19423 None:intergenic
ATCAGGGAAAAGATGAAATT+TGG 0.190393 tig0023091:-17693 Msa1404790:three_prime_UTR
GTTGTTCAATAATCAGTATT+TGG 0.199042 tig0023091:-17494 Msa1404790:three_prime_UTR
TAGCACTAACAGTTGCTTTC+AGG 0.215246 tig0023091:+17904 None:intergenic
TCAGTGCCCTAGAAATATTT+TGG 0.225345 tig0023091:-19074 Msa1404790:CDS
AAACTCATAACCGAGGTATT+TGG 0.236608 tig0023091:-19289 Msa1404790:CDS
TTTCAGAATGGTGTGGAATT+AGG 0.261501 tig0023091:-18953 Msa1404790:CDS
CATGTTGGTTTGCTATTTCT+CGG 0.265205 tig0023091:+19665 None:intergenic
CGGCTTGATCTGATCAATTC+TGG 0.269125 tig0023091:-19334 Msa1404790:CDS
AGAAGATTATCTGGATGAAT+TGG 0.273652 tig0023091:-18723 Msa1404790:CDS
TGACAGTTCCCACAATTTCT+TGG 0.276558 tig0023091:+19497 None:intergenic
TGCATTTGTACCAAAGTTCT+AGG 0.285984 tig0023091:-18998 Msa1404790:CDS
ATCATCAATTCCACTTTGAT+TGG 0.291825 tig0023091:+18859 None:intergenic
TAATCTAAATAGTCGCAAAA+TGG 0.302676 tig0023091:-17883 Msa1404790:CDS
ATCTCGCCAACGCCGTTATC+AGG 0.315091 tig0023091:-21453 Msa1404790:CDS
TTTGGAAGTCTCTTTAGTTT+AGG 0.317762 tig0023091:-17547 Msa1404790:three_prime_UTR
TCTGGTAACTGAACAGGTTC+TGG 0.320411 tig0023091:+18575 None:intergenic
GAAAGTCCTCGAAAGATATT+AGG 0.321575 tig0023091:-17748 Msa1404790:three_prime_UTR
ATCTGTTGGTGGTAAAGATA+TGG 0.331588 tig0023091:-18261 Msa1404790:CDS
CTCGGGCTCCACTGCTACTA+AGG 0.331711 tig0023091:+19683 None:intergenic
TTTCCCTCTGAAACGGAAAA+TGG 0.337202 tig0023091:+17638 None:intergenic
GGTGTTTCTTTGACATCTTT+CGG 0.338289 tig0023091:-18179 Msa1404790:CDS
ATTTACGTCACCTAGAACTT+TGG 0.339961 tig0023091:+18988 None:intergenic
CTTGAGGATACTTTGCTAAT+CGG 0.340373 tig0023091:-18131 Msa1404790:CDS
TCTCTTCATCGCAACACAGC+TGG 0.344702 tig0023091:+20539 None:intergenic
TTGTTCAATAATCAGTATTT+GGG 0.348419 tig0023091:-17493 Msa1404790:three_prime_UTR
AGGTATTTGGTGCGGCAATC+TGG 0.352278 tig0023091:-19276 Msa1404790:CDS
GTAATTTACAATCTGAGTTC+AGG 0.359349 tig0023091:-17938 Msa1404790:CDS
CAATCTCAACATAGTGGAAA+TGG 0.360741 tig0023091:-19874 Msa1404790:CDS
CATTTGTTTCTTTAAGTAAA+GGG 0.362091 tig0023091:+18688 None:intergenic
TGCTGGCCGTATGGAAGGTC+AGG 0.366462 tig0023091:-18084 Msa1404790:CDS
TTAGTAGTATATGAACTTAT+CGG 0.367116 tig0023091:-17362 Msa1404790:three_prime_UTR
ACCTGTTCAGTTACCAGATA+TGG 0.371990 tig0023091:-18570 Msa1404790:CDS
CAGGATGGCCGAGTGGTCTA+AGG 0.372570 tig0023091:-22271 None:intergenic
GAAGGTTCTGTTACATAGAA+AGG 0.373015 tig0023091:-17790 Msa1404790:CDS
AATCTAAATAGTCGCAAAAT+GGG 0.373823 tig0023091:-17882 Msa1404790:CDS
TGGTCGCAAAGGTTCTTTAT+CGG 0.375336 tig0023091:-19759 Msa1404790:CDS
TGATAATTCTGATGATCAAC+AGG 0.375448 tig0023091:-18603 Msa1404790:CDS
CTTAGAGGAACAGCCATATC+TGG 0.378915 tig0023091:+18557 None:intergenic
CCACACCATTCTGAAACTTA+AGG 0.380198 tig0023091:+18960 None:intergenic
GAACAGGTCTCACAAGTAAT+TGG 0.381848 tig0023091:+18483 None:intergenic
ATACTTGTCCTTGGTAAAAC+AGG 0.383290 tig0023091:-19604 Msa1404790:CDS
GATCTCCAAACCTGTCCATT+AGG 0.394376 tig0023091:+19037 None:intergenic
ACAAATGAACATCTAAGATT+GGG 0.395798 tig0023091:+17464 None:intergenic
ATCTGGATGAATTGGAATAC+AGG 0.397869 tig0023091:-18715 Msa1404790:CDS
CAATCTGAATCAAAACTTAG+AGG 0.397923 tig0023091:+18542 None:intergenic
TACAAATGAACATCTAAGAT+TGG 0.398463 tig0023091:+17463 None:intergenic
TTCCGCCTTCTCCAGCGGCT+TGG 0.405120 tig0023091:-19802 Msa1404790:CDS
TTAAAATTTGTGATTAATGC+TGG 0.411220 tig0023091:-18101 Msa1404790:CDS
GGGGAGAAAATCCTTCCTAA+TGG 0.412001 tig0023091:-19052 Msa1404790:CDS
CGTTGGCGAGATCAATGAAT+TGG 0.414229 tig0023091:+21464 None:intergenic
TCAATGAATTGGACAATAGC+TGG 0.419507 tig0023091:+21475 None:intergenic
AAGGCGCCAGACTCAAGTTC+TGG 0.423851 tig0023091:-22252 Msa1404790:intron
TCCTTCCTAATGGACAGGTT+TGG 0.424157 tig0023091:-19042 Msa1404790:CDS
TATTAAAGCACAGAAACTTT+GGG 0.428669 tig0023091:-17419 Msa1404790:three_prime_UTR
TCAAAGTACAAAACGATGTC+TGG 0.432440 tig0023091:+19358 None:intergenic
CGAAGACCAGAACTTGAGTC+TGG 0.433002 tig0023091:+22246 None:intergenic
CCACATCGTGATCCCATCCT+TGG 0.434462 tig0023091:+18453 None:intergenic
TCATTTGTTTCTTTAAGTAA+AGG 0.434781 tig0023091:+18687 None:intergenic
ATATTAAAGCACAGAAACTT+TGG 0.435798 tig0023091:-17420 Msa1404790:three_prime_UTR
CACATCGTGATCCCATCCTT+GGG 0.436716 tig0023091:+18454 None:intergenic
GGCAGCTGGTATGCCTCAAT+TGG 0.440174 tig0023091:-19641 Msa1404790:CDS
TATGAACTTATCGGTTCAAC+AGG 0.442021 tig0023091:-17353 Msa1404790:three_prime_UTR
ATTGAACAACAATGCACAAA+AGG 0.442700 tig0023091:+17507 None:intergenic
CACAATTTCTTGGATGCAAT+CGG 0.444607 tig0023091:+19507 None:intergenic
TCTGCAAGGATGCAGAGATA+TGG 0.446356 tig0023091:-17662 Msa1404790:three_prime_UTR
GCCATATCTGGTAACTGAAC+AGG 0.446797 tig0023091:+18569 None:intergenic
GAAGTCTCTTTAGTTTAGGC+TGG 0.451091 tig0023091:-17543 Msa1404790:three_prime_UTR
CTCTTCATCGCAACACAGCT+GGG 0.455927 tig0023091:+20540 None:intergenic
ATCAAATATAGAGTTTATAG+TGG 0.457971 tig0023091:+19567 None:intergenic
TTTGATTCGTGCTGAGGAAA+CGG 0.459088 tig0023091:-19722 Msa1404790:CDS
ACCAAGGACAAGTATTCTGC+AGG 0.459184 tig0023091:+19612 None:intergenic
ATGTTGGTTTGCTATTTCTC+GGG 0.459728 tig0023091:+19666 None:intergenic
GGATACTTTGGCAAAGGTTG+AGG 0.461427 tig0023091:-19842 Msa1404790:CDS
GTAGCATTGCCGATTCCGTC+TGG 0.464728 tig0023091:-19973 Msa1404790:CDS
GCTTAAGTTGTCATTTCTGA+TGG 0.467696 tig0023091:+18007 None:intergenic
TTTGATGTGCCAGACGGAAT+CGG 0.471290 tig0023091:+19964 None:intergenic
TCCTGCAGAATACTTGTCCT+TGG 0.471790 tig0023091:-19613 Msa1404790:CDS
AATTGAGAAAACTGCAACCA+AGG 0.474454 tig0023091:+17815 None:intergenic
AAGAGAGGACTGTCATTGTC+AGG 0.475241 tig0023091:+17985 None:intergenic
CATTATTGGTAGAGGAAGGC+AGG 0.481129 tig0023091:+19437 None:intergenic
ATCAGGCAATGTTAGATTCA+AGG 0.481132 tig0023091:-19132 Msa1404790:CDS
TCTTGGATGCAATCGGTAGC+AGG 0.484735 tig0023091:+19514 None:intergenic
CATCCTTGGGGATCAAGAAC+AGG 0.487336 tig0023091:+18467 None:intergenic
GTAGAGGAAGGCAGGAAACC+AGG 0.489089 tig0023091:+19445 None:intergenic
GAAAGGAGATGGGGCAGAGA+AGG 0.491277 tig0023091:+18908 None:intergenic
TTACTTTCAGACAAAGAAGA+AGG 0.492858 tig0023091:-18821 Msa1404790:CDS
TGGAAGACGGAAGGATACTT+TGG 0.494840 tig0023091:-19854 Msa1404790:CDS
