AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0591300


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0591300 MtrunA17_CPg0492421 77.686 121 22 2 120 238 40 157 2.17e-60 187
Msa0591300 MtrunA17_Chr4g0016101 77.686 121 22 2 120 238 40 157 2.17e-60 187
Msa0591300 MtrunA17_Chr3g0090841 77.686 121 22 2 120 238 40 157 2.17e-60 187
Msa0591300 MtrunA17_Chr4g0057401 87.500 40 5 0 199 238 1 40 1.21e-16 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0591300 ATCG00900.1 84.874 119 15 1 120 238 40 155 2.68e-67 205
Msa0591300 ATCG01240.1 84.874 119 15 1 120 238 40 155 2.68e-67 205
Msa0591300 ATCG00905.1 57.143 56 22 1 82 137 21 74 2.45e-12 61.6
Msa0591300 ATCG01230.1 57.143 56 22 1 82 137 21 74 2.45e-12 61.6
Msa0591300 ATMG01270.1 32.710 107 63 2 138 238 43 146 8.85e-12 61.6
Msa0591300 AT2G07696.1 32.710 107 63 2 138 238 43 146 8.85e-12 61.6

Find 81 sgRNAs with CRISPR-Local

Find 338 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGAAACAATGACGGTATC+TGG 0.216678 4_2:-15589897 Msa0591280:intron
CTTGCCATTCGTTGGTTATT+AGG 0.268444 4_2:+15592785 Msa0591300:CDS
CGCTTTACGCCCAATCATTC+CGG 0.287091 4_2:+15589813 Msa0591300:CDS
CATCAAGTTCCCGTTGAAAT+AGG 0.307921 4_2:+15592743 Msa0591300:CDS
AAAACGTCCAGGTCGAAATA+TGG 0.317789 4_2:+15592817 Msa0591300:CDS
TCCTTTCGCTCCTCAGCTTA+CGG 0.318574 4_2:+15590154 Msa0591300:CDS
ATCAGACGCGAGCCCCTCCT+TGG 0.323688 4_2:+15590122 Msa0591300:CDS
CTCTGTCTTACCGCGGCTGC+TGG 0.335301 4_2:+15589850 Msa0591300:CDS
CCTTTCGCTCCTCAGCTTAC+GGG 0.341229 4_2:+15590155 Msa0591300:CDS
CAAATTAAGTTCCGAATTAG+TGG 0.342047 4_2:+15592844 Msa0591300:CDS
CAAGCGTTATCCGGAATGAT+TGG 0.365557 4_2:-15589823 Msa0591280:intron
TGGCGATGCCATACGCAAAA+AGG 0.366109 4_2:+15592883 Msa0591300:CDS
CCTTTACTCCGACAGCATCT+AGG 0.372692 4_2:-15592371 Msa0591280:five_prime_UTR
ACCGTCATTGTTTCTTCTCC+AGG 0.384151 4_2:+15589903 Msa0591300:CDS
CAGCTGTTGTTCCCCTCCCA+AGG 0.401225 4_2:+15590195 Msa0591300:CDS
TTTGGCAGCATCCACTAATT+CGG 0.404543 4_2:-15592855 None:intergenic
CATATTTAGAACGACCTTGT+TGG 0.411865 4_2:-15592398 Msa0591280:five_prime_UTR
GCTTGACGTAAAACAGATAG+TGG 0.426676 4_2:-15592662 None:intergenic
GTAAAAGCAAGACGCGTAAA+CGG 0.427761 4_2:+15592713 Msa0591300:CDS
TATGGCATCGCCATTCCCTT+TGG 0.436234 4_2:-15592873 None:intergenic
CATTCTGTAGTCTTAGTAAG+AGG 0.441296 4_2:+15592298 Msa0591300:intron
CAGAGGATGCAAGCGTTATC+CGG 0.442617 4_2:-15589832 Msa0591280:intron
GGTTGAGCCCTGGGATTTGA+CGG 0.443812 4_2:+15589766 None:intergenic
CTTGGGAGGGGAACAACAGC+TGG 0.448224 4_2:-15590194 Msa0591280:intron
CTCGCGTCTGATTAGCTAGT+TGG 0.450357 4_2:-15590111 Msa0591280:intron
GTTGTTCCCCTCCCAAGGGC+AGG 0.453286 4_2:+15590200 Msa0591300:CDS
TCAGACGCGAGCCCCTCCTT+GGG 0.455699 4_2:+15590123 Msa0591300:CDS
TAAGTTCGCCGTCAAATCCC+AGG 0.467544 4_2:-15589774 Msa0591280:intron
TGTGTGGATCCTATTTCAAC+GGG 0.470768 4_2:-15592752 None:intergenic
TAAGAACCTGCCCTTGGGAG+GGG 0.474163 4_2:-15590206 Msa0591280:intron
AGGGGAACAACAGCTGGAAA+CGG 0.479232 4_2:-15590188 Msa0591280:intron
AACGCGTAAGAACCTGCCCT+TGG 0.497667 4_2:-15590212 Msa0591280:intron
AGGAGGAATCCGCCCAAGGA+GGG 0.502243 4_2:-15590135 Msa0591280:intron
CTTTACTCCGACAGCATCTA+GGG 0.502834 4_2:-15592370 Msa0591280:five_prime_UTR
CCTAGATGCTGTCGGAGTAA+AGG 0.506750 4_2:+15592371 Msa0591300:CDS
AAGCGTTATCCGGAATGATT+GGG 0.511219 4_2:-15589822 Msa0591280:intron
AAGAAACAATGACGGTATCT+GGG 0.514487 4_2:-15589896 Msa0591280:intron
GAAAAGCACTTGCCATTCGT+TGG 0.526859 4_2:+15592777 Msa0591300:CDS
ACGCGTAAGAACCTGCCCTT+GGG 0.530469 4_2:-15590211 Msa0591280:intron
GTGGATGCTGCCAAAGGGAA+TGG 0.532446 4_2:+15592863 Msa0591300:CDS
AGCTGTTGTTCCCCTCCCAA+GGG 0.533909 4_2:+15590196 Msa0591300:CDS
GGCGCATCCCGAAAACGTCC+AGG 0.540732 4_2:+15592806 Msa0591300:CDS
TAACTCTGTGCCAGCAGCCG+CGG 0.544469 4_2:-15589860 Msa0591280:intron
AAAGGAAGAGACTCATAGAA+TGG 0.548096 4_2:+15592901 Msa0591300:CDS
TTGTGTGGATCCTATTTCAA+CGG 0.548545 4_2:-15592753 None:intergenic
CGTAAGAACCTGCCCTTGGG+AGG 0.550231 4_2:-15590208 Msa0591280:intron
CCCGTAAGCTGAGGAGCGAA+AGG 0.554829 4_2:-15590155 Msa0591280:intron
GTAAGAACCTGCCCTTGGGA+GGG 0.557080 4_2:-15590207 Msa0591280:intron
GGAGGAATCCGCCCAAGGAG+GGG 0.562553 4_2:-15590134 Msa0591280:intron
AAGTTCGCCGTCAAATCCCA+GGG 0.564420 4_2:-15589773 Msa0591280:intron
ATTCTGTAGTCTTAGTAAGA+GGG 0.565369 4_2:+15592299 Msa0591300:intron
