Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0541700 | XP_003630432.2 | 98.438 | 192 | 3 | 0 | 1 | 192 | 1 | 192 | 5.08e-134 | 383 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0541700 | sp|Q9FNP0|VQ31_ARATH | 56.983 | 179 | 55 | 6 | 16 | 191 | 13 | 172 | 6.63e-45 | 149 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0541700 | G7LGI0 | 98.438 | 192 | 3 | 0 | 1 | 192 | 1 | 192 | 2.43e-134 | 383 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001040 | Msa0541700 | 0.809805 | 1.577633e-50 | -8.615850e-47 |
| Msa0001510 | Msa0541700 | 0.801380 | 9.253753e-49 | -8.615850e-47 |
| Msa0002110 | Msa0541700 | 0.801137 | 1.037415e-48 | -8.615850e-47 |
| Msa0007570 | Msa0541700 | 0.818356 | 2.045800e-52 | -8.615850e-47 |
| Msa0021240 | Msa0541700 | 0.814571 | 1.439603e-51 | -8.615850e-47 |
| Msa0025060 | Msa0541700 | 0.811675 | 6.217108e-51 | -8.615850e-47 |
| Msa0028450 | Msa0541700 | 0.809379 | 1.947972e-50 | -8.615850e-47 |
| Msa0028940 | Msa0541700 | 0.811694 | 6.159837e-51 | -8.615850e-47 |
| Msa0029280 | Msa0541700 | 0.831435 | 1.671745e-55 | -8.615850e-47 |
| Msa0030710 | Msa0541700 | 0.803787 | 2.950890e-49 | -8.615850e-47 |
| Msa0030760 | Msa0541700 | 0.812105 | 5.011742e-51 | -8.615850e-47 |
| Msa0032890 | Msa0541700 | 0.816345 | 5.802216e-52 | -8.615850e-47 |
| Msa0033190 | Msa0541700 | 0.822645 | 2.119809e-53 | -8.615850e-47 |
| Msa0039780 | Msa0541700 | 0.803758 | 2.992243e-49 | -8.615850e-47 |
| Msa0042500 | Msa0541700 | 0.828939 | 6.802542e-55 | -8.615850e-47 |
| Msa0046090 | Msa0541700 | 0.803372 | 3.597564e-49 | -8.615850e-47 |
| Msa0050850 | Msa0541700 | 0.818525 | 1.873316e-52 | -8.615850e-47 |
| Msa0065670 | Msa0541700 | 0.806873 | 6.657214e-50 | -8.615850e-47 |
| Msa0070580 | Msa0541700 | 0.806007 | 1.013785e-49 | -8.615850e-47 |
| Msa0075990 | Msa0541700 | 0.802166 | 6.381448e-49 | -8.615850e-47 |
| Msa0076990 | Msa0541700 | 0.808859 | 2.517254e-50 | -8.615850e-47 |
| Msa0078160 | Msa0541700 | 0.805487 | 1.303564e-49 | -8.615850e-47 |
| Msa0078170 | Msa0541700 | 0.808512 | 2.985838e-50 | -8.615850e-47 |
| Msa0079320 | Msa0541700 | 0.820606 | 6.277628e-53 | -8.615850e-47 |
| Msa0079570 | Msa0541700 | 0.826584 | 2.503231e-54 | -8.615850e-47 |
| Msa0079840 | Msa0541700 | 0.819000 | 1.461557e-52 | -8.615850e-47 |
| Msa0080060 | Msa0541700 | 0.816020 | 6.856130e-52 | -8.615850e-47 |
| Msa0087370 | Msa0541700 | 0.804917 | 1.715719e-49 | -8.615850e-47 |
| Msa0093830 | Msa0541700 | 0.805736 | 1.155925e-49 | -8.615850e-47 |
| Msa0094900 | Msa0541700 | 0.815028 | 1.140082e-51 | -8.615850e-47 |
| Msa0113910 | Msa0541700 | 0.815573 | 8.624804e-52 | -8.615850e-47 |
| Msa0114960 | Msa0541700 | 0.817507 | 3.181655e-52 | -8.615850e-47 |
| Msa0127060 | Msa0541700 | 0.800350 | 1.501978e-48 | -8.615850e-47 |
| Msa0127110 | Msa0541700 | 0.803118 | 4.059772e-49 | -8.615850e-47 |
| Msa0127220 | Msa0541700 | 0.819122 | 1.370768e-52 | -8.615850e-47 |
| Msa0127240 | Msa0541700 | 0.811486 | 6.834779e-51 | -8.615850e-47 |
| Msa0132920 | Msa0541700 | 0.800942 | 1.137554e-48 | -8.615850e-47 |
| Msa0138340 | Msa0541700 | 0.819358 | 1.211032e-52 | -8.615850e-47 |
| Msa0140870 | Msa0541700 | 0.811163 | 8.033514e-51 | -8.615850e-47 |
| Msa0141090 | Msa0541700 | 0.828827 | 7.239875e-55 | -8.615850e-47 |
| Msa0146570 | Msa0541700 | 0.804249 | 2.365430e-49 | -8.615850e-47 |
| Msa0147960 | Msa0541700 | 0.818804 | 1.619227e-52 | -8.615850e-47 |
| Msa0160080 | Msa0541700 | 0.809454 | 1.877545e-50 | -8.615850e-47 |
| Msa0164580 | Msa0541700 | 0.832766 | 7.838949e-56 | -8.615850e-47 |
| Msa0165820 | Msa0541700 | 0.808933 | 2.428029e-50 | -8.615850e-47 |
| Msa0169320 | Msa0541700 | 0.807239 | 5.570619e-50 | -8.615850e-47 |
| Msa0170640 | Msa0541700 | 0.807087 | 5.997408e-50 | -8.615850e-47 |
| Msa0170690 | Msa0541700 | 0.802472 | 5.520954e-49 | -8.615850e-47 |
| Msa0170730 | Msa0541700 | 0.826561 | 2.536303e-54 | -8.615850e-47 |
| Msa0172110 | Msa0541700 | 0.820223 | 7.681475e-53 | -8.615850e-47 |
| Msa0172290 | Msa0541700 | 0.805161 | 1.525468e-49 | -8.615850e-47 |
| Msa0173580 | Msa0541700 | 0.820350 | 7.184149e-53 | -8.615850e-47 |
| Msa0175240 | Msa0541700 | 0.802747 | 4.845240e-49 | -8.615850e-47 |
| Msa0186380 | Msa0541700 | 0.823835 | 1.118093e-53 | -8.615850e-47 |
| Msa0194750 | Msa0541700 | 0.831967 | 1.236539e-55 | -8.615850e-47 |
| Msa0196620 | Msa0541700 | 0.807149 | 5.819671e-50 | -8.615850e-47 |
| Msa0208040 | Msa0541700 | 0.816417 | 5.590112e-52 | -8.615850e-47 |
| Msa0208710 | Msa0541700 | 0.808244 | 3.406120e-50 | -8.615850e-47 |
