Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0596880 | XP_039689391.1 | 96.991 | 432 | 13 | 0 | 3 | 434 | 1 | 432 | 0.0 | 869 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0596880 | sp|Q9KUX9|DUSA_VIBCH | 43.519 | 324 | 174 | 5 | 71 | 394 | 7 | 321 | 1.67e-85 | 267 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001510 | Msa0596880 | 0.836388 | 9.638515e-57 | -8.615850e-47 |
| Msa0004180 | Msa0596880 | 0.828093 | 1.088735e-54 | -8.615850e-47 |
| Msa0007570 | Msa0596880 | 0.826013 | 3.423434e-54 | -8.615850e-47 |
| Msa0015220 | Msa0596880 | 0.800624 | 1.320656e-48 | -8.615850e-47 |
| Msa0016380 | Msa0596880 | 0.813382 | 2.632809e-51 | -8.615850e-47 |
| Msa0027030 | Msa0596880 | 0.816684 | 4.871598e-52 | -8.615850e-47 |
| Msa0038150 | Msa0596880 | 0.803396 | 3.556535e-49 | -8.615850e-47 |
| Msa0038750 | Msa0596880 | 0.835235 | 1.888164e-56 | -8.615850e-47 |
| Msa0042210 | Msa0596880 | 0.803041 | 4.212491e-49 | -8.615850e-47 |
| Msa0046020 | Msa0596880 | 0.804891 | 1.737574e-49 | -8.615850e-47 |
| Msa0047660 | Msa0596880 | 0.819802 | 9.593069e-53 | -8.615850e-47 |
| Msa0053360 | Msa0596880 | 0.802429 | 5.633799e-49 | -8.615850e-47 |
| Msa0064490 | Msa0596880 | 0.807213 | 5.640157e-50 | -8.615850e-47 |
| Msa0065520 | Msa0596880 | 0.822375 | 2.450257e-53 | -8.615850e-47 |
| Msa0070580 | Msa0596880 | 0.804213 | 2.406536e-49 | -8.615850e-47 |
| Msa0075080 | Msa0596880 | 0.809010 | 2.337521e-50 | -8.615850e-47 |
| Msa0076590 | Msa0596880 | 0.843821 | 1.107125e-58 | -8.615850e-47 |
| Msa0077990 | Msa0596880 | 0.802314 | 5.950260e-49 | -8.615850e-47 |
| Msa0078160 | Msa0596880 | 0.814292 | 1.659673e-51 | -8.615850e-47 |
| Msa0078170 | Msa0596880 | 0.810700 | 1.011740e-50 | -8.615850e-47 |
| Msa0079100 | Msa0596880 | 0.839619 | 1.421630e-57 | -8.615850e-47 |
| Msa0081790 | Msa0596880 | 0.812310 | 4.520365e-51 | -8.615850e-47 |
| Msa0086620 | Msa0596880 | 0.803346 | 3.643036e-49 | -8.615850e-47 |
| Msa0089470 | Msa0596880 | 0.819720 | 1.001523e-52 | -8.615850e-47 |
| Msa0093360 | Msa0596880 | 0.804133 | 2.500625e-49 | -8.615850e-47 |
| Msa0122170 | Msa0596880 | 0.805242 | 1.467009e-49 | -8.615850e-47 |
| Msa0122930 | Msa0596880 | 0.818193 | 2.227440e-52 | -8.615850e-47 |
| Msa0127510 | Msa0596880 | 0.829104 | 6.205281e-55 | -8.615850e-47 |
| Msa0140870 | Msa0596880 | 0.804707 | 1.898242e-49 | -8.615850e-47 |
| Msa0160080 | Msa0596880 | 0.815753 | 7.867491e-52 | -8.615850e-47 |
| Msa0164310 | Msa0596880 | 0.810557 | 1.086467e-50 | -8.615850e-47 |
| Msa0167150 | Msa0596880 | 0.832133 | 1.124642e-55 | -8.615850e-47 |
| Msa0167570 | Msa0596880 | 0.812870 | 3.409672e-51 | -8.615850e-47 |
| Msa0168470 | Msa0596880 | 0.809599 | 1.747524e-50 | -8.615850e-47 |
| Msa0175240 | Msa0596880 | 0.809361 | 1.965733e-50 | -8.615850e-47 |
| Msa0178440 | Msa0596880 | 0.822620 | 2.148497e-53 | -8.615850e-47 |
| Msa0182940 | Msa0596880 | 0.828073 | 1.101192e-54 | -8.615850e-47 |
| Msa0185540 | Msa0596880 | 0.817711 | 2.861971e-52 | -8.615850e-47 |
| Msa0186400 | Msa0596880 | 0.801316 | 9.538824e-49 | -8.615850e-47 |
| Msa0190470 | Msa0596880 | 0.825855 | 3.733999e-54 | -8.615850e-47 |
| Msa0211590 | Msa0596880 | 0.830652 | 2.603201e-55 | -8.615850e-47 |
| Msa0211600 | Msa0596880 | 0.824529 | 7.684349e-54 | -8.615850e-47 |
| Msa0213590 | Msa0596880 | 0.818177 | 2.245851e-52 | -8.615850e-47 |
| Msa0225080 | Msa0596880 | 0.822332 | 2.507001e-53 | -8.615850e-47 |
| Msa0229350 | Msa0596880 | 0.804088 | 2.554294e-49 | -8.615850e-47 |
| Msa0237690 | Msa0596880 | 0.807451 | 5.021480e-50 | -8.615850e-47 |
| Msa0369080 | Msa0596880 | 0.820409 | 6.965756e-53 | -8.615850e-47 |
| Msa0371010 | Msa0596880 | 0.819229 | 1.296229e-52 | -8.615850e-47 |
| Msa0373640 | Msa0596880 | 0.807229 | 5.598730e-50 | -8.615850e-47 |
| Msa0375570 | Msa0596880 | 0.808115 | 3.629961e-50 | -8.615850e-47 |
| Msa0377990 | Msa0596880 | 0.825758 | 3.935565e-54 | -8.615850e-47 |
| Msa0379360 | Msa0596880 | 0.802693 | 4.969829e-49 | -8.615850e-47 |
| Msa0380470 | Msa0596880 | 0.817808 | 2.721210e-52 | -8.615850e-47 |
| Msa0386230 | Msa0596880 | 0.815278 | 1.003516e-51 | -8.615850e-47 |
| Msa0397420 | Msa0596880 | 0.800589 | 1.342826e-48 | -8.615850e-47 |
| Msa0402490 | Msa0596880 | 0.800741 | 1.250219e-48 | -8.615850e-47 |
| Msa0403740 | Msa0596880 | 0.809095 | 2.241138e-50 | -8.615850e-47 |
| Msa0416430 | Msa0596880 | 0.805036 | 1.620546e-49 | -8.615850e-47 |
| Msa0419150 | Msa0596880 | 0.814934 | 1.196375e-51 | -8.615850e-47 |
| Msa0424220 | Msa0596880 | 0.813422 | 2.580641e-51 | -8.615850e-47 |
| Msa0427230 | Msa0596880 | 0.804873 | 1.752379e-49 | -8.615850e-47 |
| Msa0427600 | Msa0596880 | 0.816699 | 4.832481e-52 | -8.615850e-47 |
| Msa0428280 | Msa0596880 | 0.813542 | 2.428626e-51 | -8.615850e-47 |
| Msa0428870 | Msa0596880 | 0.808217 | 3.451663e-50 | -8.615850e-47 |
| Msa0429990 | Msa0596880 | 0.803221 | 3.866696e-49 | -8.615850e-47 |
| Msa0431270 | Msa0596880 | 0.802521 | 5.394229e-49 | -8.615850e-47 |
| Msa0431550 | Msa0596880 | 0.813161 | 2.945060e-51 | -8.615850e-47 |
| Msa0436660 | Msa0596880 | 0.830861 | 2.313406e-55 | -8.615850e-47 |
| Msa0437820 | Msa0596880 | 0.810240 | 1.271869e-50 | -8.615850e-47 |
| Msa0440720 | Msa0596880 | 0.837456 | 5.143783e-57 | -8.615850e-47 |
| Msa0446110 | Msa0596880 | 0.810138 | 1.337925e-50 | -8.615850e-47 |
| Msa0450230 | Msa0596880 | 0.803695 | 3.082915e-49 | -8.615850e-47 |
| Msa0450890 | Msa0596880 | 0.819104 | 1.383986e-52 | -8.615850e-47 |
| Msa0450920 | Msa0596880 | 0.805115 | 1.559773e-49 | -8.615850e-47 |
| Msa0453610 | Msa0596880 | 0.831884 | 1.295958e-55 | -8.615850e-47 |
| Msa0455890 | Msa0596880 | 0.818944 | 1.504873e-52 | -8.615850e-47 |
| Msa0456450 | Msa0596880 | 0.811106 | 8.263617e-51 | -8.615850e-47 |
| Msa0457070 | Msa0596880 | 0.805196 | 1.500519e-49 | -8.615850e-47 |
| Msa0464980 | Msa0596880 | 0.808838 | 2.543778e-50 | -8.615850e-47 |
| Msa0469770 | Msa0596880 | 0.855098 | 7.923553e-62 | -8.615850e-47 |
| Msa0469840 | Msa0596880 | 0.820537 | 6.507832e-53 | -8.615850e-47 |
| Msa0471130 | Msa0596880 | 0.819235 | 1.292208e-52 | -8.615850e-47 |
| Msa0473740 | Msa0596880 | 0.808079 | 3.694343e-50 | -8.615850e-47 |
| Msa0474660 | Msa0596880 | 0.812377 | 4.371164e-51 | -8.615850e-47 |
| Msa0476140 | Msa0596880 | 0.817338 | 3.473084e-52 | -8.615850e-47 |
| Msa0476560 | Msa0596880 | 0.812332 | 4.471968e-51 | -8.615850e-47 |
| Msa0246510 | Msa0596880 | 0.811572 | 6.547073e-51 | -8.615850e-47 |
| Msa0255770 | Msa0596880 | 0.805502 | 1.294528e-49 | -8.615850e-47 |
| Msa0259450 | Msa0596880 | 0.819756 | 9.824659e-53 | -8.615850e-47 |
| Msa0259570 | Msa0596880 | 0.833003 | 6.842631e-56 | -8.615850e-47 |
| Msa0266150 | Msa0596880 | 0.814739 | 1.321725e-51 | -8.615850e-47 |
| Msa0266330 | Msa0596880 | 0.806881 | 6.632186e-50 | -8.615850e-47 |
| Msa0269430 | Msa0596880 | 0.801488 | 8.794341e-49 | -8.615850e-47 |
| Msa0271970 | Msa0596880 | 0.819678 | 1.023748e-52 | -8.615850e-47 |
| Msa0273780 | Msa0596880 | 0.817382 | 3.394995e-52 | -8.615850e-47 |
| Msa0285510 | Msa0596880 | 0.812028 | 5.209495e-51 | -8.615850e-47 |
| Msa0292060 | Msa0596880 | 0.832881 | 7.338277e-56 | -8.615850e-47 |
| Msa0298820 | Msa0596880 | 0.811613 | 6.414898e-51 | -8.615850e-47 |
| Msa0305630 | Msa0596880 | 0.820663 | 6.089246e-53 | -8.615850e-47 |
| Msa0309490 | Msa0596880 | 0.813292 | 2.755149e-51 | -8.615850e-47 |
| Msa0317820 | Msa0596880 | 0.813395 | 2.616085e-51 | -8.615850e-47 |
| Msa0319340 | Msa0596880 | 0.810216 | 1.287071e-50 | -8.615850e-47 |
| Msa0330240 | Msa0596880 | 0.823148 | 1.618578e-53 | -8.615850e-47 |
| Msa0331070 | Msa0596880 | 0.804833 | 1.786689e-49 | -8.615850e-47 |
| Msa0340700 | Msa0596880 | 0.802278 | 6.053471e-49 | -8.615850e-47 |
| Msa0341950 | Msa0596880 | 0.810046 | 1.400375e-50 | -8.615850e-47 |
| Msa0346050 | Msa0596880 | 0.829784 | 4.239861e-55 | -8.615850e-47 |
| Msa0363090 | Msa0596880 | 0.816413 | 5.603120e-52 | -8.615850e-47 |
| Msa0364030 | Msa0596880 | 0.808674 | 2.758096e-50 | -8.615850e-47 |
| Msa0484590 | Msa0596880 | 0.827938 | 1.186590e-54 | -8.615850e-47 |
| Msa0485210 | Msa0596880 | 0.816991 | 4.157205e-52 | -8.615850e-47 |
| Msa0485260 | Msa0596880 | 0.843503 | 1.345900e-58 | -8.615850e-47 |
| Msa0487480 | Msa0596880 | 0.814053 | 1.874185e-51 | -8.615850e-47 |
| Msa0490740 | Msa0596880 | 0.817467 | 3.248908e-52 | -8.615850e-47 |
| Msa0492330 | Msa0596880 | 0.810046 | 1.400375e-50 | -8.615850e-47 |
| Msa0500580 | Msa0596880 | 0.814700 | 1.348120e-51 | -8.615850e-47 |
| Msa0504360 | Msa0596880 | 0.822660 | 2.103840e-53 | -8.615850e-47 |
| Msa0506700 | Msa0596880 | 0.825968 | 3.509418e-54 | -8.615850e-47 |
| Msa0511040 | Msa0596880 | 0.804951 | 1.688325e-49 | -8.615850e-47 |
| Msa0512930 | Msa0596880 | 0.815250 | 1.017974e-51 | -8.615850e-47 |
| Msa0517820 | Msa0596880 | 0.806596 | 7.617023e-50 | -8.615850e-47 |