GACGCGAGCCCCTCCTTGGG+CGG 0.572606 4_2:+15590126 Msa0591300:CDS
AATTAGTGGATGCTGCCAAA+GGG 0.575951 4_2:+15592858 Msa0591300:CDS
CTTTCGCTCCTCAGCTTACG+GGG 0.577687 4_2:+15590156 Msa0591300:CDS
CCAGCTACTGATCACCGCCT+TGG 0.578071 4_2:+15590073 Msa0591300:intron
GAATTAGTGGATGCTGCCAA+AGG 0.584526 4_2:+15592857 Msa0591300:CDS
GTGAGATATCACATTGTTCG+AGG 0.586809 4_2:+15592345 Msa0591300:CDS
GGGCGTAAAGCGTCTGTAGG+TGG 0.587281 4_2:-15589802 Msa0591280:intron
TTCTGTAGTCTTAGTAAGAG+GGG 0.592028 4_2:+15592300 Msa0591300:intron
AGAGACTCATAGAATGGCAG+AGG 0.593635 4_2:+15592907 Msa0591300:CDS
CGAAAGGAGGAATCCGCCCA+AGG 0.596152 4_2:-15590139 Msa0591280:intron
GGAGTAAAGGATCGCCAACA+AGG 0.599055 4_2:+15592384 Msa0591300:CDS
CGGTATCTGGGAATAAGCAT+CGG 0.604685 4_2:-15589884 Msa0591280:intron
TTGAAAGCCATATTTCGACC+TGG 0.605724 4_2:-15592824 None:intergenic
TGCTAATACCCCGTAAGCTG+AGG 0.615470 4_2:-15590164 Msa0591280:intron
GGGAAGGTTAAGGATTTACC+TGG 0.617293 4_2:+15592321 Msa0591300:CDS
CGAGGAACCCTAGATGCTGT+CGG 0.617344 4_2:+15592363 Msa0591300:CDS
TGCGCCTAATAACCAACGAA+TGG 0.620213 4_2:-15592789 None:intergenic
AAGGAGGAATCCGCCCAAGG+AGG 0.622334 4_2:-15590136 Msa0591280:intron
TCCTGGAGAAGAAACAATGA+CGG 0.628601 4_2:-15589904 Msa0591280:intron
ATTGGGCGTAAAGCGTCTGT+AGG 0.632255 4_2:-15589805 Msa0591280:intron
GTCTGATTAGCTAGTTGGTG+AGG 0.641304 4_2:-15590106 Msa0591280:intron
CAGCAGCCGCGGTAAGACAG+AGG 0.650015 4_2:-15589849 Msa0591280:intron
GTAAGCTGAGGAGCGAAAGG+AGG 0.654589 4_2:-15590152 Msa0591280:intron
TCTGTAGTCTTAGTAAGAGG+GGG 0.664205 4_2:+15592301 Msa0591300:intron
ACAATGTGATATCTCACACC+AGG 0.678462 4_2:-15592339 Msa0591280:intron
GGTGAGGTAATAGCTTACCA+AGG 0.724474 4_2:-15590090 Msa0591280:intron
TTTACGTCAAGCAATACGTG+GGG 0.729232 4_2:+15592673 Msa0591300:CDS
GTTGAAATAGGATCCACACA+AGG 0.731975 4_2:+15592755 Msa0591300:CDS
GAGGTAATAGCTTACCAAGG+CGG 0.748896 4_2:-15590087 Msa0591280:intron
TTGCATCCTCTGTCTTACCG+CGG 0.760348 4_2:+15589843 Msa0591300:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTTTATAATTTATAAATAG+TGG - chr4_2:15590782-15590801 Msa0591280:intron 10.0%
!! AATTATAAACAACTTAAATT+CGG + chr4_2:15590791-15590810 Msa0591300:intron 10.0%
!!! AAAAAATTTTACATTTTTCA+GGG - chr4_2:15591170-15591189 Msa0591280:intron 10.0%
!!! AAAAAAATTTTACATTTTTC+AGG - chr4_2:15591171-15591190 Msa0591280:intron 10.0%
!!! AATGTAAAATTTTTTTTCTT+AGG + chr4_2:15591175-15591194 Msa0591300:intron 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr4_2:15591138-15591157 Msa0591280:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr4_2:15591138-15591157 Msa0591280:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr4_2:15591138-15591157 Msa0591280:intron 100.0%
! CGGGGGGGGGGGGGGGGGGG+GGG - chr4_2:15591144-15591163 Msa0591280:intron 100.0%
!! ATTATAAACAACTTAAATTC+GGG + chr4_2:15590792-15590811 Msa0591300:intron 15.0%
!! CATAGAATAGAAAATATTAA+TGG + chr4_2:15591625-15591644 Msa0591300:intron 15.0%
!!! CATTTTTTTATAACTTATAG+GGG - chr4_2:15592453-15592472 None:intergenic 15.0%
!!! CCATTTTTTTATAACTTATA+GGG - chr4_2:15592454-15592473 None:intergenic 15.0%
!!! TCCATTTTTTTATAACTTAT+AGG - chr4_2:15592455-15592474 None:intergenic 15.0%
!! TAGGACCATATAATATTTAT+GGG - chr4_2:15590450-15590469 Msa0591280:intron 20.0%
!! ATAGGACCATATAATATTTA+TGG - chr4_2:15590451-15590470 Msa0591280:intron 20.0%
!! TAGGACTGTATTATATTTAT+GGG - chr4_2:15590535-15590554 Msa0591280:intron 20.0%
!! ATAGGACTGTATTATATTTA+TGG - chr4_2:15590536-15590555 Msa0591280:intron 20.0%
!!! ATGAAAATAATGGACAAAAT+TGG + chr4_2:15590839-15590858 Msa0591300:intron 20.0%
!!! TTTTTTTAAGAATACTGAGT+CGG - chr4_2:15590989-15591008 Msa0591280:intron 20.0%
!! ACTCAGTATTCTTAAAAAAA+TGG + chr4_2:15590989-15591008 Msa0591300:intron 20.0%
!!! TTAATATACAACATAGGTTT+TGG - chr4_2:15591353-15591372 Msa0591280:intron 20.0%
!!! AAAAAAGAAAAGTGTTCAAT+TGG + chr4_2:15591985-15592004 Msa0591300:intron 20.0%
!!! AATTAGTTCTCGTTATTTTT+AGG + chr4_2:15592030-15592049 Msa0591300:intron 20.0%
!!! ATTAGTTCTCGTTATTTTTA+GGG + chr4_2:15592031-15592050 Msa0591300:intron 20.0%
!! CCCTATAAGTTATAAAAAAA+TGG + chr4_2:15592451-15592470 Msa0591300:intron 20.0%
! AAGCTATAAGTAATGTAACT+AGG - chr4_2:15590342-15590361 Msa0591280:intron 25.0%
! AGGACCATATAATATTTATG+GGG - chr4_2:15590449-15590468 Msa0591280:intron 25.0%
!!! TCAGTTTTTTTTTTCTCGAA+GGG - chr4_2:15590725-15590744 Msa0591280:intron 25.0%