| Msa0209370 | Msa0541700 | 0.823217 | 1.559791e-53 | -8.615850e-47 |
| Msa0209590 | Msa0541700 | 0.815405 | 9.403268e-52 | -8.615850e-47 |
| Msa0219720 | Msa0541700 | 0.805170 | 1.519148e-49 | -8.615850e-47 |
| Msa0225050 | Msa0541700 | 0.853462 | 2.352079e-61 | -8.615850e-47 |
| Msa0225080 | Msa0541700 | 0.820510 | 6.604441e-53 | -8.615850e-47 |
| Msa0225790 | Msa0541700 | 0.819219 | 1.303016e-52 | -8.615850e-47 |
| Msa0227970 | Msa0541700 | 0.814825 | 1.264738e-51 | -8.615850e-47 |
| Msa0228360 | Msa0541700 | 0.806665 | 7.365342e-50 | -8.615850e-47 |
| Msa0236690 | Msa0541700 | 0.822272 | 2.588325e-53 | -8.615850e-47 |
| Msa0237440 | Msa0541700 | 0.807768 | 4.301338e-50 | -8.615850e-47 |
| Msa0238530 | Msa0541700 | 0.805767 | 1.138834e-49 | -8.615850e-47 |
| Msa0365350 | Msa0541700 | 0.829282 | 5.615468e-55 | -8.615850e-47 |
| Msa0369080 | Msa0541700 | 0.815899 | 7.296506e-52 | -8.615850e-47 |
| Msa0370350 | Msa0541700 | 0.804029 | 2.627662e-49 | -8.615850e-47 |
| Msa0374840 | Msa0541700 | 0.827601 | 1.429524e-54 | -8.615850e-47 |
| Msa0375100 | Msa0541700 | 0.823155 | 1.613234e-53 | -8.615850e-47 |
| Msa0375320 | Msa0541700 | 0.800395 | 1.470729e-48 | -8.615850e-47 |
| Msa0375570 | Msa0541700 | 0.801906 | 7.216632e-49 | -8.615850e-47 |
| Msa0378440 | Msa0541700 | 0.806157 | 9.427240e-50 | -8.615850e-47 |
| Msa0378530 | Msa0541700 | 0.826932 | 2.067333e-54 | -8.615850e-47 |
| Msa0384150 | Msa0541700 | 0.829955 | 3.853366e-55 | -8.615850e-47 |
| Msa0385870 | Msa0541700 | 0.825321 | 4.995152e-54 | -8.615850e-47 |
| Msa0390350 | Msa0541700 | 0.811021 | 8.622431e-51 | -8.615850e-47 |
| Msa0404360 | Msa0541700 | 0.809091 | 2.245523e-50 | -8.615850e-47 |
| Msa0404880 | Msa0541700 | 0.802717 | 4.914252e-49 | -8.615850e-47 |
| Msa0413050 | Msa0541700 | 0.833637 | 4.757172e-56 | -8.615850e-47 |
| Msa0416430 | Msa0541700 | 0.817961 | 2.513606e-52 | -8.615850e-47 |
| Msa0420280 | Msa0541700 | 0.809135 | 2.197722e-50 | -8.615850e-47 |
| Msa0427890 | Msa0541700 | 0.809129 | 2.203944e-50 | -8.615850e-47 |
| Msa0431310 | Msa0541700 | 0.811320 | 7.426989e-51 | -8.615850e-47 |
| Msa0431560 | Msa0541700 | 0.800981 | 1.116791e-48 | -8.615850e-47 |
| Msa0434820 | Msa0541700 | 0.823290 | 1.500299e-53 | -8.615850e-47 |
| Msa0436660 | Msa0541700 | 0.803865 | 2.842913e-49 | -8.615850e-47 |
| Msa0449030 | Msa0541700 | 0.804456 | 2.142067e-49 | -8.615850e-47 |
| Msa0450890 | Msa0541700 | 0.818725 | 1.687405e-52 | -8.615850e-47 |
| Msa0458130 | Msa0541700 | 0.820289 | 7.422278e-53 | -8.615850e-47 |
| Msa0461150 | Msa0541700 | 0.804914 | 1.718329e-49 | -8.615850e-47 |
| Msa0463030 | Msa0541700 | 0.806361 | 8.539117e-50 | -8.615850e-47 |
| Msa0469770 | Msa0541700 | 0.815967 | 7.046067e-52 | -8.615850e-47 |
| Msa0469840 | Msa0541700 | 0.814292 | 1.659094e-51 | -8.615850e-47 |
| Msa0470330 | Msa0541700 | 0.808684 | 2.744484e-50 | -8.615850e-47 |
| Msa0470850 | Msa0541700 | 0.824369 | 8.379003e-54 | -8.615850e-47 |
| Msa0471080 | Msa0541700 | 0.806963 | 6.372768e-50 | -8.615850e-47 |
| Msa0474120 | Msa0541700 | 0.808803 | 2.588704e-50 | -8.615850e-47 |
| Msa0474220 | Msa0541700 | 0.845250 | 4.564541e-59 | -8.615850e-47 |
| Msa0475080 | Msa0541700 | 0.819311 | 1.241346e-52 | -8.615850e-47 |
| Msa0478730 | Msa0541700 | 0.820999 | 5.098456e-53 | -8.615850e-47 |
| Msa0481580 | Msa0541700 | 0.812594 | 3.919846e-51 | -8.615850e-47 |
| Msa0246470 | Msa0541700 | 0.801059 | 1.076524e-48 | -8.615850e-47 |
| Msa0246510 | Msa0541700 | 0.805832 | 1.103330e-49 | -8.615850e-47 |
| Msa0249670 | Msa0541700 | 0.823584 | 1.280242e-53 | -8.615850e-47 |
| Msa0260640 | Msa0541700 | 0.822047 | 2.919482e-53 | -8.615850e-47 |
| Msa0260930 | Msa0541700 | 0.807985 | 3.867365e-50 | -8.615850e-47 |
| Msa0261020 | Msa0541700 | 0.803386 | 3.573464e-49 | -8.615850e-47 |
| Msa0266120 | Msa0541700 | 0.863133 | 3.094571e-64 | -8.615850e-47 |
| Msa0266150 | Msa0541700 | 0.819812 | 9.539501e-53 | -8.615850e-47 |
| Msa0269430 | Msa0541700 | 0.811513 | 6.742550e-51 | -8.615850e-47 |
| Msa0269660 | Msa0541700 | 0.818837 | 1.591127e-52 | -8.615850e-47 |
| Msa0284980 | Msa0541700 | 0.804089 | 2.554011e-49 | -8.615850e-47 |
| Msa0285200 | Msa0541700 | 0.800997 | 1.108195e-48 | -8.615850e-47 |
| Msa0285510 | Msa0541700 | 0.826118 | 3.232854e-54 | -8.615850e-47 |
| Msa0304040 | Msa0541700 | 0.852136 | 5.626308e-61 | -8.615850e-47 |
| Msa0304350 | Msa0541700 | 0.810274 | 1.250401e-50 | -8.615850e-47 |
| Msa0305810 | Msa0541700 | 0.803760 | 2.988566e-49 | -8.615850e-47 |
| Msa0305910 | Msa0541700 | 0.808087 | 3.678416e-50 | -8.615850e-47 |