| Msa0518150 | Msa0596880 | 0.818883 | 1.553712e-52 | -8.615850e-47 |
| Msa0519070 | Msa0596880 | 0.801688 | 8.000937e-49 | -8.615850e-47 |
| Msa0519090 | Msa0596880 | 0.804188 | 2.434796e-49 | -8.615850e-47 |
| Msa0520480 | Msa0596880 | 0.825454 | 4.646135e-54 | -8.615850e-47 |
| Msa0525180 | Msa0596880 | 0.811602 | 6.450075e-51 | -8.615850e-47 |
| Msa0537960 | Msa0596880 | 0.813472 | 2.516316e-51 | -8.615850e-47 |
| Msa0538020 | Msa0596880 | 0.833599 | 4.861525e-56 | -8.615850e-47 |
| Msa0549700 | Msa0596880 | 0.815335 | 9.747231e-52 | -8.615850e-47 |
| Msa0557440 | Msa0596880 | 0.803251 | 3.810864e-49 | -8.615850e-47 |
| Msa0566090 | Msa0596880 | 0.810676 | 1.024120e-50 | -8.615850e-47 |
| Msa0576480 | Msa0596880 | 0.817284 | 3.571503e-52 | -8.615850e-47 |
| Msa0580410 | Msa0596880 | 0.820676 | 6.048391e-53 | -8.615850e-47 |
| Msa0580890 | Msa0596880 | 0.817183 | 3.763688e-52 | -8.615850e-47 |
| Msa0583270 | Msa0596880 | 0.810710 | 1.006546e-50 | -8.615850e-47 |
| Msa0585720 | Msa0596880 | 0.804669 | 1.933030e-49 | -8.615850e-47 |
| Msa0596880 | Msa0598470 | 0.811973 | 5.355399e-51 | -8.615850e-47 |
| Msa0596880 | Msa0602360 | 0.800341 | 1.508587e-48 | -8.615850e-47 |
| Msa0596880 | Msa0605210 | 0.816995 | 4.147407e-52 | -8.615850e-47 |
| Msa0596880 | Msa0608720 | 0.811229 | 7.771033e-51 | -8.615850e-47 |
| Msa0596880 | Msa0616570 | 0.823368 | 1.438584e-53 | -8.615850e-47 |
| Msa0596880 | Msa0619450 | 0.811396 | 7.149199e-51 | -8.615850e-47 |
| Msa0596880 | Msa0619530 | 0.807659 | 4.536514e-50 | -8.615850e-47 |
| Msa0596880 | Msa0619690 | 0.835777 | 1.377475e-56 | -8.615850e-47 |
| Msa0596880 | Msa0619960 | 0.810661 | 1.031871e-50 | -8.615850e-47 |
| Msa0596880 | Msa0620050 | 0.807738 | 4.364616e-50 | -8.615850e-47 |
| Msa0596880 | Msa0625820 | 0.809656 | 1.698402e-50 | -8.615850e-47 |
| Msa0596880 | Msa0625850 | 0.813431 | 2.568175e-51 | -8.615850e-47 |
| Msa0596880 | Msa0625900 | 0.812201 | 4.776262e-51 | -8.615850e-47 |
| Msa0596880 | Msa0630910 | 0.805108 | 1.565463e-49 | -8.615850e-47 |
| Msa0596880 | Msa0634900 | 0.809837 | 1.553280e-50 | -8.615850e-47 |
| Msa0596880 | Msa0638300 | 0.818385 | 2.014648e-52 | -8.615850e-47 |
| Msa0596880 | Msa0644220 | 0.818260 | 2.150651e-52 | -8.615850e-47 |
| Msa0596880 | Msa0646310 | 0.800837 | 1.194843e-48 | -8.615850e-47 |
| Msa0596880 | Msa0655980 | 0.822867 | 1.882453e-53 | -8.615850e-47 |
| Msa0596880 | Msa0659580 | 0.810118 | 1.351381e-50 | -8.615850e-47 |
| Msa0596880 | Msa0661540 | 0.817225 | 3.682711e-52 | -8.615850e-47 |
| Msa0596880 | Msa0662140 | 0.800309 | 1.531304e-48 | -8.615850e-47 |
| Msa0596880 | Msa0663580 | 0.801257 | 9.804055e-49 | -8.615850e-47 |
| Msa0596880 | Msa0663690 | 0.813119 | 3.007555e-51 | -8.615850e-47 |
| Msa0596880 | Msa0673620 | 0.809582 | 1.761734e-50 | -8.615850e-47 |
| Msa0596880 | Msa0676570 | 0.801218 | 9.986094e-49 | -8.615850e-47 |
| Msa0596880 | Msa0677250 | 0.849661 | 2.801715e-60 | -8.615850e-47 |
| Msa0596880 | Msa0681100 | 0.818221 | 2.194745e-52 | -8.615850e-47 |
| Msa0596880 | Msa0681190 | 0.805608 | 1.229651e-49 | -8.615850e-47 |
| Msa0596880 | Msa0683610 | 0.804884 | 1.743053e-49 | -8.615850e-47 |
| Msa0596880 | Msa0684030 | 0.826560 | 2.537110e-54 | -8.615850e-47 |
| Msa0596880 | Msa0693050 | 0.805958 | 1.038275e-49 | -8.615850e-47 |
| Msa0596880 | Msa0695250 | 0.803191 | 3.922260e-49 | -8.615850e-47 |
| Msa0596880 | Msa0699200 | 0.827969 | 1.166567e-54 | -8.615850e-47 |
| Msa0596880 | Msa0699900 | 0.822990 | 1.762405e-53 | -8.615850e-47 |
| Msa0596880 | Msa0704790 | 0.805594 | 1.237914e-49 | -8.615850e-47 |
| Msa0596880 | Msa0707860 | 0.805309 | 1.420534e-49 | -8.615850e-47 |
| Msa0596880 | Msa0713570 | 0.819069 | 1.409571e-52 | -8.615850e-47 |
| Msa0596880 | Msa0714230 | 0.829908 | 3.955607e-55 | -8.615850e-47 |
| Msa0596880 | Msa0717540 | 0.801168 | 1.022592e-48 | -8.615850e-47 |
| Msa0596880 | Msa0719330 | 0.820803 | 5.656083e-53 | -8.615850e-47 |
| Msa0596880 | Msa0729740 | 0.813225 | 2.850994e-51 | -8.615850e-47 |
| Msa0596880 | Msa0730250 | 0.801424 | 9.061672e-49 | -8.615850e-47 |
| Msa0596880 | Msa0745010 | 0.830794 | 2.402725e-55 | -8.615850e-47 |
| Msa0596880 | Msa0745270 | 0.827579 | 1.447311e-54 | -8.615850e-47 |
| Msa0596880 | Msa0748470 | 0.803682 | 3.103284e-49 | -8.615850e-47 |
| Msa0596880 | Msa0750200 | 0.812589 | 3.929653e-51 | -8.615850e-47 |
| Msa0596880 | Msa0755550 | 0.822065 | 2.891284e-53 | -8.615850e-47 |
| Msa0596880 | Msa0758880 | 0.818264 | 2.146420e-52 | -8.615850e-47 |
| Msa0596880 | Msa0766910 | 0.816162 | 6.375003e-52 | -8.615850e-47 |
| Msa0596880 | Msa0770540 | 0.828400 | 9.181653e-55 | -8.615850e-47 |
| Msa0596880 | Msa0772160 | 0.827314 | 1.674924e-54 | -8.615850e-47 |
| Msa0596880 | Msa0774360 | 0.800308 | 1.531924e-48 | -8.615850e-47 |
| Msa0596880 | Msa0784780 | 0.811661 | 6.263079e-51 | -8.615850e-47 |
| Msa0596880 | Msa0790650 | 0.817901 | 2.592568e-52 | -8.615850e-47 |
| Msa0596880 | Msa0793130 | 0.801766 | 7.711100e-49 | -8.615850e-47 |
| Msa0596880 | Msa0795910 | 0.819586 | 1.074467e-52 | -8.615850e-47 |
| Msa0596880 | Msa0797180 | 0.813298 | 2.747620e-51 | -8.615850e-47 |
| Msa0596880 | Msa0799150 | 0.801486 | 8.801136e-49 | -8.615850e-47 |
| Msa0596880 | Msa0801920 | 0.822498 | 2.293707e-53 | -8.615850e-47 |
| Msa0596880 | Msa0827340 | 0.805661 | 1.198843e-49 | -8.615850e-47 |
| Msa0596880 | Msa0828730 | 0.807991 | 3.856735e-50 | -8.615850e-47 |
| Msa0596880 | Msa0829250 | 0.801361 | 9.338188e-49 | -8.615850e-47 |
| Msa0596880 | Msa0833030 | 0.801812 | 7.544636e-49 | -8.615850e-47 |
| Msa0596880 | Msa0833360 | 0.828364 | 9.369043e-55 | -8.615850e-47 |
| Msa0596880 | Msa0835050 | 0.813911 | 2.013727e-51 | -8.615850e-47 |
| Msa0596880 | Msa0838120 | 0.819923 | 9.001540e-53 | -8.615850e-47 |
| Msa0596880 | Msa0853200 | 0.803496 | 3.391614e-49 | -8.615850e-47 |
| Msa0596880 | Msa0860630 | 0.802203 | 6.271974e-49 | -8.615850e-47 |
| Msa0596880 | Msa0862960 | 0.819821 | 9.494445e-53 | -8.615850e-47 |
| Msa0596880 | Msa0868500 | 0.811167 | 8.016694e-51 | -8.615850e-47 |
| Msa0596880 | Msa0868510 | 0.815688 | 8.131140e-52 | -8.615850e-47 |
| Msa0596880 | Msa0868520 | 0.813982 | 1.942898e-51 | -8.615850e-47 |
| Msa0596880 | Msa0876680 | 0.809331 | 1.995301e-50 | -8.615850e-47 |
| Msa0596880 | Msa0911710 | 0.800647 | 1.306300e-48 | -8.615850e-47 |
| Msa0596880 | Msa0941410 | 0.819653 | 1.037300e-52 | -8.615850e-47 |
| Msa0596880 | Msa0941420 | 0.821947 | 3.079781e-53 | -8.615850e-47 |
| Msa0596880 | Msa0945160 | 0.803516 | 3.359144e-49 | -8.615850e-47 |
| Msa0596880 | Msa0958960 | 0.819146 | 1.353959e-52 | -8.615850e-47 |
| Msa0596880 | Msa0968060 | 0.822134 | 2.785944e-53 | -8.615850e-47 |
| Msa0596880 | Msa0975440 | 0.808931 | 2.429813e-50 | -8.615850e-47 |
| Msa0596880 | Msa0978540 | 0.828366 | 9.356871e-55 | -8.615850e-47 |
| Msa0596880 | Msa0978550 | 0.814969 | 1.175018e-51 | -8.615850e-47 |
| Msa0596880 | Msa0978560 | 0.813375 | 2.642894e-51 | -8.615850e-47 |
| Msa0596880 | Msa0984230 | 0.807831 | 4.171813e-50 | -8.615850e-47 |
| Msa0596880 | Msa0995130 | 0.835754 | 1.395872e-56 | -8.615850e-47 |
| Msa0596880 | Msa1002550 | 0.811265 | 7.632861e-51 | -8.615850e-47 |
| Msa0596880 | Msa1004300 | 0.814973 | 1.172752e-51 | -8.615850e-47 |
| Msa0596880 | Msa1005370 | -0.800378 | 1.482096e-48 | -8.615850e-47 |
| Msa0596880 | Msa1020160 | 0.828429 | 9.035674e-55 | -8.615850e-47 |
| Msa0596880 | Msa1028890 | 0.803371 | 3.599529e-49 | -8.615850e-47 |
| Msa0596880 | Msa1031190 | 0.825646 | 4.185567e-54 | -8.615850e-47 |
| Msa0596880 | Msa1031620 | 0.803935 | 2.748943e-49 | -8.615850e-47 |
| Msa0596880 | Msa1036260 | 0.816126 | 6.493894e-52 | -8.615850e-47 |
| Msa0596880 | Msa1037440 | 0.819948 | 8.882919e-53 | -8.615850e-47 |
| Msa0596880 | Msa1044050 | 0.824658 | 7.164242e-54 | -8.615850e-47 |
| Msa0596880 | Msa1045750 | 0.806318 | 8.717548e-50 | -8.615850e-47 |
| Msa0596880 | Msa1047300 | -0.823304 | 1.488520e-53 | -8.615850e-47 |
| Msa0596880 | Msa1047340 | -0.822802 | 1.949043e-53 | -8.615850e-47 |
| Msa0596880 | Msa1066790 | 0.808315 | 3.290583e-50 | -8.615850e-47 |
| Msa0596880 | Msa1066980 | 0.806505 | 7.962875e-50 | -8.615850e-47 |
| Msa0596880 | Msa1070370 | 0.823658 | 1.230189e-53 | -8.615850e-47 |
| Msa0596880 | Msa1078770 | 0.802340 | 5.878218e-49 | -8.615850e-47 |
| Msa0596880 | Msa1095880 | 0.816699 | 4.832224e-52 | -8.615850e-47 |
| Msa0596880 | Msa1106730 | 0.814305 | 1.648159e-51 | -8.615850e-47 |
| Msa0596880 | Msa1118890 | 0.805870 | 1.083159e-49 | -8.615850e-47 |
| Msa0596880 | Msa1119420 | 0.821552 | 3.799327e-53 | -8.615850e-47 |
| Msa0596880 | Msa1123260 | 0.803585 | 3.249792e-49 | -8.615850e-47 |
| Msa0596880 | Msa1129510 | 0.809771 | 1.604402e-50 | -8.615850e-47 |
| Msa0596880 | Msa1130150 | 0.803264 | 3.788054e-49 | -8.615850e-47 |
| Msa0596880 | Msa1132880 | 0.818687 | 1.720962e-52 | -8.615850e-47 |
