Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0870480 | XP_003618391.1 | 92.013 | 313 | 24 | 1 | 1 | 312 | 1 | 313 | 0.0 | 577 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0870480 | sp|P34909|NOT4_YEAST | 48.276 | 58 | 25 | 2 | 239 | 293 | 33 | 88 | 3.74e-12 | 70.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0870480 | G7KJX0 | 92.013 | 313 | 24 | 1 | 1 | 312 | 1 | 313 | 0.0 | 577 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002110 | Msa0870480 | 0.801303 | 9.594539e-49 | -8.615850e-47 |
| Msa0004180 | Msa0870480 | 0.836732 | 7.875226e-57 | -8.615850e-47 |
| Msa0016380 | Msa0870480 | 0.804339 | 2.265137e-49 | -8.615850e-47 |
| Msa0017710 | Msa0870480 | -0.811211 | 7.843780e-51 | -8.615850e-47 |
| Msa0018610 | Msa0870480 | 0.828440 | 8.978027e-55 | -8.615850e-47 |
| Msa0021240 | Msa0870480 | 0.803363 | 3.613227e-49 | -8.615850e-47 |
| Msa0024320 | Msa0870480 | 0.806188 | 9.286607e-50 | -8.615850e-47 |
| Msa0024500 | Msa0870480 | 0.815982 | 6.991715e-52 | -8.615850e-47 |
| Msa0027030 | Msa0870480 | 0.803353 | 3.630402e-49 | -8.615850e-47 |
| Msa0027120 | Msa0870480 | 0.837413 | 5.273540e-57 | -8.615850e-47 |
| Msa0033190 | Msa0870480 | 0.813710 | 2.230295e-51 | -8.615850e-47 |
| Msa0039590 | Msa0870480 | 0.801539 | 8.584484e-49 | -8.615850e-47 |
| Msa0047560 | Msa0870480 | 0.815587 | 8.565845e-52 | -8.615850e-47 |
| Msa0053360 | Msa0870480 | 0.809537 | 1.801874e-50 | -8.615850e-47 |
| Msa0065400 | Msa0870480 | 0.818579 | 1.821509e-52 | -8.615850e-47 |
| Msa0065520 | Msa0870480 | 0.832843 | 7.499847e-56 | -8.615850e-47 |
| Msa0065670 | Msa0870480 | 0.806594 | 7.625763e-50 | -8.615850e-47 |
| Msa0075080 | Msa0870480 | 0.819568 | 1.084688e-52 | -8.615850e-47 |
| Msa0076100 | Msa0870480 | 0.811539 | 6.654556e-51 | -8.615850e-47 |
| Msa0076590 | Msa0870480 | 0.806868 | 6.674688e-50 | -8.615850e-47 |
| Msa0077570 | Msa0870480 | 0.854406 | 1.257122e-61 | -8.615850e-47 |
| Msa0078160 | Msa0870480 | 0.836557 | 8.727312e-57 | -8.615850e-47 |
| Msa0078170 | Msa0870480 | 0.831077 | 2.047781e-55 | -8.615850e-47 |
| Msa0079840 | Msa0870480 | 0.812536 | 4.035836e-51 | -8.615850e-47 |
| Msa0080100 | Msa0870480 | 0.807848 | 4.136954e-50 | -8.615850e-47 |
| Msa0085690 | Msa0870480 | 0.826590 | 2.495505e-54 | -8.615850e-47 |
| Msa0093360 | Msa0870480 | 0.816587 | 5.121118e-52 | -8.615850e-47 |
| Msa0095890 | Msa0870480 | 0.810013 | 1.423656e-50 | -8.615850e-47 |
| Msa0098800 | Msa0870480 | 0.806725 | 7.153860e-50 | -8.615850e-47 |
| Msa0120100 | Msa0870480 | 0.819229 | 1.296248e-52 | -8.615850e-47 |
| Msa0120160 | Msa0870480 | 0.813529 | 2.444187e-51 | -8.615850e-47 |
| Msa0605150 | Msa0870480 | 0.801969 | 7.004600e-49 | -8.615850e-47 |
| Msa0605210 | Msa0870480 | 0.801397 | 9.179368e-49 | -8.615850e-47 |
| Msa0606340 | Msa0870480 | 0.804978 | 1.666491e-49 | -8.615850e-47 |
| Msa0606350 | Msa0870480 | 0.802641 | 5.094546e-49 | -8.615850e-47 |
| Msa0606380 | Msa0870480 | 0.814046 | 1.880624e-51 | -8.615850e-47 |
| Msa0624260 | Msa0870480 | 0.815385 | 9.499647e-52 | -8.615850e-47 |
| Msa0624360 | Msa0870480 | 0.823162 | 1.606650e-53 | -8.615850e-47 |
| Msa0625900 | Msa0870480 | 0.829675 | 4.507885e-55 | -8.615850e-47 |
| Msa0626900 | Msa0870480 | 0.816378 | 5.704233e-52 | -8.615850e-47 |
| Msa0630910 | Msa0870480 | 0.809094 | 2.241977e-50 | -8.615850e-47 |
| Msa0634900 | Msa0870480 | 0.826630 | 2.440858e-54 | -8.615850e-47 |
| Msa0638300 | Msa0870480 | 0.806034 | 1.000726e-49 | -8.615850e-47 |
| Msa0644220 | Msa0870480 | 0.851125 | 1.087998e-60 | -8.615850e-47 |
| Msa0646030 | Msa0870480 | 0.800085 | 1.700320e-48 | -8.615850e-47 |
| Msa0651990 | Msa0870480 | 0.851177 | 1.051922e-60 | -8.615850e-47 |
| Msa0659020 | Msa0870480 | 0.800760 | 1.238792e-48 | -8.615850e-47 |
| Msa0659360 | Msa0870480 | 0.818126 | 2.305971e-52 | -8.615850e-47 |
| Msa0659580 | Msa0870480 | 0.800128 | 1.666565e-48 | -8.615850e-47 |
| Msa0661540 | Msa0870480 | 0.803364 | 3.611057e-49 | -8.615850e-47 |
| Msa0662230 | Msa0870480 | 0.809476 | 1.856892e-50 | -8.615850e-47 |
| Msa0663690 | Msa0870480 | 0.831295 | 1.810134e-55 | -8.615850e-47 |
| Msa0681190 | Msa0870480 | 0.812029 | 5.206000e-51 | -8.615850e-47 |
| Msa0684030 | Msa0870480 | 0.861113 | 1.288833e-63 | -8.615850e-47 |
| Msa0685390 | Msa0870480 | 0.801148 | 1.032118e-48 | -8.615850e-47 |
| Msa0701460 | Msa0870480 | 0.812666 | 3.780570e-51 | -8.615850e-47 |
| Msa0701530 | Msa0870480 | 0.811754 | 5.977935e-51 | -8.615850e-47 |
| Msa0708380 | Msa0870480 | 0.812925 | 3.316811e-51 | -8.615850e-47 |
| Msa0713570 | Msa0870480 | 0.800433 | 1.444700e-48 | -8.615850e-47 |
| Msa0719330 | Msa0870480 | 0.808308 | 3.301281e-50 | -8.615850e-47 |
| Msa0729740 | Msa0870480 | 0.812960 | 3.258431e-51 | -8.615850e-47 |
| Msa0730250 | Msa0870480 | 0.816041 | 6.784715e-52 | -8.615850e-47 |
| Msa0738460 | Msa0870480 | 0.806046 | 9.947367e-50 | -8.615850e-47 |
| Msa0745010 | Msa0870480 | 0.826956 | 2.040317e-54 | -8.615850e-47 |
| Msa0745630 | Msa0870480 | 0.820931 | 5.285193e-53 | -8.615850e-47 |
| Msa0750200 | Msa0870480 | 0.818163 | 2.262511e-52 | -8.615850e-47 |
| Msa0752950 | Msa0870480 | 0.808266 | 3.370796e-50 | -8.615850e-47 |
| Msa0755550 | Msa0870480 | 0.803350 | 3.635002e-49 | -8.615850e-47 |
| Msa0758880 | Msa0870480 | 0.811121 | 8.201479e-51 | -8.615850e-47 |
| Msa0766910 | Msa0870480 | 0.822132 | 2.789541e-53 | -8.615850e-47 |
| Msa0769910 | Msa0870480 | 0.836251 | 1.044330e-56 | -8.615850e-47 |
| Msa0770540 | Msa0870480 | 0.826997 | 1.995604e-54 | -8.615850e-47 |
| Msa0772160 | Msa0870480 | 0.810273 | 1.250855e-50 | -8.615850e-47 |
| Msa0776590 | Msa0870480 | 0.811155 | 8.063405e-51 | -8.615850e-47 |
