AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1383940


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1383940 MtrunA17_Chr6g0468661 96.256 454 15 2 24 477 1 452 0.0 853
Msa1383940 MtrunA17_Chr1g0202721 61.330 406 152 1 77 477 42 447 6.10e-165 473
Msa1383940 MtrunA17_Chr7g0238521 85.047 107 4 1 371 477 20 114 2.13e-38 135
Msa1383940 MtrunA17_Chr8g0351831 72.917 48 13 0 176 223 16 63 3.46e-12 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1383940 AT5G24000.1 63.309 417 142 2 72 477 27 443 2.91e-174 497
Msa1383940 AT5G52540.1 59.535 430 167 3 51 477 36 461 8.01e-160 461

Find 110 sgRNAs with CRISPR-Local

Find 346 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTTCAGCATTGGTGCTTT+TGG 0.137500 tig0020632:-130039 Msa1383940:CDS
AATGCAGTTGCTACTATAAT+TGG 0.182067 tig0020632:-128733 Msa1383940:intron
ATCCATCTTCTTATCGTTCT+TGG 0.182174 tig0020632:-124958 Msa1383940:CDS
CTTCTTATCGTTCTTGGATT+AGG 0.244995 tig0020632:-124952 Msa1383940:CDS
ACTATTCCATTGCTATTGTT+TGG 0.277840 tig0020632:-129051 Msa1383940:CDS
ATATACACAATACACCTTAT+TGG 0.282182 tig0020632:-124702 Msa1383940:three_prime_UTR
TTAGCATCAAACGCGAATAT+TGG 0.287334 tig0020632:-124895 Msa1383940:CDS
CTTCTAGTAGCTTTCTTACT+TGG 0.307651 tig0020632:-128991 Msa1383940:CDS
GCATATGACGTTCGAAAATC+AGG 0.318696 tig0020632:-126743 Msa1383940:CDS
GAAAATAGCAGCAGCTCTAA+TGG 0.337468 tig0020632:-128656 Msa1383940:CDS
GCTCTAATGGGAAGCTATAT+TGG 0.346052 tig0020632:-128643 Msa1383940:CDS
CGAATGATCATTGGGGTGTT+TGG 0.346995 tig0020632:-130068 Msa1383940:CDS
GATCTCTTGGTCCCGACAAC+TGG 0.355480 tig0020632:-128678 Msa1383940:CDS
GTTGTTCCTGGAATTCTTAC+CGG 0.358415 tig0020632:-124820 Msa1383940:CDS
TGGGAATCTTTAGTTGTTCC+TGG 0.360735 tig0020632:-124832 Msa1383940:CDS
TGAATATACTTGGGGCAGTT+TGG 0.369634 tig0020632:+125004 None:intergenic
AGGTCGGAGAAGACTAAAAT+TGG 0.371166 tig0020632:-129192 Msa1383940:CDS
AATCAAGTAGTTCGTTCAAC+TGG 0.371646 tig0020632:-129018 Msa1383940:CDS
ACATACTTAACAAAATTATA+CGG 0.373938 tig0020632:-126655 Msa1383940:CDS
GTAGCTTTCTTACTTGGGTC+AGG 0.379296 tig0020632:-128985 Msa1383940:intron
CATATCTCCGAATGATCATT+GGG 0.390647 tig0020632:-130076 Msa1383940:CDS
ATACAAGGAGGTACTCTTCC+AGG 0.393679 tig0020632:-126631 Msa1383940:CDS
CAAACCAAGCGCCTCTGAAA+TGG 0.395191 tig0020632:+127501 None:intergenic
GGACTTGCGGCAAGTAATCT+TGG 0.403242 tig0020632:-129132 Msa1383940:CDS
CAGTGACAGGTGGGTGTTTG+AGG 0.407502 tig0020632:+130307 None:intergenic
GCAGTAGCTGTCTGCAACAC+TGG 0.407599 tig0020632:+126712 None:intergenic
TCATATCTCCGAATGATCAT+TGG 0.415485 tig0020632:-130077 Msa1383940:CDS
GCCATTCCACAAGCTGTTGT+AGG 0.418638 tig0020632:+124868 Msa1383930:CDS
GGAGATTGTGAAATGATGAT+AGG 0.420956 tig0020632:+130356 None:intergenic
AAAATGCCGGTAAGAATTCC+AGG 0.431345 tig0020632:+124814 Msa1383930:CDS
TGCTGGTCATACTGTTGCCT+TGG 0.431355 tig0020632:-126545 Msa1383940:CDS
GTTGGTGGGGCAGTCTCTGC+AGG 0.447311 tig0020632:+127388 None:intergenic
AAAATAGCAGCAGCTCTAAT+GGG 0.462838 tig0020632:-128655 Msa1383940:CDS
AAGTATATTCATGTTTGCAC+TGG 0.466227 tig0020632:-124992 Msa1383940:CDS
TGTTGCCTTGGTCTTGATGC+AGG 0.478138 tig0020632:-126533 Msa1383940:intron
TGATCATTCGGAGATATGAT+AGG 0.480338 tig0020632:+130081 None:intergenic
TTCTAGTAGCTTTCTTACTT+GGG 0.482121 tig0020632:-128990 Msa1383940:CDS
AATAGCAATGGAATAGTAAG+AGG 0.484012 tig0020632:+129057 None:intergenic
GCATCAAACGCGAATATTGG+CGG 0.493349 tig0020632:-124892 Msa1383940:CDS
ATAGTGCCTATGAGATCTCT+TGG 0.500927 tig0020632:-128691 Msa1383940:CDS
AGTGCAAACATGAATATACT+TGG 0.504219 tig0020632:+124994 None:intergenic
TGAGGTTGTAGTACGAGGTT+CGG 0.504390 tig0020632:+130192 None:intergenic
TTTGTGGTGGTTGGAGCTAG+TGG 0.504573 tig0020632:-125045 Msa1383940:CDS
ACCGGCATATTCTATTGTCT+TGG 0.505721 tig0020632:-129091 Msa1383940:CDS
CCATTCCACAAGCTGTTGTA+GGG 0.506074 tig0020632:+124869 Msa1383930:CDS
TGGCGTGATGGGATTGGTTG+TGG 0.507610 tig0020632:+130273 None:intergenic
CGGAATGATACGTGGCGTGA+TGG 0.509564 tig0020632:+130261 None:intergenic
CGGACATGAATTGAGGATGT+TGG 0.510088 tig0020632:+130212 None:intergenic
TGGTCTGCTATCTTCAGCAT+TGG 0.510382 tig0020632:-130048 Msa1383940:CDS
CAAACACCCCAATGATCATT+CGG 0.518394 tig0020632:+130069 None:intergenic
TGTGGAATGGCTAAGGCTAA+AGG 0.521502 tig0020632:-124856 Msa1383940:CDS
GTGCAAACATGAATATACTT+GGG 0.524524 tig0020632:+124995 None:intergenic
ATCCAAGAACGATAAGAAGA+TGG 0.530526 tig0020632:+124956 Msa1383930:CDS
CGTGATGGGATTGGTTGTGG+TGG 0.530923 tig0020632:+130276 None:intergenic
ACAATGATTGCAGTTACTCC+TGG 0.532244 tig0020632:+126613 None:intergenic
ATTAGTCCGCTTATACCTGC+TGG 0.532420 tig0020632:-126562 Msa1383940:CDS
GAGATTGTGAAATGATGATA+GGG 0.533250 tig0020632:+130357 None:intergenic
GATACGTGGCGTGATGGGAT+TGG 0.533559 tig0020632:+130267 None:intergenic
GAATGGTACCAGTGGTTGGT+GGG 0.534355 tig0020632:+127374 None:intergenic