| Msa0596880 | Msa1156430 | 0.815184 | 1.052639e-51 | -8.615850e-47 |
| Msa0596880 | Msa1158180 | 0.825561 | 4.382832e-54 | -8.615850e-47 |
| Msa0596880 | Msa1163130 | 0.810353 | 1.202238e-50 | -8.615850e-47 |
| Msa0596880 | Msa1163230 | 0.802092 | 6.608421e-49 | -8.615850e-47 |
| Msa0596880 | Msa1169600 | 0.811805 | 5.824656e-51 | -8.615850e-47 |
| Msa0596880 | Msa1184100 | 0.802658 | 5.053797e-49 | -8.615850e-47 |
| Msa0596880 | Msa1191530 | 0.801532 | 8.612645e-49 | -8.615850e-47 |
| Msa0596880 | Msa1191960 | 0.800069 | 1.713422e-48 | -8.615850e-47 |
| Msa0596880 | Msa1199540 | 0.805198 | 1.498521e-49 | -8.615850e-47 |
| Msa0596880 | Msa1202220 | 0.802288 | 6.024627e-49 | -8.615850e-47 |
| Msa0596880 | Msa1203320 | 0.827075 | 1.911147e-54 | -8.615850e-47 |
| Msa0596880 | Msa1204900 | 0.802880 | 4.548377e-49 | -8.615850e-47 |
| Msa0596880 | Msa1206500 | 0.812327 | 4.483309e-51 | -8.615850e-47 |
| Msa0596880 | Msa1222900 | 0.833639 | 4.751434e-56 | -8.615850e-47 |
| Msa0596880 | Msa1228260 | 0.804143 | 2.488583e-49 | -8.615850e-47 |
| Msa0596880 | Msa1247200 | 0.813705 | 2.236163e-51 | -8.615850e-47 |
| Msa0596880 | Msa1252210 | 0.802295 | 6.003084e-49 | -8.615850e-47 |
| Msa0596880 | Msa1255030 | 0.817470 | 3.242548e-52 | -8.615850e-47 |
| Msa0596880 | Msa1257860 | 0.808026 | 3.791385e-50 | -8.615850e-47 |
| Msa0596880 | Msa1266750 | 0.829215 | 5.831981e-55 | -8.615850e-47 |
| Msa0596880 | Msa1269730 | 0.820939 | 5.261546e-53 | -8.615850e-47 |
| Msa0596880 | Msa1270860 | 0.819512 | 1.116915e-52 | -8.615850e-47 |
| Msa0596880 | Msa1271220 | 0.803790 | 2.946171e-49 | -8.615850e-47 |
| Msa0596880 | Msa1279200 | 0.810600 | 1.063230e-50 | -8.615850e-47 |
| Msa0596880 | Msa1280520 | 0.800319 | 1.524256e-48 | -8.615850e-47 |
| Msa0596880 | Msa1286860 | 0.834835 | 2.381321e-56 | -8.615850e-47 |
| Msa0596880 | Msa1287100 | 0.811220 | 7.805111e-51 | -8.615850e-47 |
| Msa0596880 | Msa1288380 | 0.801363 | 9.328203e-49 | -8.615850e-47 |
| Msa0596880 | Msa1295210 | 0.838227 | 3.258932e-57 | -8.615850e-47 |
| Msa0596880 | Msa1295480 | 0.821421 | 4.073384e-53 | -8.615850e-47 |
| Msa0596880 | Msa1296810 | 0.805635 | 1.213528e-49 | -8.615850e-47 |
| Msa0596880 | Msa1297490 | 0.802265 | 6.089717e-49 | -8.615850e-47 |
| Msa0596880 | Msa1297550 | 0.801594 | 8.365960e-49 | -8.615850e-47 |
| Msa0596880 | Msa1298180 | 0.810460 | 1.139940e-50 | -8.615850e-47 |
| Msa0596880 | Msa1301610 | 0.800142 | 1.655767e-48 | -8.615850e-47 |
| Msa0596880 | Msa1303690 | 0.827595 | 1.434684e-54 | -8.615850e-47 |
| Msa0596880 | Msa1308010 | 0.803364 | 3.611639e-49 | -8.615850e-47 |
| Msa0596880 | Msa1312800 | 0.807072 | 6.041711e-50 | -8.615850e-47 |
| Msa0596880 | Msa1312840 | 0.812213 | 4.746135e-51 | -8.615850e-47 |
| Msa0596880 | Msa1325260 | 0.802231 | 6.188902e-49 | -8.615850e-47 |
| Msa0596880 | Msa1328680 | 0.819910 | 9.063209e-53 | -8.615850e-47 |
| Msa0596880 | Msa1330080 | 0.847235 | 1.314541e-59 | -8.615850e-47 |
| Msa0596880 | Msa1331530 | 0.807283 | 5.452736e-50 | -8.615850e-47 |
| Msa0596880 | Msa1335210 | 0.811158 | 8.052701e-51 | -8.615850e-47 |
| Msa0596880 | Msa1338600 | 0.816597 | 5.093944e-52 | -8.615850e-47 |
| Msa0596880 | Msa1338810 | 0.801017 | 1.098008e-48 | -8.615850e-47 |
| Msa0596880 | Msa1341710 | 0.817380 | 3.398563e-52 | -8.615850e-47 |
| Msa0596880 | Msa1342360 | 0.812328 | 4.480030e-51 | -8.615850e-47 |
| Msa0596880 | Msa1342460 | 0.821980 | 3.025333e-53 | -8.615850e-47 |
| Msa0596880 | Msa1348180 | 0.813906 | 2.018883e-51 | -8.615850e-47 |
| Msa0596880 | Msa1348230 | 0.802231 | 6.188656e-49 | -8.615850e-47 |
| Msa0596880 | Msa1350580 | 0.813946 | 1.978368e-51 | -8.615850e-47 |
| Msa0596880 | Msa1350590 | 0.801756 | 7.747907e-49 | -8.615850e-47 |
| Msa0596880 | Msa1363170 | 0.824698 | 7.010623e-54 | -8.615850e-47 |
| Msa0596880 | Msa1369390 | 0.816762 | 4.678561e-52 | -8.615850e-47 |
| Msa0596880 | Msa1373420 | 0.802322 | 5.928279e-49 | -8.615850e-47 |
| Msa0596880 | Msa1375570 | 0.842423 | 2.609867e-58 | -8.615850e-47 |
| Msa0596880 | Msa1375650 | 0.825311 | 5.024535e-54 | -8.615850e-47 |
| Msa0596880 | Msa1375980 | 0.831734 | 1.411356e-55 | -8.615850e-47 |
| Msa0596880 | Msa1377980 | 0.804831 | 1.788855e-49 | -8.615850e-47 |
| Msa0596880 | Msa1379270 | 0.820514 | 6.588251e-53 | -8.615850e-47 |
| Msa0596880 | Msa1398150 | 0.811341 | 7.349751e-51 | -8.615850e-47 |
| Msa0596880 | Msa1400830 | 0.810769 | 9.776699e-51 | -8.615850e-47 |
| Msa0596880 | Msa1401640 | 0.800063 | 1.717671e-48 | -8.615850e-47 |
| Msa0596880 | Msa1403820 | 0.848235 | 6.973644e-60 | -8.615850e-47 |
| Msa0596880 | Msa1408230 | 0.824143 | 9.471315e-54 | -8.615850e-47 |
| Msa0596880 | Msa1408280 | 0.805904 | 1.065858e-49 | -8.615850e-47 |
| Msa0596880 | Msa1415510 | 0.803785 | 2.953277e-49 | -8.615850e-47 |
| Msa0596880 | Msa1418210 | 0.833687 | 4.621183e-56 | -8.615850e-47 |
| Msa0596880 | Msa1418840 | 0.808440 | 3.093866e-50 | -8.615850e-47 |
| Msa0596880 | Msa1423560 | 0.808160 | 3.549227e-50 | -8.615850e-47 |
| Msa0596880 | Msa1429180 | 0.828920 | 6.873714e-55 | -8.615850e-47 |
| Msa0596880 | Msa1430630 | 0.822065 | 2.891560e-53 | -8.615850e-47 |
| Msa0596880 | Msa1435950 | 0.816522 | 5.295396e-52 | -8.615850e-47 |
| Msa0596880 | Msa1439000 | 0.806896 | 6.584831e-50 | -8.615850e-47 |
| Msa0596880 | Msa1452800 | 0.805177 | 1.513870e-49 | -8.615850e-47 |
| Msa0596880 | Msa1453540 | 0.816897 | 4.364188e-52 | -8.615850e-47 |
| Msa0596880 | Msa1460340 | 0.801333 | 9.461611e-49 | -8.615850e-47 |
| Msa0596880 | Msa1462700 | 0.833024 | 6.764117e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0596880 | MtrunA17_Chr4g0019301 | 96.991 | 432 | 13 | 0 | 3 | 434 | 1 | 432 | 0.0 | 869 |
| Msa0596880 | MtrunA17_Chr3g0089171 | 80.769 | 364 | 70 | 0 | 66 | 429 | 6 | 369 | 0.0 | 621 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0596880 | AT3G63510.1 | 73.315 | 371 | 97 | 2 | 66 | 434 | 49 | 419 | 0.0 | 583 |
| Msa0596880 | AT5G47970.1 | 72.452 | 363 | 99 | 1 | 64 | 425 | 5 | 367 | 0.0 | 568 |
| Msa0596880 | AT5G47970.2 | 72.452 | 363 | 99 | 1 | 64 | 425 | 5 | 367 | 0.0 | 568 |
| Msa0596880 | AT3G63510.2 | 72.269 | 357 | 97 | 2 | 80 | 434 | 30 | 386 | 0.0 | 553 |
| Msa0596880 | AT5G47970.3 | 77.154 | 267 | 61 | 0 | 64 | 330 | 5 | 271 | 5.36e-159 | 450 |
| Msa0596880 | AT5G67220.1 | 28.902 | 173 | 117 | 5 | 46 | 216 | 66 | 234 | 1.30e-12 | 69.7 |
Find 116 sgRNAs with CRISPR-Local
Find 379 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGATGAAATTTGAACTTAA+AGG | 0.153849 | 4_2:-28484238 | None:intergenic |
| GATTTAACGTTTACAATAAA+TGG | 0.162079 | 4_2:+28487234 | Msa0596880:CDS |
| ACCCATGATACTCTGTTAAA+AGG | 0.187883 | 4_2:+28484169 | Msa0596880:five_prime_UTR |
| CATTGACGCAATTCCTGATT+TGG | 0.263132 | 4_2:+28489057 | Msa0596880:CDS |
| GACTCGGAGTTGGGAAAATA+TGG | 0.271444 | 4_2:+28487958 | Msa0596880:CDS |
| AATATCTTCCTCCTTGGTTT+AGG | 0.288680 | 4_2:+28484386 | Msa0596880:CDS |
| TTTATTGTAAACGTTAAATC+TGG | 0.301875 | 4_2:-28487231 | None:intergenic |
| CATCCCATCGTGCTTCAAAT+TGG | 0.309270 | 4_2:+28485384 | Msa0596880:CDS |
| GCATTAGCCCAGCTGAAAAT+AGG | 0.338887 | 4_2:+28487024 | Msa0596880:CDS |
| ACTTGCTTCGGCGCCGGGTT+CGG | 0.342025 | 4_2:-28483932 | None:intergenic |
| TTCTGCTCAGGACAGATTCT+TGG | 0.342613 | 4_2:+28485344 | Msa0596880:intron |
| CCAAGAGGTGGTTCCGAAAC+AGG | 0.353808 | 4_2:-28489091 | None:intergenic |
| AACTGTGGAATATTACTGTT+AGG | 0.365705 | 4_2:+28489426 | Msa0596880:three_prime_UTR |
| GTTTGCTTGTTCAATGAGTT+TGG | 0.369008 | 4_2:-28483852 | None:intergenic |
| TGTTCATCAAAAGGATAATC+TGG | 0.369652 | 4_2:+28485038 | Msa0596880:CDS |
| TGAGCAGTGCCTTCCTTGAA+TGG | 0.371548 | 4_2:-28486998 | None:intergenic |
| CCTGTTTCGGAACCACCTCT+TGG | 0.377580 | 4_2:+28489091 | Msa0596880:CDS |
| GGTGTTGGATTCGCCTGTTT+CGG | 0.381273 | 4_2:+28489078 | Msa0596880:CDS |
| CATGTTGATACTGCAATTTA+TGG | 0.381426 | 4_2:+28487778 | Msa0596880:CDS |
| AGCACGATGGGATGTTGTTC+CGG | 0.381532 | 4_2:-28485375 | None:intergenic |
| CTACAGCCCTTGGCATGTAT+TGG | 0.388197 | 4_2:+28487753 | Msa0596880:intron |
| TACAGCCCTTGGCATGTATT+GGG | 0.399945 | 4_2:+28487754 | Msa0596880:intron |
| GTAGCTGGACATGGGTCCTT+TGG | 0.400962 | 4_2:+28485592 | Msa0596880:CDS |
| GGCGAATCCAACACCAAATC+AGG | 0.404262 | 4_2:-28489070 | None:intergenic |
| TTGAACTGCATAAATTTCTC+TGG | 0.408550 | 4_2:-28484309 | None:intergenic |
| CAAATCAGGAATTGCGTCAA+TGG | 0.409460 | 4_2:-28489056 | None:intergenic |
| TGGAAACTTGCTTCGGCGCC+GGG | 0.415299 | 4_2:-28483937 | None:intergenic |
| GTCTATGGGGACTCGGAGTT+GGG | 0.421772 | 4_2:+28487949 | Msa0596880:CDS |
| AGTCTATGGGGACTCGGAGT+TGG | 0.424449 | 4_2:+28487948 | Msa0596880:CDS |
| CCCATGATACTCTGTTAAAA+GGG | 0.430044 | 4_2:+28484170 | Msa0596880:five_prime_UTR |
| ACTGGACAGATAATCATTAC+AGG | 0.431189 | 4_2:+28484950 | Msa0596880:CDS |
| CGCTTCCACTGTCCATTCCC+AGG | 0.435989 | 4_2:-28488463 | None:intergenic |
| AGCATTTCATAATCCATTCA+AGG | 0.439301 | 4_2:+28486985 | Msa0596880:CDS |