| Msa0784780 | Msa0870480 | 0.805588 | 1.241760e-49 | -8.615850e-47 |
| Msa0790650 | Msa0870480 | 0.820806 | 5.647049e-53 | -8.615850e-47 |
| Msa0792410 | Msa0870480 | -0.827370 | 1.623879e-54 | -8.615850e-47 |
| Msa0792840 | Msa0870480 | 0.801511 | 8.699245e-49 | -8.615850e-47 |
| Msa0794900 | Msa0870480 | 0.821231 | 4.505917e-53 | -8.615850e-47 |
| Msa0795910 | Msa0870480 | 0.817176 | 3.776560e-52 | -8.615850e-47 |
| Msa0797180 | Msa0870480 | 0.806646 | 7.436707e-50 | -8.615850e-47 |
| Msa0801920 | Msa0870480 | 0.810451 | 1.145189e-50 | -8.615850e-47 |
| Msa0808500 | Msa0870480 | 0.836928 | 7.019247e-57 | -8.615850e-47 |
| Msa0817880 | Msa0870480 | 0.833049 | 6.665241e-56 | -8.615850e-47 |
| Msa0829250 | Msa0870480 | 0.838500 | 2.771141e-57 | -8.615850e-47 |
| Msa0833030 | Msa0870480 | 0.802151 | 6.426756e-49 | -8.615850e-47 |
| Msa0833200 | Msa0870480 | 0.807919 | 3.994785e-50 | -8.615850e-47 |
| Msa0833360 | Msa0870480 | 0.818747 | 1.667636e-52 | -8.615850e-47 |
| Msa0835050 | Msa0870480 | 0.802497 | 5.454030e-49 | -8.615850e-47 |
| Msa0838120 | Msa0870480 | 0.810373 | 1.190519e-50 | -8.615850e-47 |
| Msa0122930 | Msa0870480 | 0.834821 | 2.401310e-56 | -8.615850e-47 |
| Msa0132080 | Msa0870480 | 0.803587 | 3.246516e-49 | -8.615850e-47 |
| Msa0133390 | Msa0870480 | 0.807320 | 5.355657e-50 | -8.615850e-47 |
| Msa0137010 | Msa0870480 | 0.814221 | 1.720235e-51 | -8.615850e-47 |
| Msa0140870 | Msa0870480 | 0.816979 | 4.182995e-52 | -8.615850e-47 |
| Msa0167570 | Msa0870480 | 0.807497 | 4.912036e-50 | -8.615850e-47 |
| Msa0168470 | Msa0870480 | 0.800983 | 1.115490e-48 | -8.615850e-47 |
| Msa0175240 | Msa0870480 | 0.816239 | 6.125995e-52 | -8.615850e-47 |
| Msa0184800 | Msa0870480 | 0.814902 | 1.216329e-51 | -8.615850e-47 |
| Msa0185540 | Msa0870480 | 0.835663 | 1.471469e-56 | -8.615850e-47 |
| Msa0186510 | Msa0870480 | 0.815218 | 1.034827e-51 | -8.615850e-47 |
| Msa0208710 | Msa0870480 | 0.811279 | 7.581273e-51 | -8.615850e-47 |
| Msa0209590 | Msa0870480 | 0.800038 | 1.738644e-48 | -8.615850e-47 |
| Msa0211460 | Msa0870480 | -0.807967 | 3.902203e-50 | -8.615850e-47 |
| Msa0211600 | Msa0870480 | 0.809419 | 1.910002e-50 | -8.615850e-47 |
| Msa0212950 | Msa0870480 | 0.833599 | 4.861946e-56 | -8.615850e-47 |
| Msa0213590 | Msa0870480 | 0.830316 | 3.145094e-55 | -8.615850e-47 |
| Msa0224870 | Msa0870480 | -0.816652 | 4.952819e-52 | -8.615850e-47 |
| Msa0225080 | Msa0870480 | 0.811235 | 7.750101e-51 | -8.615850e-47 |
| Msa0225790 | Msa0870480 | 0.806248 | 9.022475e-50 | -8.615850e-47 |
| Msa0229350 | Msa0870480 | 0.823763 | 1.162497e-53 | -8.615850e-47 |
| Msa0367590 | Msa0870480 | 0.803110 | 4.076147e-49 | -8.615850e-47 |
| Msa0369080 | Msa0870480 | 0.802714 | 4.920739e-49 | -8.615850e-47 |
| Msa0371350 | Msa0870480 | 0.813130 | 2.991197e-51 | -8.615850e-47 |
| Msa0375570 | Msa0870480 | 0.827648 | 1.393000e-54 | -8.615850e-47 |
| Msa0377990 | Msa0870480 | 0.806840 | 6.766307e-50 | -8.615850e-47 |
| Msa0382050 | Msa0870480 | 0.837966 | 3.804018e-57 | -8.615850e-47 |
| Msa0385770 | Msa0870480 | 0.813505 | 2.474805e-51 | -8.615850e-47 |
| Msa0412580 | Msa0870480 | 0.818730 | 1.682888e-52 | -8.615850e-47 |
| Msa0420280 | Msa0870480 | 0.804614 | 1.985174e-49 | -8.615850e-47 |
| Msa0424220 | Msa0870480 | 0.832353 | 9.922108e-56 | -8.615850e-47 |
| Msa0427600 | Msa0870480 | 0.804780 | 1.833053e-49 | -8.615850e-47 |
| Msa0428300 | Msa0870480 | 0.840025 | 1.114939e-57 | -8.615850e-47 |
| Msa0431550 | Msa0870480 | 0.819013 | 1.451221e-52 | -8.615850e-47 |
| Msa0436660 | Msa0870480 | 0.810736 | 9.939149e-51 | -8.615850e-47 |
| Msa0450890 | Msa0870480 | 0.814765 | 1.303791e-51 | -8.615850e-47 |
| Msa0456450 | Msa0870480 | 0.806922 | 6.501392e-50 | -8.615850e-47 |
| Msa0457070 | Msa0870480 | 0.807351 | 5.274587e-50 | -8.615850e-47 |
| Msa0461150 | Msa0870480 | 0.821297 | 4.351884e-53 | -8.615850e-47 |
| Msa0469770 | Msa0870480 | 0.820400 | 6.998892e-53 | -8.615850e-47 |
| Msa0471130 | Msa0870480 | 0.824466 | 7.949946e-54 | -8.615850e-47 |
| Msa0474630 | Msa0870480 | 0.820439 | 6.855185e-53 | -8.615850e-47 |
| Msa0474660 | Msa0870480 | 0.810333 | 1.214604e-50 | -8.615850e-47 |
| Msa0476140 | Msa0870480 | 0.844122 | 9.191384e-59 | -8.615850e-47 |
| Msa0476560 | Msa0870480 | 0.801306 | 9.583151e-49 | -8.615850e-47 |
| Msa0238960 | Msa0870480 | 0.820526 | 6.547450e-53 | -8.615850e-47 |
| Msa0240590 | Msa0870480 | 0.814977 | 1.170353e-51 | -8.615850e-47 |
| Msa0253230 | Msa0870480 | 0.828805 | 7.331140e-55 | -8.615850e-47 |
| Msa0259450 | Msa0870480 | 0.808004 | 3.832978e-50 | -8.615850e-47 |
| Msa0259570 | Msa0870480 | 0.814709 | 1.342042e-51 | -8.615850e-47 |
| Msa0260640 | Msa0870480 | 0.801937 | 7.113371e-49 | -8.615850e-47 |
| Msa0261350 | Msa0870480 | 0.804497 | 2.100281e-49 | -8.615850e-47 |
| Msa0266150 | Msa0870480 | 0.802258 | 6.109657e-49 | -8.615850e-47 |
| Msa0267450 | Msa0870480 | 0.825944 | 3.556105e-54 | -8.615850e-47 |
| Msa0267510 | Msa0870480 | 0.827649 | 1.391912e-54 | -8.615850e-47 |
| Msa0276030 | Msa0870480 | 0.801258 | 9.801817e-49 | -8.615850e-47 |
| Msa0276800 | Msa0870480 | 0.822185 | 2.711835e-53 | -8.615850e-47 |
| Msa0279090 | Msa0870480 | 0.808720 | 2.696451e-50 | -8.615850e-47 |
| Msa0279810 | Msa0870480 | -0.835461 | 1.655736e-56 | -8.615850e-47 |
| Msa0299130 | Msa0870480 | 0.808059 | 3.730258e-50 | -8.615850e-47 |
| Msa0304070 | Msa0870480 | 0.802774 | 4.781621e-49 | -8.615850e-47 |
| Msa0305630 | Msa0870480 | 0.812172 | 4.846572e-51 | -8.615850e-47 |
| Msa0307630 | Msa0870480 | -0.822480 | 2.316696e-53 | -8.615850e-47 |
| Msa0311130 | Msa0870480 | 0.804860 | 1.764025e-49 | -8.615850e-47 |
| Msa0316720 | Msa0870480 | 0.823942 | 1.055388e-53 | -8.615850e-47 |