AAATTGTGGGAACTGTCAAC+GGG 0.494864 tig0023091:-19492 Msa1404790:CDS
TCCCTCCTTAAGTTTCAGAA+TGG 0.495351 tig0023091:-18965 Msa1404790:CDS
GAAAATCCTTCCTAATGGAC+AGG 0.496835 tig0023091:-19047 Msa1404790:CDS
ACTGGCCAAGCCGCTGGAGA+AGG 0.499320 tig0023091:+19797 None:intergenic
TGAGCATTTACAAATTGCCT+TGG 0.501650 tig0023091:-17832 Msa1404790:CDS
TCTCTTCACATTATTGGTAG+AGG 0.504702 tig0023091:+19429 None:intergenic
TAACAGGGACGAAAGGAGAT+GGG 0.505555 tig0023091:+18898 None:intergenic
CGATTGCATCCAAGAAATTG+TGG 0.509792 tig0023091:-19506 Msa1404790:CDS
ACAGAACCTAATATCTTTCG+AGG 0.513480 tig0023091:+17742 None:intergenic
GGCCAAGCCGCTGGAGAAGG+CGG 0.516150 tig0023091:+19800 None:intergenic
TGCAGCCTATGTCAATCCGA+TGG 0.518557 tig0023091:-18315 Msa1404790:CDS
GAAATTGTGGGAACTGTCAA+CGG 0.521304 tig0023091:-19493 Msa1404790:CDS
CTGTTCTTGATCCCCAAGGA+TGG 0.521612 tig0023091:-18466 Msa1404790:CDS
GTGTTAAATGAAAGTGCAAA+TGG 0.521623 tig0023091:-17311 Msa1404790:three_prime_UTR
TATTTCTAGGGCACTGAGGA+TGG 0.523674 tig0023091:+19080 None:intergenic
AGAGTTAACCTTAGTAGCAG+TGG 0.524095 tig0023091:-19691 Msa1404790:CDS
ATAACGTTTATTGATACCCC+TGG 0.524878 tig0023091:-19463 Msa1404790:CDS
GTAACAGGGACGAAAGGAGA+TGG 0.527370 tig0023091:+18897 None:intergenic
AATGTATATGCCTCTGTTGT+GGG 0.528781 tig0023091:-18386 Msa1404790:CDS
AATACAGCAGTATATACATC+AGG 0.529432 tig0023091:-19149 Msa1404790:CDS
CTTAAGTTGTCATTTCTGAT+GGG 0.530243 tig0023091:+18008 None:intergenic
CGGTTATGAGTTTCAAAAGT+GGG 0.531512 tig0023091:+19299 None:intergenic
GTAACTTCTCCTTGCGTCTA+CGG 0.535519 tig0023091:+18654 None:intergenic
GTCCTTGGTAAAACAGGAGT+TGG 0.536410 tig0023091:-19598 Msa1404790:CDS
TGGAATTGATGATGAAATTG+AGG 0.537206 tig0023091:-18849 Msa1404790:CDS
GGCAACTTTGATTCGTGCTG+AGG 0.539713 tig0023091:-19728 Msa1404790:CDS
TTTCATGTGTTGCAGTAGGT+AGG 0.541292 tig0023091:-21527 Msa1404790:intron
ACAAATGCATAAGAATAAGC+AGG 0.543429 tig0023091:-18363 Msa1404790:CDS
ATTTATCAATCTCAACATAG+TGG 0.546709 tig0023091:-19880 Msa1404790:CDS
TAATTAACAGTATATCCGTT+AGG 0.548451 tig0023091:+19202 None:intergenic
TTTGTCAGGATTCGTATGGA+TGG 0.552263 tig0023091:+18779 None:intergenic
ATAATGTGAAGAGAAATAAG+AGG 0.552411 tig0023091:-19420 Msa1404790:CDS
AAAGTATTACTGCCTGATAA+CGG 0.554124 tig0023091:+21441 None:intergenic
GATGGGGCAGAGAAGGAACT+CGG 0.556331 tig0023091:+18915 None:intergenic
TTCACATTATTGGTAGAGGA+AGG 0.558967 tig0023091:+19433 None:intergenic
CGCTCTGTATCCAATCAAAG+TGG 0.559680 tig0023091:-18869 Msa1404790:CDS
GGAACTCGGGCACTGTTTGT+CGG 0.561687 tig0023091:+18929 None:intergenic
GGTTCTTTATCGGATGCACC+TGG 0.562373 tig0023091:-19749 Msa1404790:CDS
CCAGTCAAAAGAAAACCTCT+TGG 0.562419 tig0023091:-19779 Msa1404790:CDS
GGTGTTGACGTTCAATCTGT+TGG 0.564246 tig0023091:-18275 Msa1404790:CDS
GAATGTATATGCCTCTGTTG+TGG 0.564521 tig0023091:-18387 Msa1404790:CDS
CATTAAGATCTTCACTTGGA+CGG 0.569290 tig0023091:+21406 None:intergenic
TCCAAACCTGTCCATTAGGA+AGG 0.569812 tig0023091:+19041 None:intergenic
GCAAACCAACATGAGGCAGC+TGG 0.573659 tig0023091:-19655 Msa1404790:CDS
CAGCACGAATCAAAGTTGCC+AGG 0.573919 tig0023091:+19731 None:intergenic
CAATGAATTGGACAATAGCT+GGG 0.574530 tig0023091:+21476 None:intergenic
GGTCAGGGACAAGTGGCGCA+CGG 0.574870 tig0023091:-18068 Msa1404790:CDS
ATATACATTCTTCTTTACTT+CGG 0.576190 tig0023091:+18400 None:intergenic
AGAAAACCTCTTGGTCGCAA+AGG 0.576656 tig0023091:-19770 Msa1404790:CDS
TAGAGGAAGGCAGGAAACCA+GGG 0.579361 tig0023091:+19446 None:intergenic
CCGTCTCTTTATTGAAAGAG+AGG 0.581560 tig0023091:+17970 None:intergenic
TGCATCTGAAGCTTGCTGCA+AGG 0.583506 tig0023091:+19906 None:intergenic
GATTGCATCCAAGAAATTGT+GGG 0.583925 tig0023091:-19505 Msa1404790:CDS
AGGACCCATCGGATTGACAT+AGG 0.584731 tig0023091:+18310 None:intergenic
ATGGGGCAGAGAAGGAACTC+GGG 0.585099 tig0023091:+18916 None:intergenic
GCATACCAGCTGCCTCATGT+TGG 0.587195 tig0023091:+19650 None:intergenic
ACGGAAGGATACTTTGGCAA+AGG 0.588504 tig0023091:-19848 Msa1404790:CDS
GTTGACGTTCAATCTGTTGG+TGG 0.589125 tig0023091:-18272 Msa1404790:CDS
TAGAACTGCTCTGATTACTC+TGG 0.589157 tig0023091:+19929 None:intergenic
TGTTCTTGATCCCCAAGGAT+GGG 0.591666 tig0023091:-18465 Msa1404790:CDS
ATGGGTCCTAGTTACTCTAT+CGG 0.592824 tig0023091:-18296 Msa1404790:CDS
TGTGATTAATGCTGGCCGTA+TGG 0.596004 tig0023091:-18093 Msa1404790:CDS
ATTAATGCTGGCCGTATGGA+AGG 0.596929 tig0023091:-18089 Msa1404790:CDS
CTACGTGGGTGCAAAACTTG+AGG 0.597691 tig0023091:-18147 Msa1404790:CDS
GCTGTGTTGCGATGAAGAGA+AGG 0.597721 tig0023091:-20536 Msa1404790:CDS
AACATAGTGGAAATGGAAGA+CGG 0.597730 tig0023091:-19867 Msa1404790:CDS
CCAAGGATGGGATCACGATG+TGG 0.599335 tig0023091:-18453 Msa1404790:CDS
TTACTGCCTGATAACGGCGT+TGG 0.599562 tig0023091:+21447 None:intergenic
AATAAAGAGACGGTGTTGAG+TGG 0.600052 tig0023091:-17960 Msa1404790:CDS
GTCTGGCGCCTTAGACCACT+CGG 0.605648 tig0023091:+22263 None:intergenic
GTTGCAGTAGGTAGGATGAA+AGG 0.605675 tig0023091:-21519 Msa1404790:intron
TACAGAGCGATGGCGTAACA+GGG 0.607184 tig0023091:+18883 None:intergenic
ACTGCTCTGATTACTCTGGT+TGG 0.608053 tig0023091:+19933 None:intergenic
AGAAGAGTACCGTAGACGCA+AGG 0.608546 tig0023091:-18663 Msa1404790:CDS
AAAGAACCTTTGCGACCAAG+AGG 0.609848 tig0023091:+19764 None:intergenic
CCTTAAGTTTCAGAATGGTG+TGG 0.610008 tig0023091:-18960 Msa1404790:CDS
GCAGCCTATGTCAATCCGAT+GGG 0.610969 tig0023091:-18314 Msa1404790:CDS
TATGGAAGGTCAGGGACAAG+TGG 0.611077 tig0023091:-18075 Msa1404790:CDS
TAGTGGAAATGGAAGACGGA+AGG 0.611895 tig0023091:-19863 Msa1404790:CDS
TCTGGATGAATTGGAATACA+GGG 0.613064 tig0023091:-18714 Msa1404790:CDS
TCGGTTATGAGTTTCAAAAG+TGG 0.613599 tig0023091:+19298 None:intergenic
TCATCCTCATCTATTCCAGA+AGG 0.615247 tig0023091:-19226 Msa1404790:CDS
CTGCAGGAGAAGTCCAATTG+AGG 0.616507 tig0023091:+19628 None:intergenic
CCTCTCTTTCAATAAAGAGA+CGG 0.623279 tig0023091:-17970 Msa1404790:CDS
GATGGCGTAACAGGGACGAA+AGG 0.623297 tig0023091:+18891 None:intergenic
CAAATGAACATCTAAGATTG+GGG 0.626040 tig0023091:+17465 None:intergenic
TCTATTCCAGAAGGACCTAA+CGG 0.628397 tig0023091:-19217 Msa1404790:CDS
CACCATTCTGAAACTTAAGG+AGG 0.630632 tig0023091:+18963 None:intergenic
GGTCATTATCAACAAGGCAG+CGG 0.634552 tig0023091:+18504 None:intergenic
