AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0771860


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0771860 MtrunA17_Chr5g0425781 98.221 506 9 0 1 506 1 506 0.0 1007
Msa0771860 MtrunA17_Chr8g0382381 69.515 515 137 3 1 497 2 514 0.0 721
Msa0771860 MtrunA17_Chr8g0382331 67.723 505 147 2 1 493 1 501 0.0 685
Msa0771860 MtrunA17_Chr8g0382321 66.867 498 149 5 1 497 2 484 0.0 626
Msa0771860 MtrunA17_Chr5g0403601 41.328 467 252 5 5 459 38 494 2.13e-109 334
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0771860 AT1G78130.1 76.569 478 105 3 1 474 1 475 0.0 723
Msa0771860 AT5G10190.1 68.675 498 143 3 1 498 1 485 0.0 704
Msa0771860 AT5G10190.2 72.126 348 93 1 1 348 1 344 0.0 513
Msa0771860 AT5G10190.3 61.789 369 128 3 130 498 1 356 2.98e-166 474
Msa0771860 AT4G36790.1 43.764 457 245 6 5 459 42 488 1.59e-121 365
Msa0771860 AT2G18590.1 37.500 464 264 7 12 459 19 472 3.56e-98 305

Find 137 sgRNAs with CRISPR-Local

Find 264 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTCCTCCACTTTCTTTC+AGG 0.114164 5_2:+45455984 Msa0771860:CDS
TGGTTTGATGCTTGTCATTT+TGG 0.163962 5_2:+45457734 Msa0771860:CDS
AGAATTATCCTCCCTGAATT+TGG 0.189354 5_2:-45457624 None:intergenic
TCCAGGCATCTTCCAAATTC+AGG 0.202141 5_2:+45457612 Msa0771860:CDS
GCAGTTTCGCGAGGATTAAA+TGG 0.243218 5_2:+45457039 Msa0771860:CDS
GCGATACCAAAGACTGTTAT+TGG 0.248840 5_2:-45457210 None:intergenic
ATTGTTGCACAGGGTGTTAC+TGG 0.259078 5_2:+45457441 Msa0771860:CDS
AACAATCGTGGCATGGCTTT+TGG 0.262625 5_2:+45457123 Msa0771860:CDS
ATCTTCGAAATGTGGATCTT+TGG 0.269283 5_2:-45457304 None:intergenic
TTTGGATGGCTTCAACTAAC+TGG 0.306249 5_2:+45457141 Msa0771860:CDS
CACCCTGTGCAACAATTATC+TGG 0.310837 5_2:-45457434 None:intergenic
GCACTATATCCTTTGGGAAT+AGG 0.313664 5_2:-45458366 None:intergenic
GGGTTGAGAAATTGGGAGTT+TGG 0.316581 5_2:-45455608 None:intergenic
ATTCTCCAACTTAGCTGATT+AGG 0.317353 5_2:+45458683 Msa0771860:CDS
ATAGCTCCAATAACAGTCTT+TGG 0.331343 5_2:+45457204 Msa0771860:CDS
TTGAGATGCACTATATCCTT+TGG 0.332695 5_2:-45458373 None:intergenic
GTGGCGAGGTACGCGGCAAT+TGG 0.336066 5_2:-45455892 None:intergenic
TGGAGTAAGAGATTTGTTTC+AGG 0.338181 5_2:+45457380 Msa0771860:CDS
GTTTCTGATTTCATCTCATA+TGG 0.338738 5_2:-45455709 None:intergenic
AGAATTTCATTTCATATTGT+TGG 0.341439 5_2:+45457240 Msa0771860:CDS
AGTGAATCTAGCTGGAATAA+TGG 0.349156 5_2:+45455747 Msa0771860:CDS
CGGTTTGTTTGGTGGTAAGA+TGG 0.354936 5_2:+45457578 Msa0771860:CDS
CCAGACCAAAATGTTTCCTT+TGG 0.360236 5_2:-45457360 None:intergenic
GGTTGAGAAATTGGGAGTTT+GGG 0.360752 5_2:-45455607 None:intergenic
ATCAGTAGAGTCTGCAACTA+AGG 0.372153 5_2:-45457097 None:intergenic
AGGAAGCCAAATCGGTTACT+AGG 0.376042 5_2:+45457400 Msa0771860:CDS
CGAAATCCTAGTAACCGATT+TGG 0.378085 5_2:-45457406 None:intergenic
GTTCTATTACAATCCATGTT+TGG 0.379424 5_2:-45458801 None:intergenic
AAAATTTCGTGTTTGCTTAG+TGG 0.384197 5_2:+45458734 Msa0771860:three_prime_UTR
TGGGAGTTTGGGACTTTGAC+TGG 0.386546 5_2:-45455596 None:intergenic
GCAACTAAGGACTGAATTGC+AGG 0.390198 5_2:-45457084 None:intergenic
AAGTCTCTTTACACAGCAAT+AGG 0.390577 5_2:+45458435 Msa0771860:CDS
AAAATGTTTCCTTTGGAACT+TGG 0.393994 5_2:-45457353 None:intergenic
CCAGGCATCTTCCAAATTCA+GGG 0.398791 5_2:+45457613 Msa0771860:CDS
AAGTTCCAAAGGAAACATTT+TGG 0.400153 5_2:+45457355 Msa0771860:CDS
CCATGTGACAATGCTGTAGA+TGG 0.404429 5_2:-45457714 None:intergenic
AAGAAAATATATTGCTCTAC+AGG 0.410601 5_2:+45458652 Msa0771860:CDS
TGAGATGCACTATATCCTTT+GGG 0.411603 5_2:-45458372 None:intergenic
AGTTCTGTTGGCGGTTTGTT+TGG 0.415841 5_2:+45457567 Msa0771860:CDS
GGAAATCTCGGTTCAGTTGT+TGG 0.416800 5_2:+45457162 Msa0771860:CDS
TACTGGCTCCTTTCCTTGGT+CGG 0.418609 5_2:+45457458 Msa0771860:CDS
CGTGCTCATGTTATTGCTCT+TGG 0.420574 5_2:+45455925 Msa0771860:CDS
GATGACAATGTAAATTTGTA+TGG 0.434762 5_2:+45458931 Msa0771860:three_prime_UTR
GGATTAATAAGCATTATAGT+TGG 0.436151 5_2:+45457261 Msa0771860:CDS
GTGTTACTGGCTCCTTTCCT+TGG 0.438447 5_2:+45457454 Msa0771860:CDS
AGATCCACATTTCGAAGATA+AGG 0.439343 5_2:+45457308 Msa0771860:CDS
CCCTGAATTTGGAAGATGCC+TGG 0.441254 5_2:-45457613 None:intergenic
CTAATGCATACACACTTGTC+CGG 0.443519 5_2:-45458263 None:intergenic
AATGACCTAATCAGCTAAGT+TGG 0.447237 5_2:-45458688 None:intergenic