| Msa0317820 | Msa0870480 | 0.809421 | 1.908460e-50 | -8.615850e-47 |
| Msa0319220 | Msa0870480 | -0.829343 | 5.428657e-55 | -8.615850e-47 |
| Msa0331070 | Msa0870480 | 0.828379 | 9.290623e-55 | -8.615850e-47 |
| Msa0340700 | Msa0870480 | 0.808962 | 2.393040e-50 | -8.615850e-47 |
| Msa0363090 | Msa0870480 | 0.826343 | 2.857601e-54 | -8.615850e-47 |
| Msa0484590 | Msa0870480 | 0.836853 | 7.336528e-57 | -8.615850e-47 |
| Msa0485210 | Msa0870480 | 0.839636 | 1.407092e-57 | -8.615850e-47 |
| Msa0485260 | Msa0870480 | 0.844519 | 7.189669e-59 | -8.615850e-47 |
| Msa0490740 | Msa0870480 | 0.843133 | 1.689425e-58 | -8.615850e-47 |
| Msa0491160 | Msa0870480 | 0.807314 | 5.368844e-50 | -8.615850e-47 |
| Msa0492330 | Msa0870480 | 0.808727 | 2.687385e-50 | -8.615850e-47 |
| Msa0506700 | Msa0870480 | 0.817059 | 4.012149e-52 | -8.615850e-47 |
| Msa0507960 | Msa0870480 | 0.802578 | 5.249237e-49 | -8.615850e-47 |
| Msa0518150 | Msa0870480 | 0.806059 | 9.887777e-50 | -8.615850e-47 |
| Msa0519070 | Msa0870480 | 0.840540 | 8.178204e-58 | -8.615850e-47 |
| Msa0519100 | Msa0870480 | 0.836214 | 1.066893e-56 | -8.615850e-47 |
| Msa0524080 | Msa0870480 | 0.826703 | 2.345633e-54 | -8.615850e-47 |
| Msa0525180 | Msa0870480 | 0.810572 | 1.078551e-50 | -8.615850e-47 |
| Msa0532750 | Msa0870480 | 0.804807 | 1.809509e-49 | -8.615850e-47 |
| Msa0538050 | Msa0870480 | 0.801332 | 9.464385e-49 | -8.615850e-47 |
| Msa0550980 | Msa0870480 | 0.806086 | 9.756034e-50 | -8.615850e-47 |
| Msa0552660 | Msa0870480 | 0.807158 | 5.795755e-50 | -8.615850e-47 |
| Msa0556450 | Msa0870480 | 0.850797 | 1.346227e-60 | -8.615850e-47 |
| Msa0559640 | Msa0870480 | 0.811709 | 6.111440e-51 | -8.615850e-47 |
| Msa0568460 | Msa0870480 | 0.833089 | 6.515941e-56 | -8.615850e-47 |
| Msa0576180 | Msa0870480 | -0.803949 | 2.730036e-49 | -8.615850e-47 |
| Msa0580410 | Msa0870480 | 0.817958 | 2.517593e-52 | -8.615850e-47 |
| Msa0580890 | Msa0870480 | 0.802151 | 6.427548e-49 | -8.615850e-47 |
| Msa0582270 | Msa0870480 | 0.805526 | 1.279362e-49 | -8.615850e-47 |
| Msa0585720 | Msa0870480 | 0.807905 | 4.021987e-50 | -8.615850e-47 |
| Msa0598470 | Msa0870480 | 0.814002 | 1.922648e-51 | -8.615850e-47 |
| Msa0853200 | Msa0870480 | 0.803960 | 2.716411e-49 | -8.615850e-47 |
| Msa0858250 | Msa0870480 | 0.803417 | 3.520536e-49 | -8.615850e-47 |
| Msa0866510 | Msa0870480 | 0.824533 | 7.666460e-54 | -8.615850e-47 |
| Msa0868500 | Msa0870480 | 0.816820 | 4.540627e-52 | -8.615850e-47 |
| Msa0868510 | Msa0870480 | 0.831927 | 1.264390e-55 | -8.615850e-47 |
| Msa0868520 | Msa0870480 | 0.817799 | 2.734348e-52 | -8.615850e-47 |
| Msa0869420 | Msa0870480 | 0.809436 | 1.894230e-50 | -8.615850e-47 |
| Msa0870480 | Msa0876030 | 0.802109 | 6.557985e-49 | -8.615850e-47 |
| Msa0870480 | Msa0901660 | 0.801456 | 8.929087e-49 | -8.615850e-47 |
| Msa0870480 | Msa0903590 | 0.924899 | 3.798950e-90 | -8.615850e-47 |
| Msa0870480 | Msa0906100 | 0.809742 | 1.628335e-50 | -8.615850e-47 |
| Msa0870480 | Msa0925630 | 0.804915 | 1.717790e-49 | -8.615850e-47 |
| Msa0870480 | Msa0928060 | 0.805891 | 1.072356e-49 | -8.615850e-47 |
| Msa0870480 | Msa0938150 | 0.843170 | 1.651619e-58 | -8.615850e-47 |
| Msa0870480 | Msa0941150 | 0.814895 | 1.220684e-51 | -8.615850e-47 |
| Msa0870480 | Msa0941420 | 0.810304 | 1.232212e-50 | -8.615850e-47 |
| Msa0870480 | Msa0964400 | 0.803721 | 3.045869e-49 | -8.615850e-47 |
| Msa0870480 | Msa0967890 | 0.811664 | 6.251833e-51 | -8.615850e-47 |
| Msa0870480 | Msa0968060 | 0.811590 | 6.488014e-51 | -8.615850e-47 |
| Msa0870480 | Msa0973010 | 0.802705 | 4.941400e-49 | -8.615850e-47 |
| Msa0870480 | Msa0973080 | 0.849353 | 3.415898e-60 | -8.615850e-47 |
| Msa0870480 | Msa0974410 | 0.812314 | 4.512951e-51 | -8.615850e-47 |
| Msa0870480 | Msa0975260 | 0.832609 | 8.574649e-56 | -8.615850e-47 |
| Msa0870480 | Msa0975440 | 0.840667 | 7.572908e-58 | -8.615850e-47 |
| Msa0870480 | Msa0978290 | 0.802141 | 6.457038e-49 | -8.615850e-47 |
| Msa0870480 | Msa0978540 | 0.805053 | 1.606928e-49 | -8.615850e-47 |
| Msa0870480 | Msa0978550 | 0.832697 | 8.153372e-56 | -8.615850e-47 |
| Msa0870480 | Msa0978560 | 0.814977 | 1.170271e-51 | -8.615850e-47 |
| Msa0870480 | Msa1002550 | 0.818590 | 1.810756e-52 | -8.615850e-47 |
| Msa0870480 | Msa1017610 | 0.822671 | 2.090501e-53 | -8.615850e-47 |
| Msa0870480 | Msa1020160 | 0.814791 | 1.287215e-51 | -8.615850e-47 |
| Msa0870480 | Msa1022660 | 0.801148 | 1.032040e-48 | -8.615850e-47 |
| Msa0870480 | Msa1028890 | 0.810278 | 1.247729e-50 | -8.615850e-47 |
| Msa0870480 | Msa1029010 | 0.829574 | 4.770205e-55 | -8.615850e-47 |
| Msa0870480 | Msa1031190 | 0.808393 | 3.166681e-50 | -8.615850e-47 |
| Msa0870480 | Msa1036260 | 0.802375 | 5.779324e-49 | -8.615850e-47 |
| Msa0870480 | Msa1039150 | 0.805858 | 1.089489e-49 | -8.615850e-47 |
| Msa0870480 | Msa1044050 | 0.807047 | 6.116346e-50 | -8.615850e-47 |
| Msa0870480 | Msa1068110 | 0.811173 | 7.990426e-51 | -8.615850e-47 |
| Msa0870480 | Msa1070370 | 0.806101 | 9.684831e-50 | -8.615850e-47 |
| Msa0870480 | Msa1078120 | 0.815383 | 9.508302e-52 | -8.615850e-47 |
| Msa0870480 | Msa1078590 | 0.817307 | 3.528379e-52 | -8.615850e-47 |
| Msa0870480 | Msa1078760 | 0.808912 | 2.453196e-50 | -8.615850e-47 |
| Msa0870480 | Msa1088740 | 0.800652 | 1.303469e-48 | -8.615850e-47 |
| Msa0870480 | Msa1089880 | 0.838590 | 2.627670e-57 | -8.615850e-47 |
| Msa0870480 | Msa1091400 | 0.808580 | 2.888649e-50 | -8.615850e-47 |
| Msa0870480 | Msa1091450 | 0.809644 | 1.708695e-50 | -8.615850e-47 |
| Msa0870480 | Msa1095880 | 0.806813 | 6.854116e-50 | -8.615850e-47 |
| Msa0870480 | Msa1106730 | 0.815725 | 7.978128e-52 | -8.615850e-47 |
| Msa0870480 | Msa1111910 | -0.815962 | 7.064516e-52 | -8.615850e-47 |