! TCTTACGCATATGAAAATAA+TGG + chr4_2:15590829-15590848 Msa0591300:intron 25.0%
!!! ATAATGGACAAAATTGGATT+TGG + chr4_2:15590845-15590864 Msa0591300:intron 25.0%
! ATCCATAGTTAATCCTATTT+CGG - chr4_2:15590894-15590913 Msa0591280:intron 25.0%
! AAAATCGTCTTTAGTTAGAT+GGG - chr4_2:15590940-15590959 Msa0591280:intron 25.0%
!!! TTTTTTAAGAATACTGAGTC+GGG - chr4_2:15590988-15591007 Msa0591280:intron 25.0%
! AAATGGATAAATCAGAACTA+AGG + chr4_2:15591006-15591025 Msa0591300:intron 25.0%
!!! CACATAAGAACTTTTAGAAT+GGG - chr4_2:15591111-15591130 Msa0591280:intron 25.0%
!!! ACACATAAGAACTTTTAGAA+TGG - chr4_2:15591112-15591131 Msa0591280:intron 25.0%
! TTACAAATTCTGTGTTAATG+GGG - chr4_2:15591251-15591270 Msa0591280:intron 25.0%
! GTTACAAATTCTGTGTTAAT+GGG - chr4_2:15591252-15591271 Msa0591280:intron 25.0%
! AGTTACAAATTCTGTGTTAA+TGG - chr4_2:15591253-15591272 Msa0591280:intron 25.0%
! AACCTATGTTGTATATTAAG+AGG + chr4_2:15591354-15591373 Msa0591300:intron 25.0%
! AACCTCTTAATATACAACAT+AGG - chr4_2:15591359-15591378 Msa0591280:intron 25.0%
! TAGTATTTAGTTAGTGATCT+CGG - chr4_2:15591496-15591515 Msa0591280:intron 25.0%
!! GATAGATATCTTTTCAACAT+AGG + chr4_2:15591733-15591752 Msa0591300:intron 25.0%
! AAAAAGGATTCCTATTCTAA+AGG + chr4_2:15591809-15591828 Msa0591300:intron 25.0%
! AAAAGGATTCCTATTCTAAA+GGG + chr4_2:15591810-15591829 Msa0591300:intron 25.0%
!!! ATCCAATTGGGATTTTATTT+AGG + chr4_2:15591877-15591896 Msa0591300:intron 25.0%
!!! GATTTTATTTAGGAGGTATT+GGG + chr4_2:15591887-15591906 Msa0591300:intron 25.0%
!! GAAGATTATTCTTTTTCTTC+TGG - chr4_2:15591950-15591969 Msa0591280:intron 25.0%
! TTCAATTCTTTCGAAGTAAT+TGG - chr4_2:15592085-15592104 Msa0591280:intron 25.0%
! CAGAATGTTCTTGTAAATTA+TGG - chr4_2:15592285-15592304 Msa0591280:intron 25.0%
! AGGGGCTAAAATAATTTATT+TGG - chr4_2:15592435-15592454 None:intergenic 25.0%
! ACTAATCGATTACGATAAAT+TGG - chr4_2:15592540-15592559 None:intergenic 25.0%
!! TAATCGATTAGTTAACATGT+TGG + chr4_2:15592548-15592567 Msa0591300:intron 25.0%
!! TTTTTCCGTGTTTCATAATA+CGG - chr4_2:15592578-15592597 None:intergenic 25.0%
TAATGTAACTAGGAATCTCA+TGG - chr4_2:15590332-15590351 Msa0591280:intron 30.0%
GACCATATAATATTTATGGG+GGG - chr4_2:15590447-15590466 Msa0591280:intron 30.0%
GGACCATATAATATTTATGG+GGG - chr4_2:15590448-15590467 Msa0591280:intron 30.0%
AATATTAAGCGCATGGATAT+TGG - chr4_2:15590497-15590516 Msa0591280:intron 30.0%
GACTGTATTATATTTATGGG+AGG - chr4_2:15590532-15590551 Msa0591280:intron 30.0%
ATTGCATATCGTCATCAAAA+TGG + chr4_2:15590596-15590615 Msa0591300:intron 30.0%
TGGAAAAATTCACATTGCAT+TGG + chr4_2:15590616-15590635 Msa0591300:intron 30.0%
GGAAAAATTCACATTGCATT+GGG + chr4_2:15590617-15590636 Msa0591300:intron 30.0%
!!! CAGTTTTTTTTTTCTCGAAG+GGG - chr4_2:15590724-15590743 Msa0591280:intron 30.0%
!!! GTCAGTTTTTTTTTTCTCGA+AGG - chr4_2:15590726-15590745 Msa0591280:intron 30.0%
TAGTTAATCCTATTTCGGAT+AGG - chr4_2:15590889-15590908 Msa0591280:intron 30.0%
ATCCGAAATAGGATTAACTA+TGG + chr4_2:15590889-15590908 Msa0591300:intron 30.0%
AAATCGTCTTTAGTTAGATG+GGG - chr4_2:15590939-15590958 Msa0591280:intron 30.0%
CAAAATCGTCTTTAGTTAGA+TGG - chr4_2:15590941-15590960 Msa0591280:intron 30.0%
!!! AAGAACTTTTAGAATGGGAA+TGG - chr4_2:15591106-15591125 Msa0591280:intron 30.0%
!!! TTTTACATTTTTCAGGGTCT+CGG - chr4_2:15591164-15591183 Msa0591280:intron 30.0%
TATCACTACAACAAGCATAA+TGG + chr4_2:15591219-15591238 Msa0591300:intron 30.0%
AGTGAAAAGGATGATTCATT+CGG + chr4_2:15591296-15591315 Msa0591300:intron 30.0%
! CAATTGGATCTAAAATTGAC+GGG - chr4_2:15591866-15591885 Msa0591280:intron 30.0%
! CCAATTGGATCTAAAATTGA+CGG - chr4_2:15591867-15591886 Msa0591280:intron 30.0%
! CGTCAATTTTAGATCCAATT+GGG + chr4_2:15591865-15591884 Msa0591300:intron 30.0%
CTCCTAAATAAAATCCCAAT+TGG - chr4_2:15591882-15591901 Msa0591280:intron 30.0%
!! CAATTGGGATTTTATTTAGG+AGG + chr4_2:15591880-15591899 Msa0591300:intron 30.0%
!! GGATTTTATTTAGGAGGTAT+TGG + chr4_2:15591886-15591905 Msa0591300:intron 30.0%
TTGTAAATTATGGCCAATAC+CGG - chr4_2:15592275-15592294 Msa0591280:intron 30.0%
! ATTCTGTAGTCTTAGTAAGA+GGG + chr4_2:15592299-15592318 Msa0591300:intron 30.0%
! AACAAGGTCGTTCTAAATAT+GGG + chr4_2:15592400-15592419 Msa0591300:intron 30.0%
! ATAAATTGGATCGGATTTTG+CGG - chr4_2:15592526-15592545 None:intergenic 30.0%
TCGATTACGATAAATTGGAT+CGG - chr4_2:15592535-15592554 None:intergenic 30.0%