GAATGGCTAAGGCTAAAGGC+TGG 0.544445 tig0020632:-124852 Msa1383940:CDS
AAATGATGATAGGGAGTTGA+AGG 0.546060 tig0020632:+130366 None:intergenic
CCCTACAACAGCTTGTGGAA+TGG 0.546445 tig0020632:-124869 Msa1383940:CDS
GTTGCCATTTCAGAGGCGCT+TGG 0.549654 tig0020632:-127505 Msa1383940:CDS
GCTTTAGTGAGCACATTAGT+CGG 0.551269 tig0020632:-129153 Msa1383940:CDS
GGAATGATACGTGGCGTGAT+GGG 0.553809 tig0020632:+130262 None:intergenic
ATAAGCGGACTAATCAGCTT+CGG 0.554124 tig0020632:+126571 None:intergenic
AACAGCTTGTGGAATGGCTA+AGG 0.555634 tig0020632:-124863 Msa1383940:CDS
CGAGGTTCGGACATGAATTG+AGG 0.564019 tig0020632:+130205 None:intergenic
GCAATTGATGAGGTAGGAGA+TGG 0.568992 tig0020632:+124602 Msa1383930:intron
GAAGACTAAAATTGGTAGCA+TGG 0.569366 tig0020632:-129184 Msa1383940:CDS
CATTGGTGTCTCTGTGTGTG+TGG 0.570482 tig0020632:+130335 None:intergenic
ATTAGAATGGTACCAGTGGT+TGG 0.572068 tig0020632:+127370 None:intergenic
AATTCTTCCACATGATGCAC+CGG 0.574454 tig0020632:-129109 Msa1383940:CDS
AATGGTACCAGTGGTTGGTG+GGG 0.574598 tig0020632:+127375 None:intergenic
TTTGCTCCAAACAATAGCAA+TGG 0.576769 tig0020632:+129045 None:intergenic
AAGGCAACAGTATGACCAGC+AGG 0.578651 tig0020632:+126547 None:intergenic
GGCGGCCCTACAACAGCTTG+TGG 0.579346 tig0020632:-124874 Msa1383940:CDS
TCGGGACCAAGAGATCTCAT+AGG 0.580258 tig0020632:+128685 None:intergenic
AGAATGGTACCAGTGGTTGG+TGG 0.584846 tig0020632:+127373 None:intergenic
GGGTGTTTGAGGAGAGACAT+TGG 0.585033 tig0020632:+130318 None:intergenic
GAATATGCCGGTGCATCATG+TGG 0.585225 tig0020632:+129102 None:intergenic
ACATGAATTGAGGATGTTGG+AGG 0.585952 tig0020632:+130215 None:intergenic
ATTGTTGTAGTGGTGTGTTG+AGG 0.587057 tig0020632:+130174 None:intergenic
CTAATGGGAAGCTATATTGG+TGG 0.587449 tig0020632:-128640 Msa1383940:CDS
GAGACTGCCCCACCAACCAC+TGG 0.588231 tig0020632:-127382 Msa1383940:intron
CATATGACGTTCGAAAATCA+GGG 0.588608 tig0020632:-126742 Msa1383940:CDS
AATTACCTCGTATCTGTCAA+AGG 0.593217 tig0020632:-130154 Msa1383940:CDS
ATACGAGGTAATTGTTGTAG+TGG 0.597771 tig0020632:+130164 None:intergenic
AATCATGCAATTGATGAGGT+AGG 0.598765 tig0020632:+124596 Msa1383930:intron
TAATTATGTTGCCATTTCAG+AGG 0.603851 tig0020632:-127512 Msa1383940:CDS
TCCAAGACAATAGAATATGC+CGG 0.604479 tig0020632:+129090 None:intergenic
AATCAGCTTCGGTGCAAGAG+TGG 0.604525 tig0020632:+126582 None:intergenic
ACAAAATTATACGGTATACA+AGG 0.605332 tig0020632:-126646 Msa1383940:CDS
AATGGCTAAGGCTAAAGGCT+GGG 0.614901 tig0020632:-124851 Msa1383940:CDS
ATCTAGTACAGAGAGAATGT+CGG 0.620043 tig0020632:+130241 None:intergenic
GAGCACATTAGTCGGACTTG+CGG 0.623258 tig0020632:-129145 Msa1383940:CDS
GTATGACCAGCAGGTATAAG+CGG 0.623361 tig0020632:+126556 None:intergenic
TGTTACCTGCATCAAGACCA+AGG 0.628334 tig0020632:+126528 None:intergenic
GAGAGAGAACAGTGACAGGT+GGG 0.631941 tig0020632:+130298 None:intergenic
TCGTAATCATGCAATTGATG+AGG 0.646397 tig0020632:+124592 Msa1383930:intron
TGCAAACATGAATATACTTG+GGG 0.655619 tig0020632:+124996 None:intergenic
GGTGGAGAGAGAACAGTGAC+AGG 0.664373 tig0020632:+130294 None:intergenic
GAGAATGTCGGAATGATACG+TGG 0.677053 tig0020632:+130253 None:intergenic
GGAGAGAGAACAGTGACAGG+TGG 0.683656 tig0020632:+130297 None:intergenic
TGTGTTGAGGTTGTAGTACG+AGG 0.701267 tig0020632:+130187 None:intergenic
ATATGACGTTCGAAAATCAG+GGG 0.715008 tig0020632:-126741 Msa1383940:CDS
ACAACACTTCGAGTTAAACG+AGG 0.729919 tig0020632:+130129 None:intergenic
AAATTATACGGTATACAAGG+AGG 0.733912 tig0020632:-126643 Msa1383940:CDS
ATATCTCCGAATGATCATTG+GGG 0.737045 tig0020632:-130075 Msa1383940:CDS
AGGTTCCTTTGACAGATACG+AGG 0.742128 tig0020632:+130149 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTCATTGATTTTTATAA+TGG - tig0020632:127366-127385 Msa1383940:intron 10.0%
!!! AATAGTTTTGATTTAATATT+TGG - tig0020632:127718-127737 Msa1383940:intron 10.0%
!!! ATGATAATGATATTTTAATT+TGG - tig0020632:127749-127768 Msa1383940:intron 10.0%
!!! TGATAATGATATTTTAATTT+GGG - tig0020632:127750-127769 Msa1383940:intron 10.0%
!!! TATCATTTTATAAATAATAC+TGG + tig0020632:127838-127857 None:intergenic 10.0%
!! AGTATTATTTATAAAATGAT+AGG - tig0020632:127837-127856 Msa1383940:intron 10.0%
!! TTATATTATTGAATGTAAAT+AGG - tig0020632:129490-129509 Msa1383940:intron 10.0%
!! TATCTATTTATCTATACAAA+TGG - tig0020632:126009-126028 Msa1383940:intron 15.0%
!! CAATAGTAATTAGAAAAAAA+TGG + tig0020632:126096-126115 None:intergenic 15.0%
!!! CATTTTTTTCTAATTACTAT+TGG - tig0020632:126094-126113 Msa1383940:intron 15.0%
!!! GATGTATTTTAAATTCAATT+TGG + tig0020632:126949-126968 None:intergenic 15.0%
!! AATAAGATAGATGAAAATAA+TGG - tig0020632:127873-127892 Msa1383940:intron 15.0%
!! ATAAGATAGATGAAAATAAT+GGG - tig0020632:127874-127893 Msa1383940:intron 15.0%
!! TAAGATATTTATCATGATTA+TGG - tig0020632:127932-127951 Msa1383940:intron 15.0%
!! ACATACTTAACAAAATTATA+CGG - tig0020632:128302-128321 Msa1383940:intron 15.0%
!!! TGCTTTTTGTAATTTTTTTT+AGG - tig0020632:128583-128602 Msa1383940:intron 15.0%
