AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0468210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 143 sgRNAs with CRISPR-Local

Find 534 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTAATTTGTTGTCATTATT+TGG 0.101608 3_3:+69795906 Msa0468210:three_prime_UTR
TGGATTCTATACTCCGATTT+TGG 0.102525 3_3:-69796045 None:intergenic
ATTTGAACTTGATCAATTTA+AGG 0.133413 3_3:+69792845 Msa0468210:CDS
ATTGAACAAGGCACAAAATT+TGG 0.144991 3_3:+69789673 Msa0468210:five_prime_UTR
GAGACATTGAAGATGAAATT+TGG 0.164347 3_3:+69789325 Msa0468210:five_prime_UTR
TCTGGGAGTTCAAGCGTTTC+AGG 0.165044 3_3:+69789447 Msa0468210:five_prime_UTR
CATGTACTCATTCACCTTCC+TGG 0.233439 3_3:-69790259 None:intergenic
CGACATCAACAATTCTCTTT+TGG 0.234544 3_3:+69790527 Msa0468210:five_prime_UTR
GATTTCATAATGGTTATAAT+TGG 0.235080 3_3:-69790115 None:intergenic
CTATTAACTCATTTGATAAA+AGG 0.246147 3_3:-69790608 None:intergenic
GAGTTAATAGCCCTTGCTTT+TGG 0.270052 3_3:+69790621 Msa0468210:five_prime_UTR
ATTAGGCGGGTTGATGGTTT+TGG 0.273462 3_3:-69788965 None:intergenic
CATGAAATTCGTGGAAAATC+TGG 0.286286 3_3:+69790278 Msa0468210:five_prime_UTR
AAGTATGGTTGGAACGGTTT+TGG 0.291180 3_3:+69789303 Msa0468210:five_prime_UTR
AGACATTGAAGATGAAATTT+GGG 0.331218 3_3:+69789326 Msa0468210:five_prime_UTR
CAGCTCTCTGGTTCTCTCTC+TGG 0.344115 3_3:+69790428 Msa0468210:five_prime_UTR
ATGAATTTCTTCCCCAAAAT+CGG 0.347127 3_3:+69796032 Msa0468210:three_prime_UTR
AAATGTGGGAGGAAAGTTTA+AGG 0.354228 3_3:+69789602 Msa0468210:five_prime_UTR
TACAAGCCTTTCTATGCCTT+TGG 0.354998 3_3:+69790192 Msa0468210:five_prime_UTR
GGGAGTGAATAGAGTTTCTC+TGG 0.355835 3_3:+69789429 Msa0468210:five_prime_UTR
TTCGTGGAAAATCTGGAAAA+TGG 0.365028 3_3:+69790285 Msa0468210:five_prime_UTR
TTTGATAAAAGGAAACCATT+TGG 0.367470 3_3:-69790597 None:intergenic
GAGAGCTGCCAAATGATTCT+TGG 0.367558 3_3:-69790413 None:intergenic
GTCCCTGGTTCCTCCAAGTA+TGG 0.370338 3_3:+69789288 Msa0468210:five_prime_UTR
TGGAGGTGGGACGCCGTCCC+TGG 0.373141 3_3:+69789273 Msa0468210:five_prime_UTR
TTTGTTATTAGGCGGGTTGA+TGG 0.377434 3_3:-69788971 None:intergenic
GTAGACACAACTTTACCTAT+TGG 0.377880 3_3:+69790166 Msa0468210:five_prime_UTR
CCTTTCTATGCCTTTGGCCT+CGG 0.379342 3_3:+69790198 Msa0468210:five_prime_UTR
AAAAGTGTGGGGTTGAGAAT+TGG 0.383894 3_3:+69789539 Msa0468210:five_prime_UTR
TAAATAACTTTAATTTCTTT+AGG 0.388534 3_3:-69792103 None:intergenic
GAAAATCACATCATTCTTTG+TGG 0.396361 3_3:-69795876 None:intergenic
AAGTTGCAGCAAGTGGAATA+AGG 0.396902 3_3:+69792166 Msa0468210:CDS
TTCTTTGTGGCACCCTAGCC+TGG 0.400340 3_3:-69795863 None:intergenic