| GTCCATTCCCAGGCGCTGAA+TGG | 0.442664 | 4_2:-28488453 | None:intergenic |
| CGCAATTCCTGATTTGGTGT+TGG | 0.443836 | 4_2:+28489063 | Msa0596880:CDS |
| ATGGAAACTTGCTTCGGCGC+CGG | 0.452590 | 4_2:-28483938 | None:intergenic |
| AGAAACAATTGTTCATCAAA+AGG | 0.455079 | 4_2:+28485029 | Msa0596880:CDS |
| CTGTGGTCTTACACGTCGTC+AGG | 0.456193 | 4_2:+28487810 | Msa0596880:CDS |
| GTCAATGCAGCACGAGACGC+TGG | 0.456446 | 4_2:+28487432 | Msa0596880:CDS |
| GCACGAGACGCTGGGGCTCA+TGG | 0.457714 | 4_2:+28487441 | Msa0596880:CDS |
| TGCCCAAGTCCTAGAGTAGC+TGG | 0.463422 | 4_2:+28485577 | Msa0596880:CDS |
| GGGGCTCATGGTGTTATGAT+TGG | 0.465783 | 4_2:+28487453 | Msa0596880:CDS |
| TTATCTGTCCAGTCCATCAT+TGG | 0.466600 | 4_2:-28484940 | None:intergenic |
| AAAATGGTAATGACGAAACT+TGG | 0.466733 | 4_2:-28489215 | None:intergenic |
| TAGTTGTAGTCGTAGATTAC+CGG | 0.468758 | 4_2:+28484267 | Msa0596880:CDS |
| TTCCATTCAGCGCCTGGGAA+TGG | 0.470082 | 4_2:+28488451 | Msa0596880:CDS |
| AATAGAGTTTACTTGAAGGA+TGG | 0.473187 | 4_2:-28483957 | None:intergenic |
| GTAAACAATATCTTCCTCCT+TGG | 0.474740 | 4_2:+28484380 | Msa0596880:CDS |
| AACTCATTGAACAAGCAAAC+AGG | 0.474968 | 4_2:+28483855 | Msa0596880:five_prime_UTR |
| ACCTCTTCTCTTGTTTCGTA+TGG | 0.475603 | 4_2:-28489157 | None:intergenic |
| TATGATAAACATGGGGTGCC+TGG | 0.483103 | 4_2:+28484358 | Msa0596880:CDS |
| GTCAGTGTCAAATGTCGAAT+TGG | 0.488293 | 4_2:+28485796 | Msa0596880:CDS |
| GTCTCATTTCAAAGCATGCT+TGG | 0.491634 | 4_2:+28484983 | Msa0596880:CDS |
| TGTCCAGCTACTCTAGGACT+TGG | 0.495599 | 4_2:-28485580 | None:intergenic |
| ACTGTTAGGAAAAGGACAAA+GGG | 0.496622 | 4_2:+28489440 | Msa0596880:three_prime_UTR |
| AAACTTGGTTTCTCAGTGCA+TGG | 0.498454 | 4_2:-28489200 | None:intergenic |
| CAGATTCTTGGCATATTCTC+CGG | 0.500066 | 4_2:+28485356 | Msa0596880:CDS |
| AATCTGGAAAGTCGCGCAAA+AGG | 0.500077 | 4_2:-28487215 | None:intergenic |
| TGAAGGATGGAAACTTGCTT+CGG | 0.507022 | 4_2:-28483944 | None:intergenic |
| GGAATATTACTGTTAGGAAA+AGG | 0.509693 | 4_2:+28489432 | Msa0596880:three_prime_UTR |
| ATCGGCGAACTGTGAATTGA+CGG | 0.519895 | 4_2:+28483885 | Msa0596880:five_prime_UTR |
| CAACAATCATATGATAAACA+TGG | 0.520567 | 4_2:+28484349 | Msa0596880:CDS |
| ATGGATTATGAAATGCTTAG+TGG | 0.521363 | 4_2:-28486979 | None:intergenic |
| CCCATCGTGCTTCAAATTGG+AGG | 0.528068 | 4_2:+28485387 | Msa0596880:CDS |
| TTTACTTCAACATACTTTAG+CGG | 0.528715 | 4_2:-28487056 | None:intergenic |
| AACAATCATATGATAAACAT+GGG | 0.532198 | 4_2:+28484350 | Msa0596880:CDS |
| AAGCAAACAGGTGATACAAT+CGG | 0.536959 | 4_2:+28483867 | Msa0596880:five_prime_UTR |
| GTCCAGCTACTCTAGGACTT+GGG | 0.537805 | 4_2:-28485579 | None:intergenic |
| ATATATAGTCTATGGGGACT+CGG | 0.539522 | 4_2:+28487942 | Msa0596880:CDS |
| TCAATGCAGCACGAGACGCT+GGG | 0.539672 | 4_2:+28487433 | Msa0596880:CDS |
| GGAGGAAGATATTGTTTACC+AGG | 0.540588 | 4_2:-28484376 | None:intergenic |
| ATTCGACATTTGACACTGAC+AGG | 0.541211 | 4_2:-28485793 | None:intergenic |
| TAGTCTTATGCTTGACCCGA+AGG | 0.541945 | 4_2:+28485618 | Msa0596880:CDS |
| TCTCTTGTTTCGTATGGCAG+TGG | 0.544613 | 4_2:-28489151 | None:intergenic |
| TAAAGCAAAACACAGTGGAT+TGG | 0.546727 | 4_2:+28489364 | Msa0596880:three_prime_UTR |
| TCTCCTTCTCAATCCGAACC+CGG | 0.546860 | 4_2:+28483919 | Msa0596880:five_prime_UTR |
| TTCACGATGTCTCGCACAGT+TGG | 0.548837 | 4_2:-28487988 | None:intergenic |
| CCTCCAATTTGAAGCACGAT+GGG | 0.549764 | 4_2:-28485387 | None:intergenic |
| TCAAGGAAGGCACTGCTCAA+TGG | 0.553455 | 4_2:+28487002 | Msa0596880:CDS |
| AACTTGGTTTCTCAGTGCAT+GGG | 0.557079 | 4_2:-28489199 | None:intergenic |
| ACATGTCCCAATACATGCCA+AGG | 0.557174 | 4_2:-28487760 | None:intergenic |
| TTTAACAGAGTATCATGGGT+TGG | 0.559416 | 4_2:-28484166 | None:intergenic |
| AGTCCTAGAGTAGCTGGACA+TGG | 0.562728 | 4_2:+28485583 | Msa0596880:CDS |
| TTTCATAATCCATTCAAGGA+AGG | 0.571399 | 4_2:+28486989 | Msa0596880:CDS |
| GTGTTGCTCCAATGATGGAC+TGG | 0.579380 | 4_2:+28484932 | Msa0596880:intron |
| TACTGTTAGGAAAAGGACAA+AGG | 0.583009 | 4_2:+28489439 | Msa0596880:three_prime_UTR |
| TCGGCGAACTGTGAATTGAC+GGG | 0.583973 | 4_2:+28483886 | Msa0596880:five_prime_UTR |
| ACAAGGAAAGTTTGTTGCGG+AGG | 0.585201 | 4_2:+28485738 | Msa0596880:intron |
| CCCTCCAATTTGAAGCACGA+TGG | 0.587352 | 4_2:-28485388 | None:intergenic |
| AGAGGTTGTTATATGCGCAT+AGG | 0.588258 | 4_2:+28489174 | Msa0596880:CDS |
| AGATCTGTGCGGCCAAGAGG+TGG | 0.598769 | 4_2:-28489103 | None:intergenic |
| GCGCCGGGTTCGGATTGAGA+AGG | 0.599951 | 4_2:-28483922 | None:intergenic |
| CCATCGTGCTTCAAATTGGA+GGG | 0.602325 | 4_2:+28485388 | Msa0596880:CDS |
| GCCATACGAAACAAGAGAAG+AGG | 0.602412 | 4_2:+28489156 | Msa0596880:CDS |
| TGGATTATGAAATGCTTAGT+GGG | 0.605032 | 4_2:-28486978 | None:intergenic |
| TTAACGTTTACAATAAATGG+AGG | 0.606220 | 4_2:+28487237 | Msa0596880:CDS |
| TAGGAAAAGGACAAAGGGAA+AGG | 0.606451 | 4_2:+28489445 | Msa0596880:three_prime_UTR |
| AAAAGATCTGTGCGGCCAAG+AGG | 0.612147 | 4_2:-28489106 | None:intergenic |
| GGGTGATAAAGAAGAAACTG+TGG | 0.616959 | 4_2:-28486958 | None:intergenic |
| GACCCATGTCCAGCTACTCT+AGG | 0.620658 | 4_2:-28485586 | None:intergenic |
| GTCCTAGAGTAGCTGGACAT+GGG | 0.634399 | 4_2:+28485584 | Msa0596880:CDS |
| TATACAAGGAAAGTTTGTTG+CGG | 0.637006 | 4_2:+28485735 | Msa0596880:intron |
| ACTTCAACATACTTTAGCGG+AGG | 0.641330 | 4_2:-28487053 | None:intergenic |
| CAATGCAGCACGAGACGCTG+GGG | 0.646864 | 4_2:+28487434 | Msa0596880:CDS |
| TGTCAAATGTCGAATTGGTG+TGG | 0.664761 | 4_2:+28485801 | Msa0596880:CDS |
| CAGCGCCTGGGAATGGACAG+TGG | 0.665445 | 4_2:+28488458 | Msa0596880:CDS |
| CATGTCCCAATACATGCCAA+GGG | 0.670330 | 4_2:-28487759 | None:intergenic |
| AGGTATTACTAGTGTTGATG+AGG | 0.671847 | 4_2:+28487257 | Msa0596880:CDS |
| ATTTATGGTGCACAAAGCTG+TGG | 0.678668 | 4_2:+28487793 | Msa0596880:CDS |
| AAGCATAAGACTAACACCAA+AGG | 0.681174 | 4_2:-28485608 | None:intergenic |
| GATAGTACTCACCTAAACCA+AGG | 0.689488 | 4_2:-28484397 | None:intergenic |
| ACAATCATATGATAAACATG+GGG | 0.693233 | 4_2:+28484351 | Msa0596880:CDS |
| GAAGCTAAAGCAAAACACAG+TGG | 0.702898 | 4_2:+28489359 | Msa0596880:three_prime_UTR |
| AACTGTGCGAGACATCGTGA+AGG | 0.727376 | 4_2:+28487990 | Msa0596880:CDS |
| AGTACTCACCTAAACCAAGG+AGG | 0.754894 | 4_2:-28484394 | None:intergenic |
| TGGACAGTGGAAGCGCAATG+CGG | 0.758211 | 4_2:+28488471 | Msa0596880:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTAACTTAAAGATTTA+AGG | - | chr4_2:28485504-28485523 | None:intergenic | 10.0% |
| !!! | TGCATAAATTTTTATAAAAT+GGG | - | chr4_2:28485935-28485954 | None:intergenic | 10.0% |
| !! | TCTTCTATAATAATAATATT+TGG | + | chr4_2:28486877-28486896 | Msa0596880:intron | 10.0% |
| !! | ATAAATTATTAAACAACAAA+TGG | - | chr4_2:28487896-28487915 | None:intergenic | 10.0% |
| !! | AAAATATTGAATATTTCATA+GGG | - | chr4_2:28488132-28488151 | None:intergenic | 10.0% |
| !! | AAAAATATTGAATATTTCAT+AGG | - | chr4_2:28488133-28488152 | None:intergenic | 10.0% |
| !!! | ATTTTAATATATCAACTAAT+AGG | - | chr4_2:28488365-28488384 | None:intergenic | 10.0% |
| !! | GAAAAAATTGAATTGAAAAA+GGG | - | chr4_2:28484047-28484066 | None:intergenic | 15.0% |
| !! | AGAAAAAATTGAATTGAAAA+AGG | - | chr4_2:28484048-28484067 | None:intergenic | 15.0% |
| !!! | TTAACGATTTTTTTAATTGT+AGG | + | chr4_2:28484132-28484151 | Msa0596880:intron | 15.0% |
| !!! | TAACTTTTTTTTTTTTAACG+AGG | + | chr4_2:28484424-28484443 | Msa0596880:intron | 15.0% |
| !!! | ATAAATTTTTATAAAATGGG+AGG | - | chr4_2:28485932-28485951 | None:intergenic | 15.0% |
| !!! | CTGCATAAATTTTTATAAAA+TGG | - | chr4_2:28485936-28485955 | None:intergenic | 15.0% |
| !! | CAAACATATATATCATTATA+TGG | - | chr4_2:28485977-28485996 | None:intergenic | 15.0% |
| !! | ATAATATATTCAATGAGTAA+TGG | - | chr4_2:28486531-28486550 | None:intergenic | 15.0% |
| !!! | ATCTAAGAGAAAAATAATTT+TGG | + | chr4_2:28486584-28486603 | Msa0596880:intron | 15.0% |
| !! | ATATTTGCTTCATATAAATT+AGG | + | chr4_2:28486644-28486663 | Msa0596880:intron | 15.0% |
| !! | TAATAATAATATTTGGATCA+TGG | + | chr4_2:28486884-28486903 | Msa0596880:intron | 15.0% |
| !!! | AATTTATTTTCGTATACTTT+AGG | + | chr4_2:28487909-28487928 | Msa0596880:intron | 15.0% |
| !! | TTGAAAAATATATAGTCTAT+GGG | + | chr4_2:28487935-28487954 | Msa0596880:CDS | 15.0% |
| !! | AAATATTGAATATTTCATAG+GGG | - | chr4_2:28488131-28488150 | None:intergenic | 15.0% |
| !!! | TTTATTTTTAAATATTGGAG+AGG | + | chr4_2:28488291-28488310 | Msa0596880:intron | 15.0% |
| !!! | TACTGTAAAAGTTAATATTT+TGG | - | chr4_2:28488588-28488607 | None:intergenic | 15.0% |
| !! | AAAAATCGTTAATTAAACTG+TGG | - | chr4_2:28484124-28484143 | None:intergenic | 20.0% |
| !! | AACAATCATATGATAAACAT+GGG | + | chr4_2:28484350-28484369 | Msa0596880:CDS | 20.0% |
| !!! | TACAGTTACTCTTTAAAATA+CGG | + | chr4_2:28484584-28484603 | Msa0596880:intron | 20.0% |
| !! | TTAAAATACGGTTACAATAT+AGG | + | chr4_2:28484596-28484615 | Msa0596880:intron | 20.0% |
| !! | ATTTAATCTCTAACAATGTA+GGG | - | chr4_2:28484813-28484832 | None:intergenic | 20.0% |