!! TTGTATTATTGAATGTAAAT+AGG + tig0020632:129404-129423 None:intergenic 15.0%
!! ATCATATCATATCAATTAAA+AGG + tig0020632:129739-129758 None:intergenic 15.0%
!! AAAATGAAAAGATAAAAGAG+AGG + tig0020632:124975-124994 None:intergenic 20.0%
!!! TCTTTTCATTTTGTGTAATT+TGG - tig0020632:124983-125002 Msa1383940:CDS 20.0%
!! ACATTATTGTTAAATAAGCT+TGG + tig0020632:125183-125202 None:intergenic 20.0%
!! TTGACTAAAAAATATCTGTT+TGG - tig0020632:125263-125282 Msa1383940:intron 20.0%
!!! ATTCAATTAGTTTTAAACTG+CGG - tig0020632:125530-125549 Msa1383940:intron 20.0%
!! ATTTGTACAACTATATAAAG+TGG - tig0020632:125633-125652 Msa1383940:intron 20.0%
!! AGTAATTAGAAAAAAATGGA+TGG + tig0020632:126092-126111 None:intergenic 20.0%
!!! ACAATAGTTCTATAAATATG+CGG + tig0020632:126487-126506 None:intergenic 20.0%
!! CAATTTATAACTATACATGT+AGG - tig0020632:126667-126686 Msa1383940:CDS 20.0%
!!! AAAAACATATCGGTTATTAT+AGG + tig0020632:126756-126775 None:intergenic 20.0%
!!! ACAAAGTCAAGTTTTTTAAT+GGG + tig0020632:127297-127316 None:intergenic 20.0%
!!! TACAAAGTCAAGTTTTTTAA+TGG + tig0020632:127298-127317 None:intergenic 20.0%
!!! ATATTTTCTTGCAACTATAT+GGG - tig0020632:127319-127338 Msa1383940:intron 20.0%
!! AGAAACAGTTTATATTAGAA+TGG + tig0020632:127603-127622 None:intergenic 20.0%
!!! TAATGATATTTTAATTTGGG+CGG - tig0020632:127753-127772 Msa1383940:intron 20.0%
!! CAAAGATTATTCATAAAATC+AGG + tig0020632:128181-128200 None:intergenic 20.0%
!! TCAAAAAACAATGTTCAATA+TGG - tig0020632:128883-128902 Msa1383940:intron 20.0%
!!! AGTTTTAGTTATAAAAGAGA+GGG - tig0020632:129223-129242 Msa1383940:intron 20.0%
!! TTGATCATAATTCTAAATTG+TGG - tig0020632:129434-129453 Msa1383940:intron 20.0%
!! ATTTCTTTATCTTGAATTTC+CGG + tig0020632:129471-129490 None:intergenic 20.0%
!! ATCATATCAATTAGTACATA+TGG + tig0020632:129820-129839 None:intergenic 20.0%
!! GATACTCTTGTAAAAATTTA+AGG - tig0020632:129837-129856 Msa1383940:intron 20.0%
!! TAAAAACATAACTTCCAATA+AGG + tig0020632:130272-130291 None:intergenic 20.0%
! TTCCTAATTCCATTTCTTTA+TGG - tig0020632:125017-125036 Msa1383940:CDS 25.0%
! AACCATAAAGAAATGGAATT+AGG + tig0020632:125022-125041 None:intergenic 25.0%
!!! TTTATGGTTTGTTGAGAAAT+AGG - tig0020632:125033-125052 Msa1383940:CDS 25.0%
!!! AGTAGCTTTTTTTTTTACAG+AGG + tig0020632:125368-125387 None:intergenic 25.0%
!! ACCGTTAATTTTATCAAACA+CGG - tig0020632:125391-125410 Msa1383940:intron 25.0%
! AACTAACACTCTATTATAGT+GGG + tig0020632:125684-125703 None:intergenic 25.0%
! AAACTAACACTCTATTATAG+TGG + tig0020632:125685-125704 None:intergenic 25.0%
!!! ATTTGTTGTTGTGAAATACA+AGG - tig0020632:125745-125764 Msa1383940:intron 25.0%
! GATAAAATCAAACAATCAGA+AGG + tig0020632:126462-126481 None:intergenic 25.0%
! TTTAAATGCCAGATACTTAT+AGG - tig0020632:126709-126728 Msa1383940:CDS 25.0%
! TTAAATGCCAGATACTTATA+GGG - tig0020632:126710-126729 Msa1383940:CDS 25.0%
! TATTATAGGCATGTAATCTA+TGG + tig0020632:126742-126761 None:intergenic 25.0%
!! GTGTTTTGTCAAAAACATAT+CGG + tig0020632:126766-126785 None:intergenic 25.0%
! TGAAGCAAATACTTTATTGA+AGG + tig0020632:126830-126849 None:intergenic 25.0%
!! AAAGTATTTGCTTCAAAATC+AGG - tig0020632:126835-126854 Msa1383940:intron 25.0%
! AAGTATTTGCTTCAAAATCA+GGG - tig0020632:126836-126855 Msa1383940:intron 25.0%
!! GAGTTTGGTTAACTAATTTT+GGG + tig0020632:127101-127120 None:intergenic 25.0%
!!! CAAAGTCAAGTTTTTTAATG+GGG + tig0020632:127296-127315 None:intergenic 25.0%
!! CATATTTTCTTGCAACTATA+TGG - tig0020632:127318-127337 Msa1383940:intron 25.0%
!!! TATCACTGCTCTTTATTTTA+TGG - tig0020632:127520-127539 Msa1383940:intron 25.0%
! AATATTCATTCCACAAATTC+TGG + tig0020632:127648-127667 None:intergenic 25.0%
!!! AATGATATTTTAATTTGGGC+GGG - tig0020632:127754-127773 Msa1383940:intron 25.0%
!!! TCTCTAAAACATTTAAACCA+CGG - tig0020632:128035-128054 Msa1383940:intron 25.0%
! ACAAAATTATACGGTATACA+AGG - tig0020632:128311-128330 Msa1383940:intron 25.0%
!!! TTTGTTGATTCTATTTTGAG+TGG - tig0020632:128458-128477 Msa1383940:intron 25.0%
! AGTGAAAACCTTAACATAAA+TGG + tig0020632:128799-128818 None:intergenic 25.0%
!! TGTTAAGGTTTTCACTAAAT+TGG - tig0020632:128803-128822 Msa1383940:intron 25.0%
! ACACACTGTTATAAAATAGA+GGG + tig0020632:128976-128995 None:intergenic 25.0%
! TATAAGCTTGTAGAAATTGT+TGG - tig0020632:129110-129129 Msa1383940:CDS 25.0%
! CAAATAGTTGCAATATCTAT+TGG - tig0020632:129137-129156 Msa1383940:CDS 25.0%
!!! GAGTTTTAGTTATAAAAGAG+AGG - tig0020632:129222-129241 Msa1383940:intron 25.0%
!!! AAGTTTGTTAAGAGTTGTTA+AGG - tig0020632:129271-129290 Msa1383940:intron 25.0%
! TTTCTTTATCTTGAATTTCC+GGG + tig0020632:129470-129489 None:intergenic 25.0%
!! GTTTCAATTGCAACATTTTT+AGG - tig0020632:130170-130189 Msa1383940:CDS 25.0%
!!! ATTGCAACATTTTTAGGTAT+TGG - tig0020632:130176-130195 Msa1383940:CDS 25.0%
!!! ACATTTTTAGGTATTGGTTT+TGG - tig0020632:130182-130201 Msa1383940:CDS 25.0%