ACACTTGTCCGGGATCTCTC+TGG 0.448101 5_2:-45458252 None:intergenic
ATAAGTGAAAGATAAAACTA+TGG 0.449330 5_2:-45458855 None:intergenic
AAGTCCGAGGAATTGTCTAT+TGG 0.454075 5_2:+45458594 Msa0771860:CDS
AGATGGGAGATATCCTTTCC+AGG 0.454599 5_2:+45457595 Msa0771860:CDS
TTTCCTCATAGCTTTGTTTG+TGG 0.459951 5_2:+45457539 Msa0771860:CDS
CAGTTTCGCGAGGATTAAAT+GGG 0.460252 5_2:+45457040 Msa0771860:CDS
CCGAGAGAATGCTTCATCAT+TGG 0.462160 5_2:+45458410 Msa0771860:CDS
TTTGTTTCAGGAAGCCAAAT+CGG 0.466439 5_2:+45457392 Msa0771860:CDS
TTTCCAGATAATTGTTGCAC+AGG 0.468519 5_2:+45457431 Msa0771860:CDS
TGGCGAGGTACGCGGCAATT+GGG 0.470863 5_2:-45455891 None:intergenic
TCGCGAGGATTAAATGGGAT+TGG 0.473278 5_2:+45457045 Msa0771860:CDS
GATCCACATTTCGAAGATAA+GGG 0.476377 5_2:+45457309 Msa0771860:CDS
GGGCTCTTTATATCTTGGAA+TGG 0.479081 5_2:+45457756 Msa0771860:CDS
AGATAGTTCCAGAGAGATCC+CGG 0.480678 5_2:+45458244 Msa0771860:CDS
ATAACAGTCTTTGGTATCGC+TGG 0.482588 5_2:+45457213 Msa0771860:CDS
GGTTTGTTTGGTGGTAAGAT+GGG 0.486167 5_2:+45457579 Msa0771860:CDS
ATTAAACAGCATAGAGCCAT+TGG 0.492469 5_2:-45458462 None:intergenic
AATACATACTTATTTGTAGC+AGG 0.492841 5_2:-45457780 None:intergenic
CATTCAAAAGTTTATAGAGA+AGG 0.500746 5_2:+45458707 Msa0771860:three_prime_UTR
GATGGAGGCTTTAATAGAAT+CGG 0.503156 5_2:+45458533 Msa0771860:CDS
CTCTGGATCCGCGATCCCCT+TGG 0.505511 5_2:+45457659 Msa0771860:CDS
ATTCTAGCACAGATAAGCTC+TGG 0.506952 5_2:+45457642 Msa0771860:CDS
ATGCATTACCTGAAAGAAAG+TGG 0.511225 5_2:-45455992 None:intergenic
CAATGTAAATTTGTATGGTC+TGG 0.511725 5_2:+45458936 Msa0771860:three_prime_UTR
TCTTTCTCTGTCTCTCGGAT+AGG 0.515677 5_2:-45458505 None:intergenic
CCAACTTCTTTGTATACACC+GGG 0.516438 5_2:-45455793 None:intergenic
ATTCAAAAGTTTATAGAGAA+GGG 0.517026 5_2:+45458708 Msa0771860:three_prime_UTR
AATGCTGTAGATGGATCATC+TGG 0.517085 5_2:-45457705 None:intergenic
AGACAGAGAAAGAGCTAGGA+TGG 0.519279 5_2:+45458515 Msa0771860:CDS
TCTGTTGGCGGTTTGTTTGG+TGG 0.520282 5_2:+45457570 Msa0771860:CDS
CAGCAAAAGAATCGCTGCCA+AGG 0.521565 5_2:-45457676 None:intergenic
CTAGCTCTTTCTCTGTCTCT+CGG 0.528162 5_2:-45458510 None:intergenic
ACCAACTTCTTTGTATACAC+CGG 0.530901 5_2:-45455794 None:intergenic
TTGTCTATTGGAGATTATGA+TGG 0.531968 5_2:+45458606 Msa0771860:CDS
ATGCAGCATATTGAATCAGA+TGG 0.533581 5_2:+45458558 Msa0771860:CDS
TTTGTGGTTGCAAGTTCTGT+TGG 0.534891 5_2:+45457555 Msa0771860:CDS
GGGAGTTTGGGACTTTGACT+GGG 0.535985 5_2:-45455595 None:intergenic
ATTTCGTGTTTGCTTAGTGG+TGG 0.536496 5_2:+45458737 Msa0771860:three_prime_UTR
CGAGAGACAGAGAAAGAGCT+AGG 0.537790 5_2:+45458511 Msa0771860:CDS
GTGGTTGCAAGTTCTGTTGG+CGG 0.543374 5_2:+45457558 Msa0771860:CDS
AGCAAAAGAATCGCTGCCAA+GGG 0.555323 5_2:-45457675 None:intergenic
ATCTCCAATAGACAATTCCT+CGG 0.558786 5_2:-45458598 None:intergenic
CTGAAAGAAAGTGGAGGAGA+AGG 0.560090 5_2:-45455983 None:intergenic
TGAGACAAAATTCCCACTGC+AGG 0.563509 5_2:-45458324 None:intergenic
CCCGGTGTATACAAAGAAGT+TGG 0.563732 5_2:+45455793 Msa0771860:CDS
CATACTGACCCTACAGGACT+CGG 0.564862 5_2:+45455826 Msa0771860:CDS
TAAGCGAACCGAGTCCTGTA+GGG 0.570478 5_2:-45455834 None:intergenic
CCAATGATGAAGCATTCTCT+CGG 0.572353 5_2:-45458410 None:intergenic
GACAAAATTCCCACTGCAGG+AGG 0.575397 5_2:-45458321 None:intergenic
CAGTCTTTGGTATCGCTGGT+TGG 0.575840 5_2:+45457217 Msa0771860:CDS
CCGATGTGGTTAGAGCTGAC+TGG 0.580559 5_2:+45457495 Msa0771860:CDS
TAATGCATACACACTTGTCC+GGG 0.580587 5_2:-45458262 None:intergenic
GCTCTTCATACTGACCCTAC+AGG 0.582844 5_2:+45455820 Msa0771860:CDS
AATCTCGGTTCAGTTGTTGG+TGG 0.587237 5_2:+45457165 Msa0771860:CDS
TTGTGTACAGTGTTATACAT+AGG 0.588288 5_2:+45458909 Msa0771860:three_prime_UTR
CTTCAACTAACTGGAAATCT+CGG 0.588590 5_2:+45457150 Msa0771860:CDS
TTATCTTTCACTTATGAGGG+AGG 0.590654 5_2:+45458863 Msa0771860:three_prime_UTR
AAGAAGCTTGAACAATTGAT+CGG 0.593332 5_2:-45455864 None:intergenic
CCATCTACAGCATTGTCACA+TGG 0.595436 5_2:+45457714 Msa0771860:CDS
CACAGCAATAGGAATTCCAA+TGG 0.596815 5_2:+45458446 Msa0771860:CDS
GCAAACGACAAAGCCGACCA+AGG 0.597047 5_2:-45457471 None:intergenic
CGACAAAGCCGACCAAGGAA+AGG 0.597478 5_2:-45457466 None:intergenic
AGATAGCAACCAAGTTCCAA+AGG 0.597801 5_2:+45457344 Msa0771860:CDS
TGCAGCATATTGAATCAGAT+GGG 0.597818 5_2:+45458559 Msa0771860:CDS