TGGTCATTAAGATCTTCACT+TGG 0.635068 tig0023091:+21402 None:intergenic
AGGTCCTTCTGGAATAGATG+AGG 0.635072 tig0023091:+19222 None:intergenic
TCAACACCGATAGAGTAACT+AGG 0.636344 tig0023091:+18290 None:intergenic
CTTGTCCCTGACCTTCCATA+CGG 0.638607 tig0023091:+18078 None:intergenic
ACCATTCTGAAACTTAAGGA+GGG 0.641356 tig0023091:+18964 None:intergenic
ATCTAAATAGTCGCAAAATG+GGG 0.642485 tig0023091:-17881 Msa1404790:CDS
AACAGGGACGAAAGGAGATG+GGG 0.643949 tig0023091:+18899 None:intergenic
CAAGGATGGGATCACGATGT+GGG 0.648192 tig0023091:-18452 Msa1404790:CDS
ATGCATTTGTCCCACAACAG+AGG 0.649384 tig0023091:+18376 None:intergenic
GAAGAGTTTGATGTGCCAGA+CGG 0.650267 tig0023091:+19958 None:intergenic
GGTAACTGAACAGGTTCTGG+AGG 0.651243 tig0023091:+18578 None:intergenic
GCTGGCCGTATGGAAGGTCA+GGG 0.656209 tig0023091:-18083 Msa1404790:CDS
TTTGATTGGATACAGAGCGA+TGG 0.656620 tig0023091:+18873 None:intergenic
AGAGGAAGGCAGGAAACCAG+GGG 0.656772 tig0023091:+19447 None:intergenic
TAGAAAGGAAATCTAGAACA+TGG 0.664040 tig0023091:-17775 Msa1404790:exon
CATAACCGAGGTATTTGGTG+CGG 0.667741 tig0023091:-19284 Msa1404790:CDS
AAGTACAAAACGATGTCTGG+AGG 0.667898 tig0023091:+19361 None:intergenic
ATAGAGTAACTAGGACCCAT+CGG 0.669102 tig0023091:+18299 None:intergenic
AGTGAAGATCTTAATGACCA+AGG 0.669591 tig0023091:-21399 Msa1404790:intron
AGGTTGAAAAGCATTAGTCG+TGG 0.671619 tig0023091:+19534 None:intergenic
AGAAATAGCAAACCAACATG+AGG 0.671633 tig0023091:-19662 Msa1404790:CDS
AGACCTGTTCTTGATCCCCA+AGG 0.680894 tig0023091:-18470 Msa1404790:CDS
ACATCGTGATCCCATCCTTG+GGG 0.684919 tig0023091:+18455 None:intergenic
AACAAGTCAGGATGGCCGAG+TGG 0.691011 tig0023091:-22278 None:intergenic
ATTTGGTGAAGCATTCTGCA+AGG 0.692556 tig0023091:-17676 Msa1404790:three_prime_UTR
GATTGCCGCACCAAATACCT+CGG 0.694787 tig0023091:+19279 None:intergenic
AAAATATTTCTAGGGCACTG+AGG 0.697500 tig0023091:+19076 None:intergenic
TTCGGAAAGAAATACTACGT+GGG 0.706299 tig0023091:-18161 Msa1404790:CDS
GATAATTCTGATGATCAACA+GGG 0.708450 tig0023091:-18602 Msa1404790:CDS
GTAATTGGTCATTATCAACA+AGG 0.716359 tig0023091:+18498 None:intergenic
TTTCGGAAAGAAATACTACG+TGG 0.732414 tig0023091:-18162 Msa1404790:CDS
AAGCACAACATTGCTGACTG+TGG 0.737708 tig0023091:-18200 Msa1404790:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTTTAATTTTATTTT+AGG + tig0023091:17477-17496 None:intergenic 0.0%
!!! ATTTTAATTTTATTTTAGGT+TGG + tig0023091:17473-17492 None:intergenic 10.0%
!! TAATAATAAAAATAGAAAAG+TGG + tig0023091:17819-17838 None:intergenic 10.0%
!!! ATTCTATTTTTTTGTATATT+TGG - tig0023091:18888-18907 Msa1404790:CDS 10.0%
!!! TTAATTTTAATTCATTTGAA+GGG + tig0023091:19213-19232 None:intergenic 10.0%
!!! ATTAATTTTAATTCATTTGA+AGG + tig0023091:19214-19233 None:intergenic 10.0%
!! TTCAAATGAATTAAAATTAA+TGG - tig0023091:19213-19232 Msa1404790:CDS 10.0%
!!! ATTAATTGATTTGATTGAAA+TGG - tig0023091:17905-17924 Msa1404790:CDS 15.0%
!!! CAAGAATTTTCATTTATAAA+AGG + tig0023091:17944-17963 None:intergenic 15.0%
!! TTTATAAATGAAAATTCTTG+TGG - tig0023091:17944-17963 Msa1404790:CDS 15.0%
!!! TGAATACAATATTTTACTAT+GGG - tig0023091:18260-18279 Msa1404790:CDS 15.0%
!! AAAATAGAATTAAGAAAATG+TGG + tig0023091:18878-18897 None:intergenic 15.0%
!! TTGGAGATTAAAACAAAAAT+AGG + tig0023091:17454-17473 None:intergenic 20.0%
!! TAATGAATTAGAGTAAGTTA+AGG - tig0023091:17506-17525 Msa1404790:three_prime_UTR 20.0%
!! ATTAATTATGAGTGTAACTA+AGG + tig0023091:17891-17910 None:intergenic 20.0%
!! TAATACTAGTAGTATATCTT+TGG - tig0023091:17969-17988 Msa1404790:CDS 20.0%
!!! AAACCTCAAATTGTTTTTAA+TGG - tig0023091:18015-18034 Msa1404790:CDS 20.0%
!! AAACCATTAAAAACAATTTG+AGG + tig0023091:18021-18040 None:intergenic 20.0%
!! TTTAAGTAATTATGCAGAAA+TGG + tig0023091:18215-18234 None:intergenic 20.0%
!!! GTGAATACAATATTTTACTA+TGG - tig0023091:18259-18278 Msa1404790:CDS 20.0%
!!! GAATACAATATTTTACTATG+GGG - tig0023091:18261-18280 Msa1404790:CDS 20.0%
!!! CTAGTATATTTTAGCATTTT+AGG - tig0023091:18527-18546 Msa1404790:CDS 20.0%
!!! TATATTTTAGCATTTTAGGT+AGG - tig0023091:18531-18550 Msa1404790:CDS 20.0%
!!! GTTTATAAAATGTTGGTTAT+AGG - tig0023091:18612-18631 Msa1404790:CDS 20.0%
!! TTTGGCTAAATAAAGTTTAA+AGG - tig0023091:18906-18925 Msa1404790:CDS 20.0%
!! TAAATAAAGTTTAAAGGAGA+AGG - tig0023091:18912-18931 Msa1404790:CDS 20.0%
!! ATCAAATATAGAGTTTATAG+TGG + tig0023091:20008-20027 None:intergenic 20.0%
!!! CATTTGTTTCTTTAAGTAAA+GGG + tig0023091:20887-20906 None:intergenic 20.0%
!!! TCATTTGTTTCTTTAAGTAA+AGG + tig0023091:20888-20907 None:intergenic 20.0%
!! ATATACATTCTTCTTTACTT+CGG + tig0023091:21175-21194 None:intergenic 20.0%
!! TTAAAATTTGTGATTAATGC+TGG - tig0023091:21471-21490 Msa1404790:CDS 20.0%
!! TTGTTCAATAATCAGTATTT+GGG - tig0023091:22079-22098 Msa1404790:intron 20.0%
!! TTAGTAGTATATGAACTTAT+CGG - tig0023091:22210-22229 Msa1404790:intron 20.0%
! AAAAAAGAAATGTCAGAAGT+GGG + tig0023091:17373-17392 None:intergenic 25.0%
! TAAAAAAGAAATGTCAGAAG+TGG + tig0023091:17374-17393 None:intergenic 25.0%
! TAGAGATTATCTATATGGAT+TGG + tig0023091:17596-17615 None:intergenic 25.0%
! TAGGATAGAGATTATCTATA+TGG + tig0023091:17601-17620 None:intergenic 25.0%
! AGCTTAATATGTTTCTTCAT+AGG - tig0023091:18361-18380 Msa1404790:CDS 25.0%
! AAACAAACATACTCTTTATG+AGG + tig0023091:18650-18669 None:intergenic 25.0%
!! TAAAGAGTATGTTTGTTTGA+AGG - tig0023091:18652-18671 Msa1404790:CDS 25.0%
! ATGAAAATGTTACATCTTCA+AGG + tig0023091:18703-18722 None:intergenic 25.0%
!! AGATGTAACATTTTCATGTT+TGG - tig0023091:18706-18725 Msa1404790:CDS 25.0%
! TAAGAAAATGTGGTAGAATA+AGG + tig0023091:18868-18887 None:intergenic 25.0%
!! TTGATTCAGAATTGATTCTT+AGG + tig0023091:19478-19497 None:intergenic 25.0%
! ATTTATCAATCTCAACATAG+TGG - tig0023091:19692-19711 Msa1404790:CDS 25.0%
!! CTTATTTCTCTTCACATTAT+TGG + tig0023091:20152-20171 None:intergenic 25.0%
! ATAATGTGAAGAGAAATAAG+AGG - tig0023091:20152-20171 Msa1404790:intron 25.0%
! TAATTAACAGTATATCCGTT+AGG + tig0023091:20373-20392 None:intergenic 25.0%
!! ATAATCTTCTTTTTGCAACT+TGG + tig0023091:20839-20858 None:intergenic 25.0%
! TAATCTAAATAGTCGCAAAA+TGG - tig0023091:21689-21708 Msa1404790:intron 25.0%