! ATATACACAATACACCTTAT+TGG - tig0020632:130255-130274 Msa1383940:CDS 25.0%
!! TCATGAGAAATTTTGTCAAA+AGG + tig0020632:130311-130330 None:intergenic 25.0%
GAGATTGTGAAATGATGATA+GGG + tig0020632:124603-124622 Msa1383930:intron 30.0%
CTCAACAAACCATAAAGAAA+TGG + tig0020632:125029-125048 None:intergenic 30.0%
GCCGTGTTTGATAAAATTAA+CGG + tig0020632:125395-125414 None:intergenic 30.0%
! CTTTGTTTGGGAAAAAATAG+TGG + tig0020632:125498-125517 None:intergenic 30.0%
! TTTTTCCCAAACAAAGCATA+AGG - tig0020632:125502-125521 Msa1383940:intron 30.0%
! TTTTCCCAAACAAAGCATAA+GGG - tig0020632:125503-125522 Msa1383940:intron 30.0%
!! ATAGTGGGTAAATAGTATAG+TGG + tig0020632:125669-125688 None:intergenic 30.0%
AATAGCAATGGAATAGTAAG+AGG + tig0020632:125903-125922 None:intergenic 30.0%
! ACTATTCCATTGCTATTGTT+TGG - tig0020632:125906-125925 Msa1383940:intron 30.0%
TTCTAGTAGCTTTCTTACTT+GGG - tig0020632:125967-125986 Msa1383940:intron 30.0%
AACATCAGAATCAGTTTCAT+TGG + tig0020632:126200-126219 None:intergenic 30.0%
AATGCAGTTGCTACTATAAT+TGG - tig0020632:126224-126243 Msa1383940:intron 30.0%
TGATTGGAGTTGCTTATTTA+TGG + tig0020632:126433-126452 None:intergenic 30.0%
TGAAAGTTGAGTATACATTG+TGG - tig0020632:126562-126581 Msa1383940:CDS 30.0%
TAAATGCCAGATACTTATAG+GGG - tig0020632:126711-126730 Msa1383940:CDS 30.0%
! TTTTTGACAAAACACTAGCA+AGG - tig0020632:126771-126790 Msa1383940:intron 30.0%
AGTATTTGCTTCAAAATCAG+GGG - tig0020632:126837-126856 Msa1383940:intron 30.0%
TTACAGAACTGAATTCTCTT+TGG + tig0020632:127034-127053 None:intergenic 30.0%
GAGAATTCAGTTCTGTAATT+AGG - tig0020632:127036-127055 Msa1383940:intron 30.0%
CTGTAATTAGGTTAGTACAT+TGG - tig0020632:127048-127067 Msa1383940:intron 30.0%
! CGAGTTTGGTTAACTAATTT+TGG + tig0020632:127102-127121 None:intergenic 30.0%
AACCAAACTCGTACTAAAAT+AGG - tig0020632:127111-127130 Msa1383940:intron 30.0%
TCTGACAATGTGTTTATAAG+TGG - tig0020632:127165-127184 Msa1383940:intron 30.0%
CTGACAATGTGTTTATAAGT+GGG - tig0020632:127166-127185 Msa1383940:intron 30.0%
TGACAATGTGTTTATAAGTG+GGG - tig0020632:127167-127186 Msa1383940:intron 30.0%
TATTCTTAGAAATGGTGGTT+GGG + tig0020632:127236-127255 None:intergenic 30.0%
! AACCACCATTTCTAAGAATA+GGG - tig0020632:127236-127255 Msa1383940:intron 30.0%
TTCATCCCTATTCTTAGAAA+TGG + tig0020632:127244-127263 None:intergenic 30.0%
! TAATTATGTTGCCATTTCAG+AGG - tig0020632:127445-127464 Msa1383940:CDS 30.0%
!!! TTTTATGGTGTTGTTTGCAT+TGG - tig0020632:127535-127554 Msa1383940:intron 30.0%
TTATATTAGAATGGTACCAG+TGG + tig0020632:127594-127613 None:intergenic 30.0%
GCAGTCATTATAACAACTTA+TGG + tig0020632:127788-127807 None:intergenic 30.0%
CACTGCAAATTTCAATATTG+AGG - tig0020632:127983-128002 Msa1383940:intron 30.0%
AAATTATACGGTATACAAGG+AGG - tig0020632:128314-128333 Msa1383940:intron 30.0%
!!! TTTTTAGGTAGTAAGACTAG+CGG - tig0020632:128598-128617 Msa1383940:intron 30.0%
! AAAAGGAGTAGTGAACTTTT+AGG - tig0020632:128629-128648 Msa1383940:intron 30.0%
ATCAAGGCAACACAAATATT+TGG + tig0020632:128657-128676 None:intergenic 30.0%
AAATTTACATAGACCTCACA+AGG + tig0020632:128727-128746 None:intergenic 30.0%
TAATCAAATTTCAATCCACC+TGG + tig0020632:128850-128869 None:intergenic 30.0%
!! AGGTGGATTGAAATTTGATT+AGG - tig0020632:128849-128868 Msa1383940:intron 30.0%
CACACTGTTATAAAATAGAG+GGG + tig0020632:128975-128994 None:intergenic 30.0%
CACACACTGTTATAAAATAG+AGG + tig0020632:128977-128996 None:intergenic 30.0%
TCATGATAGAACACTAAGAT+AGG - tig0020632:129079-129098 Msa1383940:CDS 30.0%
CATGATAGAACACTAAGATA+GGG - tig0020632:129080-129099 Msa1383940:CDS 30.0%
TGCAATATCTATTGGAATCT+AGG - tig0020632:129145-129164 Msa1383940:CDS 30.0%
AGAGAAGTTATCTATAGTCT+AGG - tig0020632:129294-129313 Msa1383940:intron 30.0%
CTGTTCTTGAGAAAAATGTT+TGG - tig0020632:129573-129592 Msa1383940:intron 30.0%
! AGAAAAATGTTTGGTTTCTC+TGG - tig0020632:129582-129601 Msa1383940:intron 30.0%
! TCTTTCAAAGCACTCTAAAT+TGG - tig0020632:129694-129713 Msa1383940:intron 30.0%
GATATAACAACTACTCAACT+AGG - tig0020632:129756-129775 Msa1383940:intron 30.0%
GTAATCTATCAAGTGTGATA+AGG + tig0020632:129782-129801 None:intergenic 30.0%
GATCGTATGTTAAACATCTT+AGG + tig0020632:129872-129891 None:intergenic 30.0%
TGCAAACATGAATATACTTG+GGG + tig0020632:129964-129983 None:intergenic 30.0%
GTGCAAACATGAATATACTT+GGG + tig0020632:129965-129984 None:intergenic 30.0%
AGTGCAAACATGAATATACT+TGG + tig0020632:129966-129985 None:intergenic 30.0%
AAGTATATTCATGTTTGCAC+TGG - tig0020632:129965-129984 Msa1383940:intron 30.0%
AATTGAAACACCAAAAATGC+CGG + tig0020632:130159-130178 None:intergenic 30.0%
!!! AGGTATTGGTTTTGGATTAA+TGG - tig0020632:130190-130209 Msa1383940:CDS 30.0%
AAATGATGATAGGGAGTTGA+AGG + tig0020632:124594-124613 Msa1383930:intron 35.0%
GGAGATTGTGAAATGATGAT+AGG + tig0020632:124604-124623 Msa1383930:intron 35.0%
ATCTAGTACAGAGAGAATGT+CGG + tig0020632:124719-124738 Msa1383930:intron 35.0%