| Msa0308300 | Msa0541700 | 0.809261 | 2.064567e-50 | -8.615850e-47 |
| Msa0309490 | Msa0541700 | 0.808267 | 3.368950e-50 | -8.615850e-47 |
| Msa0314980 | Msa0541700 | 0.802245 | 6.147544e-49 | -8.615850e-47 |
| Msa0323790 | Msa0541700 | 0.801846 | 7.424928e-49 | -8.615850e-47 |
| Msa0331070 | Msa0541700 | 0.801108 | 1.051705e-48 | -8.615850e-47 |
| Msa0336550 | Msa0541700 | 0.814993 | 1.161087e-51 | -8.615850e-47 |
| Msa0340830 | Msa0541700 | 0.811824 | 5.771626e-51 | -8.615850e-47 |
| Msa0340870 | Msa0541700 | 0.820895 | 5.384759e-53 | -8.615850e-47 |
| Msa0341710 | Msa0541700 | 0.809253 | 2.073425e-50 | -8.615850e-47 |
| Msa0355590 | Msa0541700 | 0.805601 | 1.233880e-49 | -8.615850e-47 |
| Msa0483090 | Msa0541700 | 0.821630 | 3.645664e-53 | -8.615850e-47 |
| Msa0483410 | Msa0541700 | 0.815506 | 8.928797e-52 | -8.615850e-47 |
| Msa0485260 | Msa0541700 | 0.810320 | 1.222540e-50 | -8.615850e-47 |
| Msa0486850 | Msa0541700 | 0.810992 | 8.748663e-51 | -8.615850e-47 |
| Msa0504640 | Msa0541700 | 0.819524 | 1.110258e-52 | -8.615850e-47 |
| Msa0508620 | Msa0541700 | 0.822014 | 2.971089e-53 | -8.615850e-47 |
| Msa0508660 | Msa0541700 | 0.824075 | 9.821751e-54 | -8.615850e-47 |
| Msa0508770 | Msa0541700 | 0.803377 | 3.588877e-49 | -8.615850e-47 |
| Msa0515400 | Msa0541700 | 0.832962 | 7.005633e-56 | -8.615850e-47 |
| Msa0515420 | Msa0541700 | 0.817950 | 2.527991e-52 | -8.615850e-47 |
| Msa0515830 | Msa0541700 | 0.804642 | 1.958364e-49 | -8.615850e-47 |
| Msa0522810 | Msa0541700 | 0.828268 | 9.879110e-55 | -8.615850e-47 |
| Msa0523400 | Msa0541700 | 0.823715 | 1.193269e-53 | -8.615850e-47 |
| Msa0527210 | Msa0541700 | 0.821305 | 4.333896e-53 | -8.615850e-47 |
| Msa0538020 | Msa0541700 | 0.823691 | 1.208399e-53 | -8.615850e-47 |
| Msa0538050 | Msa0541700 | 0.811552 | 6.611730e-51 | -8.615850e-47 |
| Msa0541700 | Msa0544390 | 0.814647 | 1.385055e-51 | -8.615850e-47 |
| Msa0541700 | Msa0550770 | 0.800932 | 1.142635e-48 | -8.615850e-47 |
| Msa0541700 | Msa0554700 | 0.808631 | 2.816173e-50 | -8.615850e-47 |
| Msa0541700 | Msa0558160 | 0.800264 | 1.563836e-48 | -8.615850e-47 |
| Msa0541700 | Msa0558800 | 0.823760 | 1.164211e-53 | -8.615850e-47 |
| Msa0541700 | Msa0559440 | 0.808806 | 2.584683e-50 | -8.615850e-47 |
| Msa0541700 | Msa0560010 | 0.837417 | 5.264134e-57 | -8.615850e-47 |
| Msa0541700 | Msa0562740 | 0.808685 | 2.742742e-50 | -8.615850e-47 |
| Msa0541700 | Msa0565430 | 0.804070 | 2.577291e-49 | -8.615850e-47 |
| Msa0541700 | Msa0565930 | 0.828634 | 8.061064e-55 | -8.615850e-47 |
| Msa0541700 | Msa0567360 | 0.807940 | 3.953943e-50 | -8.615850e-47 |
| Msa0541700 | Msa0567420 | 0.822594 | 2.178677e-53 | -8.615850e-47 |
| Msa0541700 | Msa0567490 | 0.817181 | 3.767436e-52 | -8.615850e-47 |
| Msa0541700 | Msa0567530 | 0.813089 | 3.053483e-51 | -8.615850e-47 |
| Msa0541700 | Msa0567970 | 0.818036 | 2.416938e-52 | -8.615850e-47 |
| Msa0541700 | Msa0569540 | 0.804219 | 2.399658e-49 | -8.615850e-47 |
| Msa0541700 | Msa0571220 | 0.837249 | 5.810344e-57 | -8.615850e-47 |
| Msa0541700 | Msa0578400 | 0.801295 | 9.633142e-49 | -8.615850e-47 |
| Msa0541700 | Msa0580410 | 0.804003 | 2.660428e-49 | -8.615850e-47 |
| Msa0541700 | Msa0581090 | 0.819399 | 1.185220e-52 | -8.615850e-47 |
| Msa0541700 | Msa0585720 | 0.824169 | 9.334570e-54 | -8.615850e-47 |
| Msa0541700 | Msa0614060 | 0.837054 | 6.518243e-57 | -8.615850e-47 |
| Msa0541700 | Msa0616570 | 0.820246 | 7.589956e-53 | -8.615850e-47 |
| Msa0541700 | Msa0616890 | 0.806132 | 9.540467e-50 | -8.615850e-47 |
| Msa0541700 | Msa0622800 | 0.816075 | 6.667349e-52 | -8.615850e-47 |
| Msa0541700 | Msa0623350 | 0.815480 | 9.048065e-52 | -8.615850e-47 |
| Msa0541700 | Msa0624260 | 0.808582 | 2.885763e-50 | -8.615850e-47 |
| Msa0541700 | Msa0624360 | 0.822598 | 2.173968e-53 | -8.615850e-47 |
| Msa0541700 | Msa0625900 | 0.828872 | 7.061207e-55 | -8.615850e-47 |
| Msa0541700 | Msa0626900 | 0.815591 | 8.547183e-52 | -8.615850e-47 |
| Msa0541700 | Msa0634900 | 0.814793 | 1.285730e-51 | -8.615850e-47 |
| Msa0541700 | Msa0638550 | 0.836554 | 8.742143e-57 | -8.615850e-47 |
| Msa0541700 | Msa0640780 | 0.836342 | 9.898930e-57 | -8.615850e-47 |
| Msa0541700 | Msa0646030 | 0.801958 | 7.041101e-49 | -8.615850e-47 |
| Msa0541700 | Msa0648410 | 0.806626 | 7.509144e-50 | -8.615850e-47 |
| Msa0541700 | Msa0655980 | 0.819081 | 1.400834e-52 | -8.615850e-47 |
| Msa0541700 | Msa0656570 | 0.816517 | 5.310605e-52 | -8.615850e-47 |
| Msa0541700 | Msa0660140 | 0.992792 | 1.819167e-195 | -8.615850e-47 |