TTGGGGTTATTGACTCTTGG+AGG 0.401602 3_3:+69790640 Msa0468210:five_prime_UTR
GTTCTAGTTGTATTTGGAAT+GGG 0.403462 3_3:+69792072 Msa0468210:intron
ATGTACTCATTCACCTTCCT+GGG 0.403580 3_3:-69790258 None:intergenic
AGAAGTTGTTGAAGAGTTGT+GGG 0.410136 3_3:+69789470 Msa0468210:five_prime_UTR
AGTAGCTGCTGATTTCATAA+TGG 0.410732 3_3:-69790125 None:intergenic
TGCTGAAATTTCGATGGAAA+TGG 0.412741 3_3:+69789360 Msa0468210:five_prime_UTR
TACGTTTGATTGTAAGAAGA+TGG 0.413518 3_3:+69789390 Msa0468210:five_prime_UTR
TTGTGGGAGGGCACATGGTT+TGG 0.414910 3_3:+69789486 Msa0468210:five_prime_UTR
TGATCACCACTGTTCTAATC+TGG 0.416254 3_3:+69792289 Msa0468210:CDS
AAGCGTTACCAAGAATCATT+TGG 0.417084 3_3:+69790405 Msa0468210:five_prime_UTR
TCTGGTTCTCTCTCTGGTTG+AGG 0.422048 3_3:+69790434 Msa0468210:five_prime_UTR
CTGAAGAAGGGGTGATGGTT+GGG 0.425240 3_3:-69789051 None:intergenic
GGTTCTAGTTGTATTTGGAA+TGG 0.425891 3_3:+69792071 Msa0468210:intron
TGGATCACTTAGCCTCATAT+AGG 0.428653 3_3:-69790577 None:intergenic
GAGAAGTTGTTGAAGAGTTG+TGG 0.438707 3_3:+69789469 Msa0468210:five_prime_UTR
GAAAGGCTTGTACTTCCAAT+AGG 0.443597 3_3:-69790181 None:intergenic
AAAACCGTTCCAACCATACT+TGG 0.446657 3_3:-69789301 None:intergenic
AGAATCATTTGGCAGCTCTC+TGG 0.455230 3_3:+69790416 Msa0468210:five_prime_UTR
TAGCAAGCATGATGTGAATA+CGG 0.457153 3_3:+69792127 Msa0468210:CDS
GTTGTCATTATTTGGAGAGA+TGG 0.458448 3_3:+69795914 Msa0468210:three_prime_UTR
GATGGAAGAGATGATGTTGT+TGG 0.466524 3_3:+69789408 Msa0468210:five_prime_UTR
GAGGGCACATGGTTTGGATG+AGG 0.485338 3_3:+69789492 Msa0468210:five_prime_UTR
AAAAGTGTTTGTTATTAGGC+GGG 0.488015 3_3:-69788978 None:intergenic
AGGTGAATGTAAGCTGAAGA+AGG 0.488519 3_3:-69789064 None:intergenic
GCTGAAGAAGGGGTGATGGT+TGG 0.488753 3_3:-69789052 None:intergenic
TGGGGTTATTGACTCTTGGA+GGG 0.489544 3_3:+69790641 Msa0468210:five_prime_UTR
GCTTCATTGCCTCATCAGAC+TGG 0.495628 3_3:+69789577 Msa0468210:five_prime_UTR
GATTAGAACAGTGGTGATCA+TGG 0.496884 3_3:-69792286 None:intergenic
CAACCATACTTGGAGGAACC+AGG 0.499090 3_3:-69789291 None:intergenic
CTGGTTCCTCCAAGTATGGT+TGG 0.504709 3_3:+69789292 Msa0468210:five_prime_UTR
ACATGTCCACTCTCAACATA+AGG 0.504850 3_3:-69790465 None:intergenic
TCCTCCAAGTATGGTTGGAA+CGG 0.506169 3_3:+69789297 Msa0468210:five_prime_UTR
ATGGAAGAGATGATGTTGTT+GGG 0.509834 3_3:+69789409 Msa0468210:five_prime_UTR
GCGGAGCCGAGAGCGACGAT+GGG 0.516001 3_3:-69789124 None:intergenic
CGGAAGTTCTATTCTTGAAG+AGG 0.516704 3_3:+69795627 Msa0468210:CDS
AAAAGAGAGTGGCCTATATG+AGG 0.521359 3_3:+69790565 Msa0468210:five_prime_UTR
GACTTCCCCATCGTCGCTCT+CGG 0.522224 3_3:+69789118 Msa0468210:five_prime_UTR