| !! | AATTTAATCTCTAACAATGT+AGG | - | chr4_2:28484814-28484833 | None:intergenic | 20.0% |
| !! | TACATTGTTAGAGATTAAAT+TGG | + | chr4_2:28484813-28484832 | Msa0596880:intron | 20.0% |
| !! | ATCAGTATATTTATAGCATA+AGG | - | chr4_2:28484867-28484886 | None:intergenic | 20.0% |
| !! | AAAGAAAACTAATGTATACA+AGG | + | chr4_2:28485721-28485740 | Msa0596880:intron | 20.0% |
| !! | AAAAAGGCTATCAATTTATT+AGG | + | chr4_2:28486068-28486087 | Msa0596880:intron | 20.0% |
| !! | ATTATTATCACAAAATCCAT+TGG | + | chr4_2:28486102-28486121 | Msa0596880:intron | 20.0% |
| !!! | AGATTTTGAGATTAATAAGT+TGG | + | chr4_2:28486309-28486328 | Msa0596880:intron | 20.0% |
| !!! | AAGAGAAAAATAATTTTGGT+AGG | + | chr4_2:28486588-28486607 | Msa0596880:intron | 20.0% |
| !! | AAGTATGTTGAAGTAAAATT+TGG | + | chr4_2:28487062-28487081 | Msa0596880:intron | 20.0% |
| !! | TTTATTGTAAACGTTAAATC+TGG | - | chr4_2:28487234-28487253 | None:intergenic | 20.0% |
| !! | GATTTAACGTTTACAATAAA+TGG | + | chr4_2:28487234-28487253 | Msa0596880:CDS | 20.0% |
| !! | CAAATATTTCAACAAATATC+AGG | - | chr4_2:28487320-28487339 | None:intergenic | 20.0% |
| !!! | CTGATATTTGTTGAAATATT+TGG | + | chr4_2:28487318-28487337 | Msa0596880:intron | 20.0% |
| !!! | TTTTTGTTTGAAAAATCGTA+TGG | - | chr4_2:28487529-28487548 | None:intergenic | 20.0% |
| !!! | CAAAAAAGTTGCTTTATTTT+AGG | + | chr4_2:28487543-28487562 | Msa0596880:intron | 20.0% |
| !! | CTTGAAAAATATATAGTCTA+TGG | + | chr4_2:28487934-28487953 | Msa0596880:CDS | 20.0% |
| !! | TGAAAAATATATAGTCTATG+GGG | + | chr4_2:28487936-28487955 | Msa0596880:CDS | 20.0% |
| !! | GAAATTGCAAAATCAATTTA+AGG | - | chr4_2:28488023-28488042 | None:intergenic | 20.0% |
| !! | AAAATGGTCAAAAAATTGAT+TGG | + | chr4_2:28488244-28488263 | Msa0596880:intron | 20.0% |
| !! | AAATGGTCAAAAAATTGATT+GGG | + | chr4_2:28488245-28488264 | Msa0596880:intron | 20.0% |
| !! | AAATAGTTCTTTCACTTTAT+AGG | - | chr4_2:28488750-28488769 | None:intergenic | 20.0% |
| !!! | TATTTTTACATGATAGTGAA+AGG | + | chr4_2:28488765-28488784 | Msa0596880:intron | 20.0% |
| !!! | ATTTTTACATGATAGTGAAA+GGG | + | chr4_2:28488766-28488785 | Msa0596880:intron | 20.0% |
| !!! | TCAGTATTTTAACATAGTTA+TGG | + | chr4_2:28488822-28488841 | Msa0596880:intron | 20.0% |
| !!! | CAGTATTTTAACATAGTTAT+GGG | + | chr4_2:28488823-28488842 | Msa0596880:intron | 20.0% |
| !! | TTAGCATTTGAATCAATTTA+CGG | - | chr4_2:28488990-28489009 | None:intergenic | 20.0% |
| ! | CTGATGAAATTTGAACTTAA+AGG | - | chr4_2:28484241-28484260 | None:intergenic | 25.0% |
| ! | CAACAATCATATGATAAACA+TGG | + | chr4_2:28484349-28484368 | Msa0596880:CDS | 25.0% |
| ! | ACAATCATATGATAAACATG+GGG | + | chr4_2:28484351-28484370 | Msa0596880:CDS | 25.0% |
| !!! | GTTGTCAATTTTGATATTCA+AGG | + | chr4_2:28484743-28484762 | Msa0596880:intron | 25.0% |
| !!! | ATTTGGTCTTCTTTTTATGT+TGG | + | chr4_2:28484899-28484918 | Msa0596880:intron | 25.0% |
| ! | AGAAACAATTGTTCATCAAA+AGG | + | chr4_2:28485029-28485048 | Msa0596880:CDS | 25.0% |
| ! | TGTTCAAAAAAAGTCCTATA+CGG | - | chr4_2:28485175-28485194 | None:intergenic | 25.0% |
| ! | ATTGTTTATATCATAGCAGT+GGG | + | chr4_2:28485212-28485231 | Msa0596880:intron | 25.0% |
| ! | TGTTATTCAATCATCAAATG+TGG | + | chr4_2:28485278-28485297 | Msa0596880:intron | 25.0% |
| ! | GTTATTCAATCATCAAATGT+GGG | + | chr4_2:28485279-28485298 | Msa0596880:intron | 25.0% |
| ! | ACACAAAATGGAAGAATAAA+TGG | - | chr4_2:28485323-28485342 | None:intergenic | 25.0% |
| ! | TAATAAACATATATCAGCTG+TGG | + | chr4_2:28485553-28485572 | Msa0596880:intron | 25.0% |
| ! | TTCTTATGATGAACTTTGTA+AGG | + | chr4_2:28485834-28485853 | Msa0596880:intron | 25.0% |
| !! | CTTTTAGATTTCACTCAAAA+AGG | + | chr4_2:28486052-28486071 | Msa0596880:intron | 25.0% |
| ! | TTAAAGAAAACAGAAACCAA+TGG | - | chr4_2:28486121-28486140 | None:intergenic | 25.0% |
| !! | GTTTCTCTTATAGTTTTTCT+AGG | - | chr4_2:28486280-28486299 | None:intergenic | 25.0% |
| !! | TTTGAGATTAATAAGTTGGA+CGG | + | chr4_2:28486313-28486332 | Msa0596880:intron | 25.0% |
| ! | TGGTTTATGATTGAACATTA+TGG | + | chr4_2:28486341-28486360 | Msa0596880:intron | 25.0% |
| ! | GGTTTATGATTGAACATTAT+GGG | + | chr4_2:28486342-28486361 | Msa0596880:intron | 25.0% |
| ! | AGGATCAATATAGTATCATT+GGG | + | chr4_2:28486479-28486498 | Msa0596880:intron | 25.0% |
| ! | ACTATTGTACAAATCGAAAT+TGG | + | chr4_2:28486707-28486726 | Msa0596880:intron | 25.0% |
| !! | TTTTCTAACCAATGTTACAT+GGG | + | chr4_2:28486748-28486767 | Msa0596880:intron | 25.0% |
| ! | TTACATGGGATTTAGTATTT+GGG | + | chr4_2:28486762-28486781 | Msa0596880:intron | 25.0% |
| ! | TTTACTTCAACATACTTTAG+CGG | - | chr4_2:28487059-28487078 | None:intergenic | 25.0% |
| !! | TGCAGATATGAATACTTTTA+TGG | + | chr4_2:28487192-28487211 | Msa0596880:intron | 25.0% |
| ! | TTAACGTTTACAATAAATGG+AGG | + | chr4_2:28487237-28487256 | Msa0596880:CDS | 25.0% |
| ! | TAGCATTTCTCTTCAATAAA+AGG | + | chr4_2:28487581-28487600 | Msa0596880:intron | 25.0% |
| ! | AGCATTTCTCTTCAATAAAA+GGG | + | chr4_2:28487582-28487601 | Msa0596880:intron | 25.0% |
| ! | TTGCACAAACAATATTAAGA+GGG | - | chr4_2:28487692-28487711 | None:intergenic | 25.0% |
| !!! | AAAGCATCCATTTTTGTAAA+AGG | - | chr4_2:28488167-28488186 | None:intergenic | 25.0% |
| !!! | ACTAAAAGTACCTGTTTTTA+TGG | + | chr4_2:28488203-28488222 | Msa0596880:intron | 25.0% |
| !! | TTTTTATGGAGTAAAAAGGA+AGG | + | chr4_2:28488217-28488236 | Msa0596880:intron | 25.0% |
| ! | TAAAAAGGAAGGAGTAAAAA+TGG | + | chr4_2:28488228-28488247 | Msa0596880:intron | 25.0% |
| ! | GAATGGAAAAAATTGAGTAA+AGG | - | chr4_2:28488439-28488458 | None:intergenic | 25.0% |
| !!! | GTAAAAGTTAATATTTTGGC+TGG | - | chr4_2:28488584-28488603 | None:intergenic | 25.0% |
| ! | TTAATTCATCTATGAGTGTA+TGG | + | chr4_2:28488860-28488879 | Msa0596880:intron | 25.0% |
| ! | ACTTCATTTCACACAAAAAA+TGG | - | chr4_2:28489234-28489253 | None:intergenic | 25.0% |
| AATAGAGTTTACTTGAAGGA+TGG | - | chr4_2:28483960-28483979 | None:intergenic | 30.0% | |
| GTAGAATAGAGTTTACTTGA+AGG | - | chr4_2:28483964-28483983 | None:intergenic | 30.0% | |
| ! | GGATGAAAATGAAGTTTTCA+GGG | + | chr4_2:28484191-28484210 | Msa0596880:exon | 30.0% |
| TTGAACTGCATAAATTTCTC+TGG | - | chr4_2:28484312-28484331 | None:intergenic | 30.0% | |
| ! | TTTTTAACGAGGAGTAATTG+TGG | + | chr4_2:28484435-28484454 | Msa0596880:intron | 30.0% |
| ! | ATGTTTTCCACAGACAATAT+AGG | + | chr4_2:28484671-28484690 | Msa0596880:intron | 30.0% |
| AAGGAGACGATAATAATAAG+AGG | - | chr4_2:28484848-28484867 | None:intergenic | 30.0% | |
| CTGATTTCGCTAACAAAATT+TGG | + | chr4_2:28484882-28484901 | Msa0596880:intron | 30.0% | |
| TGTTCATCAAAAGGATAATC+TGG | + | chr4_2:28485038-28485057 | Msa0596880:CDS | 30.0% | |
| !! | AGCTTGTTAACGAAAATGAA+CGG | + | chr4_2:28485081-28485100 | Msa0596880:intron | 30.0% |
| GATTGTTTATATCATAGCAG+TGG | + | chr4_2:28485211-28485230 | Msa0596880:intron | 30.0% | |
| TCAATATGACAACATGCAAT+TGG | + | chr4_2:28485660-28485679 | Msa0596880:intron | 30.0% | |
| ! | TCTTTATCAATGCAAGTTGA+CGG | - | chr4_2:28485706-28485725 | None:intergenic | 30.0% |
| !! | TATACAAGGAAAGTTTGTTG+CGG | + | chr4_2:28485735-28485754 | Msa0596880:intron | 30.0% |
| AGACAGAGAATGTATAAAGA+AGG | - | chr4_2:28485861-28485880 | None:intergenic | 30.0% | |
| ACAACTAAGCTGTACTTAAA+TGG | + | chr4_2:28486022-28486041 | Msa0596880:intron | 30.0% | |
| TCAATTTATTAGGTACATGC+TGG | + | chr4_2:28486078-28486097 | Msa0596880:intron | 30.0% | |
| CAATTTATTAGGTACATGCT+GGG | + | chr4_2:28486079-28486098 | Msa0596880:intron | 30.0% | |
| TCTTTAACACCTAATTAGTG+TGG | + | chr4_2:28486134-28486153 | Msa0596880:intron | 30.0% | |
| CTTTAACACCTAATTAGTGT+GGG | + | chr4_2:28486135-28486154 | Msa0596880:intron | 30.0% | |
| ! | TAATAAGTTGGACGGAAATA+TGG | + | chr4_2:28486321-28486340 | Msa0596880:intron | 30.0% |
| TCTAATTGTAACATGCTGAT+AGG | + | chr4_2:28486430-28486449 | Msa0596880:intron | 30.0% | |
| CAGGATCAATATAGTATCAT+TGG | + | chr4_2:28486478-28486497 | Msa0596880:intron | 30.0% | |
| GGATCAATATAGTATCATTG+GGG | + | chr4_2:28486480-28486499 | Msa0596880:intron | 30.0% | |
| GATCAATATAGTATCATTGG+GGG | + | chr4_2:28486481-28486500 | Msa0596880:intron | 30.0% | |
| ATCAATATAGTATCATTGGG+GGG | + | chr4_2:28486482-28486501 | Msa0596880:intron | 30.0% | |
| TATGAAGCAAATATGACTCT+TGG | - | chr4_2:28486638-28486657 | None:intergenic | 30.0% | |
| CGATTTGTACAATAGTAGAT+AGG | - | chr4_2:28486703-28486722 | None:intergenic | 30.0% | |
| ! | CTTTTCTAACCAATGTTACA+TGG | + | chr4_2:28486747-28486766 | Msa0596880:intron | 30.0% |
| TACTAAATCCCATGTAACAT+TGG | - | chr4_2:28486759-28486778 | None:intergenic | 30.0% | |
| GTTACATGGGATTTAGTATT+TGG | + | chr4_2:28486761-28486780 | Msa0596880:intron | 30.0% | |
| TACGATCTAAATCACATCAT+TGG | - | chr4_2:28486847-28486866 | None:intergenic | 30.0% | |
| AATGATGTGATTTAGATCGT+AGG | + | chr4_2:28486846-28486865 | Msa0596880:intron | 30.0% | |