GTTAACCGTATTATGAAACA+CGG + chr4_2:15592570-15592589 Msa0591300:intron 30.0%
GAAACACGGAAAAAAATCAT+CGG + chr4_2:15592584-15592603 Msa0591300:intron 30.0%
ATTATCTATCGAGCTATGAA+AGG + chr4_2:15592615-15592634 Msa0591300:intron 30.0%
!! TCTTGCTTTTACTGCTATAT+CGG - chr4_2:15592705-15592724 None:intergenic 30.0%
CAAATTAAGTTCCGAATTAG+TGG + chr4_2:15592844-15592863 Msa0591300:CDS 30.0%
AAGAAACAATGACGGTATCT+GGG - chr4_2:15589899-15589918 Msa0591280:intron 35.0%
! ATCAGCTTTGTCTACAAACA+AGG - chr4_2:15590365-15590384 Msa0591280:intron 35.0%
GTTTGTAGACAAAGCTGATT+CGG + chr4_2:15590366-15590385 Msa0591300:intron 35.0%
TGCCCCCCATAAATATTATA+TGG + chr4_2:15590442-15590461 Msa0591300:intron 35.0%
ATTCACATTGCATTGGGTTT+AGG + chr4_2:15590623-15590642 Msa0591300:intron 35.0%
TTCACATTGCATTGGGTTTA+GGG + chr4_2:15590624-15590643 Msa0591300:intron 35.0%
CTGACTAATCCTAAGTCAAA+AGG + chr4_2:15590741-15590760 Msa0591300:intron 35.0%
ATCGTTGACACAAGAAAGAA+GGG - chr4_2:15591050-15591069 Msa0591280:intron 35.0%
!!! TTTACATTTTTCAGGGTCTC+GGG - chr4_2:15591163-15591182 Msa0591280:intron 35.0%
TTGCCTAGTATTCAGTGAAA+AGG + chr4_2:15591283-15591302 Msa0591300:intron 35.0%
! CATCCTTTTCACTGAATACT+AGG - chr4_2:15591289-15591308 Msa0591280:intron 35.0%
ATTGTACCATCCTAAAAGCA+AGG - chr4_2:15591387-15591406 Msa0591280:intron 35.0%
! TCTTTTCTGTATACTCTCTC+TGG + chr4_2:15591664-15591683 Msa0591300:intron 35.0%
TGTAAAGCGTGTGATAGTAA+CGG - chr4_2:15591692-15591711 Msa0591280:intron 35.0%
! CCGTCAATTTTAGATCCAAT+TGG + chr4_2:15591864-15591883 Msa0591300:intron 35.0%
!!! GTTCTCGTTATTTTTAGGGA+AGG + chr4_2:15592035-15592054 Msa0591300:intron 35.0%
TACTTCGAAAGAATTGAACG+AGG + chr4_2:15592087-15592106 Msa0591300:intron 35.0%
! CATGAGATTTTCACCTCATA+CGG - chr4_2:15592115-15592134 Msa0591280:intron 35.0%
TGAGGTGAAAATCTCATGTA+CGG + chr4_2:15592117-15592136 Msa0591300:intron 35.0%
!!! TGGTTTTTTAGGGGTAATAG+TGG - chr4_2:15592185-15592204 Msa0591280:intron 35.0%
!!! AGGCAGAGTTTGGTTTTTTA+GGG - chr4_2:15592195-15592214 Msa0591280:intron 35.0%
!!! AAGGCAGAGTTTGGTTTTTT+AGG - chr4_2:15592196-15592215 Msa0591280:intron 35.0%
GAAATCACTGCTTATATACC+CGG + chr4_2:15592253-15592272 Msa0591300:intron 35.0%
TGTAAATTATGGCCAATACC+GGG - chr4_2:15592274-15592293 Msa0591280:intron 35.0%
! CATTCTGTAGTCTTAGTAAG+AGG + chr4_2:15592298-15592317 Msa0591300:intron 35.0%
! TTCTGTAGTCTTAGTAAGAG+GGG + chr4_2:15592300-15592319 Msa0591300:intron 35.0%
! CATATTTAGAACGACCTTGT+TGG - chr4_2:15592401-15592420 Msa0591280:five_prime_UTR 35.0%
! CAACAAGGTCGTTCTAAATA+TGG + chr4_2:15592399-15592418 Msa0591300:intron 35.0%
! ACAAGGTCGTTCTAAATATG+GGG + chr4_2:15592401-15592420 Msa0591300:intron 35.0%
! TTTTACGTCAAGCAATACGT+GGG + chr4_2:15592672-15592691 Msa0591300:CDS 35.0%
!! CTTGCTTTTACTGCTATATC+GGG - chr4_2:15592704-15592723 None:intergenic 35.0%
TTGTGTGGATCCTATTTCAA+CGG - chr4_2:15592756-15592775 None:intergenic 35.0%
AAAGGAAGAGACTCATAGAA+TGG + chr4_2:15592901-15592920 Msa0591300:CDS 35.0%
AAGCGTTATCCGGAATGATT+GGG - chr4_2:15589825-15589844 Msa0591280:intron 40.0%
GAAGAAACAATGACGGTATC+TGG - chr4_2:15589900-15589919 Msa0591280:intron 40.0%
TCCTGGAGAAGAAACAATGA+CGG - chr4_2:15589907-15589926 Msa0591280:intron 40.0%
AAAAGAAGTTCATGACCCGT+AGG + chr4_2:15589926-15589945 Msa0591300:intron 40.0%
TTTACACATGCAAGTCGAAC+GGG - chr4_2:15590269-15590288 Msa0591280:intron 40.0%
CTTTACACATGCAAGTCGAA+CGG - chr4_2:15590270-15590289 Msa0591280:intron 40.0%
TTCATGCGCTTAATATTCGC+CGG + chr4_2:15590415-15590434 Msa0591300:intron 40.0%
TTGGATATGGGGTTGACATA+AGG - chr4_2:15590478-15590497 Msa0591280:intron 40.0%
AGCGCATGGATATTGGATAT+GGG - chr4_2:15590490-15590509 Msa0591280:intron 40.0%
AAGCGCATGGATATTGGATA+TGG - chr4_2:15590491-15590510 Msa0591280:intron 40.0%
ATGCAATGCGAATGGATAAG+AGG - chr4_2:15590583-15590602 Msa0591280:intron 40.0%
ATGACGATATGCAATGCGAA+TGG - chr4_2:15590591-15590610 Msa0591280:intron 40.0%
!!! TTTTTTTCTCGAAGGGGCAA+GGG - chr4_2:15590718-15590737 Msa0591280:intron 40.0%
!!! TTTTTTTTCTCGAAGGGGCA+AGG - chr4_2:15590719-15590738 Msa0591280:intron 40.0%
!!! GTTTCTCGACCTTTTGACTT+AGG - chr4_2:15590753-15590772 Msa0591280:intron 40.0%
! TGCGTAAGAGTGTGAAAAGA+AGG - chr4_2:15590818-15590837 Msa0591280:intron 40.0%
AGAACTAAGGCAAGATGAGA+TGG + chr4_2:15591019-15591038 Msa0591300:intron 40.0%
GATCGTTGACACAAGAAAGA+AGG - chr4_2:15591051-15591070 Msa0591280:intron 40.0%