AAGAGTTGTGGGAGGGCACA+TGG 0.523910 3_3:+69789481 Msa0468210:five_prime_UTR
AGCGGAGCCGAGAGCGACGA+TGG 0.527821 3_3:-69789125 None:intergenic
TGGCTCTGCAGAGAAATCAA+TGG 0.537726 3_3:+69789193 Msa0468210:five_prime_UTR
GAAACTAGTGCCAATAAAAG+AGG 0.538177 3_3:+69795804 Msa0468210:CDS
GTGTCATAAACTACATTCAA+TGG 0.538852 3_3:+69789173 Msa0468210:five_prime_UTR
GCAGAAAGCTGAAGAGGATG+AGG 0.539084 3_3:+69795776 Msa0468210:CDS
GTCGTTTGTTTGCGTTGAAG+CGG 0.539866 3_3:-69789143 None:intergenic
GGTGAATGTAAGCTGAAGAA+GGG 0.540772 3_3:-69789063 None:intergenic
GTCAATAACCCCAAAAGCAA+GGG 0.541226 3_3:-69790631 None:intergenic
AACTGAGCAGAAAGCTGAAG+AGG 0.542583 3_3:+69795770 Msa0468210:CDS
TGTATTTGGAATGGGTGTGT+TGG 0.546120 3_3:+69792080 Msa0468210:CDS
TAATAGCAAGGACAAAGCAT+TGG 0.546969 3_3:+69790338 Msa0468210:five_prime_UTR
TAGACCTCTTGCTGTTCTCA+AGG 0.547538 3_3:-69790376 None:intergenic
ATCTGCACGACAATATTCTC+AGG 0.547903 3_3:+69792334 Msa0468210:CDS
AAGTTTAAGGCTCGCCATTG+AGG 0.549781 3_3:+69789615 Msa0468210:five_prime_UTR
ATGAGTTGGCTGTGCCTCAA+TGG 0.550891 3_3:-69789629 None:intergenic
CACTGTTCTAATCTGGACTC+TGG 0.551794 3_3:+69792296 Msa0468210:CDS
CCGAGGCCAAAGGCATAGAA+AGG 0.554611 3_3:-69790198 None:intergenic
TGGCAGCGTTTACGACAGAA+AGG 0.557441 3_3:-69789088 None:intergenic
TATAAACCTTATGTTGAGAG+TGG 0.557941 3_3:+69790459 Msa0468210:five_prime_UTR
ATGAGGCTAAGTGATCCAAA+TGG 0.560677 3_3:+69790582 Msa0468210:five_prime_UTR
GTAGCTTCTTGGAGTGCAGA+AGG 0.561374 3_3:-69790669 None:intergenic
ACCGTTCCAACCATACTTGG+AGG 0.563000 3_3:-69789298 None:intergenic
TTCTTACAATCAAACGTACC+CGG 0.565207 3_3:-69789385 None:intergenic
AGTCAATAACCCCAAAAGCA+AGG 0.565995 3_3:-69790632 None:intergenic
TGCAAAGACGCCGCTTCAGA+CGG 0.568649 3_3:+69789243 Msa0468210:five_prime_UTR
AGTTGTTGAAGAGTTGTGGG+AGG 0.572758 3_3:+69789473 Msa0468210:five_prime_UTR
AACAAGGCACAAAATTTGGA+AGG 0.574125 3_3:+69789677 Msa0468210:five_prime_UTR
GAAGGCAATGGAAATTCCCC+TGG 0.579543 3_3:-69790039 None:intergenic
AGCAAGCATGATGTGAATAC+GGG 0.581768 3_3:+69792128 Msa0468210:CDS
AATTTCGATGGAAATGGACC+CGG 0.583112 3_3:+69789366 Msa0468210:five_prime_UTR
CTCATCAGACTGGTGAAATG+TGG 0.586079 3_3:+69789587 Msa0468210:five_prime_UTR
TCATAAACAGAAACATGAGT+TGG 0.592813 3_3:-69789643 None:intergenic
GAATGAGTACATGAAATTCG+TGG 0.596236 3_3:+69790269 Msa0468210:five_prime_UTR
ACTAGTAGAGCCGAGGCCAA+AGG 0.596278 3_3:-69790208 None:intergenic
TCAGCGGATTGTGTCTCAGA+AGG 0.596735 3_3:-69790057 None:intergenic
CTGTCCTTGAGAACAGCAAG+AGG 0.597347 3_3:+69790372 Msa0468210:five_prime_UTR
ATCAGCAGCTACTGTAAGAG+TGG 0.597915 3_3:+69790135 Msa0468210:five_prime_UTR