CAACCACAAACAAAGCTATG+AGG 0.601313 5_2:-45457542 None:intergenic
TTCCAGATAATTGTTGCACA+GGG 0.601749 5_2:+45457432 Msa0771860:CDS
AATTTGGAAGATGCCTGGAA+AGG 0.607041 5_2:-45457608 None:intergenic
CAGAGAAAGAGCTAGGATGG+AGG 0.611762 5_2:+45458518 Msa0771860:CDS
AATCGCTGCCAAGGGGATCG+CGG 0.612360 5_2:-45457667 None:intergenic
CAAGTGTGTATGCATTAGAT+CGG 0.615142 5_2:+45458268 Msa0771860:CDS
TGATGATAACAATCGTGGCA+TGG 0.616961 5_2:+45457116 Msa0771860:CDS
TGAATCAGATGGGTTAGTCG+TGG 0.624199 5_2:+45458569 Msa0771860:CDS
ATTGGAGATTATGATGGTGA+TGG 0.625170 5_2:+45458612 Msa0771860:CDS
CTTTGTCGTTTGCGCCGATG+TGG 0.625789 5_2:+45457481 Msa0771860:CDS
ATGACGCGTGGCGAGGTACG+CGG 0.626064 5_2:-45455899 None:intergenic
CACGATTATGACGCGTGGCG+AGG 0.626809 5_2:-45455906 None:intergenic
GAGCTATCAACACTGAGAAG+AGG 0.645148 5_2:-45457188 None:intergenic
GGGTATAAGCCTATTCCCAA+AGG 0.648713 5_2:+45458357 Msa0771860:CDS
GTGCCCTTATCTTCGAAATG+TGG 0.654369 5_2:-45457312 None:intergenic
GCAGACGAGTCATTACTCCC+CGG 0.679037 5_2:+45455775 Msa0771860:CDS
GCAAAAGAATCGCTGCCAAG+GGG 0.681579 5_2:-45457674 None:intergenic
ATGAGCACGATTATGACGCG+TGG 0.687791 5_2:-45455911 None:intergenic
CCAGTCAGCTCTAACCACAT+CGG 0.691053 5_2:-45457495 None:intergenic
TCTACTGATGATAACAATCG+TGG 0.698441 5_2:+45457111 Msa0771860:CDS
GTTAGTCGTGGATAAGTCCG+AGG 0.702927 5_2:+45458581 Msa0771860:CDS
CATTACCTGAAAGAAAGTGG+AGG 0.707669 5_2:-45455989 None:intergenic
GGCATCTTCCAAATTCAGGG+AGG 0.742143 5_2:+45457616 Msa0771860:CDS
CAACTTCTTTGTATACACCG+GGG 0.767528 5_2:-45455792 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCTTTTGTTAGTAATTTAA+TGG + chr5_2:45456371-45456390 Msa0771860:intron 15.0%
!!! TTTTGAAATGTTAATGATTT+AGG + chr5_2:45456908-45456927 Msa0771860:intron 15.0%
!!! TTTGAAATGTTAATGATTTA+GGG + chr5_2:45456909-45456928 Msa0771860:intron 15.0%
!!! ATTAATCTTCTAAAAAAACT+TGG - chr5_2:45457927-45457946 None:intergenic 15.0%
!! TTTATGCAATATATGAAGAA+AGG - chr5_2:45456310-45456329 None:intergenic 20.0%
!!! GTTTCTCTTATAGTTTTTTT+AGG - chr5_2:45456754-45456773 None:intergenic 20.0%
!! TTTCAAAATAGTAGCTAAAT+TGG - chr5_2:45456896-45456915 None:intergenic 20.0%
!!! TTTGAAGTCAATTGTATTTT+AGG + chr5_2:45457014-45457033 Msa0771860:intron 20.0%
!! AGAATTTCATTTCATATTGT+TGG + chr5_2:45457240-45457259 Msa0771860:CDS 20.0%
!! TCAATGATTACATAATTGTT+TGG + chr5_2:45458041-45458060 Msa0771860:intron 20.0%
!! ATGTTTGTGCATAATTTAAT+TGG + chr5_2:45458187-45458206 Msa0771860:intron 20.0%
!! ATTTAATTGGTTAAACTTTG+TGG + chr5_2:45458200-45458219 Msa0771860:intron 20.0%
!! TTTAATTGGTTAAACTTTGT+GGG + chr5_2:45458201-45458220 Msa0771860:intron 20.0%
!! ATTCAAAAGTTTATAGAGAA+GGG + chr5_2:45458708-45458727 Msa0771860:three_prime_UTR 20.0%
!!! AATGACATTTTGATCAATTT+TGG + chr5_2:45458772-45458791 Msa0771860:three_prime_UTR 20.0%
!! ATAAGTGAAAGATAAAACTA+TGG - chr5_2:45458858-45458877 None:intergenic 20.0%
!!! GATGGTTTAGAAATTTTGAT+GGG - chr5_2:45455631-45455650 None:intergenic 25.0%
!! TGATGGTTTAGAAATTTTGA+TGG - chr5_2:45455632-45455651 None:intergenic 25.0%
!!! TTATTTTTGGTTGATGGAAT+GGG - chr5_2:45455659-45455678 None:intergenic 25.0%
! ATGTAGTAAAGAGATTGATA+AGG + chr5_2:45456126-45456145 Msa0771860:intron 25.0%
! TGTAGTAAAGAGATTGATAA+GGG + chr5_2:45456127-45456146 Msa0771860:intron 25.0%
!! ACAAAAGATAAGCTTTTATG+TGG - chr5_2:45456360-45456379 None:intergenic 25.0%
! TACAATTTCAGGGATTAAAT+TGG + chr5_2:45456947-45456966 Msa0771860:intron 25.0%
! GGATTAATAAGCATTATAGT+TGG + chr5_2:45457261-45457280 Msa0771860:CDS 25.0%
! AATACATACTTATTTGTAGC+AGG - chr5_2:45457783-45457802 None:intergenic 25.0%
!! CGAATTTAGGATAATGAATT+GGG - chr5_2:45457852-45457871 None:intergenic 25.0%
!! ACGAATTTAGGATAATGAAT+TGG - chr5_2:45457853-45457872 None:intergenic 25.0%
! AAGCATTTGAAAAATGTTCA+TGG - chr5_2:45457894-45457913 None:intergenic 25.0%
!!! GAGTATTTTTGTTTACTTTG+TGG + chr5_2:45458080-45458099 Msa0771860:intron 25.0%
! AAGAAAATATATTGCTCTAC+AGG + chr5_2:45458652-45458671 Msa0771860:CDS 25.0%
! CATTCAAAAGTTTATAGAGA+AGG + chr5_2:45458707-45458726 Msa0771860:three_prime_UTR 25.0%
! ATGGTGAAAGATAAAAACTA+TGG - chr5_2:45458839-45458858 None:intergenic 25.0%