! AATCTAAATAGTCGCAAAAT+GGG - tig0023091:21690-21709 Msa1404790:intron 25.0%
! GTTGTTCAATAATCAGTATT+TGG - tig0023091:22078-22097 Msa1404790:intron 25.0%
!! ACAAATGAACATCTAAGATT+GGG + tig0023091:22111-22130 None:intergenic 25.0%
!! TACAAATGAACATCTAAGAT+TGG + tig0023091:22112-22131 None:intergenic 25.0%
! ATATTAAAGCACAGAAACTT+TGG - tig0023091:22152-22171 Msa1404790:intron 25.0%
! TATTAAAGCACAGAAACTTT+GGG - tig0023091:22153-22172 Msa1404790:intron 25.0%
!!! TTATTTTAATCTCTTCACCG+TGG - tig0023091:17394-17413 Msa1404790:three_prime_UTR 30.0%
!!! TATTTTAATCTCTTCACCGT+GGG - tig0023091:17395-17414 Msa1404790:three_prime_UTR 30.0%
!! ACAAAAATAGGCGCTATTTT+AGG + tig0023091:17442-17461 None:intergenic 30.0%
GGATAGATAGATAGATAAGA+CGG + tig0023091:17571-17590 None:intergenic 30.0%
!! GATTATCTATATGGATTGGA+GGG + tig0023091:17592-17611 None:intergenic 30.0%
!! AGATTATCTATATGGATTGG+AGG + tig0023091:17593-17612 None:intergenic 30.0%
ATGAATAGGAGAAAGAGATA+CGG + tig0023091:17663-17682 None:intergenic 30.0%
! TTCTCCTATTCATTGTGTTT+TGG - tig0023091:17670-17689 Msa1404790:three_prime_UTR 30.0%
! TCTCCTATTCATTGTGTTTT+GGG - tig0023091:17671-17690 Msa1404790:three_prime_UTR 30.0%
! ATCCCAAGAAGCATATTTAT+GGG + tig0023091:17731-17750 None:intergenic 30.0%
! AATCCCAAGAAGCATATTTA+TGG + tig0023091:17732-17751 None:intergenic 30.0%
TAAATATGCTTCTTGGGATT+TGG - tig0023091:17732-17751 Msa1404790:three_prime_UTR 30.0%
!!! GATGAAAGGTTTTAGAGATT+GGG - tig0023091:18067-18086 Msa1404790:CDS 30.0%
! AAAGTATTACTGCCTGATAA+CGG + tig0023091:18134-18153 None:intergenic 30.0%
TAGAGAACTATATATCAGCA+GGG + tig0023091:18322-18341 None:intergenic 30.0%
ACTTGACAACTAATCTCAAA+TGG + tig0023091:18390-18409 None:intergenic 30.0%
GGTTTAATGTTGTAAGCTAA+AGG - tig0023091:18479-18498 Msa1404790:CDS 30.0%
! CCAACATTTTATAAACAGCA+AGG + tig0023091:18608-18627 None:intergenic 30.0%
!! CCTTGCTGTTTATAAAATGT+TGG - tig0023091:18605-18624 Msa1404790:CDS 30.0%
AAATAAGTTTCTATTCCCAC+GGG + tig0023091:18812-18831 None:intergenic 30.0%
GAAATAAGTTTCTATTCCCA+CGG + tig0023091:18813-18832 None:intergenic 30.0%
TGGAAGTTAAAAGTAATCGA+TGG + tig0023091:18845-18864 None:intergenic 30.0%
!! AGAAAACCTCTTTACTTTTG+TGG + tig0023091:19405-19424 None:intergenic 30.0%
! ACATCGTTTTGTACTTTGAA+CGG - tig0023091:20218-20237 Msa1404790:intron 30.0%
AATACAGCAGTATATACATC+AGG - tig0023091:20423-20442 Msa1404790:intron 30.0%
ATCATCAATTCCACTTTGAT+TGG + tig0023091:20716-20735 None:intergenic 30.0%
!! TGGAATTGATGATGAAATTG+AGG - tig0023091:20723-20742 Msa1404790:intron 30.0%
TTACTTTCAGACAAAGAAGA+AGG - tig0023091:20751-20770 Msa1404790:intron 30.0%
! TTTCAAATTGGGATTTTGTC+AGG + tig0023091:20810-20829 None:intergenic 30.0%
! CTTGGACAACTTTTCAAATT+GGG + tig0023091:20821-20840 None:intergenic 30.0%
! ACTTGGACAACTTTTCAAAT+TGG + tig0023091:20822-20841 None:intergenic 30.0%
GTTGCAAAAAGAAGATTATC+TGG - tig0023091:20840-20859 Msa1404790:intron 30.0%
AGAAGATTATCTGGATGAAT+TGG - tig0023091:20849-20868 Msa1404790:intron 30.0%
TGATAATTCTGATGATCAAC+AGG - tig0023091:20969-20988 Msa1404790:intron 30.0%
GATAATTCTGATGATCAACA+GGG - tig0023091:20970-20989 Msa1404790:intron 30.0%
CAATCTGAATCAAAACTTAG+AGG + tig0023091:21033-21052 None:intergenic 30.0%
GTAATTGGTCATTATCAACA+AGG + tig0023091:21077-21096 None:intergenic 30.0%
ACAAATGCATAAGAATAAGC+AGG - tig0023091:21209-21228 Msa1404790:intron 30.0%
!! CAATTTTGTGTTGCTATGAA+CGG + tig0023091:21343-21362 None:intergenic 30.0%
! CTTAAGTTGTCATTTCTGAT+GGG + tig0023091:21567-21586 None:intergenic 30.0%
GTAATTTACAATCTGAGTTC+AGG - tig0023091:21634-21653 Msa1404790:intron 30.0%
ATCTAAATAGTCGCAAAATG+GGG - tig0023091:21691-21710 Msa1404790:intron 30.0%
! TGCAGTTTTCTCAATTTTGA+AGG - tig0023091:21764-21783 Msa1404790:intron 30.0%
! TAGAAAGGAAATCTAGAACA+TGG - tig0023091:21797-21816 Msa1404790:intron 30.0%
!!! AGACTCATCTATTTTGATCA+GGG - tig0023091:21863-21882 Msa1404790:intron 30.0%
ATCAGGGAAAAGATGAAATT+TGG - tig0023091:21879-21898 Msa1404790:intron 30.0%
! ATACTTCAGATTCCAGTTTT+TGG - tig0023091:22007-22026 Msa1404790:intron 30.0%
! TTTGGAAGTCTCTTTAGTTT+AGG - tig0023091:22025-22044 Msa1404790:intron 30.0%
ATTGAACAACAATGCACAAA+AGG + tig0023091:22068-22087 None:intergenic 30.0%
! CAAATGAACATCTAAGATTG+GGG + tig0023091:22110-22129 None:intergenic 30.0%
! GTGTTAAATGAAAGTGCAAA+TGG - tig0023091:22261-22280 Msa1404790:CDS 30.0%
!!! GCTATTTTAGGTTAGGGTTA+TGG + tig0023091:17430-17449 None:intergenic 35.0%
!!! ATAGGCGCTATTTTAGGTTA+GGG + tig0023091:17436-17455 None:intergenic 35.0%
!!! AATAGGCGCTATTTTAGGTT+AGG + tig0023091:17437-17456 None:intergenic 35.0%
ATGTTCCTTTCTCCCAAATT+AGG - tig0023091:17701-17720 Msa1404790:three_prime_UTR 35.0%
TGTTCCTTTCTCCCAAATTA+GGG - tig0023091:17702-17721 Msa1404790:three_prime_UTR 35.0%
TTTATGGGGAACCCTAATTT+GGG + tig0023091:17716-17735 None:intergenic 35.0%
ATTTATGGGGAACCCTAATT+TGG + tig0023091:17717-17736 None:intergenic 35.0%
TTCCCCATAAATATGCTTCT+TGG - tig0023091:17725-17744 Msa1404790:three_prime_UTR 35.0%
TCCCCATAAATATGCTTCTT+GGG - tig0023091:17726-17745 Msa1404790:three_prime_UTR 35.0%
! TCCCAAGAAGCATATTTATG+GGG + tig0023091:17730-17749 None:intergenic 35.0%
! TTCTTTTCATGTGTTGCAGT+AGG - tig0023091:18041-18060 Msa1404790:CDS 35.0%
!!! GGATGAAAGGTTTTAGAGAT+TGG - tig0023091:18066-18085 Msa1404790:CDS 35.0%
CAATGAATTGGACAATAGCT+GGG + tig0023091:18099-18118 None:intergenic 35.0%
TCAATGAATTGGACAATAGC+TGG + tig0023091:18100-18119 None:intergenic 35.0%
CATTAAGATCTTCACTTGGA+CGG + tig0023091:18169-18188 None:intergenic 35.0%
TGGTCATTAAGATCTTCACT+TGG + tig0023091:18173-18192 None:intergenic 35.0%
AGTGAAGATCTTAATGACCA+AGG - tig0023091:18173-18192 Msa1404790:CDS 35.0%
ATGCAGAAATGGTAAAACCA+GGG + tig0023091:18204-18223 None:intergenic 35.0%
TATGCAGAAATGGTAAAACC+AGG + tig0023091:18205-18224 None:intergenic 35.0%
CTAGAGAACTATATATCAGC+AGG + tig0023091:18323-18342 None:intergenic 35.0%
TGACAACTAATCTCAAATGG+TGG + tig0023091:18387-18406 None:intergenic 35.0%
! TGTCAAGTATTGCAATGCTT+AGG - tig0023091:18402-18421 Msa1404790:CDS 35.0%
GCAAGGCTCTACTTATAATT+GGG + tig0023091:18591-18610 None:intergenic 35.0%