ATTTCGATGGAAATGGACCC+GGG 0.599512 3_3:+69789367 Msa0468210:five_prime_UTR
GTACTCTGTAACTGCAAGGA+TGG 0.599565 3_3:+69795593 Msa0468210:CDS
GTAAGCTGAAGAAGGGGTGA+TGG 0.604094 3_3:-69789056 None:intergenic
GATTGTGTCTCAGAAGGCAA+TGG 0.604210 3_3:-69790051 None:intergenic
GGAGTGAATAGAGTTTCTCT+GGG 0.605409 3_3:+69789430 Msa0468210:five_prime_UTR
CACATTTCACCAGTCTGATG+AGG 0.607000 3_3:-69789586 None:intergenic
AATGTTAACAGGTATTCACC+AGG 0.607528 3_3:+69790021 Msa0468210:intron
TGAAAGTGCTGAAATTTCGA+TGG 0.611357 3_3:+69789354 Msa0468210:five_prime_UTR
TGGTTTGGATGAGGTTCATG+AGG 0.613397 3_3:+69789501 Msa0468210:five_prime_UTR
GTTGTTGAAGAGTTGTGGGA+GGG 0.619959 3_3:+69789474 Msa0468210:five_prime_UTR
TCTTACAATCAAACGTACCC+GGG 0.621772 3_3:-69789384 None:intergenic
GGCAGCGTTTACGACAGAAA+GGG 0.622614 3_3:-69789087 None:intergenic
CGGAGCCGAGAGCGACGATG+GGG 0.623355 3_3:-69789123 None:intergenic
ATACTTGGAGGAACCAGGGA+CGG 0.624368 3_3:-69789286 None:intergenic
TATGATCTGCAAATTGAACA+AGG 0.624447 3_3:+69789661 Msa0468210:five_prime_UTR
GGACTCTGGAGATAGAGATG+TGG 0.627654 3_3:+69792310 Msa0468210:CDS
ATAGGTACTCTGTAACTGCA+AGG 0.630839 3_3:+69795589 Msa0468210:intron
TGATGACAACATTAATAGCA+AGG 0.635250 3_3:+69790326 Msa0468210:five_prime_UTR
TGAATGTAGTTTATGACACG+CGG 0.644338 3_3:-69789169 None:intergenic
GTGAATGTAAGCTGAAGAAG+GGG 0.649743 3_3:-69789062 None:intergenic
TCATCAGACTGGTGAAATGT+GGG 0.649858 3_3:+69789588 Msa0468210:five_prime_UTR
AACCATACTTGGAGGAACCA+GGG 0.649992 3_3:-69789290 None:intergenic
GATGTGAATACGGGACAATG+TGG 0.657530 3_3:+69792137 Msa0468210:CDS
AGCGTTTACGACAGAAAGGG+AGG 0.660387 3_3:-69789084 None:intergenic
CAGAGTCCAGATTAGAACAG+TGG 0.663351 3_3:-69792295 None:intergenic
CGATGGGGAAGTCACAGTAG+TGG 0.663567 3_3:-69789108 None:intergenic
CAATAAAACTAGTAGAGCCG+AGG 0.664303 3_3:-69790215 None:intergenic
TGTTAACAGGTATTCACCAG+GGG 0.672471 3_3:+69790023 Msa0468210:intron
ATGTTAACAGGTATTCACCA+GGG 0.678250 3_3:+69790022 Msa0468210:intron
TCAGACTGGTGAAATGTGGG+AGG 0.678428 3_3:+69789591 Msa0468210:five_prime_UTR
GACATTGAAGATGAAATTTG+GGG 0.678951 3_3:+69789327 Msa0468210:five_prime_UTR
TTATGTTGAGAGTGGACATG+TGG 0.679713 3_3:+69790467 Msa0468210:five_prime_UTR
GAATGTAGTTTATGACACGC+GGG 0.684399 3_3:-69789168 None:intergenic
ATGTGAATACGGGACAATGT+GGG 0.690805 3_3:+69792138 Msa0468210:CDS
AACTGACTTAGAAAAGAGAG+TGG 0.701765 3_3:+69790554 Msa0468210:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTAAAAAAAAAAAT+GGG - chr3_3:69791302-69791321 None:intergenic 0.0%
!!! ATTTTTTGGTTTAATTTTTA+AGG + chr3_3:69789957-69789976 Msa0468210:intron 10.0%