| Msa0870480 | Msa1119420 | 0.806516 | 7.920707e-50 | -8.615850e-47 |
| Msa0870480 | Msa1122710 | 0.840665 | 7.585317e-58 | -8.615850e-47 |
| Msa0870480 | Msa1123260 | 0.804022 | 2.637266e-49 | -8.615850e-47 |
| Msa0870480 | Msa1132880 | 0.816422 | 5.575642e-52 | -8.615850e-47 |
| Msa0870480 | Msa1140480 | 0.822269 | 2.593047e-53 | -8.615850e-47 |
| Msa0870480 | Msa1143860 | 0.801438 | 9.003395e-49 | -8.615850e-47 |
| Msa0870480 | Msa1156430 | 0.805801 | 1.120253e-49 | -8.615850e-47 |
| Msa0870480 | Msa1158180 | 0.806507 | 7.954707e-50 | -8.615850e-47 |
| Msa0870480 | Msa1169590 | 0.800569 | 1.355357e-48 | -8.615850e-47 |
| Msa0870480 | Msa1190300 | 0.819765 | 9.779474e-53 | -8.615850e-47 |
| Msa0870480 | Msa1190350 | 0.808303 | 3.308847e-50 | -8.615850e-47 |
| Msa0870480 | Msa1190670 | 0.812844 | 3.454695e-51 | -8.615850e-47 |
| Msa0870480 | Msa1191530 | 0.829252 | 5.712383e-55 | -8.615850e-47 |
| Msa0870480 | Msa1199540 | 0.810169 | 1.317501e-50 | -8.615850e-47 |
| Msa0870480 | Msa1203320 | 0.807807 | 4.220199e-50 | -8.615850e-47 |
| Msa0870480 | Msa1204870 | 0.824522 | 7.713716e-54 | -8.615850e-47 |
| Msa0870480 | Msa1204900 | 0.820098 | 8.208380e-53 | -8.615850e-47 |
| Msa0870480 | Msa1209990 | 0.822803 | 1.947944e-53 | -8.615850e-47 |
| Msa0870480 | Msa1212210 | 0.805626 | 1.218715e-49 | -8.615850e-47 |
| Msa0870480 | Msa1215540 | 0.843133 | 1.689425e-58 | -8.615850e-47 |
| Msa0870480 | Msa1223620 | -0.807567 | 4.746656e-50 | -8.615850e-47 |
| Msa0870480 | Msa1225140 | 0.801717 | 7.894549e-49 | -8.615850e-47 |
| Msa0870480 | Msa1228600 | 0.846585 | 1.980369e-59 | -8.615850e-47 |
| Msa0870480 | Msa1240240 | 0.813637 | 2.314433e-51 | -8.615850e-47 |
| Msa0870480 | Msa1244940 | 0.805989 | 1.022509e-49 | -8.615850e-47 |
| Msa0870480 | Msa1255030 | 0.808934 | 2.425943e-50 | -8.615850e-47 |
| Msa0870480 | Msa1256490 | 0.818416 | 1.982749e-52 | -8.615850e-47 |
| Msa0870480 | Msa1263520 | -0.809772 | 1.604032e-50 | -8.615850e-47 |
| Msa0870480 | Msa1266120 | 0.826827 | 2.190935e-54 | -8.615850e-47 |
| Msa0870480 | Msa1266750 | 0.810271 | 1.252570e-50 | -8.615850e-47 |
| Msa0870480 | Msa1269730 | 0.836269 | 1.033076e-56 | -8.615850e-47 |
| Msa0870480 | Msa1270860 | 0.837876 | 4.011883e-57 | -8.615850e-47 |
| Msa0870480 | Msa1279200 | 0.813876 | 2.050299e-51 | -8.615850e-47 |
| Msa0870480 | Msa1287100 | 0.819678 | 1.023996e-52 | -8.615850e-47 |
| Msa0870480 | Msa1290090 | 0.803834 | 2.885162e-49 | -8.615850e-47 |
| Msa0870480 | Msa1291070 | 0.801133 | 1.039492e-48 | -8.615850e-47 |
| Msa0870480 | Msa1295210 | 0.810405 | 1.171883e-50 | -8.615850e-47 |
| Msa0870480 | Msa1295480 | 0.829143 | 6.068701e-55 | -8.615850e-47 |
| Msa0870480 | Msa1296810 | 0.827491 | 1.519528e-54 | -8.615850e-47 |
| Msa0870480 | Msa1297550 | 0.806362 | 8.534373e-50 | -8.615850e-47 |
| Msa0870480 | Msa1298480 | 0.825119 | 5.575442e-54 | -8.615850e-47 |
| Msa0870480 | Msa1301610 | 0.801890 | 7.273771e-49 | -8.615850e-47 |
| Msa0870480 | Msa1303690 | 0.805598 | 1.235690e-49 | -8.615850e-47 |
| Msa0870480 | Msa1308010 | 0.820949 | 5.234016e-53 | -8.615850e-47 |
| Msa0870480 | Msa1328680 | 0.816420 | 5.582441e-52 | -8.615850e-47 |
| Msa0870480 | Msa1335210 | 0.832013 | 1.204131e-55 | -8.615850e-47 |
| Msa0870480 | Msa1338600 | 0.825836 | 3.772564e-54 | -8.615850e-47 |
| Msa0870480 | Msa1341710 | 0.805115 | 1.559836e-49 | -8.615850e-47 |
| Msa0870480 | Msa1342360 | 0.806269 | 8.928733e-50 | -8.615850e-47 |
| Msa0870480 | Msa1346220 | 0.820722 | 5.901125e-53 | -8.615850e-47 |
| Msa0870480 | Msa1346340 | 0.822273 | 2.587052e-53 | -8.615850e-47 |
| Msa0870480 | Msa1348180 | 0.804413 | 2.185791e-49 | -8.615850e-47 |
| Msa0870480 | Msa1348870 | 0.831194 | 1.916924e-55 | -8.615850e-47 |
| Msa0870480 | Msa1350580 | 0.802941 | 4.417769e-49 | -8.615850e-47 |
| Msa0870480 | Msa1350590 | 0.801239 | 9.889483e-49 | -8.615850e-47 |
| Msa0870480 | Msa1352630 | 0.827263 | 1.723325e-54 | -8.615850e-47 |
| Msa0870480 | Msa1363170 | 0.807291 | 5.430919e-50 | -8.615850e-47 |
| Msa0870480 | Msa1366140 | 0.811586 | 6.501129e-51 | -8.615850e-47 |
| Msa0870480 | Msa1367920 | 0.836542 | 8.806303e-57 | -8.615850e-47 |
| Msa0870480 | Msa1369390 | 0.832363 | 9.866571e-56 | -8.615850e-47 |
| Msa0870480 | Msa1375650 | 0.807461 | 4.999143e-50 | -8.615850e-47 |
| Msa0870480 | Msa1376010 | 0.801363 | 9.330225e-49 | -8.615850e-47 |
| Msa0870480 | Msa1376510 | 0.816897 | 4.363286e-52 | -8.615850e-47 |
| Msa0870480 | Msa1379270 | 0.822287 | 2.568372e-53 | -8.615850e-47 |
| Msa0870480 | Msa1381830 | 0.813564 | 2.401705e-51 | -8.615850e-47 |
| Msa0870480 | Msa1386180 | 0.809376 | 1.950732e-50 | -8.615850e-47 |
| Msa0870480 | Msa1387100 | 0.813061 | 3.096809e-51 | -8.615850e-47 |
| Msa0870480 | Msa1387450 | 0.832596 | 8.636562e-56 | -8.615850e-47 |
| Msa0870480 | Msa1398150 | 0.801584 | 8.403668e-49 | -8.615850e-47 |
| Msa0870480 | Msa1401640 | 0.807316 | 5.365544e-50 | -8.615850e-47 |
| Msa0870480 | Msa1404810 | 0.835243 | 1.879739e-56 | -8.615850e-47 |
| Msa0870480 | Msa1405040 | 0.814761 | 1.306620e-51 | -8.615850e-47 |
| Msa0870480 | Msa1408230 | 0.804934 | 1.701711e-49 | -8.615850e-47 |
| Msa0870480 | Msa1408280 | 0.800267 | 1.561829e-48 | -8.615850e-47 |
| Msa0870480 | Msa1412330 | 0.806906 | 6.550667e-50 | -8.615850e-47 |
| Msa0870480 | Msa1414000 | 0.809111 | 2.224183e-50 | -8.615850e-47 |
| Msa0870480 | Msa1418210 | 0.826720 | 2.323798e-54 | -8.615850e-47 |
| Msa0870480 | Msa1418840 | 0.808704 | 2.716730e-50 | -8.615850e-47 |
| Msa0870480 | Msa1420600 | 0.814110 | 1.819957e-51 | -8.615850e-47 |
| Msa0870480 | Msa1425530 | 0.803324 | 3.681151e-49 | -8.615850e-47 |
| Msa0870480 | Msa1430630 | 0.801396 | 9.185309e-49 | -8.615850e-47 |