AGCAAGGCTCTACTTATAAT+TGG + tig0023091:18592-18611 None:intergenic 35.0%
GAAAATGTGGTAGAATAAGG+TGG + tig0023091:18865-18884 None:intergenic 35.0%
AGAGAGAAGAAATGAACATG+TGG - tig0023091:18957-18976 Msa1404790:CDS 35.0%
TGAATGAATGGATGAAGAGA+AGG - tig0023091:19124-19143 Msa1404790:CDS 35.0%
GAATGAATGGATGAAGAGAA+GGG - tig0023091:19125-19144 Msa1404790:CDS 35.0%
! TGTGTTGTTGAGAAAGGTTT+AGG - tig0023091:19157-19176 Msa1404790:CDS 35.0%
! GTGTTGTTGAGAAAGGTTTA+GGG - tig0023091:19158-19177 Msa1404790:CDS 35.0%
AAAATGAAAAGCGATTGGTG+CGG + tig0023091:19249-19268 None:intergenic 35.0%
GTGCAAAAATGAAAAGCGAT+TGG + tig0023091:19254-19273 None:intergenic 35.0%
AGGAATAGGATCATATTCCT+AGG + tig0023091:19371-19390 None:intergenic 35.0%
TGGCATTTGTTCAAAGGAAT+AGG + tig0023091:19385-19404 None:intergenic 35.0%
! CTTTTGTGGCATTTGTTCAA+AGG + tig0023091:19391-19410 None:intergenic 35.0%
CAAATGCCACAAAAGTAAAG+AGG - tig0023091:19396-19415 Msa1404790:CDS 35.0%
! TCAGAATTGATTCTTAGGCA+TGG + tig0023091:19473-19492 None:intergenic 35.0%
! CAATCTCAACATAGTGGAAA+TGG - tig0023091:19698-19717 Msa1404790:CDS 35.0%
! AACATAGTGGAAATGGAAGA+CGG - tig0023091:19705-19724 Msa1404790:CDS 35.0%
GAAGGCGGAAAAATTTAACT+TGG + tig0023091:19760-19779 None:intergenic 35.0%
!! ATGTTGGTTTGCTATTTCTC+GGG + tig0023091:19909-19928 None:intergenic 35.0%
!! CATGTTGGTTTGCTATTTCT+CGG + tig0023091:19910-19929 None:intergenic 35.0%
AGAAATAGCAAACCAACATG+AGG - tig0023091:19910-19929 Msa1404790:CDS 35.0%
ATACTTGTCCTTGGTAAAAC+AGG - tig0023091:19968-19987 Msa1404790:CDS 35.0%
CACAATTTCTTGGATGCAAT+CGG + tig0023091:20068-20087 None:intergenic 35.0%
GATTGCATCCAAGAAATTGT+GGG - tig0023091:20067-20086 Msa1404790:intron 35.0%
ATAACGTTTATTGATACCCC+TGG - tig0023091:20109-20128 Msa1404790:intron 35.0%
TTCACATTATTGGTAGAGGA+AGG + tig0023091:20142-20161 None:intergenic 35.0%
TCTCTTCACATTATTGGTAG+AGG + tig0023091:20146-20165 None:intergenic 35.0%
TCAAAGTACAAAACGATGTC+TGG + tig0023091:20217-20236 None:intergenic 35.0%
CGGTTATGAGTTTCAAAAGT+GGG + tig0023091:20276-20295 None:intergenic 35.0%
TCGGTTATGAGTTTCAAAAG+TGG + tig0023091:20277-20296 None:intergenic 35.0%
!!! ACTTTTGAAACTCATAACCG+AGG - tig0023091:20276-20295 Msa1404790:intron 35.0%
! AAACTCATAACCGAGGTATT+TGG - tig0023091:20283-20302 Msa1404790:intron 35.0%
ATCAGGCAATGTTAGATTCA+AGG - tig0023091:20440-20459 Msa1404790:intron 35.0%
!! AAAATATTTCTAGGGCACTG+AGG + tig0023091:20499-20518 None:intergenic 35.0%
! TCAGTGCCCTAGAAATATTT+TGG - tig0023091:20498-20517 Msa1404790:intron 35.0%
! CAGTGCCCTAGAAATATTTT+GGG - tig0023091:20499-20518 Msa1404790:intron 35.0%
! AGTGCCCTAGAAATATTTTG+GGG - tig0023091:20500-20519 Msa1404790:intron 35.0%
! TCTCCCCCAAAATATTTCTA+GGG + tig0023091:20507-20526 None:intergenic 35.0%
TTCTCCCCCAAAATATTTCT+AGG + tig0023091:20508-20527 None:intergenic 35.0%
TGCATTTGTACCAAAGTTCT+AGG - tig0023091:20574-20593 Msa1404790:CDS 35.0%
ATTTACGTCACCTAGAACTT+TGG + tig0023091:20587-20606 None:intergenic 35.0%
!! ACCATTCTGAAACTTAAGGA+GGG + tig0023091:20611-20630 None:intergenic 35.0%
TTTCAGAATGGTGTGGAATT+AGG - tig0023091:20619-20638 Msa1404790:intron 35.0%
ATCTGGATGAATTGGAATAC+AGG - tig0023091:20857-20876 Msa1404790:intron 35.0%
TCTGGATGAATTGGAATACA+GGG - tig0023091:20858-20877 Msa1404790:intron 35.0%
!! GGGTTTTGATGGTATAAACT+TGG - tig0023091:21140-21159 Msa1404790:intron 35.0%
AATGTATATGCCTCTGTTGT+GGG - tig0023091:21186-21205 Msa1404790:intron 35.0%
!! ATCTGTTGGTGGTAAAGATA+TGG - tig0023091:21311-21330 Msa1404790:intron 35.0%
GGTGTTTCTTTGACATCTTT+CGG - tig0023091:21393-21412 Msa1404790:intron 35.0%
TTTCGGAAAGAAATACTACG+TGG - tig0023091:21410-21429 Msa1404790:CDS 35.0%
TTCGGAAAGAAATACTACGT+GGG - tig0023091:21411-21430 Msa1404790:CDS 35.0%
CTTGAGGATACTTTGCTAAT+CGG - tig0023091:21441-21460 Msa1404790:CDS 35.0%
!!! AGTTTTGAAGCTTGTTTACG+AGG - tig0023091:21531-21550 Msa1404790:intron 35.0%
!!! GTTTTGAAGCTTGTTTACGA+GGG - tig0023091:21532-21551 Msa1404790:intron 35.0%
!!! TTTTGAAGCTTGTTTACGAG+GGG - tig0023091:21533-21552 Msa1404790:intron 35.0%
! GCTTAAGTTGTCATTTCTGA+TGG + tig0023091:21568-21587 None:intergenic 35.0%
CCTCTCTTTCAATAAAGAGA+CGG - tig0023091:21602-21621 Msa1404790:intron 35.0%
TGAGCATTTACAAATTGCCT+TGG - tig0023091:21740-21759 Msa1404790:intron 35.0%
AATTGAGAAAACTGCAACCA+AGG + tig0023091:21760-21779 None:intergenic 35.0%
GAAGGTTCTGTTACATAGAA+AGG - tig0023091:21782-21801 Msa1404790:intron 35.0%
GAAAGTCCTCGAAAGATATT+AGG - tig0023091:21824-21843 Msa1404790:intron 35.0%
ACAGAACCTAATATCTTTCG+AGG + tig0023091:21833-21852 None:intergenic 35.0%
!!! GAGACTCATCTATTTTGATC+AGG - tig0023091:21862-21881 Msa1404790:intron 35.0%
!! ATTTCGTTTTCCCTCTGAAA+CGG + tig0023091:21944-21963 None:intergenic 35.0%
CTAAAGAGACTTCCAAAAAC+TGG + tig0023091:22022-22041 None:intergenic 35.0%
!! TATGAACTTATCGGTTCAAC+AGG - tig0023091:22219-22238 Msa1404790:intron 35.0%
! AAGTTCTGGTCTTCGAAAGA+GGG - tig0023091:17334-17353 Msa1404790:three_prime_UTR 40.0%
GGAAGAAAACGAAAATGCGT+AGG + tig0023091:17620-17639 None:intergenic 40.0%
AAAGAGATACGGAGAGAGAT+AGG + tig0023091:17652-17671 None:intergenic 40.0%
TGGCCCAAAACACAATGAAT+AGG + tig0023091:17677-17696 None:intergenic 40.0%
TGGGAGAAAGGAACATGTAA+TGG + tig0023091:17697-17716 None:intergenic 40.0%
! GGCGCAGACATTGATAATTT+GGG + tig0023091:17771-17790 None:intergenic 40.0%
! AGGCGCAGACATTGATAATT+TGG + tig0023091:17772-17791 None:intergenic 40.0%
GCAAGTAGTTCACCTAACAT+AGG + tig0023091:17792-17811 None:intergenic 40.0%
TTTCATGTGTTGCAGTAGGT+AGG - tig0023091:18045-18064 Msa1404790:CDS 40.0%
!! CAATGCTTAGGCTTTGTTCT+TGG - tig0023091:18414-18433 Msa1404790:CDS 40.0%
!! CTTAGGCTTTGTTCTTGGAA+GGG - tig0023091:18419-18438 Msa1404790:CDS 40.0%
CTCTACTTATAATTGGGAGG+GGG + tig0023091:18585-18604 None:intergenic 40.0%
GCTCTACTTATAATTGGGAG+GGG + tig0023091:18586-18605 None:intergenic 40.0%
GGCTCTACTTATAATTGGGA+GGG + tig0023091:18587-18606 None:intergenic 40.0%
AGGCTCTACTTATAATTGGG+AGG + tig0023091:18588-18607 None:intergenic 40.0%
! TGAAGGCATGCAATAATTCC+CGG - tig0023091:18669-18688 Msa1404790:CDS 40.0%
ATCTTCAAGGTCAGTATTCC+GGG + tig0023091:18690-18709 None:intergenic 40.0%