!!! GAAAATTTTATTAATTAAAG+TGG - chr3_3:69791268-69791287 None:intergenic 10.0%
!!! ATTTCTATATTTTCTTTTTA+AGG + chr3_3:69791946-69791965 Msa0468210:intron 10.0%
!!! TTTCTATATTTTCTTTTTAA+GGG + chr3_3:69791947-69791966 Msa0468210:intron 10.0%
!!! TAAATAACTTTAATTTCTTT+AGG - chr3_3:69792106-69792125 None:intergenic 10.0%
!! AATAGTATATTAACATATTT+AGG - chr3_3:69792901-69792920 None:intergenic 10.0%
!! AAATTCAAATAAATATTTAG+AGG - chr3_3:69793835-69793854 None:intergenic 10.0%
!!! TTAAATGATTACATTTTTTA+TGG + chr3_3:69793868-69793887 Msa0468210:intron 10.0%
!! AATTTAGATAACTAAAATAT+GGG - chr3_3:69794433-69794452 None:intergenic 10.0%
!! TAATTTAGATAACTAAAATA+TGG - chr3_3:69794434-69794453 None:intergenic 10.0%
!! TATAATAGTAATTATGTTAA+TGG - chr3_3:69795700-69795719 None:intergenic 10.0%
!! AAGTAAATACAAATAATAAG+TGG - chr3_3:69789862-69789881 None:intergenic 15.0%
!!! ACAAGAAGTATAAAAAAAAT+CGG - chr3_3:69791095-69791114 None:intergenic 15.0%
!! CTGAAAGAAAAATATAAAAT+CGG - chr3_3:69792366-69792385 None:intergenic 15.0%
!!! TTTAAATTTTGTCTTGAAAA+AGG + chr3_3:69792433-69792452 Msa0468210:intron 15.0%
!!! TATTTTTATACATACTTTAC+TGG + chr3_3:69792874-69792893 Msa0468210:intron 15.0%
!!! CATTTTGTAATTTTTTAACA+AGG - chr3_3:69793628-69793647 None:intergenic 15.0%
!! GTTAAAAAATTACAAAATGT+TGG + chr3_3:69793629-69793648 Msa0468210:intron 15.0%
!! CATTTAACGAATAATTTAAT+GGG - chr3_3:69793798-69793817 None:intergenic 15.0%
!! AAAATAAAATAAATAAGACC+AGG - chr3_3:69793894-69793913 None:intergenic 15.0%
!!! TTTGAAATTTTATGTATTGA+TGG + chr3_3:69794495-69794514 Msa0468210:intron 15.0%
!! TTAATTATAACTCATTTCTT+TGG + chr3_3:69795724-69795743 Msa0468210:intron 15.0%
!!! TTTAATTTGTTGTCATTATT+TGG + chr3_3:69795906-69795925 Msa0468210:three_prime_UTR 15.0%
!!! TTGAAAAAGTGTTTGTTATT+AGG - chr3_3:69788985-69789004 None:intergenic 20.0%
!! ATTGATATAGTTAAAAAGTG+TGG + chr3_3:69789526-69789545 Msa0468210:five_prime_UTR 20.0%
!!! TTGATATAGTTAAAAAGTGT+GGG + chr3_3:69789527-69789546 Msa0468210:five_prime_UTR 20.0%
!! TAATAAGTAATATTCCTAAC+AGG + chr3_3:69789799-69789818 Msa0468210:intron 20.0%
!!! TTATAATGATGATGATGATT+TGG + chr3_3:69789984-69790003 Msa0468210:intron 20.0%
!! GATTTCATAATGGTTATAAT+TGG - chr3_3:69790118-69790137 None:intergenic 20.0%
!! CTATTAACTCATTTGATAAA+AGG - chr3_3:69790611-69790630 None:intergenic 20.0%
!!! CAAGAAGTATAAAAAAAATC+GGG - chr3_3:69791094-69791113 None:intergenic 20.0%
!! TTAAAAAAAAAAATGGGGAA+GGG - chr3_3:69791296-69791315 None:intergenic 20.0%
!! TTTAAAAAAAAAAATGGGGA+AGG - chr3_3:69791297-69791316 None:intergenic 20.0%