| Msa0870480 | Msa1436660 | 0.800371 | 1.486863e-48 | -8.615850e-47 |
| Msa0870480 | Msa1439000 | 0.847381 | 1.198754e-59 | -8.615850e-47 |
| Msa0870480 | Msa1440140 | 0.813261 | 2.799073e-51 | -8.615850e-47 |
| Msa0870480 | Msa1444130 | 0.804054 | 2.596282e-49 | -8.615850e-47 |
| Msa0870480 | Msa1444690 | 0.807120 | 5.901677e-50 | -8.615850e-47 |
| Msa0870480 | Msa1453540 | 0.825634 | 4.212042e-54 | -8.615850e-47 |
| Msa0870480 | Msa1459680 | 0.814963 | 1.178584e-51 | -8.615850e-47 |
| Msa0870480 | Msa1462610 | -0.824937 | 6.157245e-54 | -8.615850e-47 |
| Msa0870480 | Msa1462700 | 0.802975 | 4.346863e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0870480 | MtrunA17_Chr6g0451991 | 92.013 | 313 | 24 | 1 | 1 | 312 | 1 | 313 | 0.0 | 577 |
| Msa0870480 | MtrunA17_Chr4g0059601 | 38.312 | 308 | 144 | 10 | 13 | 284 | 21 | 318 | 2.18e-47 | 162 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0870480 | AT5G62910.1 | 37.188 | 320 | 128 | 9 | 5 | 284 | 11 | 297 | 5.22e-42 | 148 |
| Msa0870480 | AT5G62910.2 | 37.188 | 320 | 128 | 9 | 5 | 284 | 11 | 297 | 5.22e-42 | 148 |
| Msa0870480 | AT3G48070.1 | 40.484 | 289 | 133 | 10 | 14 | 284 | 22 | 289 | 9.74e-40 | 142 |
| Msa0870480 | AT3G48070.2 | 40.484 | 289 | 133 | 10 | 14 | 284 | 22 | 289 | 5.55e-39 | 140 |
| Msa0870480 | AT3G48070.3 | 43.382 | 136 | 59 | 2 | 149 | 284 | 123 | 240 | 8.61e-31 | 118 |
| Msa0870480 | AT1G74870.1 | 30.769 | 286 | 152 | 8 | 13 | 292 | 20 | 265 | 2.79e-22 | 94.7 |
Find 82 sgRNAs with CRISPR-Local
Find 158 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAATGGAGTTGTTTATTA+TGG | 0.175343 | 6_1:+4892361 | None:intergenic |
| GTGGATGTTATGTTACAAAT+TGG | 0.304064 | 6_1:+4894198 | None:intergenic |
| TATTTCCTTCCTTCATTCAA+TGG | 0.307492 | 6_1:-4894122 | Msa0870480:exon |
| AGGGTTTACCCTCTTCTTCT+TGG | 0.319817 | 6_1:+4894066 | None:intergenic |
| ATCAAAGAAGAGCAACATAA+TGG | 0.326174 | 6_1:+4891594 | None:intergenic |
| CTCTTTCTTCGTTAAGTCCT+TGG | 0.332998 | 6_1:+4892124 | None:intergenic |
| TTCCTTCATTCAATGGCTCC+TGG | 0.362277 | 6_1:-4894115 | Msa0870480:exon |
| CTCCTGATTTCCTTGTATGA+TGG | 0.367192 | 6_1:+4892431 | None:intergenic |
| TGCATCCAAGCGAATGATTC+CGG | 0.369607 | 6_1:-4892386 | Msa0870480:CDS |
| CGAGGCTGATGGACGATGTC+CGG | 0.381759 | 6_1:-4891820 | Msa0870480:CDS |
| CACCATCATACAAGGAAATC+AGG | 0.389035 | 6_1:-4892433 | Msa0870480:CDS |
| TAATCAATCGTATGCTCTAT+AGG | 0.396032 | 6_1:+4892164 | None:intergenic |
| GGAGGAGGATAGAGAGGGAG+TGG | 0.417051 | 6_1:+4894179 | None:intergenic |
| GGATGCGATGTTGACTCAAC+TGG | 0.420478 | 6_1:-4892506 | Msa0870480:CDS |
| GGAGTTGTTTATTATGGATC+CGG | 0.422445 | 6_1:+4892367 | None:intergenic |
| CTCTTCTTCTTGGAGGAGAA+AGG | 0.450083 | 6_1:+4894076 | None:intergenic |
| AAGATGGATGCCTTGATGAT+TGG | 0.450875 | 6_1:-4892247 | Msa0870480:CDS |
| GTGATTATAACTACTTTGAA+TGG | 0.452304 | 6_1:+4892346 | None:intergenic |
| AGATGGATGCCTTGATGATT+GGG | 0.456418 | 6_1:-4892246 | Msa0870480:CDS |
| CAGTCATGCCGTATGAGTAC+AGG | 0.456682 | 6_1:-4891723 | Msa0870480:CDS |
| CTGATTTCCTTGTATGATGG+TGG | 0.457393 | 6_1:+4892434 | None:intergenic |
| GAGAGAGGAGGAGGATAGAG+AGG | 0.467908 | 6_1:+4894173 | None:intergenic |
| TCAAAGAAGAGCAACATAAT+GGG | 0.468229 | 6_1:+4891595 | None:intergenic |
| GGAGATCTCAATGAGGAAGA+TGG | 0.470422 | 6_1:-4892263 | Msa0870480:CDS |
| GGAGAAAGGAGGGTCAGAAA+TGG | 0.470846 | 6_1:+4894090 | None:intergenic |
| GTTTACCCTCTTCTTCTTGG+AGG | 0.476527 | 6_1:+4894069 | None:intergenic |
| ACACGAACAAGGAAGAAATT+CGG | 0.481896 | 6_1:+4891881 | None:intergenic |
| TCTAAATCCTCGTAACAGAT+AGG | 0.489191 | 6_1:+4891915 | None:intergenic |
| AATCATGTAGATGAAAATGT+TGG | 0.490500 | 6_1:-4891780 | Msa0870480:CDS |
| CTCGCAATGTGCTTAGAAGA+TGG | 0.498559 | 6_1:+4892467 | None:intergenic |
| ACTTAACGAAGAAAGAGTTC+AGG | 0.499489 | 6_1:-4892118 | Msa0870480:CDS |
| CCGTATGAGTACAGGGTGCT+AGG | 0.509540 | 6_1:-4891715 | Msa0870480:exon |
| GAATTTCTTCCTTGTTCGTG+TGG | 0.516729 | 6_1:-4891879 | Msa0870480:CDS |
| TGGATCCGGAATCATTCGCT+TGG | 0.519416 | 6_1:+4892381 | None:intergenic |
| ACTCTCAGTTAAATTCAAAC+CGG | 0.523325 | 6_1:-4892001 | Msa0870480:CDS |
| CACATATTAGCTGTCGAGCA+TGG | 0.524731 | 6_1:-4892079 | Msa0870480:CDS |
| ACTGTTTGCGTTTAAAGCAT+CGG | 0.537816 | 6_1:+4892214 | None:intergenic |
| TATAGGAGACTCTGAAACCA+TGG | 0.540448 | 6_1:+4892181 | None:intergenic |
| GAGGCTGATGGACGATGTCC+GGG | 0.541915 | 6_1:-4891819 | Msa0870480:CDS |
| AGGAGAAAAGAAAGAGAGGA+TGG | 0.542995 | 6_1:-4892413 | Msa0870480:CDS |
| CCTTGGACGAAGAGTGTCAT+CGG | 0.543532 | 6_1:+4892052 | None:intergenic |
| TTATGCGGCTTTGAGAGGTC+GGG | 0.543577 | 6_1:+4892023 | None:intergenic |
| TGCGTTTAAAGCATCGGCAA+CGG | 0.544753 | 6_1:+4892220 | None:intergenic |
| AATCAGGAGAAAAGAAAGAG+AGG | 0.545531 | 6_1:-4892417 | Msa0870480:CDS |
| GTTATGCGGCTTTGAGAGGT+CGG | 0.547395 | 6_1:+4892022 | None:intergenic |
| CGTTGATTCAGAAGCAGCCA+AGG | 0.549296 | 6_1:-4892141 | Msa0870480:CDS |
| GGAGAATCCACCATCATACA+AGG | 0.553085 | 6_1:-4892441 | Msa0870480:CDS |
| GAGAGGTCGGGCAAACACCT+TGG | 0.554629 | 6_1:+4892035 | None:intergenic |
| ACAAAATTGTACCTTGGTCA+TGG | 0.559149 | 6_1:-4891968 | Msa0870480:CDS |
| CTTGGACGAAGAGTGTCATC+GGG | 0.563390 | 6_1:+4892053 | None:intergenic |
| AACCAGGAGCCATTGAATGA+AGG | 0.565572 | 6_1:+4894113 | None:intergenic |
| TTCTAAGCACATTGCGAGCG+AGG | 0.567304 | 6_1:-4892462 | Msa0870480:CDS |
| AGAGAGGAGGAGGATAGAGA+GGG | 0.568919 | 6_1:+4894174 | None:intergenic |
| TTCTTCTTGGAGGAGAAAGG+AGG | 0.571919 | 6_1:+4894079 | None:intergenic |
| GGAGGGTCAGAAATGGAACC+AGG | 0.572536 | 6_1:+4894097 | None:intergenic |
| CTTTCTCCTCCAAGAAGAAG+AGG | 0.573316 | 6_1:-4894075 | Msa0870480:CDS |
| CAACGGCCTCCCAATCATCA+AGG | 0.573927 | 6_1:+4892237 | None:intergenic |