ATACGAGGTAATTGTTGTAG+TGG + tig0020632:124796-124815 Msa1383930:CDS 35.0%
AATTACCTCGTATCTGTCAA+AGG - tig0020632:124803-124822 Msa1383940:CDS 35.0%
TGATCATTCGGAGATATGAT+AGG + tig0020632:124879-124898 Msa1383930:CDS 35.0%
TCATATCTCCGAATGATCAT+TGG - tig0020632:124880-124899 Msa1383940:CDS 35.0%
CATATCTCCGAATGATCATT+GGG - tig0020632:124881-124900 Msa1383940:CDS 35.0%
ATATCTCCGAATGATCATTG+GGG - tig0020632:124882-124901 Msa1383940:CDS 35.0%
!! CATACCCTTATGCTTTGTTT+GGG + tig0020632:125510-125529 None:intergenic 35.0%
! TCATACCCTTATGCTTTGTT+TGG + tig0020632:125511-125530 None:intergenic 35.0%
TAAATAGTATAGTGGCACAG+TGG + tig0020632:125661-125680 None:intergenic 35.0%
GTTGTTGTGAAATACAAGGT+CGG - tig0020632:125749-125768 Msa1383940:intron 35.0%
! GAAGACTAAAATTGGTAGCA+TGG - tig0020632:125773-125792 Msa1383940:intron 35.0%
TCCAAGACAATAGAATATGC+CGG + tig0020632:125870-125889 None:intergenic 35.0%
TTTGCTCCAAACAATAGCAA+TGG + tig0020632:125915-125934 None:intergenic 35.0%
AATCAAGTAGTTCGTTCAAC+TGG - tig0020632:125939-125958 Msa1383940:intron 35.0%
CTTCTAGTAGCTTTCTTACT+TGG - tig0020632:125966-125985 Msa1383940:intron 35.0%
TTGGACAAATTCAAGTCTCA+TGG + tig0020632:126181-126200 None:intergenic 35.0%
! AAAATAGCAGCAGCTCTAAT+GGG - tig0020632:126302-126321 Msa1383940:intron 35.0%
! CAAGCATGGAGAATTTGTTT+AGG + tig0020632:126352-126371 None:intergenic 35.0%
AAATTCTCCATGCTTGATTG+TGG - tig0020632:126356-126375 Msa1383940:intron 35.0%
TTCTGCACATAATGCATGTT+TGG - tig0020632:126384-126403 Msa1383940:intron 35.0%
AATCAGAAGGACTGTTTGAT+TGG + tig0020632:126449-126468 None:intergenic 35.0%
! TCAGCTGTAGTTTAGAACTA+CGG + tig0020632:126520-126539 None:intergenic 35.0%
GGAAGTTCACGTCATATATT+TGG + tig0020632:126809-126828 None:intergenic 35.0%
GTTGTTTGATCTTCACCTAA+TGG - tig0020632:126980-126999 Msa1383940:intron 35.0%
!!! CACCTATTTTAGTACGAGTT+TGG + tig0020632:127116-127135 None:intergenic 35.0%
GACAATGTGTTTATAAGTGG+GGG - tig0020632:127168-127187 Msa1383940:intron 35.0%
CTATTCTTAGAAATGGTGGT+TGG + tig0020632:127237-127256 None:intergenic 35.0%
! CAACCACCATTTCTAAGAAT+AGG - tig0020632:127235-127254 Msa1383940:intron 35.0%
ATCCCTATTCTTAGAAATGG+TGG + tig0020632:127241-127260 None:intergenic 35.0%
! TTTTCTTGCAACTATATGGG+TGG - tig0020632:127322-127341 Msa1383940:intron 35.0%
AATCGACATGAAAAGGTCAA+AGG + tig0020632:127414-127433 None:intergenic 35.0%
CTACAACAATCGACATGAAA+AGG + tig0020632:127421-127440 None:intergenic 35.0%
!! TTCTGGTTCAAGTACAGAAA+AGG + tig0020632:127631-127650 None:intergenic 35.0%
TGTACTTGAACCAGAATTTG+TGG - tig0020632:127635-127654 Msa1383940:intron 35.0%
!! TGAAAATAATGGGCAACTGT+TGG - tig0020632:127884-127903 Msa1383940:intron 35.0%
TACAAATGTATTTGTAGCCG+TGG + tig0020632:128055-128074 None:intergenic 35.0%
CATATGACGTTCGAAAATCA+GGG - tig0020632:128215-128234 Msa1383940:intron 35.0%
ATATGACGTTCGAAAATCAG+GGG - tig0020632:128216-128235 Msa1383940:intron 35.0%
!! TTTTAGGTAGTAAGACTAGC+GGG - tig0020632:128599-128618 Msa1383940:intron 35.0%
ATTTGTGTTGCCTTGATTGA+AGG - tig0020632:128660-128679 Msa1383940:CDS 35.0%
! GTGTGTTGAAAAGAGTATGA+TGG - tig0020632:128759-128778 Msa1383940:intron 35.0%
! TGTTGAAAAGAGTATGATGG+TGG - tig0020632:128762-128781 Msa1383940:intron 35.0%
! GTTGAAAAGAGTATGATGGT+GGG - tig0020632:128763-128782 Msa1383940:intron 35.0%
! TGTTGCTGCCATTTATGTTA+AGG - tig0020632:128788-128807 Msa1383940:intron 35.0%
! GGTTTTCACTAAATTGGACT+TGG - tig0020632:128809-128828 Msa1383940:intron 35.0%
ACAGAAAGTGAGATACAATC+TGG - tig0020632:128923-128942 Msa1383940:intron 35.0%
CTTGATATTGCAGCAATCAA+GGG + tig0020632:129045-129064 None:intergenic 35.0%
TCTTGATATTGCAGCAATCA+AGG + tig0020632:129046-129065 None:intergenic 35.0%
AATTGTGGTTTGATAGAACC+CGG - tig0020632:129449-129468 Msa1383940:intron 35.0%
ATGTGACAAGGAAGAAAAGT+TGG + tig0020632:129632-129651 None:intergenic 35.0%
TCAAGCAATATGATGTGACA+AGG + tig0020632:129644-129663 None:intergenic 35.0%
ATCCATCTTCTTATCGTTCT+TGG - tig0020632:129999-130018 Msa1383940:intron 35.0%
ATCCAAGAACGATAAGAAGA+TGG + tig0020632:130004-130023 None:intergenic 35.0%
CTTCTTATCGTTCTTGGATT+AGG - tig0020632:130005-130024 Msa1383940:intron 35.0%
TTAGCATCAAACGCGAATAT+TGG - tig0020632:130062-130081 Msa1383940:CDS 35.0%
AATCATGCAATTGATGAGGT+AGG + tig0020632:130364-130383 None:intergenic 35.0%
TCGTAATCATGCAATTGATG+AGG + tig0020632:130368-130387 None:intergenic 35.0%
ACATGAATTGAGGATGTTGG+AGG + tig0020632:124745-124764 Msa1383930:intron 40.0%
ATTGTTGTAGTGGTGTGTTG+AGG + tig0020632:124786-124805 Msa1383930:CDS 40.0%
! ACAACACTTCGAGTTAAACG+AGG + tig0020632:124831-124850 Msa1383930:CDS 40.0%
CAAACACCCCAATGATCATT+CGG + tig0020632:124891-124910 Msa1383930:CDS 40.0%
!!! ATCTTCAGCATTGGTGCTTT+TGG - tig0020632:124918-124937 Msa1383940:CDS 40.0%
!!! TCTTCAGCATTGGTGCTTTT+GGG - tig0020632:124919-124938 Msa1383940:CDS 40.0%