CTTACCATTTGCGAAGTAAC+TGG + chr4_2:15591070-15591089 Msa0591300:intron 40.0%
AACTCCAGTTACTTCGCAAA+TGG - chr4_2:15591077-15591096 Msa0591280:intron 40.0%
!!! TTACATTTTTCAGGGTCTCG+GGG - chr4_2:15591162-15591181 Msa0591280:intron 40.0%
TTCACTGAATACTAGGCAAG+AGG - chr4_2:15591282-15591301 Msa0591280:intron 40.0%
! TTTTGGCAATGCAATGTGGT+TGG - chr4_2:15591336-15591355 Msa0591280:intron 40.0%
!! TAGGTTTTGGCAATGCAATG+TGG - chr4_2:15591340-15591359 Msa0591280:intron 40.0%
TTTCTTGCGTGATGAACTGT+TGG - chr4_2:15591461-15591480 Msa0591280:intron 40.0%
AACAGTTCATCACGCAAGAA+AGG + chr4_2:15591460-15591479 Msa0591300:intron 40.0%
AGCGGGTATCTTTCACAAAA+AGG + chr4_2:15591793-15591812 Msa0591300:intron 40.0%
!! GGTTATGCACCCTTTAGAAT+AGG - chr4_2:15591822-15591841 Msa0591280:intron 40.0%
TTAGTGTGAGCTTATCCATG+CGG - chr4_2:15591843-15591862 Msa0591280:intron 40.0%
!!! CGTTATTTTTAGGGAAGGAG+TGG + chr4_2:15592040-15592059 Msa0591300:intron 40.0%
!!! GGCAGAGTTTGGTTTTTTAG+GGG - chr4_2:15592194-15592213 Msa0591280:intron 40.0%
ACTTTACGTAAGGCAGAGTT+TGG - chr4_2:15592205-15592224 Msa0591280:intron 40.0%
TACTCTGGCAACTTTACGTA+AGG - chr4_2:15592215-15592234 Msa0591280:intron 40.0%
AGCAGTGATTTCAAATCCAG+AGG - chr4_2:15592245-15592264 Msa0591280:intron 40.0%
ACTGCTTATATACCCGGTAT+TGG + chr4_2:15592259-15592278 Msa0591300:intron 40.0%
! TCTGTAGTCTTAGTAAGAGG+GGG + chr4_2:15592301-15592320 Msa0591300:intron 40.0%
ACAATGTGATATCTCACACC+AGG - chr4_2:15592342-15592361 Msa0591280:five_prime_UTR 40.0%
GTGAGATATCACATTGTTCG+AGG + chr4_2:15592345-15592364 Msa0591300:CDS 40.0%
GCTTGACGTAAAACAGATAG+TGG - chr4_2:15592665-15592684 None:intergenic 40.0%
! GTTTTACGTCAAGCAATACG+TGG + chr4_2:15592671-15592690 Msa0591300:CDS 40.0%
TTTACGTCAAGCAATACGTG+GGG + chr4_2:15592673-15592692 Msa0591300:CDS 40.0%
GTAAAAGCAAGACGCGTAAA+CGG + chr4_2:15592713-15592732 Msa0591300:CDS 40.0%
CATCAAGTTCCCGTTGAAAT+AGG + chr4_2:15592743-15592762 Msa0591300:CDS 40.0%
TGTGTGGATCCTATTTCAAC+GGG - chr4_2:15592755-15592774 None:intergenic 40.0%
GTTGAAATAGGATCCACACA+AGG + chr4_2:15592755-15592774 Msa0591300:CDS 40.0%
! CTTGCCATTCGTTGGTTATT+AGG + chr4_2:15592785-15592804 Msa0591300:CDS 40.0%
! TATTTCGACCTGGACGTTTT+CGG - chr4_2:15592817-15592836 None:intergenic 40.0%
AAAACGTCCAGGTCGAAATA+TGG + chr4_2:15592817-15592836 Msa0591300:CDS 40.0%
TTGAAAGCCATATTTCGACC+TGG - chr4_2:15592827-15592846 None:intergenic 40.0%
TTTGGCAGCATCCACTAATT+CGG - chr4_2:15592858-15592877 None:intergenic 40.0%
! AATTAGTGGATGCTGCCAAA+GGG + chr4_2:15592858-15592877 Msa0591300:CDS 40.0%
! AGTCTCTTCCTTTTTGCGTA+TGG - chr4_2:15592894-15592913 None:intergenic 40.0%
CAAGCGTTATCCGGAATGAT+TGG - chr4_2:15589826-15589845 Msa0591280:intron 45.0%
CGGTATCTGGGAATAAGCAT+CGG - chr4_2:15589887-15589906 Msa0591280:intron 45.0%
! ACCGTCATTGTTTCTTCTCC+AGG + chr4_2:15589903-15589922 Msa0591300:CDS 45.0%
! GGGTCATGAACTTCTTTTCC+TGG - chr4_2:15589924-15589943 Msa0591280:intron 45.0%
! AGTGGGGAATTTTCCGCAAT+GGG - chr4_2:15589991-15590010 Msa0591280:intron 45.0%
GAGGTAATAGCTTACCAAGG+CGG - chr4_2:15590090-15590109 Msa0591280:intron 45.0%
GGTGAGGTAATAGCTTACCA+AGG - chr4_2:15590093-15590112 Msa0591280:intron 45.0%
! GTCTGATTAGCTAGTTGGTG+AGG - chr4_2:15590109-15590128 Msa0591280:intron 45.0%
TCTCATGGAGAGTTTGATCC+TGG - chr4_2:15590317-15590336 Msa0591280:intron 45.0%
TCATGCGCTTAATATTCGCC+GGG + chr4_2:15590416-15590435 Msa0591300:intron 45.0%
GGGTTGACATAAGGTGGTAT+AGG - chr4_2:15590469-15590488 Msa0591280:intron 45.0%
GATATGGGGTTGACATAAGG+TGG - chr4_2:15590475-15590494 Msa0591280:intron 45.0%
GCGCATGGATATTGGATATG+GGG - chr4_2:15590489-15590508 Msa0591280:intron 45.0%
TCCATGCGCTTAATATTCGC+CGG + chr4_2:15590500-15590519 Msa0591300:intron 45.0%
TATTTATGGGAGGCAACTCC+CGG - chr4_2:15590522-15590541 Msa0591280:intron 45.0%
GGGTTGACATAAGGTGGTAT+AGG - chr4_2:15590469-15590488 Msa0591280:intron 45.0%
GAATGGATAAGAGGCTTGTG+GGG - chr4_2:15590574-15590593 Msa0591280:intron 45.0%
CGAATGGATAAGAGGCTTGT+GGG - chr4_2:15590575-15590594 Msa0591280:intron 45.0%
CAACTGCTCCTATCCGAAAT+AGG + chr4_2:15590878-15590897 Msa0591300:intron 45.0%
!!! TACATTTTTCAGGGTCTCGG+GGG - chr4_2:15591161-15591180 Msa0591280:intron 45.0%
!! AGGTTGACCTCCTTGCTTTT+AGG + chr4_2:15591374-15591393 Msa0591300:intron 45.0%
!! TGACCTCCTTGCTTTTAGGA+TGG + chr4_2:15591378-15591397 Msa0591300:intron 45.0%