| GAGAGTTATGCGGCTTTGAG+AGG | 0.580285 | 6_1:+4892018 | None:intergenic |
| CCTAGCACCCTGTACTCATA+CGG | 0.584262 | 6_1:+4891715 | None:intergenic |
| AAACAGTAACGAGCATTCCA+TGG | 0.585443 | 6_1:-4892198 | Msa0870480:CDS |
| GTTATAATCACGATGAGTCA+AGG | 0.589115 | 6_1:-4892334 | Msa0870480:CDS |
| AGATGAAATCCACACGAACA+AGG | 0.589677 | 6_1:+4891870 | None:intergenic |
| AATCACGATGAGTCAAGGAA+TGG | 0.591635 | 6_1:-4892329 | Msa0870480:CDS |
| TTGATGTTAGGCGCGAACAA+TGG | 0.600363 | 6_1:-4893558 | Msa0870480:CDS |
| AAGAAGAGCAACATAATGGG+AGG | 0.606227 | 6_1:+4891598 | None:intergenic |
| AGCAAATCAAGCTTGATGTT+AGG | 0.609219 | 6_1:-4893570 | Msa0870480:CDS |
| GCGATGTTGACTCAACTGGA+AGG | 0.610065 | 6_1:-4892502 | Msa0870480:CDS |
| TCTTCTTGGAGGAGAAAGGA+GGG | 0.611617 | 6_1:+4894080 | None:intergenic |
| CGCGAACAATGGCTTTCTAG+AGG | 0.612582 | 6_1:-4893547 | Msa0870480:intron |
| AGTCATGCCGTATGAGTACA+GGG | 0.616497 | 6_1:-4891722 | Msa0870480:CDS |
| GTAACCACAAAATTGTACCT+TGG | 0.617000 | 6_1:-4891974 | Msa0870480:CDS |
| AGGAGCCATTGAATGAAGGA+AGG | 0.621016 | 6_1:+4894117 | None:intergenic |
| TTTCTCCTCCAAGAAGAAGA+GGG | 0.628934 | 6_1:-4894074 | Msa0870480:intron |
| GAATTTAACTGAGAGTTATG+CGG | 0.630591 | 6_1:+4892008 | None:intergenic |
| TTCCTCATTGAGATCTCCTG+AGG | 0.639616 | 6_1:+4892268 | None:intergenic |
| AGAAGAGCAACATAATGGGA+GGG | 0.640118 | 6_1:+4891599 | None:intergenic |
| ATTATTGTTCTCCATGACCA+AGG | 0.651182 | 6_1:+4891957 | None:intergenic |
| TAACAGATAGGACATTGACT+AGG | 0.694474 | 6_1:+4891927 | None:intergenic |
| CGATGTTGACTCAACTGGAA+GGG | 0.705315 | 6_1:-4892501 | Msa0870480:CDS |
| TGGATGCCTTGATGATTGGG+AGG | 0.706476 | 6_1:-4892243 | Msa0870480:CDS |
| TCAATGTCCTATCTGTTACG+AGG | 0.710111 | 6_1:-4891922 | Msa0870480:CDS |
| TTCCTCAGGAGATCTCAATG+AGG | 0.718693 | 6_1:-4892270 | Msa0870480:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAAAAAAAAATTCAATGA+TGG | - | chr6_1:4893188-4893207 | Msa0870480:intron | 10.0% |
| !! | ATAAAAATTAAAAAGGAGAA+GGG | + | chr6_1:4891746-4891765 | None:intergenic | 15.0% |
| !! | AATAAAAATTAAAAAGGAGA+AGG | + | chr6_1:4891747-4891766 | None:intergenic | 15.0% |
| !!! | TCATTCTGTTATTTATATAA+GGG | - | chr6_1:4892383-4892402 | Msa0870480:CDS | 15.0% |
| !! | TTAAAAAATATAATAGCGAA+TGG | + | chr6_1:4892489-4892508 | None:intergenic | 15.0% |
| !!! | TTAAAGATATTGTTTTTCAA+TGG | - | chr6_1:4893134-4893153 | Msa0870480:intron | 15.0% |
| !!! | TCAAATTTTTATAGCTCTAA+GGG | + | chr6_1:4891802-4891821 | None:intergenic | 20.0% |
| !!! | ATCAAATTTTTATAGCTCTA+AGG | + | chr6_1:4891803-4891822 | None:intergenic | 20.0% |
| !!! | AATCTTCATTTTTTATGTCA+TGG | - | chr6_1:4891975-4891994 | Msa0870480:CDS | 20.0% |
| !! | AACATTATGAATGTCATAAA+AGG | + | chr6_1:4892060-4892079 | None:intergenic | 20.0% |
| !!! | ATTCATAATGTTTTTCTCTA+AGG | - | chr6_1:4892068-4892087 | Msa0870480:CDS | 20.0% |
| !!! | TGTAAATTTTCATTATGTCA+TGG | - | chr6_1:4892127-4892146 | Msa0870480:CDS | 20.0% |
| !!! | TTATGATCATCATTTTCATA+TGG | - | chr6_1:4892271-4892290 | Msa0870480:CDS | 20.0% |
| !! | CAAAGAAAAACATAATCAAT+AGG | + | chr6_1:4892307-4892326 | None:intergenic | 20.0% |
| !! | AGAGAAAAAAAACTTATCAT+TGG | + | chr6_1:4892339-4892358 | None:intergenic | 20.0% |
| !!! | GTCATTCTGTTATTTATATA+AGG | - | chr6_1:4892382-4892401 | Msa0870480:CDS | 20.0% |
| !! | TTATTTATATAAGGGTTTAG+AGG | - | chr6_1:4892391-4892410 | Msa0870480:CDS | 20.0% |
| !! | CATTATATACCAAAATGATT+AGG | - | chr6_1:4892532-4892551 | Msa0870480:intron | 20.0% |
| !! | TATGAAAATAACTTATAGCT+TGG | - | chr6_1:4892895-4892914 | Msa0870480:intron | 20.0% |
| !!! | TTTTGTTTTTCAGTCAAAAA+GGG | - | chr6_1:4893263-4893282 | Msa0870480:intron | 20.0% |
| ! | AATGCAATGAAATGGAAAAT+GGG | + | chr6_1:4891890-4891909 | None:intergenic | 25.0% |
| ! | AAATGCAATGAAATGGAAAA+TGG | + | chr6_1:4891891-4891910 | None:intergenic | 25.0% |
| ! | CAAAACAAAATGCAATGAAA+TGG | + | chr6_1:4891898-4891917 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTGTTGAGTTCAA+AGG | - | chr6_1:4891908-4891927 | Msa0870480:CDS | 25.0% |
| !!! | TTTGTTTTGTTGAGTTCAAA+GGG | - | chr6_1:4891909-4891928 | Msa0870480:CDS | 25.0% |
| !!! | TTTCTATGTTTTGTTGTTCT+TGG | - | chr6_1:4891950-4891969 | Msa0870480:CDS | 25.0% |
| !!! | ATGTCATGGTTTTATCATAA+AGG | - | chr6_1:4891989-4892008 | Msa0870480:CDS | 25.0% |
| !! | TTTTCATTATGTCATGGTTT+TGG | - | chr6_1:4892133-4892152 | Msa0870480:CDS | 25.0% |
| !!! | TTGGTGTTTTTTGTTTTTGT+TGG | - | chr6_1:4892152-4892171 | Msa0870480:CDS | 25.0% |
| !!! | TTTTTGTTTTTGTTGGCTTA+TGG | - | chr6_1:4892159-4892178 | Msa0870480:CDS | 25.0% |
| !! | ATTGTGAATTTTCAGACTAA+TGG | - | chr6_1:4892183-4892202 | Msa0870480:CDS | 25.0% |
| !!! | TCATTTTGGTATATAATGCA+AGG | + | chr6_1:4892530-4892549 | None:intergenic | 25.0% |
| !! | AATTAAAGGCCTAATCATTT+TGG | + | chr6_1:4892544-4892563 | None:intergenic | 25.0% |
| !!! | CACATGTTGATTTCAATTAA+AGG | + | chr6_1:4892558-4892577 | None:intergenic | 25.0% |
| !!! | ATCATTGATTCCGAATTTTT+AGG | - | chr6_1:4892711-4892730 | Msa0870480:intron | 25.0% |
| !!! | ATTCCGAATTTTTAGGTTTT+AGG | - | chr6_1:4892718-4892737 | Msa0870480:intron | 25.0% |
| !! | TGCATAAACATTTGTCTTTT+AGG | - | chr6_1:4892775-4892794 | Msa0870480:intron | 25.0% |
| !! | GCATAAACATTTGTCTTTTA+GGG | - | chr6_1:4892776-4892795 | Msa0870480:intron | 25.0% |
| !! | ATTGACTTAAAGAGAGTTTA+TGG | - | chr6_1:4892808-4892827 | Msa0870480:intron | 25.0% |
| ! | TTATACTGTTTATCCAAACA+AGG | - | chr6_1:4893010-4893029 | Msa0870480:intron | 25.0% |
| !!! | CTTTTGTTTTTCAGTCAAAA+AGG | - | chr6_1:4893262-4893281 | Msa0870480:intron | 25.0% |
| ! | TTGAATGGAGTTGTTTATTA+TGG | + | chr6_1:4893432-4893451 | None:intergenic | 25.0% |