| AATATTTGGATCATGGTTTC+TGG | + | chr4_2:28486891-28486910 | Msa0596880:intron | 30.0% | |
| ATATTTGGATCATGGTTTCT+GGG | + | chr4_2:28486892-28486911 | Msa0596880:intron | 30.0% | |
| TGGATTATGAAATGCTTAGT+GGG | - | chr4_2:28486981-28487000 | None:intergenic | 30.0% | |
| ! | ATGGATTATGAAATGCTTAG+TGG | - | chr4_2:28486982-28487001 | None:intergenic | 30.0% |
| AGCATTTCATAATCCATTCA+AGG | + | chr4_2:28486985-28487004 | Msa0596880:CDS | 30.0% | |
| TTTCATAATCCATTCAAGGA+AGG | + | chr4_2:28486989-28487008 | Msa0596880:CDS | 30.0% | |
| !! | CTGCACTAAATTTGTTATCA+CGG | + | chr4_2:28487348-28487367 | Msa0596880:intron | 30.0% |
| !! | TGCACTAAATTTGTTATCAC+GGG | + | chr4_2:28487349-28487368 | Msa0596880:intron | 30.0% |
| AAAAATCGTATGGTCAAAAG+GGG | - | chr4_2:28487519-28487538 | None:intergenic | 30.0% | |
| GAAAAATCGTATGGTCAAAA+GGG | - | chr4_2:28487520-28487539 | None:intergenic | 30.0% | |
| TGAAAAATCGTATGGTCAAA+AGG | - | chr4_2:28487521-28487540 | None:intergenic | 30.0% | |
| !!! | TTGCTTTATTTTAGGAACCA+GGG | + | chr4_2:28487551-28487570 | Msa0596880:intron | 30.0% |
| AAAATCATCACCAAAGCTTA+AGG | + | chr4_2:28487610-28487629 | Msa0596880:intron | 30.0% | |
| !! | ACCAAAGCTTAAGGTTTTAA+GGG | + | chr4_2:28487619-28487638 | Msa0596880:intron | 30.0% |
| CTATAATAACAGTGCTTTGT+TGG | + | chr4_2:28487661-28487680 | Msa0596880:intron | 30.0% | |
| TGCACAAACAATATTAAGAG+GGG | - | chr4_2:28487691-28487710 | None:intergenic | 30.0% | |
| CTTGCACAAACAATATTAAG+AGG | - | chr4_2:28487693-28487712 | None:intergenic | 30.0% | |
| GCTGTAGAGATTATCAAAAA+TGG | - | chr4_2:28487740-28487759 | None:intergenic | 30.0% | |
| CATGTTGATACTGCAATTTA+TGG | + | chr4_2:28487778-28487797 | Msa0596880:CDS | 30.0% | |
| AGAAATTTCCAGAGAACAAA+AGG | - | chr4_2:28488051-28488070 | None:intergenic | 30.0% | |
| ! | GTCTCTACCTTTTACAAAAA+TGG | + | chr4_2:28488157-28488176 | Msa0596880:intron | 30.0% |
| ! | CCTTTTTACTCCATAAAAAC+AGG | - | chr4_2:28488216-28488235 | None:intergenic | 30.0% |
| !!! | CCTGTTTTTATGGAGTAAAA+AGG | + | chr4_2:28488213-28488232 | Msa0596880:intron | 30.0% |
| TATAACATGCTTCATGCAAA+TGG | - | chr4_2:28488340-28488359 | None:intergenic | 30.0% | |
| ATATAATAGCAGCTAATTGG+AGG | - | chr4_2:28488393-28488412 | None:intergenic | 30.0% | |
| GTCATATAATAGCAGCTAAT+TGG | - | chr4_2:28488396-28488415 | None:intergenic | 30.0% | |
| TGGCTGGAGTAAAAAAAAAA+TGG | - | chr4_2:28488568-28488587 | None:intergenic | 30.0% | |
| ! | TTTTCTGCCATTCCTATTTA+TGG | + | chr4_2:28488638-28488657 | Msa0596880:intron | 30.0% |
| TTACCATCCATAAATAGGAA+TGG | - | chr4_2:28488648-28488667 | None:intergenic | 30.0% | |
| ATTCCTATTTATGGATGGTA+AGG | + | chr4_2:28488647-28488666 | Msa0596880:intron | 30.0% | |
| ATTTCTCTAGTTATCCCTAA+AGG | + | chr4_2:28488722-28488741 | Msa0596880:intron | 30.0% | |
| TCACTTTATAGGATCCTTTA+GGG | - | chr4_2:28488739-28488758 | None:intergenic | 30.0% | |
| TTCACTTTATAGGATCCTTT+AGG | - | chr4_2:28488740-28488759 | None:intergenic | 30.0% | |
| TATTAGCAAAAAGATCTGTG+CGG | - | chr4_2:28489117-28489136 | None:intergenic | 30.0% | |
| ! | AAAATGGTAATGACGAAACT+TGG | - | chr4_2:28489218-28489237 | None:intergenic | 30.0% |
| AACTGTGGAATATTACTGTT+AGG | + | chr4_2:28489426-28489445 | Msa0596880:three_prime_UTR | 30.0% | |
| GGAATATTACTGTTAGGAAA+AGG | + | chr4_2:28489432-28489451 | Msa0596880:three_prime_UTR | 30.0% | |
| AACTCATTGAACAAGCAAAC+AGG | + | chr4_2:28483855-28483874 | Msa0596880:five_prime_UTR | 35.0% | |
| AAGCAAACAGGTGATACAAT+CGG | + | chr4_2:28483867-28483886 | Msa0596880:five_prime_UTR | 35.0% | |
| !! | GTTTTAGATGGAAGTGAATG+AGG | - | chr4_2:28484015-28484034 | None:intergenic | 35.0% |
| !!! | GGGAATAAGTGAGTTTTAGA+TGG | - | chr4_2:28484027-28484046 | None:intergenic | 35.0% |
| ! | TTTAACAGAGTATCATGGGT+TGG | - | chr4_2:28484169-28484188 | None:intergenic | 35.0% |
| ACCCATGATACTCTGTTAAA+AGG | + | chr4_2:28484169-28484188 | Msa0596880:five_prime_UTR | 35.0% | |
| !! | CCCTTTTAACAGAGTATCAT+GGG | - | chr4_2:28484173-28484192 | None:intergenic | 35.0% |
| CCCATGATACTCTGTTAAAA+GGG | + | chr4_2:28484170-28484189 | Msa0596880:five_prime_UTR | 35.0% | |
| !! | TCCCTTTTAACAGAGTATCA+TGG | - | chr4_2:28484174-28484193 | None:intergenic | 35.0% |
| ! | GGGATGAAAATGAAGTTTTC+AGG | + | chr4_2:28484190-28484209 | Msa0596880:exon | 35.0% |
| TAGTTGTAGTCGTAGATTAC+CGG | + | chr4_2:28484267-28484286 | Msa0596880:CDS | 35.0% | |
| GTAAACAATATCTTCCTCCT+TGG | + | chr4_2:28484380-28484399 | Msa0596880:CDS | 35.0% | |
| AATATCTTCCTCCTTGGTTT+AGG | + | chr4_2:28484386-28484405 | Msa0596880:CDS | 35.0% | |
| GGTTACAATATAGGCTTATG+TGG | + | chr4_2:28484605-28484624 | Msa0596880:intron | 35.0% | |
| TCATAAGCCTATATTGTCTG+TGG | - | chr4_2:28484681-28484700 | None:intergenic | 35.0% | |
| ACAGACAATATAGGCTTATG+AGG | + | chr4_2:28484680-28484699 | Msa0596880:intron | 35.0% | |
| GGCAATAAGAATGAGCAATT+TGG | + | chr4_2:28484701-28484720 | Msa0596880:intron | 35.0% | |
| !! | TTTTAGTGTTGCTCCAATGA+TGG | + | chr4_2:28484927-28484946 | Msa0596880:intron | 35.0% |
| ACTGGACAGATAATCATTAC+AGG | + | chr4_2:28484950-28484969 | Msa0596880:CDS | 35.0% | |
| ! | GCTTGTTAACGAAAATGAAC+GGG | + | chr4_2:28485082-28485101 | Msa0596880:intron | 35.0% |
| CTTGTTAACGAAAATGAACG+GGG | + | chr4_2:28485083-28485102 | Msa0596880:intron | 35.0% | |
| GTTGTAGAGTATATCCGTAT+AGG | + | chr4_2:28485158-28485177 | Msa0596880:intron | 35.0% | |
| TGAACTATAGCAGAACTTGA+TGG | + | chr4_2:28485253-28485272 | Msa0596880:intron | 35.0% | |
| AAGCATAAGACTAACACCAA+AGG | - | chr4_2:28485611-28485630 | None:intergenic | 35.0% | |
| ! | AGCGATGATTTTCTAACCTT+CGG | - | chr4_2:28485637-28485656 | None:intergenic | 35.0% |
| CTCTGTCTATCCTTATTGAA+AGG | + | chr4_2:28485873-28485892 | Msa0596880:intron | 35.0% | |
| AACTTGACAGCCTTTCAATA+AGG | - | chr4_2:28485886-28485905 | None:intergenic | 35.0% | |
| TATTGAAAGGCTGTCAAGTT+TGG | + | chr4_2:28485886-28485905 | Msa0596880:intron | 35.0% | |
| ACTAAGCTGTACTTAAATGG+TGG | + | chr4_2:28486025-28486044 | Msa0596880:intron | 35.0% | |
| ! | CATCTTTTCCCACACTAATT+AGG | - | chr4_2:28486146-28486165 | None:intergenic | 35.0% |
| CTAATTAGTGTGGGAAAAGA+TGG | + | chr4_2:28486144-28486163 | Msa0596880:intron | 35.0% | |
| TGGGATAATTTGATCCATGT+AGG | + | chr4_2:28486361-28486380 | Msa0596880:intron | 35.0% | |
| CTGATAGGAGTTTGTAATCT+TGG | + | chr4_2:28486445-28486464 | Msa0596880:intron | 35.0% | |
| TAATCTTGGCTTAGGAAATC+AGG | + | chr4_2:28486459-28486478 | Msa0596880:intron | 35.0% | |
| CAATAGTAGATAGGAGATAG+TGG | - | chr4_2:28486694-28486713 | None:intergenic | 35.0% | |
| TTGGAAATGTATTAAGCTGC+AGG | - | chr4_2:28486828-28486847 | None:intergenic | 35.0% | |
| !!! | TGAATTTTCTGCTGTTTTCC+AGG | + | chr4_2:28486924-28486943 | Msa0596880:intron | 35.0% |
| ! | GAATACTCCTATTTTCAGCT+GGG | - | chr4_2:28487034-28487053 | None:intergenic | 35.0% |
| CTTGTATGTCTACATGTACA+TGG | - | chr4_2:28487127-28487146 | None:intergenic | 35.0% | |
| !! | AGGTATTACTAGTGTTGATG+AGG | + | chr4_2:28487257-28487276 | Msa0596880:CDS | 35.0% |
| CGTGATAACAAATTTAGTGC+AGG | - | chr4_2:28487350-28487369 | None:intergenic | 35.0% | |
| !! | GCACTAAATTTGTTATCACG+GGG | + | chr4_2:28487350-28487369 | Msa0596880:intron | 35.0% |
| AAAATCGTATGGTCAAAAGG+GGG | - | chr4_2:28487518-28487537 | None:intergenic | 35.0% | |
| !!! | GTTGCTTTATTTTAGGAACC+AGG | + | chr4_2:28487550-28487569 | Msa0596880:intron | 35.0% |
| AGAAATGCTAAGTAAAACCC+TGG | - | chr4_2:28487571-28487590 | None:intergenic | 35.0% | |
| ! | CACCAAAGCTTAAGGTTTTA+AGG | + | chr4_2:28487618-28487637 | Msa0596880:intron | 35.0% |
| TCCCTTAAAACCTTAAGCTT+TGG | - | chr4_2:28487623-28487642 | None:intergenic | 35.0% | |
| !!! | AGCTTAAGGTTTTAAGGGAA+TGG | + | chr4_2:28487624-28487643 | Msa0596880:intron | 35.0% |
| ATATATAGTCTATGGGGACT+CGG | + | chr4_2:28487942-28487961 | Msa0596880:CDS | 35.0% | |
| ! | TTCTTACTCCTTTTGTTCTC+TGG | + | chr4_2:28488040-28488059 | Msa0596880:intron | 35.0% |
| AGAATAGCTGGTATTCGATA+AGG | + | chr4_2:28488089-28488108 | Msa0596880:intron | 35.0% | |
| ! | ATGCTTTTAGTCCCTATAGA+CGG | + | chr4_2:28488180-28488199 | Msa0596880:intron | 35.0% |
| ! | GTACTTTTAGTCCGTCTATA+GGG | - | chr4_2:28488194-28488213 | None:intergenic | 35.0% |
| AATGTTGCAGTAGCTAGATA+AGG | + | chr4_2:28488910-28488929 | Msa0596880:intron | 35.0% | |
| TAAAGCAAAACACAGTGGAT+TGG | + | chr4_2:28489364-28489383 | Msa0596880:three_prime_UTR | 35.0% | |
| !!! | TTAGCAGTTGTTTTGAACTG+TGG | + | chr4_2:28489411-28489430 | Msa0596880:three_prime_UTR | 35.0% |
| TACTGTTAGGAAAAGGACAA+AGG | + | chr4_2:28489439-28489458 | Msa0596880:three_prime_UTR | 35.0% | |
| ACTGTTAGGAAAAGGACAAA+GGG | + | chr4_2:28489440-28489459 | Msa0596880:three_prime_UTR | 35.0% | |
| ! | TGAAGGATGGAAACTTGCTT+CGG | - | chr4_2:28483947-28483966 | None:intergenic | 40.0% |
| CTTCTTCGAGAAAAACTCAC+CGG | - | chr4_2:28484289-28484308 | None:intergenic | 40.0% | |
| GGAGGAAGATATTGTTTACC+AGG | - | chr4_2:28484379-28484398 | None:intergenic | 40.0% | |