AGAGGTTGAAGTAGCTGAAA+TGG + tig0020632:125350-125369 None:intergenic 40.0%
AGGTCGGAGAAGACTAAAAT+TGG - tig0020632:125765-125784 Msa1383940:intron 40.0%
GCTTTAGTGAGCACATTAGT+CGG - tig0020632:125804-125823 Msa1383940:intron 40.0%
AATTCTTCCACATGATGCAC+CGG - tig0020632:125848-125867 Msa1383940:intron 40.0%
ACCGGCATATTCTATTGTCT+TGG - tig0020632:125866-125885 Msa1383940:intron 40.0%
ACACAGCTTCAATCTGAACT+CGG + tig0020632:126035-126054 None:intergenic 40.0%
CTGAAACACGAACACATACA+CGG + tig0020632:126144-126163 None:intergenic 40.0%
ATAGTGCCTATGAGATCTCT+TGG - tig0020632:126266-126285 Msa1383940:intron 40.0%
!!! TGCTGCTATTTTCCAGTTGT+CGG + tig0020632:126294-126313 None:intergenic 40.0%
! GAAAATAGCAGCAGCTCTAA+TGG - tig0020632:126301-126320 Msa1383940:intron 40.0%
GCTCTAATGGGAAGCTATAT+TGG - tig0020632:126314-126333 Msa1383940:intron 40.0%
CTAATGGGAAGCTATATTGG+TGG - tig0020632:126317-126336 Msa1383940:intron 40.0%
AAGCAAACCACAATCAAGCA+TGG + tig0020632:126366-126385 None:intergenic 40.0%
!! GTAGTTCTAAACTACAGCTG+AGG - tig0020632:126519-126538 Msa1383940:intron 40.0%
GTGGCAAAATTCAGCAAATG+AGG - tig0020632:126581-126600 Msa1383940:CDS 40.0%
GAGAAACCCCTATAAGTATC+TGG + tig0020632:126720-126739 None:intergenic 40.0%
TTAAGAGTCCCACATTGGAT+AGG - tig0020632:127136-127155 Msa1383940:intron 40.0%
ATTAGAATGGTACCAGTGGT+TGG + tig0020632:127590-127609 None:intergenic 40.0%
!!! ATTTTAATTTGGGCGGGTGA+AGG - tig0020632:127760-127779 Msa1383940:intron 40.0%
CTGGAAACAATCAACACATG+TGG + tig0020632:127819-127838 None:intergenic 40.0%
GCATATGACGTTCGAAAATC+AGG - tig0020632:128214-128233 Msa1383940:intron 40.0%
ACAATGATTGCAGTTACTCC+TGG + tig0020632:128347-128366 None:intergenic 40.0%
!! ATAAGCGGACTAATCAGCTT+CGG + tig0020632:128389-128408 None:intergenic 40.0%
ATTTGCCAAAGACACACATG+GGG + tig0020632:128545-128564 None:intergenic 40.0%
CATTTGCCAAAGACACACAT+GGG + tig0020632:128546-128565 None:intergenic 40.0%
ACATTTGCCAAAGACACACA+TGG + tig0020632:128547-128566 None:intergenic 40.0%
GACTAGCGGGAAAAAAGAAA+AGG - tig0020632:128612-128631 Msa1383940:intron 40.0%
AGCACTCAAACCTTCAATCA+AGG + tig0020632:128673-128692 None:intergenic 40.0%
GCTAGCAACACATCCTTTAA+CGG - tig0020632:128690-128709 Msa1383940:CDS 40.0%
TGGTTTATGTAAACGCTTCC+AGG - tig0020632:128829-128848 Msa1383940:intron 40.0%
TTTATGTAAACGCTTCCAGG+TGG - tig0020632:128832-128851 Msa1383940:intron 40.0%
TTAAAGAGAGAGAAGCCTAG+AGG - tig0020632:129182-129201 Msa1383940:CDS 40.0%
TAAAGAGAGAGAAGCCTAGA+GGG - tig0020632:129183-129202 Msa1383940:CDS 40.0%
TTCTTAATGACGAACCCTCT+AGG + tig0020632:129200-129219 None:intergenic 40.0%
TAAAAGAGAGGGAAGTCTAG+AGG - tig0020632:129234-129253 Msa1383940:intron 40.0%
AAAAGAGAGGGAAGTCTAGA+GGG - tig0020632:129235-129254 Msa1383940:intron 40.0%
TGAGCTTAAGAGCTCTACAA+TGG + tig0020632:129381-129400 None:intergenic 40.0%
ATACGATCTATTTCGTTCGC+AGG - tig0020632:129884-129903 Msa1383940:intron 40.0%
!!! TCGTTCGCAGGTATTTTTTG+TGG - tig0020632:129896-129915 Msa1383940:intron 40.0%
!!! TTCGCAGGTATTTTTTGTGG+TGG - tig0020632:129899-129918 Msa1383940:intron 40.0%
!!! CAGGTATTTTTTGTGGTGGT+TGG - tig0020632:129903-129922 Msa1383940:intron 40.0%
TGAATATACTTGGGGCAGTT+TGG + tig0020632:129956-129975 None:intergenic 40.0%
TGGGAATCTTTAGTTGTTCC+TGG - tig0020632:130125-130144 Msa1383940:CDS 40.0%
GTTGTTCCTGGAATTCTTAC+CGG - tig0020632:130137-130156 Msa1383940:CDS 40.0%
AAAATGCCGGTAAGAATTCC+AGG + tig0020632:130146-130165 None:intergenic 40.0%
! GGAATTCTTACCGGCATTTT+TGG - tig0020632:130146-130165 Msa1383940:CDS 40.0%
GAGAATGTCGGAATGATACG+TGG + tig0020632:124707-124726 Msa1383930:intron 45.0%
CGGACATGAATTGAGGATGT+TGG + tig0020632:124748-124767 Msa1383930:intron 45.0%
TGAGGTTGTAGTACGAGGTT+CGG + tig0020632:124768-124787 Msa1383930:CDS 45.0%
TGTGTTGAGGTTGTAGTACG+AGG + tig0020632:124773-124792 Msa1383930:CDS 45.0%
AGGTTCCTTTGACAGATACG+AGG + tig0020632:124811-124830 Msa1383930:CDS 45.0%
! CGAATGATCATTGGGGTGTT+TGG - tig0020632:124889-124908 Msa1383940:CDS 45.0%
TGGTCTGCTATCTTCAGCAT+TGG - tig0020632:124909-124928 Msa1383940:CDS 45.0%
!!! GCATTGGTGCTTTTGGGATT+TGG - tig0020632:124925-124944 Msa1383940:CDS 45.0%
TGACATACAATCGACAGCTC+TGG + tig0020632:125104-125123 None:intergenic 45.0%
AAAGCTAGCTCAAGAGAGGA+GGG + tig0020632:125149-125168 None:intergenic 45.0%
AAAAGCTAGCTCAAGAGAGG+AGG + tig0020632:125150-125169 None:intergenic 45.0%
!!! TCCTCTCTTGAGCTAGCTTT+TGG - tig0020632:125149-125168 Msa1383940:intron 45.0%
!!! CCTCTCTTGAGCTAGCTTTT+GGG - tig0020632:125150-125169 Msa1383940:intron 45.0%
!!! TTAGTTTTAAACTGCGGCCG+CGG - tig0020632:125536-125555 Msa1383940:intron 45.0%
AAGGACAACAACTGAATCCG+CGG + tig0020632:125556-125575 None:intergenic 45.0%
GTAGCTTTCTTACTTGGGTC+AGG - tig0020632:125972-125991 Msa1383940:intron 45.0%
GTTCAGATTGAAGCTGTGTC+TGG - tig0020632:126036-126055 Msa1383940:intron 45.0%
!!! GCTGCTATTTTCCAGTTGTC+GGG + tig0020632:126293-126312 None:intergenic 45.0%