CATCTTCAAGGTCAGTATTC+CGG + tig0023091:18691-18710 None:intergenic 40.0%
CGGGAAGTTAGGGAAAATAT+AGG + tig0023091:18793-18812 None:intergenic 40.0%
! ATATTTTCCCTAACTTCCCG+TGG - tig0023091:18793-18812 Msa1404790:CDS 40.0%
! TATTTTCCCTAACTTCCCGT+GGG - tig0023091:18794-18813 Msa1404790:CDS 40.0%
TTGAGGCTGCATTGAATGAA+TGG - tig0023091:19112-19131 Msa1404790:CDS 40.0%
TGCTTCGCTGTTATCAATAG+CGG + tig0023091:19346-19365 None:intergenic 40.0%
GAAACTATCAACGCTTTAGC+TGG + tig0023091:19451-19470 None:intergenic 40.0%
GAGTTCTGTCTAAATTGTGC+AGG + tig0023091:19542-19561 None:intergenic 40.0%
TAGAACTGCTCTGATTACTC+TGG + tig0023091:19646-19665 None:intergenic 40.0%
! CCAAGAGGTTTTCTTTTGAC+TGG + tig0023091:19796-19815 None:intergenic 40.0%
CCAGTCAAAAGAAAACCTCT+TGG - tig0023091:19793-19812 Msa1404790:CDS 40.0%
TGGTCGCAAAGGTTCTTTAT+CGG - tig0023091:19813-19832 Msa1404790:CDS 40.0%
! TTTGATTCGTGCTGAGGAAA+CGG - tig0023091:19850-19869 Msa1404790:CDS 40.0%
AGAGTTAACCTTAGTAGCAG+TGG - tig0023091:19881-19900 Msa1404790:CDS 40.0%
! TTCCAACTCCTGTTTTACCA+AGG + tig0023091:19979-19998 None:intergenic 40.0%
!! AGGTTGAAAAGCATTAGTCG+TGG + tig0023091:20041-20060 None:intergenic 40.0%
CGATTGCATCCAAGAAATTG+TGG - tig0023091:20066-20085 Msa1404790:intron 40.0%
TGACAGTTCCCACAATTTCT+TGG + tig0023091:20078-20097 None:intergenic 40.0%
GAAATTGTGGGAACTGTCAA+CGG - tig0023091:20079-20098 Msa1404790:intron 40.0%
AAATTGTGGGAACTGTCAAC+GGG - tig0023091:20080-20099 Msa1404790:intron 40.0%
AAGTACAAAACGATGTCTGG+AGG + tig0023091:20214-20233 None:intergenic 40.0%
TCATCCTCATCTATTCCAGA+AGG - tig0023091:20346-20365 Msa1404790:intron 40.0%
TCTATTCCAGAAGGACCTAA+CGG - tig0023091:20355-20374 Msa1404790:intron 40.0%
! GGTTCTCAACAAAAAGTGCA+GGG + tig0023091:20474-20493 None:intergenic 40.0%
! TGGTTCTCAACAAAAAGTGC+AGG + tig0023091:20475-20494 None:intergenic 40.0%
!! GTGCCCTAGAAATATTTTGG+GGG - tig0023091:20501-20520 Msa1404790:intron 40.0%
! GAAAATCCTTCCTAATGGAC+AGG - tig0023091:20525-20544 Msa1404790:CDS 40.0%
TCCCTCCTTAAGTTTCAGAA+TGG - tig0023091:20607-20626 Msa1404790:intron 40.0%
!! CACCATTCTGAAACTTAAGG+AGG + tig0023091:20612-20631 None:intergenic 40.0%
!! CCACACCATTCTGAAACTTA+AGG + tig0023091:20615-20634 None:intergenic 40.0%
CCTTAAGTTTCAGAATGGTG+TGG - tig0023091:20612-20631 Msa1404790:intron 40.0%
TTTGATTGGATACAGAGCGA+TGG + tig0023091:20702-20721 None:intergenic 40.0%
TTTGTCAGGATTCGTATGGA+TGG + tig0023091:20796-20815 None:intergenic 40.0%
! GGATTTTGTCAGGATTCGTA+TGG + tig0023091:20800-20819 None:intergenic 40.0%
ACCTGTTCAGTTACCAGATA+TGG - tig0023091:21002-21021 Msa1404790:intron 40.0%
GAACAGGTCTCACAAGTAAT+TGG + tig0023091:21092-21111 None:intergenic 40.0%
GAATGTATATGCCTCTGTTG+TGG - tig0023091:21185-21204 Msa1404790:intron 40.0%
ATAGAGTAACTAGGACCCAT+CGG + tig0023091:21276-21295 None:intergenic 40.0%
ATGGGTCCTAGTTACTCTAT+CGG - tig0023091:21276-21295 Msa1404790:intron 40.0%
TCAACACCGATAGAGTAACT+AGG + tig0023091:21285-21304 None:intergenic 40.0%
CCGTCTCTTTATTGAAAGAG+AGG + tig0023091:21605-21624 None:intergenic 40.0%
! AATAAAGAGACGGTGTTGAG+TGG - tig0023091:21612-21631 Msa1404790:intron 40.0%
! TAGCACTAACAGTTGCTTTC+AGG + tig0023091:21671-21690 None:intergenic 40.0%
! ATTTGGTGAAGCATTCTGCA+AGG - tig0023091:21896-21915 Msa1404790:intron 40.0%
!! TTTCCCTCTGAAACGGAAAA+TGG + tig0023091:21937-21956 None:intergenic 40.0%
! GAAGTCTCTTTAGTTTAGGC+TGG - tig0023091:22029-22048 Msa1404790:intron 40.0%
! CAAGTTCTGGTCTTCGAAAG+AGG - tig0023091:17333-17352 Msa1404790:three_prime_UTR 45.0%
TTTAATCTCTTCACCGTGGG+TGG - tig0023091:17398-17417 Msa1404790:three_prime_UTR 45.0%
TTAATCTCTTCACCGTGGGT+GGG - tig0023091:17399-17418 Msa1404790:three_prime_UTR 45.0%
TATCGTGTTCTCTCCTTCGT+TGG - tig0023091:17538-17557 Msa1404790:three_prime_UTR 45.0%
GAGAGAGATAGGATTCGAGA+TGG + tig0023091:17641-17660 None:intergenic 45.0%
GGAACCCTAATTTGGGAGAA+AGG + tig0023091:17709-17728 None:intergenic 45.0%
TCAATGTCTGCGCCTATGTT+AGG - tig0023091:17777-17796 Msa1404790:exon 45.0%
CAGCGAACGAAACGAATTAG+AGG + tig0023091:17857-17876 None:intergenic 45.0%
GTTGCAGTAGGTAGGATGAA+AGG - tig0023091:18053-18072 Msa1404790:CDS 45.0%
CGTTGGCGAGATCAATGAAT+TGG + tig0023091:18111-18130 None:intergenic 45.0%
TAATGACCAAGGTACAACCC+TGG - tig0023091:18184-18203 Msa1404790:CDS 45.0%
GTAAAACCAGGGTTGTACCT+TGG + tig0023091:18193-18212 None:intergenic 45.0%
!! GCTTAGGCTTTGTTCTTGGA+AGG - tig0023091:18418-18437 Msa1404790:CDS 45.0%
GGGGGTGAAAGATTGTAACA+TGG + tig0023091:18567-18586 None:intergenic 45.0%
TCTATTCCCACGGGAAGTTA+GGG + tig0023091:18803-18822 None:intergenic 45.0%
TTCTATTCCCACGGGAAGTT+AGG + tig0023091:18804-18823 None:intergenic 45.0%
CTGTGTTGTGATGCAGAGAA+GGG - tig0023091:18980-18999 Msa1404790:CDS 45.0%
GTTGATGCAATCGCTCAATC+AGG - tig0023091:19077-19096 Msa1404790:CDS 45.0%
ATGCAATCGCTCAATCAGGA+AGG - tig0023091:19081-19100 Msa1404790:CDS 45.0%
TCAGGAAGGAGTTAGAGTTG+AGG - tig0023091:19095-19114 Msa1404790:CDS 45.0%
! TGAGGCTGTGTTGTTGAGAA+AGG - tig0023091:19151-19170 Msa1404790:CDS 45.0%
! GATAACAGCGAAGCATTCCT+AGG - tig0023091:19351-19370 Msa1404790:CDS 45.0%
TTTGATGTGCCAGACGGAAT+CGG + tig0023091:19611-19630 None:intergenic 45.0%
GAAGAGTTTGATGTGCCAGA+CGG + tig0023091:19617-19636 None:intergenic 45.0%
ACTGCTCTGATTACTCTGGT+TGG + tig0023091:19642-19661 None:intergenic 45.0%
TAGTGGAAATGGAAGACGGA+AGG - tig0023091:19709-19728 Msa1404790:CDS 45.0%
TGGAAGACGGAAGGATACTT+TGG - tig0023091:19718-19737 Msa1404790:CDS 45.0%
ACGGAAGGATACTTTGGCAA+AGG - tig0023091:19724-19743 Msa1404790:CDS 45.0%
GGATACTTTGGCAAAGGTTG+AGG - tig0023091:19730-19749 Msa1404790:CDS 45.0%
! AATTTTTCCGCCTTCTCCAG+CGG - tig0023091:19765-19784 Msa1404790:CDS 45.0%
AGAAAACCTCTTGGTCGCAA+AGG - tig0023091:19802-19821 Msa1404790:CDS 45.0%
AAAGAACCTTTGCGACCAAG+AGG + tig0023091:19811-19830 None:intergenic 45.0%
TCCTGCAGAATACTTGTCCT+TGG - tig0023091:19959-19978 Msa1404790:CDS 45.0%
ACCAAGGACAAGTATTCTGC+AGG + tig0023091:19963-19982 None:intergenic 45.0%
GTCCTTGGTAAAACAGGAGT+TGG - tig0023091:19974-19993 Msa1404790:CDS 45.0%
CATTATTGGTAGAGGAAGGC+AGG + tig0023091:20138-20157 None:intergenic 45.0%