| Msa0541700 | Msa0660160 | 0.814128 | 1.803927e-51 | -8.615850e-47 |
| Msa0541700 | Msa0662670 | 0.812894 | 3.368729e-51 | -8.615850e-47 |
| Msa0541700 | Msa0663580 | 0.838300 | 3.121834e-57 | -8.615850e-47 |
| Msa0541700 | Msa0663690 | 0.831652 | 1.478471e-55 | -8.615850e-47 |
| Msa0541700 | Msa0688760 | 0.805092 | 1.577206e-49 | -8.615850e-47 |
| Msa0541700 | Msa0688810 | 0.800875 | 1.173592e-48 | -8.615850e-47 |
| Msa0541700 | Msa0690920 | 0.813135 | 2.983753e-51 | -8.615850e-47 |
| Msa0541700 | Msa0697230 | 0.841016 | 6.135265e-58 | -8.615850e-47 |
| Msa0541700 | Msa0699900 | 0.821216 | 4.542066e-53 | -8.615850e-47 |
| Msa0541700 | Msa0700870 | 0.814128 | 1.803994e-51 | -8.615850e-47 |
| Msa0541700 | Msa0700930 | 0.817566 | 3.086253e-52 | -8.615850e-47 |
| Msa0541700 | Msa0703620 | 0.815734 | 7.941453e-52 | -8.615850e-47 |
| Msa0541700 | Msa0706200 | 0.862767 | 4.014566e-64 | -8.615850e-47 |
| Msa0541700 | Msa0708450 | 0.814622 | 1.402867e-51 | -8.615850e-47 |
| Msa0541700 | Msa0708840 | 0.833841 | 4.228684e-56 | -8.615850e-47 |
| Msa0541700 | Msa0708870 | 0.812803 | 3.526837e-51 | -8.615850e-47 |
| Msa0541700 | Msa0719330 | 0.823051 | 1.705874e-53 | -8.615850e-47 |
| Msa0541700 | Msa0729120 | 0.803971 | 2.702596e-49 | -8.615850e-47 |
| Msa0541700 | Msa0729740 | 0.800294 | 1.542078e-48 | -8.615850e-47 |
| Msa0541700 | Msa0730250 | 0.800352 | 1.500870e-48 | -8.615850e-47 |
| Msa0541700 | Msa0741710 | 0.802835 | 4.646017e-49 | -8.615850e-47 |
| Msa0541700 | Msa0748470 | 0.803759 | 2.990978e-49 | -8.615850e-47 |
| Msa0541700 | Msa0750490 | 0.813297 | 2.748361e-51 | -8.615850e-47 |
| Msa0541700 | Msa0754020 | 0.812028 | 5.208685e-51 | -8.615850e-47 |
| Msa0541700 | Msa0761930 | 0.813079 | 3.068331e-51 | -8.615850e-47 |
| Msa0541700 | Msa0766540 | 0.806823 | 6.820383e-50 | -8.615850e-47 |
| Msa0541700 | Msa0766910 | 0.812281 | 4.588923e-51 | -8.615850e-47 |
| Msa0541700 | Msa0770540 | 0.821228 | 4.514681e-53 | -8.615850e-47 |
| Msa0541700 | Msa0772160 | 0.835460 | 1.657036e-56 | -8.615850e-47 |
| Msa0541700 | Msa0786330 | 0.802982 | 4.332778e-49 | -8.615850e-47 |
| Msa0541700 | Msa0792840 | 0.813805 | 2.125067e-51 | -8.615850e-47 |
| Msa0541700 | Msa0795910 | 0.805200 | 1.497309e-49 | -8.615850e-47 |
| Msa0541700 | Msa0807100 | 0.807621 | 4.622198e-50 | -8.615850e-47 |
| Msa0541700 | Msa0807840 | 0.802530 | 5.370339e-49 | -8.615850e-47 |
| Msa0541700 | Msa0822800 | 0.805620 | 1.222511e-49 | -8.615850e-47 |
| Msa0541700 | Msa0833030 | 0.813280 | 2.772311e-51 | -8.615850e-47 |
| Msa0541700 | Msa0833360 | 0.811331 | 7.384341e-51 | -8.615850e-47 |
| Msa0541700 | Msa0833640 | -0.801284 | 9.682112e-49 | -8.615850e-47 |
| Msa0541700 | Msa0840450 | 0.810474 | 1.132049e-50 | -8.615850e-47 |
| Msa0541700 | Msa0842370 | 0.806401 | 8.375785e-50 | -8.615850e-47 |
| Msa0541700 | Msa0866310 | 0.808710 | 2.709740e-50 | -8.615850e-47 |
| Msa0541700 | Msa0872800 | 0.805913 | 1.061086e-49 | -8.615850e-47 |
| Msa0541700 | Msa0873070 | 0.808979 | 2.373559e-50 | -8.615850e-47 |
| Msa0541700 | Msa0876680 | 0.800252 | 1.572496e-48 | -8.615850e-47 |
| Msa0541700 | Msa0879940 | 0.801806 | 7.568893e-49 | -8.615850e-47 |
| Msa0541700 | Msa0880200 | 0.801929 | 7.139825e-49 | -8.615850e-47 |
| Msa0541700 | Msa0880370 | 0.844848 | 5.863712e-59 | -8.615850e-47 |
| Msa0541700 | Msa0883880 | 0.818258 | 2.153193e-52 | -8.615850e-47 |
| Msa0541700 | Msa0906100 | 0.811191 | 7.919996e-51 | -8.615850e-47 |
| Msa0541700 | Msa0908290 | 0.801143 | 1.034642e-48 | -8.615850e-47 |
| Msa0541700 | Msa0932040 | 0.829583 | 4.747137e-55 | -8.615850e-47 |
| Msa0541700 | Msa0934290 | 0.810873 | 9.283397e-51 | -8.615850e-47 |
| Msa0541700 | Msa0945520 | 0.818980 | 1.476792e-52 | -8.615850e-47 |
| Msa0541700 | Msa0946570 | 0.824316 | 8.621440e-54 | -8.615850e-47 |
| Msa0541700 | Msa0961200 | 0.801851 | 7.408710e-49 | -8.615850e-47 |
| Msa0541700 | Msa0967890 | 0.805870 | 1.083505e-49 | -8.615850e-47 |
| Msa0541700 | Msa0967920 | 0.844883 | 5.736705e-59 | -8.615850e-47 |
| Msa0541700 | Msa0970160 | 0.834409 | 3.048107e-56 | -8.615850e-47 |
| Msa0541700 | Msa0971780 | 0.808441 | 3.092978e-50 | -8.615850e-47 |
| Msa0541700 | Msa0978290 | 0.809748 | 1.623192e-50 | -8.615850e-47 |
| Msa0541700 | Msa1004300 | 0.810063 | 1.388483e-50 | -8.615850e-47 |
| Msa0541700 | Msa1015020 | 0.804204 | 2.416713e-49 | -8.615850e-47 |
| Msa0541700 | Msa1017610 | 0.806021 | 1.007055e-49 | -8.615850e-47 |
| Msa0541700 | Msa1020160 | 0.830807 | 2.385343e-55 | -8.615850e-47 |
| Msa0541700 | Msa1031620 | 0.830003 | 3.750204e-55 | -8.615850e-47 |