| GATAGTACTCACCTAAACCA+AGG | - | chr4_2:28484400-28484419 | None:intergenic | 40.0% | |
| TGGTCGTTAAATGTGTGAGA+CGG | + | chr4_2:28484455-28484474 | Msa0596880:intron | 40.0% | |
| ATATAGGCTTATGTGGCAAC+TGG | + | chr4_2:28484612-28484631 | Msa0596880:intron | 40.0% | |
| TTATGTGGCAACTGGCAATA+TGG | + | chr4_2:28484620-28484639 | Msa0596880:intron | 40.0% | |
| ! | AATGTAGGGCACTCTCATTT+AGG | - | chr4_2:28484799-28484818 | None:intergenic | 40.0% |
| TTATCTGTCCAGTCCATCAT+TGG | - | chr4_2:28484943-28484962 | None:intergenic | 40.0% | |
| GTCTCATTTCAAAGCATGCT+TGG | + | chr4_2:28484983-28485002 | Msa0596880:CDS | 40.0% | |
| CCTGAGCAGAATACACAAAA+TGG | - | chr4_2:28485335-28485354 | None:intergenic | 40.0% | |
| ! | CCATTTTGTGTATTCTGCTC+AGG | + | chr4_2:28485332-28485351 | Msa0596880:intron | 40.0% |
| CAGATTCTTGGCATATTCTC+CGG | + | chr4_2:28485356-28485375 | Msa0596880:CDS | 40.0% | |
| ! | GCGATGATTTTCTAACCTTC+GGG | - | chr4_2:28485636-28485655 | None:intergenic | 40.0% |
| ATTCGACATTTGACACTGAC+AGG | - | chr4_2:28485796-28485815 | None:intergenic | 40.0% | |
| GTCAGTGTCAAATGTCGAAT+TGG | + | chr4_2:28485796-28485815 | Msa0596880:CDS | 40.0% | |
| TGTCAAATGTCGAATTGGTG+TGG | + | chr4_2:28485801-28485820 | Msa0596880:CDS | 40.0% | |
| ATTAGTGTGGGAAAAGATGG+TGG | + | chr4_2:28486147-28486166 | Msa0596880:intron | 40.0% | |
| !! | TGGGAAAAGATGGTGGAAAA+GGG | + | chr4_2:28486154-28486173 | Msa0596880:intron | 40.0% |
| ! | GACCTCTAGATTTTGTAGCA+AGG | + | chr4_2:28486206-28486225 | Msa0596880:intron | 40.0% |
| CTCCTTGCTACAAAATCTAG+AGG | - | chr4_2:28486211-28486230 | None:intergenic | 40.0% | |
| ! | GATTTTGTAGCAAGGAGAGT+AGG | + | chr4_2:28486214-28486233 | Msa0596880:intron | 40.0% |
| GGAGTTTGTAATCTTGGCTT+AGG | + | chr4_2:28486451-28486470 | Msa0596880:intron | 40.0% | |
| ! | TGGCCATGTTTTACCACAAA+GGG | - | chr4_2:28486618-28486637 | None:intergenic | 40.0% |
| ! | TTGGCCATGTTTTACCACAA+AGG | - | chr4_2:28486619-28486638 | None:intergenic | 40.0% |
| ACTGTGGATATGAATTCACC+TGG | - | chr4_2:28486945-28486964 | None:intergenic | 40.0% | |
| GGGTGATAAAGAAGAAACTG+TGG | - | chr4_2:28486961-28486980 | None:intergenic | 40.0% | |
| ! | GGAATACTCCTATTTTCAGC+TGG | - | chr4_2:28487035-28487054 | None:intergenic | 40.0% |
| ACTTCAACATACTTTAGCGG+AGG | - | chr4_2:28487056-28487075 | None:intergenic | 40.0% | |
| TCTATCTTGACCTGTTTCCA+CGG | + | chr4_2:28487394-28487413 | Msa0596880:intron | 40.0% | |
| AAATCGTATGGTCAAAAGGG+GGG | - | chr4_2:28487517-28487536 | None:intergenic | 40.0% | |
| ! | TTGATAATCTCTACAGCCCT+TGG | + | chr4_2:28487743-28487762 | Msa0596880:intron | 40.0% |
| ATTTATGGTGCACAAAGCTG+TGG | + | chr4_2:28487793-28487812 | Msa0596880:CDS | 40.0% | |
| TCAGGTTCATTTACACTGCT+TGG | + | chr4_2:28487828-28487847 | Msa0596880:intron | 40.0% | |
| CTCGTGTTATGTAGAATAGC+TGG | + | chr4_2:28488077-28488096 | Msa0596880:intron | 40.0% | |
| ! | GGTACTTTTAGTCCGTCTAT+AGG | - | chr4_2:28488195-28488214 | None:intergenic | 40.0% |
| ATGCTTCATGCAAATGGAAG+GGG | - | chr4_2:28488334-28488353 | None:intergenic | 40.0% | |
| CATGCTTCATGCAAATGGAA+GGG | - | chr4_2:28488335-28488354 | None:intergenic | 40.0% | |
| ACATGCTTCATGCAAATGGA+AGG | - | chr4_2:28488336-28488355 | None:intergenic | 40.0% | |
| !!! | AATTTTTTCCATTCAGCGCC+TGG | + | chr4_2:28488445-28488464 | Msa0596880:CDS | 40.0% |
| !!! | ATTTTTTCCATTCAGCGCCT+GGG | + | chr4_2:28488446-28488465 | Msa0596880:CDS | 40.0% |
| !!! | TGCTGCTTTTCGAAATTGCA+CGG | + | chr4_2:28488495-28488514 | Msa0596880:CDS | 40.0% |
| CTGCCATTCCTATTTATGGA+TGG | + | chr4_2:28488642-28488661 | Msa0596880:intron | 40.0% | |
| GCACCTTACCATCCATAAAT+AGG | - | chr4_2:28488653-28488672 | None:intergenic | 40.0% | |
| CAAATCAGGAATTGCGTCAA+TGG | - | chr4_2:28489059-28489078 | None:intergenic | 40.0% | |
| CATTGACGCAATTCCTGATT+TGG | + | chr4_2:28489057-28489076 | Msa0596880:CDS | 40.0% | |
| ! | ACCTCTTCTCTTGTTTCGTA+TGG | - | chr4_2:28489160-28489179 | None:intergenic | 40.0% |
| AGAGGTTGTTATATGCGCAT+AGG | + | chr4_2:28489174-28489193 | Msa0596880:CDS | 40.0% | |
| AACTTGGTTTCTCAGTGCAT+GGG | - | chr4_2:28489202-28489221 | None:intergenic | 40.0% | |
| AAACTTGGTTTCTCAGTGCA+TGG | - | chr4_2:28489203-28489222 | None:intergenic | 40.0% | |
| GAAGCTAAAGCAAAACACAG+TGG | + | chr4_2:28489359-28489378 | Msa0596880:three_prime_UTR | 40.0% | |
| TAGGAAAAGGACAAAGGGAA+AGG | + | chr4_2:28489445-28489464 | Msa0596880:three_prime_UTR | 40.0% | |
| ATCGGCGAACTGTGAATTGA+CGG | + | chr4_2:28483885-28483904 | Msa0596880:five_prime_UTR | 45.0% | |
| TGGAAGTGAATGAGGAACAG+AGG | - | chr4_2:28484007-28484026 | None:intergenic | 45.0% | |
| ! | TATGATAAACATGGGGTGCC+TGG | + | chr4_2:28484358-28484377 | Msa0596880:CDS | 45.0% |
| AGTACTCACCTAAACCAAGG+AGG | - | chr4_2:28484397-28484416 | None:intergenic | 45.0% | |
| AACGAAAATGAACGGGGAGA+AGG | + | chr4_2:28485089-28485108 | Msa0596880:intron | 45.0% | |
| AACGGGGAGAAGGAACTAAA+AGG | + | chr4_2:28485099-28485118 | Msa0596880:intron | 45.0% | |
| ACGGGGAGAAGGAACTAAAA+GGG | + | chr4_2:28485100-28485119 | Msa0596880:intron | 45.0% | |
| TTCTGCTCAGGACAGATTCT+TGG | + | chr4_2:28485344-28485363 | Msa0596880:intron | 45.0% | |
| CATCCCATCGTGCTTCAAAT+TGG | + | chr4_2:28485384-28485403 | Msa0596880:CDS | 45.0% | |
| ! | CCTCCAATTTGAAGCACGAT+GGG | - | chr4_2:28485390-28485409 | None:intergenic | 45.0% |
| CCATCGTGCTTCAAATTGGA+GGG | + | chr4_2:28485388-28485407 | Msa0596880:CDS | 45.0% | |
| !! | TAGTCTTATGCTTGACCCGA+AGG | + | chr4_2:28485618-28485637 | Msa0596880:CDS | 45.0% |
| !! | ACAAGGAAAGTTTGTTGCGG+AGG | + | chr4_2:28485738-28485757 | Msa0596880:intron | 45.0% |
| !! | GTGGGAAAAGATGGTGGAAA+AGG | + | chr4_2:28486153-28486172 | Msa0596880:intron | 45.0% |
| !! | GGGAAAAGATGGTGGAAAAG+GGG | + | chr4_2:28486155-28486174 | Msa0596880:intron | 45.0% |
| AAAAGGGGCTTAGGTGGTTT+GGG | + | chr4_2:28486170-28486189 | Msa0596880:intron | 45.0% | |
| GAGGATTGTCAGATCACTAG+AGG | + | chr4_2:28486244-28486263 | Msa0596880:intron | 45.0% | |
| ! | AGGCTTGGTTGTTGTTGTTG+TGG | + | chr4_2:28486404-28486423 | Msa0596880:intron | 45.0% |
| ! | GGCTTGGTTGTTGTTGTTGT+GGG | + | chr4_2:28486405-28486424 | Msa0596880:intron | 45.0% |
| !!! | TGGGGGGAGAGTTTTGTTTT+TGG | + | chr4_2:28486498-28486517 | Msa0596880:intron | 45.0% |
| ! | CCATGTTTTACCACAAAGGG+TGG | - | chr4_2:28486615-28486634 | None:intergenic | 45.0% |
| CCACCCTTTGTGGTAAAACA+TGG | + | chr4_2:28486612-28486631 | Msa0596880:intron | 45.0% | |
| ! | GTAGATAGGAGATAGTGGCT+GGG | - | chr4_2:28486689-28486708 | None:intergenic | 45.0% |
| ! | AGTAGATAGGAGATAGTGGC+TGG | - | chr4_2:28486690-28486709 | None:intergenic | 45.0% |
| GCATTAGCCCAGCTGAAAAT+AGG | + | chr4_2:28487024-28487043 | Msa0596880:CDS | 45.0% | |
| AATCTGGAAAGTCGCGCAAA+AGG | - | chr4_2:28487218-28487237 | None:intergenic | 45.0% | |
| CTATCTTGACCTGTTTCCAC+GGG | + | chr4_2:28487395-28487414 | Msa0596880:intron | 45.0% | |
| TATCTTGACCTGTTTCCACG+GGG | + | chr4_2:28487396-28487415 | Msa0596880:intron | 45.0% | |
| TGTGCAAGATTGCTATGCAG+TGG | + | chr4_2:28487705-28487724 | Msa0596880:intron | 45.0% | |
| TACAGCCCTTGGCATGTATT+GGG | + | chr4_2:28487754-28487773 | Msa0596880:intron | 45.0% | |
| CATGTCCCAATACATGCCAA+GGG | - | chr4_2:28487762-28487781 | None:intergenic | 45.0% | |
| ACATGTCCCAATACATGCCA+AGG | - | chr4_2:28487763-28487782 | None:intergenic | 45.0% | |
| GACTCGGAGTTGGGAAAATA+TGG | + | chr4_2:28487958-28487977 | Msa0596880:CDS | 45.0% | |
| !! | CGCAATTCCTGATTTGGTGT+TGG | + | chr4_2:28489063-28489082 | Msa0596880:CDS | 45.0% |
| ! | TCTCTTGTTTCGTATGGCAG+TGG | - | chr4_2:28489154-28489173 | None:intergenic | 45.0% |
| GCCATACGAAACAAGAGAAG+AGG | + | chr4_2:28489156-28489175 | Msa0596880:CDS | 45.0% | |
| !!! | ACTATTTTATTTTTAAATAT+TGG | + | chr4_2:28488286-28488305 | Msa0596880:intron | 5.0% |
| TCGGCGAACTGTGAATTGAC+GGG | + | chr4_2:28483886-28483905 | Msa0596880:five_prime_UTR | 50.0% | |
| TCTCCTTCTCAATCCGAACC+CGG | + | chr4_2:28483919-28483938 | Msa0596880:five_prime_UTR | 50.0% | |
| AGTAGAACACGCGTTGTCAG+TGG | + | chr4_2:28484520-28484539 | Msa0596880:intron | 50.0% | |
| TGTGGCAACTGGCAATATGG+TGG | + | chr4_2:28484623-28484642 | Msa0596880:intron | 50.0% | |
| GTGGCAACTGGCAATATGGT+GGG | + | chr4_2:28484624-28484643 | Msa0596880:intron | 50.0% | |
| !! | GTGTTGCTCCAATGATGGAC+TGG | + | chr4_2:28484932-28484951 | Msa0596880:intron | 50.0% |
| AGCACGATGGGATGTTGTTC+CGG | - | chr4_2:28485378-28485397 | None:intergenic | 50.0% | |
| CCCATCGTGCTTCAAATTGG+AGG | + | chr4_2:28485387-28485406 | Msa0596880:CDS | 50.0% | |
| ! | CCCTCCAATTTGAAGCACGA+TGG | - | chr4_2:28485391-28485410 | None:intergenic | 50.0% |
| !! | GTCCAGCTACTCTAGGACTT+GGG | - | chr4_2:28485582-28485601 | None:intergenic | 50.0% |
| !! | TGTCCAGCTACTCTAGGACT+TGG | - | chr4_2:28485583-28485602 | None:intergenic | 50.0% |
| AGTCCTAGAGTAGCTGGACA+TGG | + | chr4_2:28485583-28485602 | Msa0596880:CDS | 50.0% | |