CGGCTTGATCTGATCAATTC+TGG - tig0023091:20238-20257 Msa1404790:intron 45.0%
! CATAACCGAGGTATTTGGTG+CGG - tig0023091:20288-20307 Msa1404790:intron 45.0%
!! AGGTCCTTCTGGAATAGATG+AGG + tig0023091:20353-20372 None:intergenic 45.0%
GTATATCCGTTAGGTCCTTC+TGG + tig0023091:20364-20383 None:intergenic 45.0%
!! TATTTCTAGGGCACTGAGGA+TGG + tig0023091:20495-20514 None:intergenic 45.0%
GGGGAGAAAATCCTTCCTAA+TGG - tig0023091:20520-20539 Msa1404790:intron 45.0%
! TCCTTCCTAATGGACAGGTT+TGG - tig0023091:20530-20549 Msa1404790:CDS 45.0%
TCCAAACCTGTCCATTAGGA+AGG + tig0023091:20534-20553 None:intergenic 45.0%
GATCTCCAAACCTGTCCATT+AGG + tig0023091:20538-20557 None:intergenic 45.0%
TAACAGGGACGAAAGGAGAT+GGG + tig0023091:20677-20696 None:intergenic 45.0%
CGCTCTGTATCCAATCAAAG+TGG - tig0023091:20703-20722 Msa1404790:intron 45.0%
GTAACTTCTCCTTGCGTCTA+CGG + tig0023091:20921-20940 None:intergenic 45.0%
TCTGGTAACTGAACAGGTTC+TGG + tig0023091:21000-21019 None:intergenic 45.0%
GCCATATCTGGTAACTGAAC+AGG + tig0023091:21006-21025 None:intergenic 45.0%
CTTAGAGGAACAGCCATATC+TGG + tig0023091:21018-21037 None:intergenic 45.0%
GGTCATTATCAACAAGGCAG+CGG + tig0023091:21071-21090 None:intergenic 45.0%
TGTTCTTGATCCCCAAGGAT+GGG - tig0023091:21107-21126 Msa1404790:intron 45.0%
!! GATCACGATGTGGGTTTTGA+TGG - tig0023091:21129-21148 Msa1404790:intron 45.0%
ATGCATTTGTCCCACAACAG+AGG + tig0023091:21199-21218 None:intergenic 45.0%
!! GGTGTTGACGTTCAATCTGT+TGG - tig0023091:21297-21316 Msa1404790:intron 45.0%
GTTGACGTTCAATCTGTTGG+TGG - tig0023091:21300-21319 Msa1404790:intron 45.0%
! AAGCACAACATTGCTGACTG+TGG - tig0023091:21372-21391 Msa1404790:intron 45.0%
TGTGATTAATGCTGGCCGTA+TGG - tig0023091:21479-21498 Msa1404790:CDS 45.0%
ATTAATGCTGGCCGTATGGA+AGG - tig0023091:21483-21502 Msa1404790:CDS 45.0%
AAGAGAGGACTGTCATTGTC+AGG + tig0023091:21590-21609 None:intergenic 45.0%
TCTGCAAGGATGCAGAGATA+TGG - tig0023091:21910-21929 Msa1404790:intron 45.0%
! TGGACCATTTTCCGTTTCAG+AGG - tig0023091:21930-21949 Msa1404790:intron 45.0%
! GGACCATTTTCCGTTTCAGA+GGG - tig0023091:21931-21950 Msa1404790:intron 45.0%
!!! TTTAAATTATTAATTTTAGT+TGG - tig0023091:18458-18477 Msa1404790:CDS 5.0%
CGAAGACCAGAACTTGAGTC+TGG + tig0023091:17329-17348 None:intergenic 50.0%
GTTATGGTATGTCCCACCCA+CGG + tig0023091:17414-17433 None:intergenic 50.0%
AGACGGAAAGAGACCAACGA+AGG + tig0023091:17554-17573 None:intergenic 50.0%
!! TTACTGCCTGATAACGGCGT+TGG + tig0023091:18128-18147 None:intergenic 50.0%
GCTGTGTTGTGATGCAGAGA+AGG - tig0023091:18979-18998 Msa1404790:CDS 50.0%
CTCTTCATCGCAACACAGCT+GGG + tig0023091:19035-19054 None:intergenic 50.0%
TCTCTTCATCGCAACACAGC+TGG + tig0023091:19036-19055 None:intergenic 50.0%
GCTGTGTTGCGATGAAGAGA+AGG - tig0023091:19036-19055 Msa1404790:CDS 50.0%
GGATGAAGAGAAGGGAGATG+AGG - tig0023091:19133-19152 Msa1404790:CDS 50.0%
! ATTTTTGCACCGCTCCAACG+TGG - tig0023091:19264-19283 Msa1404790:CDS 50.0%
TTATCAATAGCGGCTGGTGG+TGG + tig0023091:19336-19355 None:intergenic 50.0%
CTGTTATCAATAGCGGCTGG+TGG + tig0023091:19339-19358 None:intergenic 50.0%
TCGCTGTTATCAATAGCGGC+TGG + tig0023091:19342-19361 None:intergenic 50.0%
!! TGCATCTGAAGCTTGCTGCA+AGG + tig0023091:19669-19688 None:intergenic 50.0%
GGTTCTTTATCGGATGCACC+TGG - tig0023091:19823-19842 Msa1404790:CDS 50.0%
CAGCACGAATCAAAGTTGCC+AGG + tig0023091:19844-19863 None:intergenic 50.0%
! GGCAACTTTGATTCGTGCTG+AGG - tig0023091:19844-19863 Msa1404790:CDS 50.0%
CTGCAGGAGAAGTCCAATTG+AGG + tig0023091:19947-19966 None:intergenic 50.0%
TCTTGGATGCAATCGGTAGC+AGG + tig0023091:20061-20080 None:intergenic 50.0%
TAGAGGAAGGCAGGAAACCA+GGG + tig0023091:20129-20148 None:intergenic 50.0%
GATTGCCGCACCAAATACCT+CGG + tig0023091:20296-20315 None:intergenic 50.0%
!! AGGTATTTGGTGCGGCAATC+TGG - tig0023091:20296-20315 Msa1404790:intron 50.0%
AACAGGGACGAAAGGAGATG+GGG + tig0023091:20676-20695 None:intergenic 50.0%
GTAACAGGGACGAAAGGAGA+TGG + tig0023091:20678-20697 None:intergenic 50.0%
TACAGAGCGATGGCGTAACA+GGG + tig0023091:20692-20711 None:intergenic 50.0%
ATACAGAGCGATGGCGTAAC+AGG + tig0023091:20693-20712 None:intergenic 50.0%
!! AGAAGAGTACCGTAGACGCA+AGG - tig0023091:20909-20928 Msa1404790:intron 50.0%
! GGTAACTGAACAGGTTCTGG+AGG + tig0023091:20997-21016 None:intergenic 50.0%
AGACCTGTTCTTGATCCCCA+AGG - tig0023091:21102-21121 Msa1404790:intron 50.0%
CATCCTTGGGGATCAAGAAC+AGG + tig0023091:21108-21127 None:intergenic 50.0%
CTGTTCTTGATCCCCAAGGA+TGG - tig0023091:21106-21125 Msa1404790:intron 50.0%
ACATCGTGATCCCATCCTTG+GGG + tig0023091:21120-21139 None:intergenic 50.0%
CACATCGTGATCCCATCCTT+GGG + tig0023091:21121-21140 None:intergenic 50.0%
CAAGGATGGGATCACGATGT+GGG - tig0023091:21120-21139 Msa1404790:intron 50.0%
TGCAGCCTATGTCAATCCGA+TGG - tig0023091:21257-21276 Msa1404790:intron 50.0%
GCAGCCTATGTCAATCCGAT+GGG - tig0023091:21258-21277 Msa1404790:intron 50.0%
AGGACCCATCGGATTGACAT+AGG + tig0023091:21265-21284 None:intergenic 50.0%
CTACGTGGGTGCAAAACTTG+AGG - tig0023091:21425-21444 Msa1404790:CDS 50.0%
CTTGTCCCTGACCTTCCATA+CGG + tig0023091:21497-21516 None:intergenic 50.0%
TATGGAAGGTCAGGGACAAG+TGG - tig0023091:21497-21516 Msa1404790:CDS 50.0%
! AAGGCGCCAGACTCAAGTTC+TGG - tig0023091:17320-17339 Msa1404790:three_prime_UTR 55.0%
! TGGTCTTCGAAAGAGGGCGT+GGG - tig0023091:17340-17359 Msa1404790:three_prime_UTR 55.0%
ATCTCGCCAACGCCGTTATC+AGG - tig0023091:18119-18138 Msa1404790:CDS 55.0%
!! GTAGCATTGCCGATTCCGTC+TGG - tig0023091:19599-19618 Msa1404790:CDS 55.0%
GCAAACCAACATGAGGCAGC+TGG - tig0023091:19917-19936 Msa1404790:CDS 55.0%
GCATACCAGCTGCCTCATGT+TGG + tig0023091:19925-19944 None:intergenic 55.0%
GGCAGCTGGTATGCCTCAAT+TGG - tig0023091:19931-19950 Msa1404790:CDS 55.0%
AGAGGAAGGCAGGAAACCAG+GGG + tig0023091:20128-20147 None:intergenic 55.0%
GTAGAGGAAGGCAGGAAACC+AGG + tig0023091:20130-20149 None:intergenic 55.0%
! GGAACTCGGGCACTGTTTGT+CGG + tig0023091:20646-20665 None:intergenic 55.0%
ATGGGGCAGAGAAGGAACTC+GGG + tig0023091:20659-20678 None:intergenic 55.0%
GATGGGGCAGAGAAGGAACT+CGG + tig0023091:20660-20679 None:intergenic 55.0%
GAAAGGAGATGGGGCAGAGA+AGG + tig0023091:20667-20686 None:intergenic 55.0%