| Msa0541700 | Msa1031650 | 0.808311 | 3.296850e-50 | -8.615850e-47 |
| Msa0541700 | Msa1033460 | 0.830458 | 2.904267e-55 | -8.615850e-47 |
| Msa0541700 | Msa1036260 | 0.804198 | 2.423666e-49 | -8.615850e-47 |
| Msa0541700 | Msa1038040 | 0.829120 | 6.147253e-55 | -8.615850e-47 |
| Msa0541700 | Msa1039150 | 0.806794 | 6.917964e-50 | -8.615850e-47 |
| Msa0541700 | Msa1040030 | 0.831015 | 2.120536e-55 | -8.615850e-47 |
| Msa0541700 | Msa1042420 | 0.843234 | 1.588346e-58 | -8.615850e-47 |
| Msa0541700 | Msa1044050 | 0.824673 | 7.107867e-54 | -8.615850e-47 |
| Msa0541700 | Msa1066790 | 0.803114 | 4.068549e-49 | -8.615850e-47 |
| Msa0541700 | Msa1066980 | 0.804927 | 1.707546e-49 | -8.615850e-47 |
| Msa0541700 | Msa1068110 | 0.812514 | 4.079628e-51 | -8.615850e-47 |
| Msa0541700 | Msa1070710 | 0.811882 | 5.604478e-51 | -8.615850e-47 |
| Msa0541700 | Msa1071380 | 0.810209 | 1.291353e-50 | -8.615850e-47 |
| Msa0541700 | Msa1073140 | 0.831428 | 1.678340e-55 | -8.615850e-47 |
| Msa0541700 | Msa1078210 | 0.826145 | 3.185610e-54 | -8.615850e-47 |
| Msa0541700 | Msa1084210 | 0.815344 | 9.699746e-52 | -8.615850e-47 |
| Msa0541700 | Msa1088000 | 0.805098 | 1.572956e-49 | -8.615850e-47 |
| Msa0541700 | Msa1091450 | 0.802436 | 5.614904e-49 | -8.615850e-47 |
| Msa0541700 | Msa1098470 | 0.817185 | 3.760257e-52 | -8.615850e-47 |
| Msa0541700 | Msa1105680 | 0.802032 | 6.799135e-49 | -8.615850e-47 |
| Msa0541700 | Msa1106730 | 0.805396 | 1.362219e-49 | -8.615850e-47 |
| Msa0541700 | Msa1112230 | 0.812749 | 3.625270e-51 | -8.615850e-47 |
| Msa0541700 | Msa1113780 | 0.825868 | 3.707449e-54 | -8.615850e-47 |
| Msa0541700 | Msa1118870 | 0.824672 | 7.108392e-54 | -8.615850e-47 |
| Msa0541700 | Msa1118890 | 0.832250 | 1.052012e-55 | -8.615850e-47 |
| Msa0541700 | Msa1123440 | 0.812623 | 3.861686e-51 | -8.615850e-47 |
| Msa0541700 | Msa1126790 | 0.818752 | 1.663671e-52 | -8.615850e-47 |
| Msa0541700 | Msa1126810 | 0.817473 | 3.238104e-52 | -8.615850e-47 |
| Msa0541700 | Msa1126980 | 0.817976 | 2.493043e-52 | -8.615850e-47 |
| Msa0541700 | Msa1127530 | 0.818818 | 1.607351e-52 | -8.615850e-47 |
| Msa0541700 | Msa1128230 | 0.809721 | 1.644630e-50 | -8.615850e-47 |
| Msa0541700 | Msa1130070 | 0.802139 | 6.465264e-49 | -8.615850e-47 |
| Msa0541700 | Msa1132880 | 0.804455 | 2.142605e-49 | -8.615850e-47 |
| Msa0541700 | Msa1134830 | 0.810504 | 1.115608e-50 | -8.615850e-47 |
| Msa0541700 | Msa1136770 | 0.825200 | 5.335102e-54 | -8.615850e-47 |
| Msa0541700 | Msa1158540 | 0.823898 | 1.080631e-53 | -8.615850e-47 |
| Msa0541700 | Msa1160470 | 0.835599 | 1.528234e-56 | -8.615850e-47 |
| Msa0541700 | Msa1161550 | 0.814951 | 1.185777e-51 | -8.615850e-47 |
| Msa0541700 | Msa1165330 | 0.836851 | 7.345807e-57 | -8.615850e-47 |
| Msa0541700 | Msa1169780 | 0.803000 | 4.294436e-49 | -8.615850e-47 |
| Msa0541700 | Msa1171640 | 0.802144 | 6.450545e-49 | -8.615850e-47 |
| Msa0541700 | Msa1181370 | 0.810342 | 1.208808e-50 | -8.615850e-47 |
| Msa0541700 | Msa1182950 | 0.807117 | 5.910892e-50 | -8.615850e-47 |
| Msa0541700 | Msa1194480 | 0.803175 | 3.950845e-49 | -8.615850e-47 |
| Msa0541700 | Msa1197210 | 0.808186 | 3.505081e-50 | -8.615850e-47 |
| Msa0541700 | Msa1198280 | 0.815922 | 7.211774e-52 | -8.615850e-47 |
| Msa0541700 | Msa1207660 | 0.801210 | 1.002525e-48 | -8.615850e-47 |
| Msa0541700 | Msa1223520 | 0.817217 | 3.697117e-52 | -8.615850e-47 |
| Msa0541700 | Msa1223600 | 0.836156 | 1.103432e-56 | -8.615850e-47 |
| Msa0541700 | Msa1225240 | 0.822101 | 2.836069e-53 | -8.615850e-47 |
| Msa0541700 | Msa1227090 | 0.827105 | 1.879784e-54 | -8.615850e-47 |
| Msa0541700 | Msa1228600 | 0.818552 | 1.847115e-52 | -8.615850e-47 |
| Msa0541700 | Msa1229880 | 0.834305 | 3.236506e-56 | -8.615850e-47 |
| Msa0541700 | Msa1235960 | 0.810407 | 1.170343e-50 | -8.615850e-47 |
| Msa0541700 | Msa1235990 | 0.813302 | 2.741348e-51 | -8.615850e-47 |
| Msa0541700 | Msa1236990 | 0.820878 | 5.436022e-53 | -8.615850e-47 |
| Msa0541700 | Msa1251890 | 0.819835 | 9.425522e-53 | -8.615850e-47 |
| Msa0541700 | Msa1252220 | 0.808560 | 2.916606e-50 | -8.615850e-47 |
| Msa0541700 | Msa1263460 | 0.804190 | 2.432569e-49 | -8.615850e-47 |
| Msa0541700 | Msa1266750 | 0.805322 | 1.411833e-49 | -8.615850e-47 |
| Msa0541700 | Msa1267800 | 0.854705 | 1.029919e-61 | -8.615850e-47 |
| Msa0541700 | Msa1269370 | 0.819920 | 9.015313e-53 | -8.615850e-47 |
| Msa0541700 | Msa1270860 | 0.814449 | 1.532357e-51 | -8.615850e-47 |
| Msa0541700 | Msa1278080 | 0.819593 | 1.070738e-52 | -8.615850e-47 |