| ! | GTGATTATAACTACTTTGAA+TGG | + | chr6_1:4893447-4893466 | None:intergenic | 25.0% |
| ! | AATCATGTAGATGAAAATGT+TGG | - | chr6_1:4894010-4894029 | Msa0870480:intron | 25.0% |
| TATTTCCTTCCTTCATTCAA+TGG | - | chr6_1:4891668-4891687 | Msa0870480:three_prime_UTR | 30.0% | |
| TGCAATGCAATGCAATATAA+TGG | + | chr6_1:4892029-4892048 | None:intergenic | 30.0% | |
| TATAATAGCGAATGGATCAA+AGG | + | chr6_1:4892481-4892500 | None:intergenic | 30.0% | |
| AAAATAAGTCGATCCAAACA+GGG | + | chr6_1:4892744-4892763 | None:intergenic | 30.0% | |
| TAAAATAAGTCGATCCAAAC+AGG | + | chr6_1:4892745-4892764 | None:intergenic | 30.0% | |
| ATTTGACTGTTATTGCAGTA+AGG | + | chr6_1:4893036-4893055 | None:intergenic | 30.0% | |
| TAATCAATCGTATGCTCTAT+AGG | + | chr6_1:4893629-4893648 | None:intergenic | 30.0% | |
| GAATTTAACTGAGAGTTATG+CGG | + | chr6_1:4893785-4893804 | None:intergenic | 30.0% | |
| ACTCTCAGTTAAATTCAAAC+CGG | - | chr6_1:4893789-4893808 | Msa0870480:intron | 30.0% | |
| ! | CGATCTTTTTGTGACAAAAA+AGG | + | chr6_1:4893949-4893968 | None:intergenic | 30.0% |
| ! | TTATATAGTTTTCTGCATCC+CGG | + | chr6_1:4893992-4894011 | None:intergenic | 30.0% |
| TCAAAGAAGAGCAACATAAT+GGG | + | chr6_1:4894198-4894217 | None:intergenic | 30.0% | |
| ATCAAAGAAGAGCAACATAA+TGG | + | chr6_1:4894199-4894218 | None:intergenic | 30.0% | |
| ! | GAATTTTCAGACTAATGGCT+CGG | - | chr6_1:4892188-4892207 | Msa0870480:CDS | 35.0% |
| AGCAAATCAAGCTTGATGTT+AGG | - | chr6_1:4892220-4892239 | Msa0870480:CDS | 35.0% | |
| ! | AAGCTTAGCTTAGTTAGTCT+TGG | - | chr6_1:4892635-4892654 | Msa0870480:intron | 35.0% |
| GGGCCTAAAACCTAAAAATT+CGG | + | chr6_1:4892724-4892743 | None:intergenic | 35.0% | |
| CTCTTTAAGTCAATCCAAAC+AGG | + | chr6_1:4892802-4892821 | None:intergenic | 35.0% | |
| !! | GTTATTTTCATAAGCTGTCC+TGG | + | chr6_1:4892887-4892906 | None:intergenic | 35.0% |
| TAGAAGATGTTTGATCAGCA+TGG | + | chr6_1:4893083-4893102 | None:intergenic | 35.0% | |
| ! | TCAATGATGGTTTTCGAAGT+TGG | - | chr6_1:4893201-4893220 | Msa0870480:intron | 35.0% |
| AATCAGGAGAAAAGAAAGAG+AGG | - | chr6_1:4893373-4893392 | Msa0870480:intron | 35.0% | |
| GGAGTTGTTTATTATGGATC+CGG | + | chr6_1:4893426-4893445 | None:intergenic | 35.0% | |
| GTTATAATCACGATGAGTCA+AGG | - | chr6_1:4893456-4893475 | Msa0870480:intron | 35.0% | |
| !!! | GAGTCAAGGAATGGTTTTAA+CGG | - | chr6_1:4893470-4893489 | Msa0870480:intron | 35.0% |
| ! | ACTGTTTGCGTTTAAAGCAT+CGG | + | chr6_1:4893579-4893598 | None:intergenic | 35.0% |
| ACTTAACGAAGAAAGAGTTC+AGG | - | chr6_1:4893672-4893691 | Msa0870480:intron | 35.0% | |
| GTAACCACAAAATTGTACCT+TGG | - | chr6_1:4893816-4893835 | Msa0870480:intron | 35.0% | |
| ! | ATGACCAAGGTACAATTTTG+TGG | + | chr6_1:4893823-4893842 | None:intergenic | 35.0% |
| ACAAAATTGTACCTTGGTCA+TGG | - | chr6_1:4893822-4893841 | Msa0870480:intron | 35.0% | |
| ATTATTGTTCTCCATGACCA+AGG | + | chr6_1:4893836-4893855 | None:intergenic | 35.0% | |
| ! | TAACAGATAGGACATTGACT+AGG | + | chr6_1:4893866-4893885 | None:intergenic | 35.0% |
| TCTAAATCCTCGTAACAGAT+AGG | + | chr6_1:4893878-4893897 | None:intergenic | 35.0% | |
| ACACGAACAAGGAAGAAATT+CGG | + | chr6_1:4893912-4893931 | None:intergenic | 35.0% | |
| TTTCTCCTCCAAGAAGAAGA+GGG | - | chr6_1:4891716-4891735 | Msa0870480:CDS | 40.0% | |
| !! | TTAGCTTAGTTAGTCTTGGC+AGG | - | chr6_1:4892639-4892658 | Msa0870480:intron | 40.0% |
| !! | TAGCTTAGTTAGTCTTGGCA+GGG | - | chr6_1:4892640-4892659 | Msa0870480:intron | 40.0% |
| !!! | TTTAGGTTTTAGGCCCTGTT+TGG | - | chr6_1:4892728-4892747 | Msa0870480:intron | 40.0% |
| !!! | TTTGTCTTTTAGGGCCTGTT+TGG | - | chr6_1:4892785-4892804 | Msa0870480:intron | 40.0% |
| CTTACTTCCAAAAGATCTCC+AGG | - | chr6_1:4892866-4892885 | Msa0870480:intron | 40.0% | |
| !! | TATTGCAGTAAGGCCTTGTT+TGG | + | chr6_1:4893026-4893045 | None:intergenic | 40.0% |
| ! | CAAATCTTTTCCTCGCTAGA+CGG | - | chr6_1:4893051-4893070 | Msa0870480:intron | 40.0% |
| ! | AAATCTTTTCCTCGCTAGAC+GGG | - | chr6_1:4893052-4893071 | Msa0870480:intron | 40.0% |
| CTGATTTCCTTGTATGATGG+TGG | + | chr6_1:4893359-4893378 | None:intergenic | 40.0% | |
| CACCATCATACAAGGAAATC+AGG | - | chr6_1:4893357-4893376 | Msa0870480:intron | 40.0% | |
| CTCCTGATTTCCTTGTATGA+TGG | + | chr6_1:4893362-4893381 | None:intergenic | 40.0% | |
| AGGAGAAAAGAAAGAGAGGA+TGG | - | chr6_1:4893377-4893396 | Msa0870480:intron | 40.0% | |
| AATCACGATGAGTCAAGGAA+TGG | - | chr6_1:4893461-4893480 | Msa0870480:intron | 40.0% | |
| ! | AAGATGGATGCCTTGATGAT+TGG | - | chr6_1:4893543-4893562 | Msa0870480:intron | 40.0% |
| ! | AGATGGATGCCTTGATGATT+GGG | - | chr6_1:4893544-4893563 | Msa0870480:intron | 40.0% |
| AAACAGTAACGAGCATTCCA+TGG | - | chr6_1:4893592-4893611 | Msa0870480:CDS | 40.0% | |
| !! | TATAGGAGACTCTGAAACCA+TGG | + | chr6_1:4893612-4893631 | None:intergenic | 40.0% |
| CTCTTTCTTCGTTAAGTCCT+TGG | + | chr6_1:4893669-4893688 | None:intergenic | 40.0% | |
| ! | CAATTTTGTGGTTACTGTGC+CGG | + | chr6_1:4893811-4893830 | None:intergenic | 40.0% |
| TCAATGTCCTATCTGTTACG+AGG | - | chr6_1:4893868-4893887 | Msa0870480:intron | 40.0% | |
| GAATTTCTTCCTTGTTCGTG+TGG | - | chr6_1:4893911-4893930 | Msa0870480:intron | 40.0% | |
| AGATGAAATCCACACGAACA+AGG | + | chr6_1:4893923-4893942 | None:intergenic | 40.0% | |
| TTGTCACAAAAAGATCGTCG+AGG | - | chr6_1:4893952-4893971 | Msa0870480:intron | 40.0% | |
| ! | AGAAGAGCAACATAATGGGA+GGG | + | chr6_1:4894194-4894213 | None:intergenic | 40.0% |
| ! | AAGAAGAGCAACATAATGGG+AGG | + | chr6_1:4894195-4894214 | None:intergenic | 40.0% |
| AGGAGCCATTGAATGAAGGA+AGG | + | chr6_1:4891676-4891695 | None:intergenic | 45.0% | |
| TTCCTTCATTCAATGGCTCC+TGG | - | chr6_1:4891675-4891694 | Msa0870480:three_prime_UTR | 45.0% | |
| AACCAGGAGCCATTGAATGA+AGG | + | chr6_1:4891680-4891699 | None:intergenic | 45.0% | |