GATGGCGTAACAGGGACGAA+AGG + tig0023091:20684-20703 None:intergenic 55.0%
CCACATCGTGATCCCATCCT+TGG + tig0023091:21122-21141 None:intergenic 55.0%
CCAAGGATGGGATCACGATG+TGG - tig0023091:21119-21138 Msa1404790:intron 55.0%
GTCTGGCGCCTTAGACCACT+CGG + tig0023091:17312-17331 None:intergenic 60.0%
! CTGGTCTTCGAAAGAGGGCG+TGG - tig0023091:17339-17358 Msa1404790:three_prime_UTR 60.0%
!! CTTTTGACTGGCCAAGCCGC+TGG + tig0023091:19784-19803 None:intergenic 60.0%
CTCGGGCTCCACTGCTACTA+AGG + tig0023091:19892-19911 None:intergenic 60.0%
TGCTGGCCGTATGGAAGGTC+AGG - tig0023091:21488-21507 Msa1404790:CDS 60.0%
GCTGGCCGTATGGAAGGTCA+GGG - tig0023091:21489-21508 Msa1404790:CDS 60.0%
TTGCACCGCTCCAACGTGGC+TGG - tig0023091:19268-19287 Msa1404790:CDS 65.0%
TGCACCGCTCCAACGTGGCT+GGG - tig0023091:19269-19288 Msa1404790:CDS 65.0%
CACTCCCAGCCACGTTGGAG+CGG + tig0023091:19276-19295 None:intergenic 65.0%
TCCAACGTGGCTGGGAGTGG+TGG - tig0023091:19277-19296 Msa1404790:CDS 65.0%
TGGTGGCTGCTACAGCGGTG+CGG + tig0023091:19319-19338 None:intergenic 65.0%
!! GCTGGTGGTGGCTGCTACAG+CGG + tig0023091:19324-19343 None:intergenic 65.0%
TTCCGCCTTCTCCAGCGGCT+TGG - tig0023091:19770-19789 Msa1404790:CDS 65.0%
ACTGGCCAAGCCGCTGGAGA+AGG + tig0023091:19778-19797 None:intergenic 65.0%
GGTCAGGGACAAGTGGCGCA+CGG - tig0023091:21504-21523 Msa1404790:CDS 65.0%
CGCTCCAACGTGGCTGGGAG+TGG - tig0023091:19274-19293 Msa1404790:CDS 70.0%
GCCACCACTCCCAGCCACGT+TGG + tig0023091:19281-19300 None:intergenic 70.0%
GGCCAAGCCGCTGGAGAAGG+CGG + tig0023091:19775-19794 None:intergenic 70.0%
CAGGGACAAGTGGCGCACGG+TGG - tig0023091:21507-21526 Msa1404790:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0023091 gene 17305 22289 17305 ID=Msa1404790;Name=Msa1404790
tig0023091 mRNA 17305 22289 17305 ID=Msa1404790-mRNA-1;Parent=Msa1404790;Name=Msa1404790-mRNA-1;_AED=0.12;_eAED=0.14;_QI=0|0|0.5|0.75|1|1|4|477|825
tig0023091 exon 17305 20009 17305 ID=Msa1404790-mRNA-1:exon:23839;Parent=Msa1404790-mRNA-1
tig0023091 exon 20521 20598 20521 ID=Msa1404790-mRNA-1:exon:23838;Parent=Msa1404790-mRNA-1
tig0023091 exon 21400 21534 21400 ID=Msa1404790-mRNA-1:exon:23837;Parent=Msa1404790-mRNA-1
tig0023091 exon 22253 22289 22253 ID=Msa1404790-mRNA-1:exon:23836;Parent=Msa1404790-mRNA-1
tig0023091 CDS 22253 22289 22253 ID=Msa1404790-mRNA-1:cds;Parent=Msa1404790-mRNA-1
tig0023091 CDS 21400 21534 21400 ID=Msa1404790-mRNA-1:cds;Parent=Msa1404790-mRNA-1
tig0023091 CDS 20521 20598 20521 ID=Msa1404790-mRNA-1:cds;Parent=Msa1404790-mRNA-1
tig0023091 CDS 17782 20009 17782 ID=Msa1404790-mRNA-1:cds;Parent=Msa1404790-mRNA-1
tig0023091 three_prime_UTR 17305 17781 17305 ID=Msa1404790-mRNA-1:three_prime_utr;Parent=Msa1404790-mRNA-1
Gene Sequence

>Msa1404790

ATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGTAGGTAGGATGAAAGGTTTTAGAGATTGGGTTTTCTCCCAGCTATTGTCCAATTCATTGATCTCGCCAACGCCGTTATCAGGCAGTAATACTTTATATCTTGAAGACCGTCCAAGTGAAGATCTTAATGACCAAGAGAAGGGAAGAGATGAAGTTGAGTTGTTGAGTTCAACCCAGCTGTGTTGCGATGAAGAGAAGGAAGAGATGAAGCTGTCTCACACAGATTCTGTAGCATTGCCGATTCCGTCTGGCACATCAAACTCTTCTGCCAACCAGAGTAATCAGAGCAGTTCTACCTTGCAGCAAGCTTCAGATGCAGAAATTTATCAATCTCAACATAGTGGAAATGGAAGACGGAAGGATACTTTGGCAAAGGTTGAGGATCTCCAAGTTAAATTTTTCCGCCTTCTCCAGCGGCTTGGCCAGTCAAAAGAAAACCTCTTGGTCGCAAAGGTTCTTTATCGGATGCACCTGGCAACTTTGATTCGTGCTGAGGAAACGGATCTGCAAAGAGTTAACCTTAGTAGCAGTGGAGCCCGAGAAATAGCAAACCAACATGAGGCAGCTGGTATGCCTCAATTGGACTTCTCCTGCAGAATACTTGTCCTTGGTAAAACAGGAGTTGGAAAAAGTGCCACTATAAACTCTATATTTGATCAAGAAAAAGCCACGACTAATGCTTTTCAACCTGCTACCGATTGCATCCAAGAAATTGTGGGAACTGTCAACGGGCTTAACATAACGTTTATTGATACCCCTGGTTTCCTGCCTTCCTCTACCAATAATGTGAAGAGAAATAAGAGGATCATGCTTTCTGTGAAGAGATTCATTAGAAAGTCACCTCCAGACATCGTTTTGTACTTTGAACGGCTTGATCTGATCAATTCTGGTTATAGTGACTTCCCACTTTTGAAACTCATAACCGAGGTATTTGGTGCGGCAATCTGGTTCAACACTATCTTAGTCATGACTCATTCATCCTCATCTATTCCAGAAGGACCTAACGGATATACTGTTAATTATGATTCGTATACTTCTCAATGTACTAACGTAATACAGCAGTATATACATCAGGCAATGTTAGATTCAAGGCTAGAAAACCCTGCACTTTTTGTTGAGAACCATCCTCAGTGCCCTAGAAATATTTTGGGGGAGAAAATCCTTCCTAATGGACAGGTTTGGAGATCTCAACTCTTGTTATTTTGCATTTGTACCAAAGTTCTAGGTGACGTAAATTCCCTCCTTAAGTTTCAGAATGGTGTGGAATTAGGACCGACAAACAGTGCCCGAGTTCCTTCTCTGCCCCATCTCCTTTCGTCCCTGTTACGCCATCGCTCTGTATCCAATCAAAGTGGAATTGATGATGAAATTGAGGAAATATTACTTTCAGACAAAGAAGAAGGAAATGAGTATGATCAACTTCCATCCATACGAATCCTGACAAAATCCCAATTTGAAAAGTTGTCCAAGTTGCAAAAAGAAGATTATCTGGATGAATTGGAATACAGGGAGACCCTTTACTTAAAGAAACAAATGAAAGAAGAGTACCGTAGACGCAAGGAGAAGTTACTTTTAGAAGAGCAAAAGTTTTCTAATAGTGATAATTCTGATGATCAACAGGGTCCTCCAGAACCTGTTCAGTTACCAGATATGGCTGTTCCTCTAAGTTTTGATTCAGATTGCGCTATACATAGATACCGCTGCCTTGTTGATAATGACCAATTACTTGTGAGACCTGTTCTTGATCCCCAAGGATGGGATCACGATGTGGGTTTTGATGGTATAAACTTGGAGACAACTACCGAAGTAAAGAAGAATGTATATGCCTCTGTTGTGGGACAAATGCATAAGAATAAGCAGGATTTCAATATTCAATCTGAGTGTGCTGCAGCCTATGTCAATCCGATGGGTCCTAGTTACTCTATCGGTGTTGACGTTCAATCTGTTGGTGGTAAAGATATGGTTTGTACCGTTCATAGCAACACAAAATTGAAAAACATAAAGCACAACATTGCTGACTGTGGTGTTTCTTTGACATCTTTCGGAAAGAAATACTACGTGGGTGCAAAACTTGAGGATACTTTGCTAATCGGAAAGAGATTAAAATTTGTGATTAATGCTGGCCGTATGGAAGGTCAGGGACAAGTGGCGCACGGTGGAAGTTTTGAAGCTTGTTTACGAGGGGAAGATTATCCCATCAGAAATGACAACTTAAGCCTGACAATGACAGTCCTCTCTTTCAATAAAGAGACGGTGTTGAGTGGTAATTTACAATCTGAGTTCAGGTTGAGTCGAAGCCTGAAAGCAACTGTTAGTGCTAATCTAAATAGTCGCAAAATGGGGCAAATATGTATTAAGACTAGTAGTTCTGAGCATTTACAAATTGCCTTGGTTGCAGTTTTCTCAATTTTGAAGGTTCTGTTACATAGAAAGGAAATCTAG
Protein sequence

>Msa1404790

MAEWSKAPDSSSVGRMKGFRDWVFSQLLSNSLISPTPLSGSNTLYLEDRPSEDLNDQEKGRDEVELLSSTQLCCDEEKEEMKLSHTDSVALPIPSGTSNSSANQSNQSSSTLQQASDAEIYQSQHSGNGRRKDTLAKVEDLQVKFFRLLQRLGQSKENLLVAKVLYRMHLATLIRAEETDLQRVNLSSSGAREIANQHEAAGMPQLDFSCRILVLGKTGVGKSATINSIFDQEKATTNAFQPATDCIQEIVGTVNGLNITFIDTPGFLPSSTNNVKRNKRIMLSVKRFIRKSPPDIVLYFERLDLINSGYSDFPLLKLITEVFGAAIWFNTILVMTHSSSSIPEGPNGYTVNYDSYTSQCTNVIQQYIHQAMLDSRLENPALFVENHPQCPRNILGEKILPNGQVWRSQLLLFCICTKVLGDVNSLLKFQNGVELGPTNSARVPSLPHLLSSLLRHRSVSNQSGIDDEIEEILLSDKEEGNEYDQLPSIRILTKSQFEKLSKLQKEDYLDELEYRETLYLKKQMKEEYRRRKEKLLLEEQKFSNSDNSDDQQGPPEPVQLPDMAVPLSFDSDCAIHRYRCLVDNDQLLVRPVLDPQGWDHDVGFDGINLETTTEVKKNVYASVVGQMHKNKQDFNIQSECAAAYVNPMGPSYSIGVDVQSVGGKDMVCTVHSNTKLKNIKHNIADCGVSLTSFGKKYYVGAKLEDTLLIGKRLKFVINAGRMEGQGQVAHGGSFEACLRGEDYPIRNDNLSLTMTVLSFNKETVLSGNLQSEFRLSRSLKATVSANLNSRKMGQICIKTSSSEHLQIALVAVFSILKVLLHRKEI*