| Msa0541700 | Msa1279240 | 0.824579 | 7.479463e-54 | -8.615850e-47 |
| Msa0541700 | Msa1293030 | 0.804118 | 2.518314e-49 | -8.615850e-47 |
| Msa0541700 | Msa1305970 | 0.802519 | 5.397326e-49 | -8.615850e-47 |
| Msa0541700 | Msa1308010 | 0.809327 | 1.999210e-50 | -8.615850e-47 |
| Msa0541700 | Msa1310620 | 0.832311 | 1.016302e-55 | -8.615850e-47 |
| Msa0541700 | Msa1316090 | 0.812539 | 4.028928e-51 | -8.615850e-47 |
| Msa0541700 | Msa1317090 | 0.807010 | 6.227413e-50 | -8.615850e-47 |
| Msa0541700 | Msa1317340 | 0.828847 | 7.159214e-55 | -8.615850e-47 |
| Msa0541700 | Msa1320660 | 0.829673 | 4.512128e-55 | -8.615850e-47 |
| Msa0541700 | Msa1327690 | 0.804937 | 1.699628e-49 | -8.615850e-47 |
| Msa0541700 | Msa1331720 | 0.823508 | 1.334194e-53 | -8.615850e-47 |
| Msa0541700 | Msa1335130 | 0.806497 | 7.994256e-50 | -8.615850e-47 |
| Msa0541700 | Msa1335210 | 0.805066 | 1.596983e-49 | -8.615850e-47 |
| Msa0541700 | Msa1339310 | 0.805646 | 1.207228e-49 | -8.615850e-47 |
| Msa0541700 | Msa1346220 | 0.815163 | 1.064244e-51 | -8.615850e-47 |
| Msa0541700 | Msa1346340 | 0.809852 | 1.541531e-50 | -8.615850e-47 |
| Msa0541700 | Msa1348180 | 0.815244 | 1.021132e-51 | -8.615850e-47 |
| Msa0541700 | Msa1350350 | 0.817862 | 2.645281e-52 | -8.615850e-47 |
| Msa0541700 | Msa1356500 | 0.834017 | 3.822816e-56 | -8.615850e-47 |
| Msa0541700 | Msa1361090 | 0.803851 | 2.862023e-49 | -8.615850e-47 |
| Msa0541700 | Msa1361580 | 0.811941 | 5.440832e-51 | -8.615850e-47 |
| Msa0541700 | Msa1368800 | 0.816020 | 6.855974e-52 | -8.615850e-47 |
| Msa0541700 | Msa1369390 | 0.805469 | 1.314991e-49 | -8.615850e-47 |
| Msa0541700 | Msa1371540 | 0.815904 | 7.277592e-52 | -8.615850e-47 |
| Msa0541700 | Msa1373570 | 0.803838 | 2.879158e-49 | -8.615850e-47 |
| Msa0541700 | Msa1374210 | 0.804887 | 1.740932e-49 | -8.615850e-47 |
| Msa0541700 | Msa1374610 | 0.840160 | 1.027709e-57 | -8.615850e-47 |
| Msa0541700 | Msa1375980 | 0.815020 | 1.145169e-51 | -8.615850e-47 |
| Msa0541700 | Msa1379360 | 0.807151 | 5.814298e-50 | -8.615850e-47 |
| Msa0541700 | Msa1381830 | 0.802492 | 5.469445e-49 | -8.615850e-47 |
| Msa0541700 | Msa1382100 | 0.818796 | 1.625657e-52 | -8.615850e-47 |
| Msa0541700 | Msa1387650 | 0.805752 | 1.146863e-49 | -8.615850e-47 |
| Msa0541700 | Msa1392570 | 0.824059 | 9.909300e-54 | -8.615850e-47 |
| Msa0541700 | Msa1393350 | 0.811011 | 8.664452e-51 | -8.615850e-47 |
| Msa0541700 | Msa1397560 | 0.807584 | 4.707314e-50 | -8.615850e-47 |
| Msa0541700 | Msa1398150 | 0.817103 | 3.922320e-52 | -8.615850e-47 |
| Msa0541700 | Msa1403820 | 0.807007 | 6.237001e-50 | -8.615850e-47 |
| Msa0541700 | Msa1407770 | 0.812564 | 3.978243e-51 | -8.615850e-47 |
| Msa0541700 | Msa1407860 | 0.814356 | 1.606367e-51 | -8.615850e-47 |
| Msa0541700 | Msa1408860 | 0.803208 | 3.890430e-49 | -8.615850e-47 |
| Msa0541700 | Msa1414000 | 0.805993 | 1.020932e-49 | -8.615850e-47 |
| Msa0541700 | Msa1416850 | 0.801433 | 9.024072e-49 | -8.615850e-47 |
| Msa0541700 | Msa1418010 | 0.800712 | 1.267407e-48 | -8.615850e-47 |
| Msa0541700 | Msa1418210 | 0.815199 | 1.044828e-51 | -8.615850e-47 |
| Msa0541700 | Msa1420130 | 0.824431 | 8.100022e-54 | -8.615850e-47 |
| Msa0541700 | Msa1425600 | 0.800223 | 1.594056e-48 | -8.615850e-47 |
| Msa0541700 | Msa1426690 | 0.802910 | 4.484004e-49 | -8.615850e-47 |
| Msa0541700 | Msa1432100 | 0.805851 | 1.093216e-49 | -8.615850e-47 |
| Msa0541700 | Msa1432350 | 0.806229 | 9.103927e-50 | -8.615850e-47 |
| Msa0541700 | Msa1437740 | 0.811229 | 7.772706e-51 | -8.615850e-47 |
| Msa0541700 | Msa1448410 | 0.802411 | 5.683310e-49 | -8.615850e-47 |
| Msa0541700 | Msa1449510 | 0.838093 | 3.527984e-57 | -8.615850e-47 |
| Msa0541700 | Msa1451200 | 0.821286 | 4.376258e-53 | -8.615850e-47 |
| Msa0541700 | Msa1453900 | 0.805361 | 1.385219e-49 | -8.615850e-47 |
| Msa0541700 | Msa1459680 | 0.822416 | 2.397360e-53 | -8.615850e-47 |
| Msa0541700 | Msa1465950 | 0.809289 | 2.037083e-50 | -8.615850e-47 |
| Msa0541700 | Msa1466170 | 0.816195 | 6.267412e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0541700 | MtrunA17_Chr8g0385371 | 98.438 | 192 | 3 | 0 | 1 | 192 | 1 | 192 | 4.67e-138 | 383 |
| Msa0541700 | MtrunA17_Chr4g0047141 | 34.054 | 185 | 94 | 6 | 20 | 188 | 61 | 233 | 6.31e-13 | 65.1 |
| Msa0541700 | MtrunA17_Chr2g0282361 | 34.826 | 201 | 93 | 10 | 7 | 188 | 71 | 252 | 4.87e-12 | 62.8 |
| Msa0541700 | MtrunA17_Chr2g0317321 | 32.683 | 205 | 91 | 9 | 14 | 190 | 58 | 243 | 8.07e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0541700 | AT5G08480.2 | 56.983 | 179 | 55 | 6 | 16 | 191 | 13 | 172 | 6.74e-46 | 149 |