CGTTGTGCAACTGCAGTATA+AGG + tig0020632:126647-126666 None:intergenic 45.0%
GATCTCTGCTGTTAGCCATT+AGG + tig0020632:126998-127017 None:intergenic 45.0%
AGGTGTTAAGAGTCCCACAT+TGG - tig0020632:127131-127150 Msa1383940:intron 45.0%
GACCATCTCCTATCCAATGT+GGG + tig0020632:127147-127166 None:intergenic 45.0%
AGACCATCTCCTATCCAATG+TGG + tig0020632:127148-127167 None:intergenic 45.0%
!!! ACCTCGCAAACTGGTTTTGT+GGG - tig0020632:127199-127218 Msa1383940:intron 45.0%
TTGCAACTATATGGGTGGCT+AGG - tig0020632:127327-127346 Msa1383940:intron 45.0%
AACTATATGGGTGGCTAGGT+AGG - tig0020632:127331-127350 Msa1383940:intron 45.0%
ACTATATGGGTGGCTAGGTA+GGG - tig0020632:127332-127351 Msa1383940:intron 45.0%
!!! TCAGCATCAGTTTTAGCTGC+AGG - tig0020632:127479-127498 Msa1383940:CDS 45.0%
!!! ATCAGTTTTAGCTGCAGGAG+TGG - tig0020632:127484-127503 Msa1383940:CDS 45.0%
!! ATACAAGGAGGTACTCTTCC+AGG - tig0020632:128326-128345 Msa1383940:intron 45.0%
ATTAGTCCGCTTATACCTGC+TGG - tig0020632:128395-128414 Msa1383940:intron 45.0%
GTATGACCAGCAGGTATAAG+CGG + tig0020632:128404-128423 None:intergenic 45.0%
TGTTACCTGCATCAAGACCA+AGG + tig0020632:128432-128451 None:intergenic 45.0%
ATCATCCCCATGTGTGTCTT+TGG - tig0020632:128537-128556 Msa1383940:intron 45.0%
GGTTCACACAAGTCCGTTAA+AGG + tig0020632:128706-128725 None:intergenic 45.0%
! GAGGGGTGTATAATCAAGAG+AGG + tig0020632:128958-128977 None:intergenic 45.0%
ATAGTCTAGGAGCTTAGCTC+TGG - tig0020632:129307-129326 Msa1383940:intron 45.0%
GCTTAAGAGCTCTACAATGG+TGG + tig0020632:129378-129397 None:intergenic 45.0%
GCATCAAACGCGAATATTGG+CGG - tig0020632:130065-130084 Msa1383940:CDS 45.0%
CCATTCCACAAGCTGTTGTA+GGG + tig0020632:130091-130110 None:intergenic 45.0%
AACAGCTTGTGGAATGGCTA+AGG - tig0020632:130094-130113 Msa1383940:CDS 45.0%
TGTGGAATGGCTAAGGCTAA+AGG - tig0020632:130101-130120 Msa1383940:CDS 45.0%
AATGGCTAAGGCTAAAGGCT+GGG - tig0020632:130106-130125 Msa1383940:CDS 45.0%
GCAATTGATGAGGTAGGAGA+TGG + tig0020632:130358-130377 None:intergenic 45.0%
! CATTGGTGTCTCTGTGTGTG+TGG + tig0020632:124625-124644 Msa1383930:intron 50.0%
GGGTGTTTGAGGAGAGACAT+TGG + tig0020632:124642-124661 Msa1383930:intron 50.0%
GAGAGAGAACAGTGACAGGT+GGG + tig0020632:124662-124681 Msa1383930:intron 50.0%
GGAATGATACGTGGCGTGAT+GGG + tig0020632:124698-124717 Msa1383930:intron 50.0%
CGAGGTTCGGACATGAATTG+AGG + tig0020632:124755-124774 Msa1383930:intron 50.0%
TTGTATGTCCCACATCGCTC+AGG - tig0020632:125076-125095 Msa1383940:intron 50.0%
CCCAAAAGCTAGCTCAAGAG+AGG + tig0020632:125153-125172 None:intergenic 50.0%
GCACAATGACTGCAATCGCA+AGG + tig0020632:125575-125594 None:intergenic 50.0%
GAGCACATTAGTCGGACTTG+CGG - tig0020632:125812-125831 Msa1383940:intron 50.0%
GGACTTGCGGCAAGTAATCT+TGG - tig0020632:125825-125844 Msa1383940:intron 50.0%
GAATATGCCGGTGCATCATG+TGG + tig0020632:125858-125877 None:intergenic 50.0%
TCGGGACCAAGAGATCTCAT+AGG + tig0020632:126275-126294 None:intergenic 50.0%
! GTCGAGAAAGCATGCACTCA+TGG - tig0020632:126876-126895 Msa1383940:intron 50.0%
AGCAGAGATCCACGACTGAT+TGG - tig0020632:127008-127027 Msa1383940:intron 50.0%
TCTCTTTGGCCAATCAGTCG+TGG + tig0020632:127020-127039 None:intergenic 50.0%
GTCCCACATTGGATAGGAGA+TGG - tig0020632:127142-127161 Msa1383940:intron 50.0%
CAAAACCAGTTTGCGAGGTG+AGG + tig0020632:127198-127217 None:intergenic 50.0%
!!! CACCTCGCAAACTGGTTTTG+TGG - tig0020632:127198-127217 Msa1383940:intron 50.0%
!!! CCTCGCAAACTGGTTTTGTG+GGG - tig0020632:127200-127219 Msa1383940:intron 50.0%
!! TGGGGCATCGAGTATTCAAG+TGG + tig0020632:127278-127297 None:intergenic 50.0%
! CAAACCAAGCGCCTCTGAAA+TGG + tig0020632:127459-127478 None:intergenic 50.0%
! AATGGTACCAGTGGTTGGTG+GGG + tig0020632:127585-127604 None:intergenic 50.0%
GAATGGTACCAGTGGTTGGT+GGG + tig0020632:127586-127605 None:intergenic 50.0%
AGAATGGTACCAGTGGTTGG+TGG + tig0020632:127587-127606 None:intergenic 50.0%
! AATCAGCTTCGGTGCAAGAG+TGG + tig0020632:128378-128397 None:intergenic 50.0%
AAGGCAACAGTATGACCAGC+AGG + tig0020632:128413-128432 None:intergenic 50.0%
TGCTGGTCATACTGTTGCCT+TGG - tig0020632:128412-128431 Msa1383940:intron 50.0%
!! TGTTGCCTTGGTCTTGATGC+AGG - tig0020632:128424-128443 Msa1383940:intron 50.0%
GGACTTGTGTGAACCTTGTG+AGG - tig0020632:128711-128730 Msa1383940:CDS 50.0%
!! TCTAGGAGCTTAGCTCTGGT+AGG - tig0020632:129311-129330 Msa1383940:intron 50.0%
TTTGTGGTGGTTGGAGCTAG+TGG - tig0020632:129912-129931 Msa1383940:intron 50.0%
CCCTACAACAGCTTGTGGAA+TGG - tig0020632:130088-130107 Msa1383940:CDS 50.0%
GCCATTCCACAAGCTGTTGT+AGG + tig0020632:130092-130111 None:intergenic 50.0%
GAATGGCTAAGGCTAAAGGC+TGG - tig0020632:130105-130124 Msa1383940:CDS 50.0%
CAGTGACAGGTGGGTGTTTG+AGG + tig0020632:124653-124672 Msa1383930:intron 55.0%
GGAGAGAGAACAGTGACAGG+TGG + tig0020632:124663-124682 Msa1383930:intron 55.0%
GGTGGAGAGAGAACAGTGAC+AGG + tig0020632:124666-124685 Msa1383930:intron 55.0%