!!! AGTTTTATCTTTCACTTATG+AGG + chr5_2:45458859-45458878 Msa0771860:three_prime_UTR 25.0%
!! GTTTTATCTTTCACTTATGA+GGG + chr5_2:45458860-45458879 Msa0771860:three_prime_UTR 25.0%
! GATGACAATGTAAATTTGTA+TGG + chr5_2:45458931-45458950 Msa0771860:three_prime_UTR 25.0%
!!! TTTTGATGGGTTGAGAAATT+GGG - chr5_2:45455618-45455637 None:intergenic 30.0%
!!! ATTTTGATGGGTTGAGAAAT+TGG - chr5_2:45455619-45455638 None:intergenic 30.0%
!!! GTTATTTTTGGTTGATGGAA+TGG - chr5_2:45455660-45455679 None:intergenic 30.0%
!!! GTTGTGTTATTTTTGGTTGA+TGG - chr5_2:45455665-45455684 None:intergenic 30.0%
!!! CGTCTATGTTGTGTTATTTT+TGG - chr5_2:45455672-45455691 None:intergenic 30.0%
GTTTCTGATTTCATCTCATA+TGG - chr5_2:45455712-45455731 None:intergenic 30.0%
AAGAAGCTTGAACAATTGAT+CGG - chr5_2:45455867-45455886 None:intergenic 30.0%
! AAGAGATTGATAAGGGTATA+TGG + chr5_2:45456134-45456153 Msa0771860:intron 30.0%
AAGAAAGGAAAACCATAGAA+GGG - chr5_2:45456295-45456314 None:intergenic 30.0%
CCAAATTAACTTACGAAAGA+CGG + chr5_2:45456420-45456439 Msa0771860:intron 30.0%
ACATTAAAGAGAGAGAAAGT+TGG + chr5_2:45456592-45456611 Msa0771860:intron 30.0%
CATTAAAGAGAGAGAAAGTT+GGG + chr5_2:45456593-45456612 Msa0771860:intron 30.0%
ATTAAAGAGAGAGAAAGTTG+GGG + chr5_2:45456594-45456613 Msa0771860:intron 30.0%
! TCAACCATCTTTTCTACTAT+AGG - chr5_2:45456625-45456644 None:intergenic 30.0%
!!! ACTTTTTTGATAGACCACTA+TGG + chr5_2:45456801-45456820 Msa0771860:intron 30.0%
GATAAAGTTTGGTTGTTGTA+TGG + chr5_2:45456860-45456879 Msa0771860:intron 30.0%
AGTTGACATCTTACAATTTC+AGG + chr5_2:45456936-45456955 Msa0771860:intron 30.0%
GTTGACATCTTACAATTTCA+GGG + chr5_2:45456937-45456956 Msa0771860:intron 30.0%
!! AAAATGTTTCCTTTGGAACT+TGG - chr5_2:45457356-45457375 None:intergenic 30.0%
! AAGTTCCAAAGGAAACATTT+TGG + chr5_2:45457355-45457374 Msa0771860:CDS 30.0%
TAGGATAATGAATTGGGATT+GGG - chr5_2:45457846-45457865 None:intergenic 30.0%
TTAGGATAATGAATTGGGAT+TGG - chr5_2:45457847-45457866 None:intergenic 30.0%
GGAAACTACTAAACGAATTT+AGG - chr5_2:45457865-45457884 None:intergenic 30.0%
ACCAATTATGTGTGTACATA+TGG + chr5_2:45458112-45458131 Msa0771860:intron 30.0%
TCCATATGTACACACATAAT+TGG - chr5_2:45458116-45458135 None:intergenic 30.0%
! ATTTTGTCTCAGCATGTTTA+CGG + chr5_2:45458336-45458355 Msa0771860:CDS 30.0%
TTGTCTATTGGAGATTATGA+TGG + chr5_2:45458606-45458625 Msa0771860:CDS 30.0%
AAAATTTCGTGTTTGCTTAG+TGG + chr5_2:45458734-45458753 Msa0771860:three_prime_UTR 30.0%
GTTCTATTACAATCCATGTT+TGG - chr5_2:45458804-45458823 None:intergenic 30.0%
TTGTGTACAGTGTTATACAT+AGG + chr5_2:45458909-45458928 Msa0771860:three_prime_UTR 30.0%
CAATGTAAATTTGTATGGTC+TGG + chr5_2:45458936-45458955 Msa0771860:three_prime_UTR 30.0%
! TTGATGGAATGGGATTTTGA+TGG - chr5_2:45455649-45455668 None:intergenic 35.0%
!!! CTTGTTTTAGTGAATCTAGC+TGG + chr5_2:45455739-45455758 Msa0771860:CDS 35.0%
AGTGAATCTAGCTGGAATAA+TGG + chr5_2:45455747-45455766 Msa0771860:CDS 35.0%
ACCAACTTCTTTGTATACAC+CGG - chr5_2:45455797-45455816 None:intergenic 35.0%
ATGCATTACCTGAAAGAAAG+TGG - chr5_2:45455995-45456014 None:intergenic 35.0%
AAGATTGGAGTGAACCATTA+TGG + chr5_2:45456204-45456223 Msa0771860:intron 35.0%
TTGAGTTTCTTTCCCTTCTA+TGG + chr5_2:45456280-45456299 Msa0771860:intron 35.0%
GAAGAAAGGAAAACCATAGA+AGG - chr5_2:45456296-45456315 None:intergenic 35.0%
CCGTCTTTCGTAAGTTAATT+TGG - chr5_2:45456423-45456442 None:intergenic 35.0%
! TTTTGGTACTTCATTGTGTG+AGG - chr5_2:45456531-45456550 None:intergenic 35.0%
! CACACAATGAAGTACCAAAA+TGG + chr5_2:45456531-45456550 Msa0771860:intron 35.0%
! GAGAAAGTAGACAACCATTT+TGG - chr5_2:45456548-45456567 None:intergenic 35.0%
TGTCTACTTTCTCAGTAGTA+TGG + chr5_2:45456555-45456574 Msa0771860:intron 35.0%
CAGTAGTATGGTTGAGAAAA+AGG + chr5_2:45456567-45456586 Msa0771860:intron 35.0%
AGCACCTATAGTAGAAAAGA+TGG + chr5_2:45456618-45456637 Msa0771860:intron 35.0%
AGATGGTTGAAACTAGACTT+AGG + chr5_2:45456635-45456654 Msa0771860:intron 35.0%
AAACTAGACTTAGGTGGTTT+GGG + chr5_2:45456644-45456663 Msa0771860:intron 35.0%
AAACTTTATCCCACTAAGTG+AGG - chr5_2:45456850-45456869 None:intergenic 35.0%
TCACTTAGTGGGATAAAGTT+TGG + chr5_2:45456849-45456868 Msa0771860:intron 35.0%
TCTACTGATGATAACAATCG+TGG + chr5_2:45457111-45457130 Msa0771860:CDS 35.0%