GTACCATCCTAAAAGCAAGG+AGG - chr4_2:15591384-15591403 Msa0591280:intron 45.0%
! TCTTCCATTTTGTCGCTGTG+GGG - chr4_2:15591432-15591451 Msa0591280:intron 45.0%
! GTCTTCCATTTTGTCGCTGT+GGG - chr4_2:15591433-15591452 Msa0591280:intron 45.0%
! AGTCTTCCATTTTGTCGCTG+TGG - chr4_2:15591434-15591453 Msa0591280:intron 45.0%
ACAGCGACAAAATGGAAGAC+TGG + chr4_2:15591433-15591452 Msa0591300:intron 45.0%
!! AGGAGGTATTGGGAACGAAT+TGG + chr4_2:15591897-15591916 Msa0591300:intron 45.0%
GAGTGGAGATTATCGAACGA+AGG + chr4_2:15592057-15592076 Msa0591300:intron 45.0%
TCATGTACGGTTCTGTAGAG+TGG + chr4_2:15592130-15592149 Msa0591300:intron 45.0%
! TAGTCTTAGTAAGAGGGGGA+AGG + chr4_2:15592305-15592324 Msa0591300:intron 45.0%
TAGTAAGAGGGGGAAGGTTA+AGG + chr4_2:15592311-15592330 Msa0591300:CDS 45.0%
GGGAAGGTTAAGGATTTACC+TGG + chr4_2:15592321-15592340 Msa0591300:CDS 45.0%
CTTTACTCCGACAGCATCTA+GGG - chr4_2:15592373-15592392 Msa0591280:five_prime_UTR 45.0%
! TCCCTTTTACGCTCATGTCA+CGG + chr4_2:15592478-15592497 Msa0591300:intron 45.0%
!! GAAAAGCACTTGCCATTCGT+TGG + chr4_2:15592777-15592796 Msa0591300:CDS 45.0%
TGCGCCTAATAACCAACGAA+TGG - chr4_2:15592792-15592811 None:intergenic 45.0%
! ATTTCGACCTGGACGTTTTC+GGG - chr4_2:15592816-15592835 None:intergenic 45.0%
! GAATTAGTGGATGCTGCCAA+AGG + chr4_2:15592857-15592876 Msa0591300:CDS 45.0%
AGAGACTCATAGAATGGCAG+AGG + chr4_2:15592907-15592926 Msa0591300:CDS 45.0%
! ATTGGGCGTAAAGCGTCTGT+AGG - chr4_2:15589808-15589827 Msa0591280:intron 50.0%
CGCTTTACGCCCAATCATTC+CGG + chr4_2:15589813-15589832 Msa0591300:CDS 50.0%
CAGAGGATGCAAGCGTTATC+CGG - chr4_2:15589835-15589854 Msa0591280:intron 50.0%
TTGCATCCTCTGTCTTACCG+CGG + chr4_2:15589843-15589862 Msa0591300:CDS 50.0%
! CAGTGGGGAATTTTCCGCAA+TGG - chr4_2:15589992-15590011 Msa0591280:intron 50.0%
AGAGGATGATCAGCCACACT+GGG - chr4_2:15590049-15590068 Msa0591280:intron 50.0%
AGTGTGGCTGATCATCCTCT+CGG + chr4_2:15590049-15590068 Msa0591300:intron 50.0%
! CTCGCGTCTGATTAGCTAGT+TGG - chr4_2:15590114-15590133 Msa0591280:intron 50.0%
TCCTTTCGCTCCTCAGCTTA+CGG + chr4_2:15590154-15590173 Msa0591300:CDS 50.0%
TGCTAATACCCCGTAAGCTG+AGG - chr4_2:15590167-15590186 Msa0591280:intron 50.0%
AGGGGAACAACAGCTGGAAA+CGG - chr4_2:15590191-15590210 Msa0591280:intron 50.0%
TATTTATGGGGGGCAACTCC+CGG - chr4_2:15590437-15590456 Msa0591280:intron 50.0%
CCATGCGCTTAATATTCGCC+GGG + chr4_2:15590501-15590520 Msa0591300:intron 50.0%
CTTGTGGGGTTGACATAAGG+TGG - chr4_2:15590560-15590579 Msa0591280:intron 50.0%
AGGCTTGTGGGGTTGACATA+AGG - chr4_2:15590563-15590582 Msa0591280:intron 50.0%
GCGAATGGATAAGAGGCTTG+TGG - chr4_2:15590576-15590595 Msa0591280:intron 50.0%
TGATGACTTCCACCACGTCA+AGG + chr4_2:15590663-15590682 Msa0591300:intron 50.0%
! AGGGAAGGGGTATAACTCAG+CGG - chr4_2:15590699-15590718 Msa0591280:intron 50.0%
!!! ACATTTTTCAGGGTCTCGGG+GGG - chr4_2:15591160-15591179 Msa0591280:intron 50.0%
AGATACCCGCTTTCGTGCTT+TGG - chr4_2:15591784-15591803 Msa0591280:intron 50.0%
! CTAAAGGGTGCATAACCGCA+TGG + chr4_2:15591825-15591844 Msa0591300:intron 50.0%
ATTGAACGAGGAGCCGTATG+AGG + chr4_2:15592099-15592118 Msa0591300:intron 50.0%
GGTTCTGTAGAGTGGCAGTA+AGG + chr4_2:15592138-15592157 Msa0591300:intron 50.0%
TCCAGAGGTTAAGCGTACTC+TGG - chr4_2:15592230-15592249 Msa0591280:intron 50.0%
CCTTTACTCCGACAGCATCT+AGG - chr4_2:15592374-15592393 Msa0591280:five_prime_UTR 50.0%
CCTAGATGCTGTCGGAGTAA+AGG + chr4_2:15592371-15592390 Msa0591300:CDS 50.0%
GGAGTAAAGGATCGCCAACA+AGG + chr4_2:15592384-15592403 Msa0591300:CDS 50.0%
GCCGTGACATGAGCGTAAAA+GGG - chr4_2:15592482-15592501 None:intergenic 50.0%
! GGCAAGTGCTTTTCCTTGTG+TGG - chr4_2:15592771-15592790 None:intergenic 50.0%
TATGGCATCGCCATTCCCTT+TGG - chr4_2:15592876-15592895 None:intergenic 50.0%
TGGCGATGCCATACGCAAAA+AGG + chr4_2:15592883-15592902 Msa0591300:CDS 50.0%
CGTGGAGGTAAAAGGCCTAC+GGG - chr4_2:15589944-15589963 Msa0591280:intron 55.0%
GCGTGGAGGTAAAAGGCCTA+CGG - chr4_2:15589945-15589964 Msa0591280:intron 55.0%
! GTAGGCCTTTTACCTCCACG+CGG + chr4_2:15589944-15589963 Msa0591300:intron 55.0%
CAATGCCGCGTGGAGGTAAA+AGG - chr4_2:15589952-15589971 Msa0591280:intron 55.0%
AGACAAGGCCCAGACTCCTA+CGG - chr4_2:15590022-15590041 Msa0591280:intron 55.0%
GAGAGGATGATCAGCCACAC+TGG - chr4_2:15590050-15590069 Msa0591280:intron 55.0%
TGATCAGTAGCTGGTCCGAG+AGG - chr4_2:15590067-15590086 Msa0591280:intron 55.0%