!! CGTGATGGGATTGGTTGTGG+TGG + tig0020632:124684-124703 Msa1383930:intron 55.0%
!! TGGCGTGATGGGATTGGTTG+TGG + tig0020632:124687-124706 Msa1383930:intron 55.0%
! GATACGTGGCGTGATGGGAT+TGG + tig0020632:124693-124712 Msa1383930:intron 55.0%
CGGAATGATACGTGGCGTGA+TGG + tig0020632:124699-124718 Msa1383930:intron 55.0%
!! CTCTGGAACCTGAGCGATGT+GGG + tig0020632:125087-125106 None:intergenic 55.0%
GATCTCTTGGTCCCGACAAC+TGG - tig0020632:126279-126298 Msa1383940:intron 55.0%
TACAGCTGAGGTTGCAGCAG+CGG - tig0020632:126531-126550 Msa1383940:intron 55.0%
GCAATCCTCACCTCGCAAAC+TGG - tig0020632:127190-127209 Msa1383940:intron 55.0%
CCCCACAAAACCAGTTTGCG+AGG + tig0020632:127203-127222 None:intergenic 55.0%
GGTGGCTAGGTAGGGTTTCT+TGG - tig0020632:127340-127359 Msa1383940:intron 55.0%
!! GTTGCCATTTCAGAGGCGCT+TGG - tig0020632:127452-127471 Msa1383940:CDS 55.0%
GCAGTAGCTGTCTGCAACAC+TGG + tig0020632:128248-128267 None:intergenic 55.0%
!! GCTCTGGAACCTGAGCGATG+TGG + tig0020632:125088-125107 None:intergenic 60.0%
! GTTGGTGGGGCAGTCTCTGC+AGG + tig0020632:127572-127591 None:intergenic 65.0%
GAGACTGCCCCACCAACCAC+TGG - tig0020632:127575-127594 Msa1383940:intron 65.0%
GGCGGCCCTACAACAGCTTG+TGG - tig0020632:130083-130102 Msa1383940:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0020632 gene 124555 130424 124555 ID=Msa1383940;Name=Msa1383940
tig0020632 mRNA 124555 130424 124555 ID=Msa1383940-mRNA-1;Parent=Msa1383940;Name=Msa1383940-mRNA-1;_AED=0.18;_eAED=0.18;_QI=18|1|1|1|1|1|6|195|477
tig0020632 exon 124555 125073 124555 ID=Msa1383940-mRNA-1:exon:8837;Parent=Msa1383940-mRNA-1
tig0020632 exon 126534 126775 126534 ID=Msa1383940-mRNA-1:exon:8836;Parent=Msa1383940-mRNA-1
tig0020632 exon 127383 127538 127383 ID=Msa1383940-mRNA-1:exon:8835;Parent=Msa1383940-mRNA-1
tig0020632 exon 128638 128748 128638 ID=Msa1383940-mRNA-1:exon:8834;Parent=Msa1383940-mRNA-1
tig0020632 exon 128986 129212 128986 ID=Msa1383940-mRNA-1:exon:8833;Parent=Msa1383940-mRNA-1
tig0020632 exon 130033 130424 130033 ID=Msa1383940-mRNA-1:exon:8832;Parent=Msa1383940-mRNA-1
tig0020632 five_prime_UTR 130407 130424 130407 ID=Msa1383940-mRNA-1:five_prime_utr;Parent=Msa1383940-mRNA-1
tig0020632 CDS 130033 130406 130033 ID=Msa1383940-mRNA-1:cds;Parent=Msa1383940-mRNA-1
tig0020632 CDS 128986 129212 128986 ID=Msa1383940-mRNA-1:cds;Parent=Msa1383940-mRNA-1
tig0020632 CDS 128638 128748 128638 ID=Msa1383940-mRNA-1:cds;Parent=Msa1383940-mRNA-1
tig0020632 CDS 127383 127538 127383 ID=Msa1383940-mRNA-1:cds;Parent=Msa1383940-mRNA-1
tig0020632 CDS 126534 126775 126534 ID=Msa1383940-mRNA-1:cds;Parent=Msa1383940-mRNA-1
tig0020632 CDS 124750 125073 124750 ID=Msa1383940-mRNA-1:cds;Parent=Msa1383940-mRNA-1
tig0020632 three_prime_UTR 124555 124749 124555 ID=Msa1383940-mRNA-1:three_prime_utr;Parent=Msa1383940-mRNA-1
Gene Sequence

>Msa1383940

ATGATCAGAATCAGATGTCCTTCAACTCCCTATCATCATTTCACAATCTCCACACACACAGAGACACCAATGTCTCTCCTCAAACACCCACCTGTCACTGTTCTCTCTCCACCACAACCAATCCCATCACGCCACGTATCATTCCGACATTCTCTCTGTACTAGATTCTCCTCCAACATCCTCAATTCATGTCCGAACCTCGTACTACAACCTCAACACACCACTACAACAATTACCTCGTATCTGTCAAAGGAACCTCGTTTAACTCGAAGTGTTGTTGCAGTGAAGTCACAGCTGAGATATCCTATCATATCTCCGAATGATCATTGGGGTGTTTGGTCTGCTATCTTCAGCATTGGTGCTTTTGGGATTTGGTCGGAGAAGACTAAAATTGGTAGCATGGTGAGTGCTGCTTTAGTGAGCACATTAGTCGGACTTGCGGCAAGTAATCTTGGAATTCTTCCACATGATGCACCGGCATATTCTATTGTCTTGGAGTTTCTGTTACCTCTTACTATTCCATTGCTATTGTTTGGAGCAAATTTGAATCAAGTAGTTCGTTCAACTGGAACACTTCTAGTAGCTTTCTTACTTGGGTCAGTTGCTACTATAATTGGCACGCTAGTCGCATTTCTGATAGTGCCTATGAGATCTCTTGGTCCCGACAACTGGAAAATAGCAGCAGCTCTAATGGGAAGCTATATTGGTGGATCTGTTAATTATGTTGCCATTTCAGAGGCGCTTGGTTTGTCAGCATCAGTTTTAGCTGCAGGAGTGGCAGCAGATAATGTTATCACTGCTCTTTATTTTATGGTGTTGTTTGCATTGGCTTCTAAAATACCTGCAGAGACTGCCCCACCAACCACTGATAAAGAAATGCATATGACGTTCGAAAATCAGGGGAACATGCCAGTGTTGCAGACAGCTACTGCAGTCGCTACATCATTTTTAATATGTAGAGCTGCTACATACTTAACAAAATTATACGGTATACAAGGAGGTACTCTTCCAGGAGTAACTGCAATCATTGTCGTTTTAGCCACTCTTGCACCGAAGCTGATTAGTCCGCTTATACCTGCTGGTCATACTGTTGCCTTGGTCTTGATGCAGGTATTTTTTGTGGTGGTTGGAGCTAGTGGAAGTATATTGAATGTTATCCAAACTGCCCCAAGTATATTCATGTTTGCACTGGTTCAAGTAACTATCCATCTTCTTATCGTTCTTGGATTAGGAAAGTTATTTAAGCTTGATTTGAAGCTATTACTTTTAGCATCAAACGCGAATATTGGCGGCCCTACAACAGCTTGTGGAATGGCTAAGGCTAAAGGCTGGGAATCTTTAGTTGTTCCTGGAATTCTTACCGGCATTTTTGGTGTTTCAATTGCAACATTTTTAGGTATTGGTTTTGGATTAATGGTTCTAAAACACTTGTAG

Protein sequence

>Msa1383940

MIRIRCPSTPYHHFTISTHTETPMSLLKHPPVTVLSPPQPIPSRHVSFRHSLCTRFSSNILNSCPNLVLQPQHTTTTITSYLSKEPRLTRSVVAVKSQLRYPIISPNDHWGVWSAIFSIGAFGIWSEKTKIGSMVSAALVSTLVGLAASNLGILPHDAPAYSIVLEFLLPLTIPLLLFGANLNQVVRSTGTLLVAFLLGSVATIIGTLVAFLIVPMRSLGPDNWKIAAALMGSYIGGSVNYVAISEALGLSASVLAAGVAADNVITALYFMVLFALASKIPAETAPPTTDKEMHMTFENQGNMPVLQTATAVATSFLICRAATYLTKLYGIQGGTLPGVTAIIVVLATLAPKLISPLIPAGHTVALVLMQVFFVVVGASGSILNVIQTAPSIFMFALVQVTIHLLIVLGLGKLFKLDLKLLLLASNANIGGPTTACGMAKAKGWESLVVPGILTGIFGVSIATFLGIGFGLMVLKHL*