CTTCAACTAACTGGAAATCT+CGG + chr5_2:45457150-45457169 Msa0771860:CDS 35.0%
ATAGCTCCAATAACAGTCTT+TGG + chr5_2:45457204-45457223 Msa0771860:CDS 35.0%
ATCTTCGAAATGTGGATCTT+TGG - chr5_2:45457307-45457326 None:intergenic 35.0%
AGATCCACATTTCGAAGATA+AGG + chr5_2:45457308-45457327 Msa0771860:CDS 35.0%
GATCCACATTTCGAAGATAA+GGG + chr5_2:45457309-45457328 Msa0771860:CDS 35.0%
! TGGAGTAAGAGATTTGTTTC+AGG + chr5_2:45457380-45457399 Msa0771860:CDS 35.0%
TTTGTTTCAGGAAGCCAAAT+CGG + chr5_2:45457392-45457411 Msa0771860:CDS 35.0%
TTTCCAGATAATTGTTGCAC+AGG + chr5_2:45457431-45457450 Msa0771860:CDS 35.0%
TTCCAGATAATTGTTGCACA+GGG + chr5_2:45457432-45457451 Msa0771860:CDS 35.0%
!! TTTCCTCATAGCTTTGTTTG+TGG + chr5_2:45457539-45457558 Msa0771860:CDS 35.0%
AGAATTATCCTCCCTGAATT+TGG - chr5_2:45457627-45457646 None:intergenic 35.0%
!! TGGTTTGATGCTTGTCATTT+TGG + chr5_2:45457734-45457753 Msa0771860:CDS 35.0%
!!! GGTTTGATGCTTGTCATTTT+GGG + chr5_2:45457735-45457754 Msa0771860:CDS 35.0%
!!! GTTTGATGCTTGTCATTTTG+GGG + chr5_2:45457736-45457755 Msa0771860:CDS 35.0%
!!! TTTTGGGGCTCTTTATATCT+TGG + chr5_2:45457751-45457770 Msa0771860:CDS 35.0%
GAAAAATGTTCATGGCAAGT+TGG - chr5_2:45457886-45457905 None:intergenic 35.0%
! CAATGCTTGTTGCAATACAT+TGG + chr5_2:45457967-45457986 Msa0771860:intron 35.0%
AAATGAAGCATACAGCTATG+TGG + chr5_2:45458138-45458157 Msa0771860:intron 35.0%
GGAACTATCTCTGCAAAAAT+TGG - chr5_2:45458234-45458253 None:intergenic 35.0%
CAAGTGTGTATGCATTAGAT+CGG + chr5_2:45458268-45458287 Msa0771860:CDS 35.0%
! TTTTGTCTCAGCATGTTTAC+GGG + chr5_2:45458337-45458356 Msa0771860:CDS 35.0%
TGAGATGCACTATATCCTTT+GGG - chr5_2:45458375-45458394 None:intergenic 35.0%
TTGAGATGCACTATATCCTT+TGG - chr5_2:45458376-45458395 None:intergenic 35.0%
AAGTCTCTTTACACAGCAAT+AGG + chr5_2:45458435-45458454 Msa0771860:CDS 35.0%
ATTAAACAGCATAGAGCCAT+TGG - chr5_2:45458465-45458484 None:intergenic 35.0%
! GATGGAGGCTTTAATAGAAT+CGG + chr5_2:45458533-45458552 Msa0771860:CDS 35.0%
ATGCAGCATATTGAATCAGA+TGG + chr5_2:45458558-45458577 Msa0771860:CDS 35.0%
TGCAGCATATTGAATCAGAT+GGG + chr5_2:45458559-45458578 Msa0771860:CDS 35.0%
ATCTCCAATAGACAATTCCT+CGG - chr5_2:45458601-45458620 None:intergenic 35.0%
! ATTGGAGATTATGATGGTGA+TGG + chr5_2:45458612-45458631 Msa0771860:CDS 35.0%
ATTCTCCAACTTAGCTGATT+AGG + chr5_2:45458683-45458702 Msa0771860:CDS 35.0%
AATGACCTAATCAGCTAAGT+TGG - chr5_2:45458691-45458710 None:intergenic 35.0%
!! ATTTTGGCATCAACCAAACA+TGG + chr5_2:45458788-45458807 Msa0771860:three_prime_UTR 35.0%
TTATCTTTCACTTATGAGGG+AGG + chr5_2:45458863-45458882 Msa0771860:three_prime_UTR 35.0%
GGTTGAGAAATTGGGAGTTT+GGG - chr5_2:45455610-45455629 None:intergenic 40.0%
CAACTTCTTTGTATACACCG+GGG - chr5_2:45455795-45455814 None:intergenic 40.0%
CCAACTTCTTTGTATACACC+GGG - chr5_2:45455796-45455815 None:intergenic 40.0%
!!! TTGCTCTTGGTGCTTTTCTT+TGG + chr5_2:45455938-45455957 Msa0771860:CDS 40.0%
!!! TGCTCTTGGTGCTTTTCTTT+GGG + chr5_2:45455939-45455958 Msa0771860:CDS 40.0%
CATTACCTGAAAGAAAGTGG+AGG - chr5_2:45455992-45456011 None:intergenic 40.0%
GGTCAATAGTATAGAACGTG+AGG + chr5_2:45456155-45456174 Msa0771860:intron 40.0%
! TGATGGTGATCCAAGAAGAT+TGG + chr5_2:45456189-45456208 Msa0771860:intron 40.0%
ATGGTTCACTCCAATCTTCT+TGG - chr5_2:45456202-45456221 None:intergenic 40.0%
TGGAGTGAACCATTATGGTT+AGG + chr5_2:45456209-45456228 Msa0771860:intron 40.0%
AGAGTTCTATCCTTCTCCAA+AGG + chr5_2:45456239-45456258 Msa0771860:intron 40.0%
GAGTTCTATCCTTCTCCAAA+GGG + chr5_2:45456240-45456259 Msa0771860:intron 40.0%
TACCATAGAGTCAATCCCTT+TGG - chr5_2:45456258-45456277 None:intergenic 40.0%
GCATCTCATGCTATTCACTT+TGG - chr5_2:45456456-45456475 None:intergenic 40.0%
TGAATAGCATGAGATGCACT+TGG + chr5_2:45456459-45456478 Msa0771860:intron 40.0%
GAATAGCATGAGATGCACTT+GGG + chr5_2:45456460-45456479 Msa0771860:intron 40.0%
TGGTTGAAACTAGACTTAGG+TGG + chr5_2:45456638-45456657 Msa0771860:intron 40.0%
GAAACTAGACTTAGGTGGTT+TGG + chr5_2:45456643-45456662 Msa0771860:intron 40.0%
! AGTAAGGAGAGTTGATCAGA+TGG + chr5_2:45456696-45456715 Msa0771860:intron 40.0%
AAATCACTGGTGGTAGAGAA+AGG + chr5_2:45456728-45456747 Msa0771860:intron 40.0%