GTAAGCTGAGGAGCGAAAGG+AGG - chr4_2:15590155-15590174 Msa0591280:intron 55.0%
CCTTTCGCTCCTCAGCTTAC+GGG + chr4_2:15590155-15590174 Msa0591300:CDS 55.0%
CTTTCGCTCCTCAGCTTACG+GGG + chr4_2:15590156-15590175 Msa0591300:CDS 55.0%
AGCTGTTGTTCCCCTCCCAA+GGG + chr4_2:15590196-15590215 Msa0591300:CDS 55.0%
TAAGAACCTGCCCTTGGGAG+GGG - chr4_2:15590209-15590228 Msa0591280:intron 55.0%
GTAAGAACCTGCCCTTGGGA+GGG - chr4_2:15590210-15590229 Msa0591280:intron 55.0%
ACGCGTAAGAACCTGCCCTT+GGG - chr4_2:15590214-15590233 Msa0591280:intron 55.0%
AACGCGTAAGAACCTGCCCT+TGG - chr4_2:15590215-15590234 Msa0591280:intron 55.0%
GGAAGTGGTGTTTCCAGTGG+CGG - chr4_2:15590248-15590267 Msa0591280:intron 55.0%
ACGGGAAGTGGTGTTTCCAG+TGG - chr4_2:15590251-15590270 Msa0591280:intron 55.0%
CATGCAAGTCGAACGGGAAG+TGG - chr4_2:15590263-15590282 Msa0591280:intron 55.0%
GGAGAGTTTGATCCTGGCTC+AGG - chr4_2:15590311-15590330 Msa0591280:intron 55.0%
CCCGGCGAATATTAAGCGCA+TGG - chr4_2:15590419-15590438 Msa0591280:intron 55.0%
! AGAGTGTCACCTTGACGTGG+TGG - chr4_2:15590675-15590694 Msa0591280:intron 55.0%
! GGTAGAGTGTCACCTTGACG+TGG - chr4_2:15590678-15590697 Msa0591280:intron 55.0%
TTCTCGAAGGGGCAAGGGAA+GGG - chr4_2:15590713-15590732 Msa0591280:intron 55.0%
TTTCTCGAAGGGGCAAGGGA+AGG - chr4_2:15590714-15590733 Msa0591280:intron 55.0%
!!! ATTTTTCAGGGTCTCGGGGG+GGG - chr4_2:15591158-15591177 Msa0591280:intron 55.0%
!!! CATTTTTCAGGGTCTCGGGG+GGG - chr4_2:15591159-15591178 Msa0591280:intron 55.0%
GACCCACCAAAGCACGAAAG+CGG + chr4_2:15591775-15591794 Msa0591300:intron 55.0%
ACCCACCAAAGCACGAAAGC+GGG + chr4_2:15591776-15591795 Msa0591300:intron 55.0%
ACCCGCTTTCGTGCTTTGGT+GGG - chr4_2:15591780-15591799 Msa0591280:intron 55.0%
TACCCGCTTTCGTGCTTTGG+TGG - chr4_2:15591781-15591800 Msa0591280:intron 55.0%
GCCAGAGTACGCTTAACCTC+TGG + chr4_2:15592226-15592245 Msa0591300:intron 55.0%
CGAGGAACCCTAGATGCTGT+CGG + chr4_2:15592363-15592382 Msa0591300:CDS 55.0%
CGCCGTGACATGAGCGTAAA+AGG - chr4_2:15592483-15592502 None:intergenic 55.0%
TTTACGCTCATGTCACGGCG+AGG + chr4_2:15592483-15592502 Msa0591300:intron 55.0%
GTGGATGCTGCCAAAGGGAA+TGG + chr4_2:15592863-15592882 Msa0591300:CDS 55.0%
! GGGCGTAAAGCGTCTGTAGG+TGG - chr4_2:15589805-15589824 Msa0591280:intron 60.0%
TAACTCTGTGCCAGCAGCCG+CGG - chr4_2:15589863-15589882 Msa0591280:intron 60.0%
CGCAATGGGCGAAAGCCTGA+CGG - chr4_2:15589977-15589996 Msa0591280:intron 60.0%
CGTCAGGCTTTCGCCCATTG+CGG + chr4_2:15589975-15589994 Msa0591300:intron 60.0%
GACAAGGCCCAGACTCCTAC+GGG - chr4_2:15590021-15590040 Msa0591280:intron 60.0%
GCCTTGTCTCAGTCCCAGTG+TGG + chr4_2:15590033-15590052 Msa0591300:intron 60.0%
GCCACACTGGGACTGAGACA+AGG - chr4_2:15590037-15590056 Msa0591280:intron 60.0%
CCAAGGCGGTGATCAGTAGC+TGG - chr4_2:15590076-15590095 Msa0591280:intron 60.0%
CCAGCTACTGATCACCGCCT+TGG + chr4_2:15590073-15590092 Msa0591300:intron 60.0%
AGGAGGAATCCGCCCAAGGA+GGG - chr4_2:15590138-15590157 Msa0591280:intron 60.0%
AAGGAGGAATCCGCCCAAGG+AGG - chr4_2:15590139-15590158 Msa0591280:intron 60.0%
CGAAAGGAGGAATCCGCCCA+AGG - chr4_2:15590142-15590161 Msa0591280:intron 60.0%
CCCGTAAGCTGAGGAGCGAA+AGG - chr4_2:15590158-15590177 Msa0591280:intron 60.0%
CTTGGGAGGGGAACAACAGC+TGG - chr4_2:15590197-15590216 Msa0591280:intron 60.0%
CAGCTGTTGTTCCCCTCCCA+AGG + chr4_2:15590195-15590214 Msa0591300:CDS 60.0%
CGTAAGAACCTGCCCTTGGG+AGG - chr4_2:15590211-15590230 Msa0591280:intron 60.0%
!! TGGTGTTTCCAGTGGCGGAC+GGG - chr4_2:15590243-15590262 Msa0591280:intron 60.0%
! GTGGTGTTTCCAGTGGCGGA+CGG - chr4_2:15590244-15590263 Msa0591280:intron 60.0%
TGGCTCAGGATGAACGCTGG+CGG - chr4_2:15590297-15590316 Msa0591280:intron 60.0%
TCCTGGCTCAGGATGAACGC+TGG - chr4_2:15590300-15590319 Msa0591280:intron 60.0%
TCTCGAAGGGGCAAGGGAAG+GGG - chr4_2:15590712-15590731 Msa0591280:intron 60.0%
!!! TTTTTCAGGGTCTCGGGGGG+GGG - chr4_2:15591157-15591176 Msa0591280:intron 60.0%
GCGAGGAGAAAGGCAGCAAG+AGG - chr4_2:15591410-15591429 Msa0591280:intron 60.0%
! CATTTTGTCGCTGTGGGGCG+AGG - chr4_2:15591427-15591446 Msa0591280:intron 60.0%
CTCGCCCCACAGCGACAAAA+TGG + chr4_2:15591425-15591444 Msa0591300:intron 60.0%
CAGCAGCCGCGGTAAGACAG+AGG - chr4_2:15589852-15589871 Msa0591280:intron 65.0%
CTCTGTCTTACCGCGGCTGC+TGG + chr4_2:15589850-15589869 Msa0591300:CDS 65.0%
TCCTACGGGAGGCAGCAGTG+GGG - chr4_2:15590007-15590026 Msa0591280:intron 65.0%
CTCCTACGGGAGGCAGCAGT+GGG - chr4_2:15590008-15590027 Msa0591280:intron 65.0%