| Msa0541700 | AT5G08480.3 | 56.983 | 179 | 55 | 6 | 16 | 191 | 13 | 172 | 6.74e-46 | 149 |
| Msa0541700 | AT5G08480.1 | 47.486 | 179 | 41 | 5 | 16 | 191 | 13 | 141 | 7.45e-31 | 110 |
| Msa0541700 | AT5G53830.1 | 32.828 | 198 | 95 | 5 | 20 | 186 | 49 | 239 | 4.34e-12 | 63.2 |
| Msa0541700 | AT1G28280.1 | 33.810 | 210 | 87 | 11 | 11 | 188 | 49 | 238 | 8.86e-11 | 59.7 |
| Msa0541700 | AT1G28280.2 | 33.810 | 210 | 87 | 11 | 11 | 188 | 49 | 238 | 8.89e-11 | 59.7 |
Find 49 sgRNAs with CRISPR-Local
Find 49 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACAAACACAGGTGCATTT+AGG | 0.187922 | 4_1:-25730923 | Msa0541700:CDS |
| GTTCTCTCAGTTAACTATTA+TGG | 0.217006 | 4_1:-25730619 | Msa0541700:CDS |
| TTCCTTCTTTCATGGAGTTT+TGG | 0.237618 | 4_1:+25730807 | None:intergenic |
| GGAAACAAGTTAAGCAATTC+TGG | 0.246716 | 4_1:+25730471 | None:intergenic |
| TCATGCATTTCCTTCTTTCA+TGG | 0.261349 | 4_1:+25730799 | None:intergenic |
| GGTGGTGTTCTCTTCGTAAT+AGG | 0.264699 | 4_1:+25730828 | None:intergenic |
| GGTTTAACAATCTCAAGTTT+TGG | 0.319524 | 4_1:+25730774 | None:intergenic |
| CACAAACACAGGTGCATTTA+GGG | 0.321361 | 4_1:-25730922 | Msa0541700:CDS |
| TTTCCTTCAAGTCCTGTATC+AGG | 0.338299 | 4_1:-25730690 | Msa0541700:CDS |
| GAAGTAGTGCAAAGATTAAC+AGG | 0.361566 | 4_1:-25730900 | Msa0541700:CDS |
| TGTTTGTGATATTGAAGATT+TGG | 0.376002 | 4_1:+25730753 | None:intergenic |
| TAGGTGCAACCTTTGTAGTT+TGG | 0.379631 | 4_1:+25730847 | None:intergenic |
| GTGTGAACAAATGTTGTTAG+TGG | 0.401194 | 4_1:+25730942 | None:intergenic |
| CTTTGTTGCATTGCCTTCTG+AGG | 0.427730 | 4_1:+25730875 | None:intergenic |
| CCAGTACATGGTTCAACAAC+AGG | 0.437636 | 4_1:-25730975 | Msa0541700:CDS |
| CATACTTTCTCACATGCCTT+AGG | 0.439034 | 4_1:+25730438 | None:intergenic |
| TTTGTTGCATTGCCTTCTGA+GGG | 0.457769 | 4_1:+25730876 | None:intergenic |
| GTTTCCACTGGCATCTCCTA+AGG | 0.476906 | 4_1:-25730454 | Msa0541700:CDS |
| GAATTTCTTGACTTAGAAGA+AGG | 0.481290 | 4_1:+25730717 | None:intergenic |
| CTTGCTTTAGACCTGGGTGA+TGG | 0.493410 | 4_1:+25730507 | None:intergenic |
| GAACTTCCACTACCTGATAC+AGG | 0.493636 | 4_1:+25730678 | None:intergenic |
| GTGGAAGGTGTGGTAGGGCT+TGG | 0.499380 | 4_1:+25730645 | None:intergenic |
| CTACCTGATACAGGACTTGA+AGG | 0.504395 | 4_1:+25730687 | None:intergenic |
| ATTGCTTAACTTGTTTCCAC+TGG | 0.509456 | 4_1:-25730466 | Msa0541700:CDS |
| GAAGCCACTTGCTTTAGACC+TGG | 0.517471 | 4_1:+25730500 | None:intergenic |
| TCAAGTCCTGTATCAGGTAG+TGG | 0.519505 | 4_1:-25730684 | Msa0541700:CDS |
| AAGCCACTTGCTTTAGACCT+GGG | 0.539510 | 4_1:+25730501 | None:intergenic |
| CACCAAAACTCCATGAAAGA+AGG | 0.543366 | 4_1:-25730809 | Msa0541700:CDS |
| CTCAGAAGGCAATGCAACAA+AGG | 0.546327 | 4_1:-25730874 | Msa0541700:CDS |
| ATGGAGAAGCCACCAGTACA+TGG | 0.555074 | 4_1:-25730987 | Msa0541700:CDS |
| CCTGTTGTTGAACCATGTAC+TGG | 0.565708 | 4_1:+25730975 | None:intergenic |
| AACAATGTGGAAGGTGTGGT+AGG | 0.566267 | 4_1:+25730639 | None:intergenic |
| AAATCTGATTGTGATGGGAA+TGG | 0.567485 | 4_1:-25731006 | None:intergenic |
| AGATTAACAGGTCCCTCAGA+AGG | 0.568541 | 4_1:-25730888 | Msa0541700:CDS |
| ACAATGTGGAAGGTGTGGTA+GGG | 0.605585 | 4_1:+25730640 | None:intergenic |
| GTTGTTGAACCATGTACTGG+TGG | 0.616693 | 4_1:+25730978 | None:intergenic |
| TGGAAGATGAAAAGAAACAA+GGG | 0.617549 | 4_1:-25730599 | Msa0541700:CDS |
| ACATTTGTTCACACAAACAC+AGG | 0.619702 | 4_1:-25730933 | Msa0541700:CDS |
| ATGGAAGATGAAAAGAAACA+AGG | 0.623994 | 4_1:-25730600 | Msa0541700:CDS |
| AACTGAGAGAACAATGTGGA+AGG | 0.625030 | 4_1:+25730630 | None:intergenic |
| CTTCAATATCACAAACAACC+AGG | 0.631097 | 4_1:-25730747 | Msa0541700:CDS |
| TCACCCAGGTCTAAAGCAAG+TGG | 0.631290 | 4_1:-25730504 | Msa0541700:CDS |
| AGAAAGCTATCAAAGAGAGA+CGG | 0.633848 | 4_1:-25730542 | Msa0541700:CDS |
| TTTATTTGCATCCATCACCC+AGG | 0.643004 | 4_1:-25730518 | Msa0541700:CDS |
| TTAGAAGAAGGTGATGCACC+TGG | 0.665275 | 4_1:+25730729 | None:intergenic |
| AAAGGAAGACCAAACTACAA+AGG | 0.666842 | 4_1:-25730856 | Msa0541700:CDS |
| AGAGAACAATGTGGAAGGTG+TGG | 0.689227 | 4_1:+25730635 | None:intergenic |
| CATGCCTTAGGAGATGCCAG+TGG | 0.723253 | 4_1:+25730450 | None:intergenic |
| AGTTAACTGAGAGAACAATG+TGG | 0.758270 | 4_1:+25730626 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TGTTTGTGATATTGAAGATT+TGG | + | chr4_1:25730680-25730699 | None:intergenic | 25.0% |
| ! | GGTTTAACAATCTCAAGTTT+TGG | + | chr4_1:25730659-25730678 | None:intergenic | 30.0% |
| GAATTTCTTGACTTAGAAGA+AGG | + | chr4_1:25730716-25730735 | None:intergenic | 30.0% | |
| GTTCTCTCAGTTAACTATTA+TGG | - | chr4_1:25730811-25730830 | Msa0541700:CDS | 30.0% | |