TTTATCCCACTAAGTGAGGT+CGG - chr5_2:45456846-45456865 None:intergenic 40.0%
CAGTTTCGCGAGGATTAAAT+GGG + chr5_2:45457040-45457059 Msa0771860:CDS 40.0%
ATCAGTAGAGTCTGCAACTA+AGG - chr5_2:45457100-45457119 None:intergenic 40.0%
TGATGATAACAATCGTGGCA+TGG + chr5_2:45457116-45457135 Msa0771860:CDS 40.0%
TTTGGATGGCTTCAACTAAC+TGG + chr5_2:45457141-45457160 Msa0771860:CDS 40.0%
GCGATACCAAAGACTGTTAT+TGG - chr5_2:45457213-45457232 None:intergenic 40.0%
ATAACAGTCTTTGGTATCGC+TGG + chr5_2:45457213-45457232 Msa0771860:CDS 40.0%
AGATAGCAACCAAGTTCCAA+AGG + chr5_2:45457344-45457363 Msa0771860:CDS 40.0%
CCAGACCAAAATGTTTCCTT+TGG - chr5_2:45457363-45457382 None:intergenic 40.0%
!! CCAAAGGAAACATTTTGGTC+TGG + chr5_2:45457360-45457379 Msa0771860:CDS 40.0%
CGAAATCCTAGTAACCGATT+TGG - chr5_2:45457409-45457428 None:intergenic 40.0%
CAACCACAAACAAAGCTATG+AGG - chr5_2:45457545-45457564 None:intergenic 40.0%
TTTGTGGTTGCAAGTTCTGT+TGG + chr5_2:45457555-45457574 Msa0771860:CDS 40.0%
! GGTTTGTTTGGTGGTAAGAT+GGG + chr5_2:45457579-45457598 Msa0771860:CDS 40.0%
AATTTGGAAGATGCCTGGAA+AGG - chr5_2:45457611-45457630 None:intergenic 40.0%
ATTCTAGCACAGATAAGCTC+TGG + chr5_2:45457642-45457661 Msa0771860:CDS 40.0%
AATGCTGTAGATGGATCATC+TGG - chr5_2:45457708-45457727 None:intergenic 40.0%
GGGCTCTTTATATCTTGGAA+TGG + chr5_2:45457756-45457775 Msa0771860:CDS 40.0%
! TGCTTGTTGCAATACATTGG+TGG + chr5_2:45457970-45457989 Msa0771860:intron 40.0%
TAATGCATACACACTTGTCC+GGG - chr5_2:45458265-45458284 None:intergenic 40.0%
CTAATGCATACACACTTGTC+CGG - chr5_2:45458266-45458285 None:intergenic 40.0%
! GCACTATATCCTTTGGGAAT+AGG - chr5_2:45458369-45458388 None:intergenic 40.0%
! CCAATGATGAAGCATTCTCT+CGG - chr5_2:45458413-45458432 None:intergenic 40.0%
CACAGCAATAGGAATTCCAA+TGG + chr5_2:45458446-45458465 Msa0771860:CDS 40.0%
AAGTCCGAGGAATTGTCTAT+TGG + chr5_2:45458594-45458613 Msa0771860:CDS 40.0%
ATTTCGTGTTTGCTTAGTGG+TGG + chr5_2:45458737-45458756 Msa0771860:three_prime_UTR 40.0%
GGGTTGAGAAATTGGGAGTT+TGG - chr5_2:45455611-45455630 None:intergenic 45.0%
CCCGGTGTATACAAAGAAGT+TGG + chr5_2:45455793-45455812 Msa0771860:CDS 45.0%
CGTGCTCATGTTATTGCTCT+TGG + chr5_2:45455925-45455944 Msa0771860:CDS 45.0%
CTGAAAGAAAGTGGAGGAGA+AGG - chr5_2:45455986-45456005 None:intergenic 45.0%
CTTCTCCTCCACTTTCTTTC+AGG + chr5_2:45455984-45456003 Msa0771860:CDS 45.0%
TGTGATTGAGACCCAAGTGA+GGG + chr5_2:45456081-45456100 Msa0771860:intron 45.0%
TGAGGGCTGATAAGGGAAAA+GGG + chr5_2:45456098-45456117 Msa0771860:intron 45.0%
AGTATAGAACGTGAGGTGTG+TGG + chr5_2:45456162-45456181 Msa0771860:intron 45.0%
CTCTATGCGCCTAACCATAA+TGG - chr5_2:45456221-45456240 None:intergenic 45.0%
! AGAGTCAATCCCTTTGGAGA+AGG - chr5_2:45456252-45456271 None:intergenic 45.0%
! CTCCAAAGGGATTGACTCTA+TGG + chr5_2:45456253-45456272 Msa0771860:intron 45.0%
!! GCACTTGGGCATGTTTTTGT+AGG + chr5_2:45456474-45456493 Msa0771860:intron 45.0%
! AGGCACTGTCACAATAGTCT+CGG - chr5_2:45456511-45456530 None:intergenic 45.0%
GACCTGTGGATTCTGTAGTA+AGG + chr5_2:45456680-45456699 Msa0771860:intron 45.0%
CTCCTTACTACAGAATCCAC+AGG - chr5_2:45456685-45456704 None:intergenic 45.0%
! AAGGAGAGTTGATCAGATGG+AGG + chr5_2:45456699-45456718 Msa0771860:intron 45.0%
! AGGAGAGTTGATCAGATGGA+GGG + chr5_2:45456700-45456719 Msa0771860:intron 45.0%
TGAATCAAACGACGCCATAG+TGG - chr5_2:45456818-45456837 None:intergenic 45.0%
ATGTATCCGACCTCACTTAG+TGG + chr5_2:45456837-45456856 Msa0771860:intron 45.0%
TGTATCCGACCTCACTTAGT+GGG + chr5_2:45456838-45456857 Msa0771860:intron 45.0%
!! TTTTAGGTAGCAGTTTCGCG+AGG + chr5_2:45457030-45457049 Msa0771860:intron 45.0%
GCAGTTTCGCGAGGATTAAA+TGG + chr5_2:45457039-45457058 Msa0771860:CDS 45.0%
TCGCGAGGATTAAATGGGAT+TGG + chr5_2:45457045-45457064 Msa0771860:CDS 45.0%
GCAACTAAGGACTGAATTGC+AGG - chr5_2:45457087-45457106 None:intergenic 45.0%
! AACAATCGTGGCATGGCTTT+TGG + chr5_2:45457123-45457142 Msa0771860:CDS 45.0%
GGAAATCTCGGTTCAGTTGT+TGG + chr5_2:45457162-45457181 Msa0771860:CDS 45.0%
AATCTCGGTTCAGTTGTTGG+TGG + chr5_2:45457165-45457184 Msa0771860:CDS 45.0%
GAGCTATCAACACTGAGAAG+AGG - chr5_2:45457191-45457210 None:intergenic 45.0%
GTGCCCTTATCTTCGAAATG+TGG - chr5_2:45457315-45457334 None:intergenic 45.0%