ACTCCTACGGGAGGCAGCAG+TGG - chr4_2:15590009-15590028 Msa0591280:intron 65.0%
TGCTGCCTCCCGTAGGAGTC+TGG + chr4_2:15590010-15590029 Msa0591300:intron 65.0%
GCTGCCTCCCGTAGGAGTCT+GGG + chr4_2:15590011-15590030 Msa0591300:intron 65.0%
AAGGCCCAGACTCCTACGGG+AGG - chr4_2:15590018-15590037 Msa0591280:intron 65.0%
ATCAGACGCGAGCCCCTCCT+TGG + chr4_2:15590122-15590141 Msa0591300:CDS 65.0%
TCAGACGCGAGCCCCTCCTT+GGG + chr4_2:15590123-15590142 Msa0591300:CDS 65.0%
GGAGGAATCCGCCCAAGGAG+GGG - chr4_2:15590137-15590156 Msa0591280:intron 65.0%
GTTGTTCCCCTCCCAAGGGC+AGG + chr4_2:15590200-15590219 Msa0591300:CDS 65.0%
GTTACTCACCCGTCCGCCAC+TGG + chr4_2:15590232-15590251 Msa0591300:intron 65.0%
GCCAGCGTTCATCCTGAGCC+AGG + chr4_2:15590296-15590315 Msa0591300:intron 65.0%
!! TTTTCAGGGTCTCGGGGGGG+GGG - chr4_2:15591156-15591175 Msa0591280:intron 65.0%
TCGCTGTGGGGCGAGGAGAA+AGG - chr4_2:15591420-15591439 Msa0591280:intron 65.0%
GGCGCATCCCGAAAACGTCC+AGG + chr4_2:15592806-15592825 Msa0591300:CDS 65.0%
GACGGAGCAATGCCGCGTGG+AGG - chr4_2:15589959-15589978 Msa0591280:intron 70.0%
CCTGACGGAGCAATGCCGCG+TGG - chr4_2:15589962-15589981 Msa0591280:intron 70.0%
CCACGCGGCATTGCTCCGTC+AGG + chr4_2:15589959-15589978 Msa0591300:intron 70.0%
TCCCCACTGCTGCCTCCCGT+AGG + chr4_2:15590003-15590022 Msa0591300:intron 70.0%
TTTCAGGGTCTCGGGGGGGG+GGG - chr4_2:15591155-15591174 Msa0591280:intron 70.0%
GACGCGAGCCCCTCCTTGGG+CGG + chr4_2:15590126-15590145 Msa0591300:CDS 75.0%
TTCAGGGTCTCGGGGGGGGG+GGG - chr4_2:15591154-15591173 Msa0591280:intron 75.0%
! TCAGGGTCTCGGGGGGGGGG+GGG - chr4_2:15591153-15591172 Msa0591280:intron 80.0%
! AGGGTCTCGGGGGGGGGGGG+GGG - chr4_2:15591151-15591170 Msa0591280:intron 85.0%
! CAGGGTCTCGGGGGGGGGGG+GGG - chr4_2:15591152-15591171 Msa0591280:intron 85.0%
! TCTCGGGGGGGGGGGGGGGG+GGG - chr4_2:15591147-15591166 Msa0591280:intron 90.0%
! GTCTCGGGGGGGGGGGGGGG+GGG - chr4_2:15591148-15591167 Msa0591280:intron 90.0%
! GGTCTCGGGGGGGGGGGGGG+GGG - chr4_2:15591149-15591168 Msa0591280:intron 90.0%
! GGGTCTCGGGGGGGGGGGGG+GGG - chr4_2:15591150-15591169 Msa0591280:intron 90.0%
! TCGGGGGGGGGGGGGGGGGG+GGG - chr4_2:15591145-15591164 Msa0591280:intron 95.0%
! CTCGGGGGGGGGGGGGGGGG+GGG - chr4_2:15591146-15591165 Msa0591280:intron 95.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 15589775 15592958 15589775 ID=Msa0591300;Name=Msa0591300
chr4_2 mRNA 15589775 15592958 15589775 ID=Msa0591300-mRNA-1;Parent=Msa0591300;Name=Msa0591300-mRNA-1;_AED=0.43;_eAED=0.44;_QI=0|0|0|1|1|1|4|0|238
chr4_2 exon 15589775 15589943 15589775 ID=Msa0591300-mRNA-1:exon:4486;Parent=Msa0591300-mRNA-1
chr4_2 exon 15590077 15590221 15590077 ID=Msa0591300-mRNA-1:exon:4487;Parent=Msa0591300-mRNA-1
chr4_2 exon 15592308 15592405 15592308 ID=Msa0591300-mRNA-1:exon:4488;Parent=Msa0591300-mRNA-1
chr4_2 exon 15592654 15592958 15592654 ID=Msa0591300-mRNA-1:exon:4489;Parent=Msa0591300-mRNA-1
chr4_2 CDS 15589775 15589943 15589775 ID=Msa0591300-mRNA-1:cds;Parent=Msa0591300-mRNA-1
chr4_2 CDS 15590077 15590221 15590077 ID=Msa0591300-mRNA-1:cds;Parent=Msa0591300-mRNA-1
chr4_2 CDS 15592308 15592405 15592308 ID=Msa0591300-mRNA-1:cds;Parent=Msa0591300-mRNA-1
chr4_2 CDS 15592654 15592958 15592654 ID=Msa0591300-mRNA-1:cds;Parent=Msa0591300-mRNA-1
Gene Sequence

>Msa0591300

CTGGGATTTGACGGCGAACTTAAAAAGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTACCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCAGATACCGTCATTGTTTCTTCTCCAGGAAAAGAAGTTCATGACCCCTACTGATCACCGCCTTGGTAAGCTATTACCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTTGGGCGGATTCCTCCTTTCGCTCCTCAGCTTACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCAGTCTTAGTAAGAGGGGGAAGGTTAAGGATTTACCTGGTGTGAGATATCACATTGTTCGAGGAACCCTAGATGCTGTCGGAGTAAAGGATCGCCAACAAGAAACAAATCCACTATCTGTTTTACGTCAAGCAATACGTGGGGTAACTCCCGATATAGCAGTAAAAGCAAGACGCGTAAACGGATCGACTCATCAAGTTCCCGTTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGCGCATCCCGAAAACGTCCAGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAATGGCGATGCCATACGCAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAA

Protein sequence

>Msa0591300

LGFDGELKKPPTDALRPIIPDNACILCLTAAAGTELADAYSQIPSLFLLQEKKFMTPTDHRLGKLLPHQLANQTRAPPWADSSFRSSAYGVLAAVSSCCSPPKGSLSKRGKVKDLPGVRYHIVRGTLDAVGVKDRQQETNPLSVLRQAIRGVTPDIAVKARRVNGSTHQVPVEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGNGDAIRKKEETHRMAEANRAFAHFR*