| GTCCTAGAGTAGCTGGACAT+GGG | + | chr4_2:28485584-28485603 | Msa0596880:CDS | 50.0% | |
| !! | AGATGGTGGAAAAGGGGCTT+AGG | + | chr4_2:28486161-28486180 | Msa0596880:intron | 50.0% |
| GAAAAGGGGCTTAGGTGGTT+TGG | + | chr4_2:28486169-28486188 | Msa0596880:intron | 50.0% | |
| AGCAAGGAGAGTAGGTCACA+TGG | + | chr4_2:28486222-28486241 | Msa0596880:intron | 50.0% | |
| AAGGAGAGTAGGTCACATGG+AGG | + | chr4_2:28486225-28486244 | Msa0596880:intron | 50.0% | |
| TGTCAGATCACTAGAGGCAG+AGG | + | chr4_2:28486250-28486269 | Msa0596880:intron | 50.0% | |
| ! | AAGCCTTATCCCACTACGTG+GGG | - | chr4_2:28486390-28486409 | None:intergenic | 50.0% |
| ! | CAAGCCTTATCCCACTACGT+GGG | - | chr4_2:28486391-28486410 | None:intergenic | 50.0% |
| TTTGGTAGGACCACCCTTTG+TGG | + | chr4_2:28486602-28486621 | Msa0596880:intron | 50.0% | |
| TGAGCAGTGCCTTCCTTGAA+TGG | - | chr4_2:28487001-28487020 | None:intergenic | 50.0% | |
| !! | TCAAGGAAGGCACTGCTCAA+TGG | + | chr4_2:28487002-28487021 | Msa0596880:CDS | 50.0% |
| !! | GGGGCTCATGGTGTTATGAT+TGG | + | chr4_2:28487453-28487472 | Msa0596880:CDS | 50.0% |
| CTACAGCCCTTGGCATGTAT+TGG | + | chr4_2:28487753-28487772 | Msa0596880:intron | 50.0% | |
| TTCACGATGTCTCGCACAGT+TGG | - | chr4_2:28487991-28488010 | None:intergenic | 50.0% | |
| AACTGTGCGAGACATCGTGA+AGG | + | chr4_2:28487990-28488009 | Msa0596880:CDS | 50.0% | |
| TCATGCAAATGGAAGGGGTG+AGG | - | chr4_2:28488329-28488348 | None:intergenic | 50.0% | |
| GGCTGCAGTGATAACAGACA+TGG | - | chr4_2:28488418-28488437 | None:intergenic | 50.0% | |
| GGATGGTAAGGTGCATGCTA+TGG | + | chr4_2:28488659-28488678 | Msa0596880:intron | 50.0% | |
| TGGTAAGGTGCATGCTATGG+TGG | + | chr4_2:28488662-28488681 | Msa0596880:intron | 50.0% | |
| AGGTGCATGCTATGGTGGTA+TGG | + | chr4_2:28488667-28488686 | Msa0596880:intron | 50.0% | |
| GGCGAATCCAACACCAAATC+AGG | - | chr4_2:28489073-28489092 | None:intergenic | 50.0% | |
| ! | GGTGTTGGATTCGCCTGTTT+CGG | + | chr4_2:28489078-28489097 | Msa0596880:CDS | 50.0% |
| AAAAGATCTGTGCGGCCAAG+AGG | - | chr4_2:28489109-28489128 | None:intergenic | 50.0% | |
| ! | ATGGAAACTTGCTTCGGCGC+CGG | - | chr4_2:28483941-28483960 | None:intergenic | 55.0% |
| TGCCCAAGTCCTAGAGTAGC+TGG | + | chr4_2:28485577-28485596 | Msa0596880:CDS | 55.0% | |
| GACCCATGTCCAGCTACTCT+AGG | - | chr4_2:28485589-28485608 | None:intergenic | 55.0% | |
| GTAGCTGGACATGGGTCCTT+TGG | + | chr4_2:28485592-28485611 | Msa0596880:CDS | 55.0% | |
| TGGTGGAAAAGGGGCTTAGG+TGG | + | chr4_2:28486164-28486183 | Msa0596880:intron | 55.0% | |
| ACTACGTGGGGTTGCCTACA+TGG | - | chr4_2:28486378-28486397 | None:intergenic | 55.0% | |
| ATGTAGGCAACCCCACGTAG+TGG | + | chr4_2:28486377-28486396 | Msa0596880:intron | 55.0% | |
| TGTAGGCAACCCCACGTAGT+GGG | + | chr4_2:28486378-28486397 | Msa0596880:intron | 55.0% | |
| ! | CAACCCCACGTAGTGGGATA+AGG | + | chr4_2:28486384-28486403 | Msa0596880:intron | 55.0% |
| ! | CCAAGCCTTATCCCACTACG+TGG | - | chr4_2:28486392-28486411 | None:intergenic | 55.0% |
| ! | CCACGTAGTGGGATAAGGCT+TGG | + | chr4_2:28486389-28486408 | Msa0596880:intron | 55.0% |
| ATCGAAGTCCCCGTGGAAAC+AGG | - | chr4_2:28487407-28487426 | None:intergenic | 55.0% | |
| TCCACGGGGACTTCGATTGT+AGG | + | chr4_2:28487410-28487429 | Msa0596880:intron | 55.0% | |
| ACCTACAATCGAAGTCCCCG+TGG | - | chr4_2:28487414-28487433 | None:intergenic | 55.0% | |
| TCAATGCAGCACGAGACGCT+GGG | + | chr4_2:28487433-28487452 | Msa0596880:CDS | 55.0% | |
| ! | CTGTGGTCTTACACGTCGTC+AGG | + | chr4_2:28487810-28487829 | Msa0596880:CDS | 55.0% |
| AGTCTATGGGGACTCGGAGT+TGG | + | chr4_2:28487948-28487967 | Msa0596880:CDS | 55.0% | |
| GTCTATGGGGACTCGGAGTT+GGG | + | chr4_2:28487949-28487968 | Msa0596880:CDS | 55.0% | |
| TGTGCGAGACATCGTGAAGG+TGG | + | chr4_2:28487993-28488012 | Msa0596880:intron | 55.0% | |
| GTGCGAGACATCGTGAAGGT+GGG | + | chr4_2:28487994-28488013 | Msa0596880:intron | 55.0% | |
| GCAAATGGAAGGGGTGAGGA+GGG | - | chr4_2:28488325-28488344 | None:intergenic | 55.0% | |
| TGCAAATGGAAGGGGTGAGG+AGG | - | chr4_2:28488326-28488345 | None:intergenic | 55.0% | |
| TTCCATTCAGCGCCTGGGAA+TGG | + | chr4_2:28488451-28488470 | Msa0596880:CDS | 55.0% | |
| ! | TGGACAGTGGAAGCGCAATG+CGG | + | chr4_2:28488471-28488490 | Msa0596880:CDS | 55.0% |
| CCAAGAGGTGGTTCCGAAAC+AGG | - | chr4_2:28489094-28489113 | None:intergenic | 55.0% | |
| CCTGTTTCGGAACCACCTCT+TGG | + | chr4_2:28489091-28489110 | Msa0596880:CDS | 55.0% | |
| ! | TGGAAACTTGCTTCGGCGCC+GGG | - | chr4_2:28483940-28483959 | None:intergenic | 60.0% |
| GTCAATGCAGCACGAGACGC+TGG | + | chr4_2:28487432-28487451 | Msa0596880:CDS | 60.0% | |
| CAATGCAGCACGAGACGCTG+GGG | + | chr4_2:28487434-28487453 | Msa0596880:CDS | 60.0% | |
| !! | GTCCATTCCCAGGCGCTGAA+TGG | - | chr4_2:28488456-28488475 | None:intergenic | 60.0% |
| CGCTTCCACTGTCCATTCCC+AGG | - | chr4_2:28488466-28488485 | None:intergenic | 60.0% | |
| AGATCTGTGCGGCCAAGAGG+TGG | - | chr4_2:28489106-28489125 | None:intergenic | 60.0% | |
| GCGCCGGGTTCGGATTGAGA+AGG | - | chr4_2:28483925-28483944 | None:intergenic | 65.0% | |
| ! | ACTTGCTTCGGCGCCGGGTT+CGG | - | chr4_2:28483935-28483954 | None:intergenic | 65.0% |
| CAGCGCCTGGGAATGGACAG+TGG | + | chr4_2:28488458-28488477 | Msa0596880:CDS | 65.0% | |
| GCACGAGACGCTGGGGCTCA+TGG | + | chr4_2:28487441-28487460 | Msa0596880:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 28483853 | 28489491 | 28483853 | ID=Msa0596880;Name=Msa0596880 |
| chr4_2 | mRNA | 28483853 | 28489491 | 28483853 | ID=Msa0596880-mRNA-1;Parent=Msa0596880;Name=Msa0596880-mRNA-1;_AED=0.16;_eAED=0.16;_QI=154|1|1|1|0.84|0.71|14|276|434 |
| chr4_2 | exon | 28483853 | 28483967 | 28483853 | ID=Msa0596880-mRNA-1:exon:7298;Parent=Msa0596880-mRNA-1 |
| chr4_2 | exon | 28484154 | 28484407 | 28484154 | ID=Msa0596880-mRNA-1:exon:7299;Parent=Msa0596880-mRNA-1 |
| chr4_2 | exon | 28484933 | 28485059 | 28484933 | ID=Msa0596880-mRNA-1:exon:7300;Parent=Msa0596880-mRNA-1 |
| chr4_2 | exon | 28485354 | 28485481 | 28485354 | ID=Msa0596880-mRNA-1:exon:7301;Parent=Msa0596880-mRNA-1 |
| chr4_2 | exon | 28485570 | 28485639 | 28485570 | ID=Msa0596880-mRNA-1:exon:7302;Parent=Msa0596880-mRNA-1 |
| chr4_2 | exon | 28485748 | 28485850 | 28485748 | ID=Msa0596880-mRNA-1:exon:7303;Parent=Msa0596880-mRNA-1 |
| chr4_2 | exon | 28486946 | 28487063 | 28486946 | ID=Msa0596880-mRNA-1:exon:7304;Parent=Msa0596880-mRNA-1 |
| chr4_2 | exon | 28487197 | 28487278 | 28487197 | ID=Msa0596880-mRNA-1:exon:7305;Parent=Msa0596880-mRNA-1 |
| chr4_2 | exon | 28487432 | 28487493 | 28487432 | ID=Msa0596880-mRNA-1:exon:7306;Parent=Msa0596880-mRNA-1 |
| chr4_2 | exon | 28487759 | 28487831 | 28487759 | ID=Msa0596880-mRNA-1:exon:7307;Parent=Msa0596880-mRNA-1 |
| chr4_2 | exon | 28487931 | 28488011 | 28487931 | ID=Msa0596880-mRNA-1:exon:7308;Parent=Msa0596880-mRNA-1 |
| chr4_2 | exon | 28488436 | 28488516 | 28488436 | ID=Msa0596880-mRNA-1:exon:7309;Parent=Msa0596880-mRNA-1 |
| chr4_2 | exon | 28489031 | 28489291 | 28489031 | ID=Msa0596880-mRNA-1:exon:7310;Parent=Msa0596880-mRNA-1 |
| chr4_2 | exon | 28489312 | 28489491 | 28489312 | ID=Msa0596880-mRNA-1:exon:7311;Parent=Msa0596880-mRNA-1 |
| chr4_2 | five_prime_UTR | 28483853 | 28483967 | 28483853 | ID=Msa0596880-mRNA-1:five_prime_utr;Parent=Msa0596880-mRNA-1 |
| chr4_2 | five_prime_UTR | 28484154 | 28484192 | 28484154 | ID=Msa0596880-mRNA-1:five_prime_utr;Parent=Msa0596880-mRNA-1 |
| chr4_2 | CDS | 28484193 | 28484407 | 28484193 | ID=Msa0596880-mRNA-1:cds;Parent=Msa0596880-mRNA-1 |
| chr4_2 | CDS | 28484933 | 28485059 | 28484933 | ID=Msa0596880-mRNA-1:cds;Parent=Msa0596880-mRNA-1 |
| chr4_2 | CDS | 28485354 | 28485481 | 28485354 | ID=Msa0596880-mRNA-1:cds;Parent=Msa0596880-mRNA-1 |
| chr4_2 | CDS | 28485570 | 28485639 | 28485570 | ID=Msa0596880-mRNA-1:cds;Parent=Msa0596880-mRNA-1 |
| chr4_2 | CDS | 28485748 | 28485850 | 28485748 | ID=Msa0596880-mRNA-1:cds;Parent=Msa0596880-mRNA-1 |
| chr4_2 | CDS | 28486946 | 28487063 | 28486946 | ID=Msa0596880-mRNA-1:cds;Parent=Msa0596880-mRNA-1 |
| chr4_2 | CDS | 28487197 | 28487278 | 28487197 | ID=Msa0596880-mRNA-1:cds;Parent=Msa0596880-mRNA-1 |
| chr4_2 | CDS | 28487432 | 28487493 | 28487432 | ID=Msa0596880-mRNA-1:cds;Parent=Msa0596880-mRNA-1 |
| chr4_2 | CDS | 28487759 | 28487831 | 28487759 | ID=Msa0596880-mRNA-1:cds;Parent=Msa0596880-mRNA-1 |
| chr4_2 | CDS | 28487931 | 28488011 | 28487931 | ID=Msa0596880-mRNA-1:cds;Parent=Msa0596880-mRNA-1 |
| chr4_2 | CDS | 28488436 | 28488516 | 28488436 | ID=Msa0596880-mRNA-1:cds;Parent=Msa0596880-mRNA-1 |
| chr4_2 | CDS | 28489031 | 28489195 | 28489031 | ID=Msa0596880-mRNA-1:cds;Parent=Msa0596880-mRNA-1 |
| chr4_2 | three_prime_UTR | 28489196 | 28489291 | 28489196 | ID=Msa0596880-mRNA-1:three_prime_utr;Parent=Msa0596880-mRNA-1 |
| chr4_2 | three_prime_UTR | 28489312 | 28489491 | 28489312 | ID=Msa0596880-mRNA-1:three_prime_utr;Parent=Msa0596880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