AGGAAGCCAAATCGGTTACT+AGG + chr5_2:45457400-45457419 Msa0771860:CDS 45.0%
CACCCTGTGCAACAATTATC+TGG - chr5_2:45457437-45457456 None:intergenic 45.0%
! ATTGTTGCACAGGGTGTTAC+TGG + chr5_2:45457441-45457460 Msa0771860:CDS 45.0%
! AGTTCTGTTGGCGGTTTGTT+TGG + chr5_2:45457567-45457586 Msa0771860:CDS 45.0%
! CGGTTTGTTTGGTGGTAAGA+TGG + chr5_2:45457578-45457597 Msa0771860:CDS 45.0%
AGATGGGAGATATCCTTTCC+AGG + chr5_2:45457595-45457614 Msa0771860:CDS 45.0%
TCCAGGCATCTTCCAAATTC+AGG + chr5_2:45457612-45457631 Msa0771860:CDS 45.0%
CCAGGCATCTTCCAAATTCA+GGG + chr5_2:45457613-45457632 Msa0771860:CDS 45.0%
AGCAAAAGAATCGCTGCCAA+GGG - chr5_2:45457678-45457697 None:intergenic 45.0%
! TTGGCAGCGATTCTTTTGCT+GGG + chr5_2:45457678-45457697 Msa0771860:CDS 45.0%
CCATGTGACAATGCTGTAGA+TGG - chr5_2:45457717-45457736 None:intergenic 45.0%
CCATCTACAGCATTGTCACA+TGG + chr5_2:45457714-45457733 Msa0771860:CDS 45.0%
AGATAGTTCCAGAGAGATCC+CGG + chr5_2:45458244-45458263 Msa0771860:CDS 45.0%
TGAGACAAAATTCCCACTGC+AGG - chr5_2:45458327-45458346 None:intergenic 45.0%
GGGTATAAGCCTATTCCCAA+AGG + chr5_2:45458357-45458376 Msa0771860:CDS 45.0%
CCGAGAGAATGCTTCATCAT+TGG + chr5_2:45458410-45458429 Msa0771860:CDS 45.0%
TCTTTCTCTGTCTCTCGGAT+AGG - chr5_2:45458508-45458527 None:intergenic 45.0%
! CTAGCTCTTTCTCTGTCTCT+CGG - chr5_2:45458513-45458532 None:intergenic 45.0%
AGACAGAGAAAGAGCTAGGA+TGG + chr5_2:45458515-45458534 Msa0771860:CDS 45.0%
!! TGAATCAGATGGGTTAGTCG+TGG + chr5_2:45458569-45458588 Msa0771860:CDS 45.0%
! GGGAGTTTGGGACTTTGACT+GGG - chr5_2:45455598-45455617 None:intergenic 50.0%
! TGGGAGTTTGGGACTTTGAC+TGG - chr5_2:45455599-45455618 None:intergenic 50.0%
GCTCTTCATACTGACCCTAC+AGG + chr5_2:45455820-45455839 Msa0771860:CDS 50.0%
CATACTGACCCTACAGGACT+CGG + chr5_2:45455826-45455845 Msa0771860:CDS 50.0%
TAAGCGAACCGAGTCCTGTA+GGG - chr5_2:45455837-45455856 None:intergenic 50.0%
ATGAGCACGATTATGACGCG+TGG - chr5_2:45455914-45455933 None:intergenic 50.0%
GTGTGATTGAGACCCAAGTG+AGG + chr5_2:45456080-45456099 Msa0771860:intron 50.0%
ACCCAAGTGAGGGCTGATAA+GGG + chr5_2:45456091-45456110 Msa0771860:intron 50.0%
TCCCTTATCAGCCCTCACTT+GGG - chr5_2:45456095-45456114 None:intergenic 50.0%
TTCCCTTATCAGCCCTCACT+TGG - chr5_2:45456096-45456115 None:intergenic 50.0%
GTGAGGGCTGATAAGGGAAA+AGG + chr5_2:45456097-45456116 Msa0771860:intron 50.0%
GAGGGCTGATAAGGGAAAAG+GGG + chr5_2:45456099-45456118 Msa0771860:intron 50.0%
! GTGAGGTGTGTGGATTGTGA+TGG + chr5_2:45456172-45456191 Msa0771860:intron 50.0%
GCATGTAGAGAGAAGACCTG+TGG + chr5_2:45456666-45456685 Msa0771860:intron 50.0%
! GGAGAGTTGATCAGATGGAG+GGG + chr5_2:45456701-45456720 Msa0771860:intron 50.0%
ATGGAGGGGACTCAAATCAC+TGG + chr5_2:45456715-45456734 Msa0771860:intron 50.0%
! ATCGTGGCATGGCTTTTGGA+TGG + chr5_2:45457127-45457146 Msa0771860:CDS 50.0%
CAGTCTTTGGTATCGCTGGT+TGG + chr5_2:45457217-45457236 Msa0771860:CDS 50.0%
!! GTGTTACTGGCTCCTTTCCT+TGG + chr5_2:45457454-45457473 Msa0771860:CDS 50.0%
!! TACTGGCTCCTTTCCTTGGT+CGG + chr5_2:45457458-45457477 Msa0771860:CDS 50.0%
! CCAGTCAGCTCTAACCACAT+CGG - chr5_2:45457498-45457517 None:intergenic 50.0%
GTGGTTGCAAGTTCTGTTGG+CGG + chr5_2:45457558-45457577 Msa0771860:CDS 50.0%
! TCTGTTGGCGGTTTGTTTGG+TGG + chr5_2:45457570-45457589 Msa0771860:CDS 50.0%
CCCTGAATTTGGAAGATGCC+TGG - chr5_2:45457616-45457635 None:intergenic 50.0%
GGCATCTTCCAAATTCAGGG+AGG + chr5_2:45457616-45457635 Msa0771860:CDS 50.0%
GCAAAAGAATCGCTGCCAAG+GGG - chr5_2:45457677-45457696 None:intergenic 50.0%
CAGCAAAAGAATCGCTGCCA+AGG - chr5_2:45457679-45457698 None:intergenic 50.0%
! CTTGGCAGCGATTCTTTTGC+TGG + chr5_2:45457677-45457696 Msa0771860:CDS 50.0%
! ATCTTTTGCTCCTCCTGCAG+TGG + chr5_2:45458311-45458330 Msa0771860:CDS 50.0%
! TCTTTTGCTCCTCCTGCAGT+GGG + chr5_2:45458312-45458331 Msa0771860:CDS 50.0%
GACAAAATTCCCACTGCAGG+AGG - chr5_2:45458324-45458343 None:intergenic 50.0%
CGAGAGACAGAGAAAGAGCT+AGG + chr5_2:45458511-45458530 Msa0771860:CDS 50.0%
CAGAGAAAGAGCTAGGATGG+AGG + chr5_2:45458518-45458537 Msa0771860:CDS 50.0%
GTTAGTCGTGGATAAGTCCG+AGG + chr5_2:45458581-45458600 Msa0771860:CDS 50.0%
GCAGACGAGTCATTACTCCC+CGG + chr5_2:45455775-45455794 Msa0771860:CDS 55.0%
GTAAGCGAACCGAGTCCTGT+AGG - chr5_2:45455838-45455857 None:intergenic 55.0%