| TCTTCTTGGAGGAGAAAGGA+GGG | + | chr6_1:4891713-4891732 | None:intergenic | 45.0% | |
| TTCTTCTTGGAGGAGAAAGG+AGG | + | chr6_1:4891714-4891733 | None:intergenic | 45.0% | |
| CTCTTCTTCTTGGAGGAGAA+AGG | + | chr6_1:4891717-4891736 | None:intergenic | 45.0% | |
| CTTTCTCCTCCAAGAAGAAG+AGG | - | chr6_1:4891715-4891734 | Msa0870480:exon | 45.0% | |
| GTTTACCCTCTTCTTCTTGG+AGG | + | chr6_1:4891724-4891743 | None:intergenic | 45.0% | |
| AGGGTTTACCCTCTTCTTCT+TGG | + | chr6_1:4891727-4891746 | None:intergenic | 45.0% | |
| TTGATGTTAGGCGCGAACAA+TGG | - | chr6_1:4892232-4892251 | Msa0870480:CDS | 45.0% | |
| ! | AAGCTGTCCTGGAGATCTTT+TGG | + | chr6_1:4892876-4892895 | None:intergenic | 45.0% |
| !! | CGATGTTGACTCAACTGGAA+GGG | - | chr6_1:4893289-4893308 | Msa0870480:intron | 45.0% |
| CTCGCAATGTGCTTAGAAGA+TGG | + | chr6_1:4893326-4893345 | None:intergenic | 45.0% | |
| GGAGAATCCACCATCATACA+AGG | - | chr6_1:4893349-4893368 | Msa0870480:intron | 45.0% | |
| TGCATCCAAGCGAATGATTC+CGG | - | chr6_1:4893404-4893423 | Msa0870480:intron | 45.0% | |
| ! | AGTACGAGTACGTTTTCCTC+AGG | - | chr6_1:4893506-4893525 | Msa0870480:intron | 45.0% |
| TTCCTCAGGAGATCTCAATG+AGG | - | chr6_1:4893520-4893539 | Msa0870480:intron | 45.0% | |
| TTCCTCATTGAGATCTCCTG+AGG | + | chr6_1:4893525-4893544 | None:intergenic | 45.0% | |
| GGAGATCTCAATGAGGAAGA+TGG | - | chr6_1:4893527-4893546 | Msa0870480:intron | 45.0% | |
| !! | TGCGTTTAAAGCATCGGCAA+CGG | + | chr6_1:4893573-4893592 | None:intergenic | 45.0% |
| CACATATTAGCTGTCGAGCA+TGG | - | chr6_1:4893711-4893730 | Msa0870480:intron | 45.0% | |
| AAAAAGATCGTCGAGGCTGA+TGG | - | chr6_1:4893959-4893978 | Msa0870480:intron | 45.0% | |
| AGTCATGCCGTATGAGTACA+GGG | - | chr6_1:4894068-4894087 | Msa0870480:intron | 45.0% | |
| !! | AAAATGAATAAAAATTAAAA+AGG | + | chr6_1:4891753-4891772 | None:intergenic | 5.0% |
| AGAGAGGAGGAGGATAGAGA+GGG | + | chr6_1:4891619-4891638 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | + | chr6_1:4891633-4891652 | None:intergenic | 50.0% | |
| GGAGAAAGGAGGGTCAGAAA+TGG | + | chr6_1:4891703-4891722 | None:intergenic | 50.0% | |
| CGCGAACAATGGCTTTCTAG+AGG | - | chr6_1:4892243-4892262 | Msa0870480:CDS | 50.0% | |
| !! | AGTTAGTCTTGGCAGGGACA+TGG | - | chr6_1:4892646-4892665 | Msa0870480:intron | 50.0% |
| !! | GGATGCGATGTTGACTCAAC+TGG | - | chr6_1:4893284-4893303 | Msa0870480:intron | 50.0% |
| !! | GCGATGTTGACTCAACTGGA+AGG | - | chr6_1:4893288-4893307 | Msa0870480:intron | 50.0% |
| TTCTAAGCACATTGCGAGCG+AGG | - | chr6_1:4893328-4893347 | Msa0870480:intron | 50.0% | |
| TGGATCCGGAATCATTCGCT+TGG | + | chr6_1:4893412-4893431 | None:intergenic | 50.0% | |
| ! | TGGATGCCTTGATGATTGGG+AGG | - | chr6_1:4893547-4893566 | Msa0870480:intron | 50.0% |
| !! | CGTTGATTCAGAAGCAGCCA+AGG | - | chr6_1:4893649-4893668 | Msa0870480:intron | 50.0% |
| !! | CTTGGACGAAGAGTGTCATC+GGG | + | chr6_1:4893740-4893759 | None:intergenic | 50.0% |
| !! | CCTTGGACGAAGAGTGTCAT+CGG | + | chr6_1:4893741-4893760 | None:intergenic | 50.0% |
| !! | TTATGCGGCTTTGAGAGGTC+GGG | + | chr6_1:4893770-4893789 | None:intergenic | 50.0% |
| !! | GTTATGCGGCTTTGAGAGGT+CGG | + | chr6_1:4893771-4893790 | None:intergenic | 50.0% |
| !! | GAGAGTTATGCGGCTTTGAG+AGG | + | chr6_1:4893775-4893794 | None:intergenic | 50.0% |
| CAGTCATGCCGTATGAGTAC+AGG | - | chr6_1:4894067-4894086 | Msa0870480:intron | 50.0% | |
| CCTAGCACCCTGTACTCATA+CGG | + | chr6_1:4894078-4894097 | None:intergenic | 50.0% | |
| GAGAGAGGAGGAGGATAGAG+AGG | + | chr6_1:4891620-4891639 | None:intergenic | 55.0% | |
| AGAGAGAGAGAGAGAGGAGG+AGG | + | chr6_1:4891629-4891648 | None:intergenic | 55.0% | |
| GAGAGAGAGAGAGAGAGAGG+AGG | + | chr6_1:4891632-4891651 | None:intergenic | 55.0% | |
| GGAGGGTCAGAAATGGAACC+AGG | + | chr6_1:4891696-4891715 | None:intergenic | 55.0% | |
| ATGGCTAATCCCGTCTAGCG+AGG | + | chr6_1:4893064-4893083 | None:intergenic | 55.0% | |
| CAACGGCCTCCCAATCATCA+AGG | + | chr6_1:4893556-4893575 | None:intergenic | 55.0% | |
| CCGATGACACTCTTCGTCCA+AGG | - | chr6_1:4893738-4893757 | Msa0870480:intron | 55.0% | |
| ! | CCGTATGAGTACAGGGTGCT+AGG | - | chr6_1:4894075-4894094 | Msa0870480:CDS | 55.0% |
| GGAGGAGGATAGAGAGGGAG+TGG | + | chr6_1:4891614-4891633 | None:intergenic | 60.0% | |
| GAGAGGTCGGGCAAACACCT+TGG | + | chr6_1:4893758-4893777 | None:intergenic | 60.0% | |
| ! | CGAGGCTGATGGACGATGTC+CGG | - | chr6_1:4893970-4893989 | Msa0870480:intron | 60.0% |
| ! | GAGGCTGATGGACGATGTCC+GGG | - | chr6_1:4893971-4893990 | Msa0870480:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 4891593 | 4894219 | 4891593 | ID=Msa0870480;Name=Msa0870480 |
| chr6_1 | mRNA | 4891593 | 4894219 | 4891593 | ID=Msa0870480-mRNA-1;Parent=Msa0870480;Name=Msa0870480-mRNA-1;_AED=0.00;_eAED=0.00;_QI=94|1|1|1|1|1|3|123|312 |
| chr6_1 | exon | 4891593 | 4892536 | 4891593 | ID=Msa0870480-mRNA-1:exon:1573;Parent=Msa0870480-mRNA-1 |
| chr6_1 | exon | 4893548 | 4893614 | 4893548 | ID=Msa0870480-mRNA-1:exon:1572;Parent=Msa0870480-mRNA-1 |
| chr6_1 | exon | 4894075 | 4894219 | 4894075 | ID=Msa0870480-mRNA-1:exon:1571;Parent=Msa0870480-mRNA-1 |
| chr6_1 | five_prime_UTR | 4894126 | 4894219 | 4894126 | ID=Msa0870480-mRNA-1:five_prime_utr;Parent=Msa0870480-mRNA-1 |
| chr6_1 | CDS | 4894075 | 4894125 | 4894075 | ID=Msa0870480-mRNA-1:cds;Parent=Msa0870480-mRNA-1 |
| chr6_1 | CDS | 4893548 | 4893614 | 4893548 | ID=Msa0870480-mRNA-1:cds;Parent=Msa0870480-mRNA-1 |
| chr6_1 | CDS | 4891716 | 4892536 | 4891716 | ID=Msa0870480-mRNA-1:cds;Parent=Msa0870480-mRNA-1 |
| chr6_1 | three_prime_UTR | 4891593 | 4891715 | 4891593 | ID=Msa0870480-mRNA-1:three_prime_utr;Parent=Msa0870480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