| ATGGAAGATGAAAAGAAACA+AGG | - | chr4_1:25730830-25730849 | Msa0541700:CDS | 30.0% | |
| TGGAAGATGAAAAGAAACAA+GGG | - | chr4_1:25730831-25730850 | Msa0541700:CDS | 30.0% | |
| GTGTGAACAAATGTTGTTAG+TGG | + | chr4_1:25730491-25730510 | None:intergenic | 35.0% | |
| ACATTTGTTCACACAAACAC+AGG | - | chr4_1:25730497-25730516 | Msa0541700:CDS | 35.0% | |
| GAAGTAGTGCAAAGATTAAC+AGG | - | chr4_1:25730530-25730549 | Msa0541700:CDS | 35.0% | |
| AAAGGAAGACCAAACTACAA+AGG | - | chr4_1:25730574-25730593 | Msa0541700:CDS | 35.0% | |
| ! | TTCCTTCTTTCATGGAGTTT+TGG | + | chr4_1:25730626-25730645 | None:intergenic | 35.0% |
| TCATGCATTTCCTTCTTTCA+TGG | + | chr4_1:25730634-25730653 | None:intergenic | 35.0% | |
| CTTCAATATCACAAACAACC+AGG | - | chr4_1:25730683-25730702 | Msa0541700:CDS | 35.0% | |
| AGTTAACTGAGAGAACAATG+TGG | + | chr4_1:25730807-25730826 | None:intergenic | 35.0% | |
| AGAAAGCTATCAAAGAGAGA+CGG | - | chr4_1:25730888-25730907 | Msa0541700:CDS | 35.0% | |
| GGAAACAAGTTAAGCAATTC+TGG | + | chr4_1:25730962-25730981 | None:intergenic | 35.0% | |
| !! | ATTGCTTAACTTGTTTCCAC+TGG | - | chr4_1:25730964-25730983 | Msa0541700:CDS | 35.0% |
| ACACAAACACAGGTGCATTT+AGG | - | chr4_1:25730507-25730526 | Msa0541700:CDS | 40.0% | |
| CACAAACACAGGTGCATTTA+GGG | - | chr4_1:25730508-25730527 | Msa0541700:CDS | 40.0% | |
| TTTGTTGCATTGCCTTCTGA+GGG | + | chr4_1:25730557-25730576 | None:intergenic | 40.0% | |
| TAGGTGCAACCTTTGTAGTT+TGG | + | chr4_1:25730586-25730605 | None:intergenic | 40.0% | |
| !! | CTTCTTTCATGGAGTTTTGG+TGG | + | chr4_1:25730623-25730642 | None:intergenic | 40.0% |
| CACCAAAACTCCATGAAAGA+AGG | - | chr4_1:25730621-25730640 | Msa0541700:CDS | 40.0% | |
| TTTCCTTCAAGTCCTGTATC+AGG | - | chr4_1:25730740-25730759 | Msa0541700:CDS | 40.0% | |
| AACTGAGAGAACAATGTGGA+AGG | + | chr4_1:25730803-25730822 | None:intergenic | 40.0% | |
| TTTATTTGCATCCATCACCC+AGG | - | chr4_1:25730912-25730931 | Msa0541700:CDS | 40.0% | |
| CATACTTTCTCACATGCCTT+AGG | + | chr4_1:25730995-25731014 | None:intergenic | 40.0% | |
| GTTGTTGAACCATGTACTGG+TGG | + | chr4_1:25730455-25730474 | None:intergenic | 45.0% | |
| CCTGTTGTTGAACCATGTAC+TGG | + | chr4_1:25730458-25730477 | None:intergenic | 45.0% | |
| CCAGTACATGGTTCAACAAC+AGG | - | chr4_1:25730455-25730474 | Msa0541700:CDS | 45.0% | |
| AGATTAACAGGTCCCTCAGA+AGG | - | chr4_1:25730542-25730561 | Msa0541700:CDS | 45.0% | |
| CTTTGTTGCATTGCCTTCTG+AGG | + | chr4_1:25730558-25730577 | None:intergenic | 45.0% | |
| CTCAGAAGGCAATGCAACAA+AGG | - | chr4_1:25730556-25730575 | Msa0541700:CDS | 45.0% | |
| GGTGGTGTTCTCTTCGTAAT+AGG | + | chr4_1:25730605-25730624 | None:intergenic | 45.0% | |
| TTAGAAGAAGGTGATGCACC+TGG | + | chr4_1:25730704-25730723 | None:intergenic | 45.0% | |
| CTACCTGATACAGGACTTGA+AGG | + | chr4_1:25730746-25730765 | None:intergenic | 45.0% | |
| TCAAGTCCTGTATCAGGTAG+TGG | - | chr4_1:25730746-25730765 | Msa0541700:CDS | 45.0% | |
| GAACTTCCACTACCTGATAC+AGG | + | chr4_1:25730755-25730774 | None:intergenic | 45.0% | |
| ! | ACAATGTGGAAGGTGTGGTA+GGG | + | chr4_1:25730793-25730812 | None:intergenic | 45.0% |
| ! | AACAATGTGGAAGGTGTGGT+AGG | + | chr4_1:25730794-25730813 | None:intergenic | 45.0% |
| AGAGAACAATGTGGAAGGTG+TGG | + | chr4_1:25730798-25730817 | None:intergenic | 45.0% | |
| ! | AAGCCACTTGCTTTAGACCT+GGG | + | chr4_1:25730932-25730951 | None:intergenic | 45.0% |
| ATGGAGAAGCCACCAGTACA+TGG | - | chr4_1:25730443-25730462 | Msa0541700:CDS | 50.0% | |
| ! | CTTGCTTTAGACCTGGGTGA+TGG | + | chr4_1:25730926-25730945 | None:intergenic | 50.0% |
| ! | TCACCCAGGTCTAAAGCAAG+TGG | - | chr4_1:25730926-25730945 | Msa0541700:CDS | 50.0% |
| ! | GAAGCCACTTGCTTTAGACC+TGG | + | chr4_1:25730933-25730952 | None:intergenic | 50.0% |
| GTTTCCACTGGCATCTCCTA+AGG | - | chr4_1:25730976-25730995 | Msa0541700:CDS | 50.0% | |
| CATGCCTTAGGAGATGCCAG+TGG | + | chr4_1:25730983-25731002 | None:intergenic | 55.0% | |
| ! | GTGGAAGGTGTGGTAGGGCT+TGG | + | chr4_1:25730788-25730807 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 25730437 | 25731015 | 25730437 | ID=Msa0541700;Name=Msa0541700 |
| chr4_1 | mRNA | 25730437 | 25731015 | 25730437 | ID=Msa0541700-mRNA-1;Parent=Msa0541700;Name=Msa0541700-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|-1|0|1|-1|1|1|0|192 |
| chr4_1 | exon | 25730437 | 25731015 | 25730437 | ID=Msa0541700-mRNA-1:exon:6988;Parent=Msa0541700-mRNA-1 |
| chr4_1 | CDS | 25730437 | 25731015 | 25730437 | ID=Msa0541700-mRNA-1:cds;Parent=Msa0541700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