GACCCAAGTGAGGGCTGATA+AGG + chr5_2:45456090-45456109 Msa0771860:intron 55.0%
GAGGGGACTCAAATCACTGG+TGG + chr5_2:45456718-45456737 Msa0771860:intron 55.0%
CGACAAAGCCGACCAAGGAA+AGG - chr5_2:45457469-45457488 None:intergenic 55.0%
GCAAACGACAAAGCCGACCA+AGG - chr5_2:45457474-45457493 None:intergenic 55.0%
! CTTTGTCGTTTGCGCCGATG+TGG + chr5_2:45457481-45457500 Msa0771860:CDS 55.0%
CCGATGTGGTTAGAGCTGAC+TGG + chr5_2:45457495-45457514 Msa0771860:CDS 55.0%
ACACTTGTCCGGGATCTCTC+TGG - chr5_2:45458255-45458274 None:intergenic 55.0%
TGGCGAGGTACGCGGCAATT+GGG - chr5_2:45455894-45455913 None:intergenic 60.0%
CACGATTATGACGCGTGGCG+AGG - chr5_2:45455909-45455928 None:intergenic 60.0%
AATCGCTGCCAAGGGGATCG+CGG - chr5_2:45457670-45457689 None:intergenic 60.0%
GTGGCGAGGTACGCGGCAAT+TGG - chr5_2:45455895-45455914 None:intergenic 65.0%
ATGACGCGTGGCGAGGTACG+CGG - chr5_2:45455902-45455921 None:intergenic 65.0%
CTCTGGATCCGCGATCCCCT+TGG + chr5_2:45457659-45457678 Msa0771860:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 45455593 45458959 45455593 ID=Msa0771860;Name=Msa0771860
chr5_2 mRNA 45455593 45458959 45455593 ID=Msa0771860-mRNA-1;Parent=Msa0771860;Name=Msa0771860-mRNA-1;_AED=0.01;_eAED=0.01;_QI=125|1|1|1|1|1|3|255|506
chr5_2 exon 45455593 45456005 45455593 ID=Msa0771860-mRNA-1:exon:13712;Parent=Msa0771860-mRNA-1
chr5_2 exon 45457036 45457793 45457036 ID=Msa0771860-mRNA-1:exon:13713;Parent=Msa0771860-mRNA-1
chr5_2 exon 45458230 45458959 45458230 ID=Msa0771860-mRNA-1:exon:13714;Parent=Msa0771860-mRNA-1
chr5_2 five_prime_UTR 45455593 45455717 45455593 ID=Msa0771860-mRNA-1:five_prime_utr;Parent=Msa0771860-mRNA-1
chr5_2 CDS 45455718 45456005 45455718 ID=Msa0771860-mRNA-1:cds;Parent=Msa0771860-mRNA-1
chr5_2 CDS 45457036 45457793 45457036 ID=Msa0771860-mRNA-1:cds;Parent=Msa0771860-mRNA-1
chr5_2 CDS 45458230 45458704 45458230 ID=Msa0771860-mRNA-1:cds;Parent=Msa0771860-mRNA-1
chr5_2 three_prime_UTR 45458705 45458959 45458705 ID=Msa0771860-mRNA-1:three_prime_utr;Parent=Msa0771860-mRNA-1
Gene Sequence

>Msa0771860

ATGAAATCAGAAACATTAACACTTGTTTTAGTGAATCTAGCTGGAATAATGGAAAAAGCAGACGAGTCATTACTCCCCGGTGTATACAAAGAAGTTGGTGCTGCTCTTCATACTGACCCTACAGGACTCGGTTCGCTTACTCTCTTCCGATCAATTGTTCAAGCTTCTTGTTACCCAATTGCCGCGTACCTCGCCACGCGTCATAATCGTGCTCATGTTATTGCTCTTGGTGCTTTTCTTTGGGCTGCTGCTACTTTTCTTGTTGCCTTCTCCTCCACTTTCTTTCAGGTAGCAGTTTCGCGAGGATTAAATGGGATTGGTCTTGCGCTTGTAACTCCTGCAATTCAGTCCTTAGTTGCAGACTCTACTGATGATAACAATCGTGGCATGGCTTTTGGATGGCTTCAACTAACTGGAAATCTCGGTTCAGTTGTTGGTGGCCTCTTCTCAGTGTTGATAGCTCCAATAACAGTCTTTGGTATCGCTGGTTGGAGAATTTCATTTCATATTGTTGGATTAATAAGCATTATAGTTGGCACTTTAGTTTACATCTTTGCCAAAGATCCACATTTCGAAGATAAGGGCACGCTTGCAAAAGATAGCAACCAAGTTCCAAAGGAAACATTTTGGTCTGGAGTAAGAGATTTGTTTCAGGAAGCCAAATCGGTTACTAGGATTTCGTCTTTCCAGATAATTGTTGCACAGGGTGTTACTGGCTCCTTTCCTTGGTCGGCTTTGTCGTTTGCGCCGATGTGGTTAGAGCTGACTGGCTTTTCACATGCAAAAACTGCTTTCCTCATAGCTTTGTTTGTGGTTGCAAGTTCTGTTGGCGGTTTGTTTGGTGGTAAGATGGGAGATATCCTTTCCAGGCATCTTCCAAATTCAGGGAGGATAATTCTAGCACAGATAAGCTCTGGATCCGCGATCCCCTTGGCAGCGATTCTTTTGCTGGGTTTACCAGATGATCCATCTACAGCATTGTCACATGGTTTGATGCTTGTCATTTTGGGGCTCTTTATATCTTGGAATGGTCCTGCTACAAATAATCCAATTTTTGCAGAGATAGTTCCAGAGAGATCCCGGACAAGTGTGTATGCATTAGATCGGTCTTTTGAGTCTATACTATCATCTTTTGCTCCTCCTGCAGTGGGAATTTTGTCTCAGCATGTTTACGGGTATAAGCCTATTCCCAAAGGATATAGTGCATCTCAAGAGAGTTTAACAGACCGAGAGAATGCTTCATCATTGGCAAAGTCTCTTTACACAGCAATAGGAATTCCAATGGCTCTATGCTGTTTAATCTATTCATTTCTTTATAAGACCTATCCGAGAGACAGAGAAAGAGCTAGGATGGAGGCTTTAATAGAATCGGAGATGCAGCATATTGAATCAGATGGGTTAGTCGTGGATAAGTCCGAGGAATTGTCTATTGGAGATTATGATGGTGATGGTGCTGATCTTGATGATGAAGAAAATATATTGCTCTACAGGCAGTTGACATTCTCCAACTTAGCTGATTAG

Protein sequence

>Msa0771860

MKSETLTLVLVNLAGIMEKADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLATRHNRAHVIALGAFLWAAATFLVAFSSTFFQVAVSRGLNGIGLALVTPAIQSLVADSTDDNNRGMAFGWLQLTGNLGSVVGGLFSVLIAPITVFGIAGWRISFHIVGLISIIVGTLVYIFAKDPHFEDKGTLAKDSNQVPKETFWSGVRDLFQEAKSVTRISSFQIIVAQGVTGSFPWSALSFAPMWLELTGFSHAKTAFLIALFVVASSVGGLFGGKMGDILSRHLPNSGRIILAQISSGSAIPLAAILLLGLPDDPSTALSHGLMLVILGLFISWNGPATNNPIFAEIVPERSRTSVYALDRSFESILSSFAPPAVGILSQHVYGYKPIPKGYSASQESLTDRENASSLAKSLYTAIGIPMALCCLIYSFLYKTYPRDRERARMEALIESEMQHIESDGLVVDKSEELSIGDYDGDGADLDDEENILLYRQLTFSNLAD*