!!! TATATACTTTTTTGGTTTAG+AGG - chr3_3:69791631-69791650 None:intergenic 20.0%
!!! AGGTTTCATATATACTTTTT+TGG - chr3_3:69791639-69791658 None:intergenic 20.0%
!!! TATATTTTCTTTTTAAGGGA+TGG + chr3_3:69791951-69791970 Msa0468210:intron 20.0%
!! TTAATTGCAATTTATAGATG+TGG + chr3_3:69792598-69792617 Msa0468210:intron 20.0%
!! ATTTGAACTTGATCAATTTA+AGG + chr3_3:69792845-69792864 Msa0468210:CDS 20.0%
!!! ACAAAATTAGCTTCTTATAA+GGG - chr3_3:69793116-69793135 None:intergenic 20.0%
!!! AACAAAATTAGCTTCTTATA+AGG - chr3_3:69793117-69793136 None:intergenic 20.0%
!!! TTAGTATTTTTGTTTCTTGT+TGG + chr3_3:69793304-69793323 Msa0468210:intron 20.0%
!!! TTTTTTCTTTTGCTACATTA+TGG + chr3_3:69793438-69793457 Msa0468210:intron 20.0%
!!! TTTTTCTTTTGCTACATTAT+GGG + chr3_3:69793439-69793458 Msa0468210:intron 20.0%
!! AAATGTAGCAAAAGAAATAT+AGG - chr3_3:69793491-69793510 None:intergenic 20.0%
!! AGCATACAAGTAATATTTAA+TGG + chr3_3:69793659-69793678 Msa0468210:intron 20.0%
!! GCATTTAACGAATAATTTAA+TGG - chr3_3:69793799-69793818 None:intergenic 20.0%
!!! GTAATTCCTAAAGTTTTATA+TGG + chr3_3:69794144-69794163 Msa0468210:intron 20.0%
!!! AATTTTATGTATTGATGGTA+TGG + chr3_3:69794500-69794519 Msa0468210:intron 20.0%
!! TAGTGAAATATTTGTAGTTA+TGG + chr3_3:69794613-69794632 Msa0468210:intron 20.0%
!!! TGTTCAAAAGAACAATATTT+TGG + chr3_3:69795009-69795028 Msa0468210:intron 20.0%
!!! AAAACTAAAAAGTAATGGAT+TGG - chr3_3:69795120-69795139 None:intergenic 20.0%
!!! TTGAATATTTTAGTCAATTG+TGG + chr3_3:69795245-69795264 Msa0468210:intron 20.0%
!! AAATTTCCTTTAAACTTTCT+TGG - chr3_3:69795443-69795462 None:intergenic 20.0%
!!! AAAAAGTGTTTGTTATTAGG+CGG - chr3_3:69788982-69789001 None:intergenic 25.0%
! AGACATTGAAGATGAAATTT+GGG + chr3_3:69789326-69789345 Msa0468210:five_prime_UTR 25.0%
!! TGATATAGTTAAAAAGTGTG+GGG + chr3_3:69789528-69789547 Msa0468210:five_prime_UTR 25.0%
! TGTAACTTTATCGATGAAAT+TGG + chr3_3:69789904-69789923 Msa0468210:intron 25.0%
!!! TAGCAGCATTGATAATTTTT+TGG + chr3_3:69789943-69789962 Msa0468210:intron 25.0%
! TTTGATAAAAGGAAACCATT+TGG - chr3_3:69790600-69790619 None:intergenic 25.0%
!! AGATAGATAATCATGTTTTC+AGG - chr3_3:69790694-69790713 None:intergenic 25.0%
!! AGATAGATAATCATGTTTTC+AGG - chr3_3:69790694-69790713 None:intergenic 25.0%
! TTGTATATGAATTGCAGAAA+AGG + chr3_3:69790802-69790821 Msa0468210:intron 25.0%
! GAAACAAAAATAATCTACAC+CGG - chr3_3:69791006-69791025 None:intergenic 25.0%
! GGAAAATATTAAAACGTTCA+AGG - chr3_3:69791330-69791349 None:intergenic 25.0%
! TACTTATCAATGAGAAAGTT+CGG - chr3_3:69791369-69791388 None:intergenic 25.0%
! ACATGTTTGTGAATTGAAAA+AGG + chr3_3:69791455-69791474 Msa0468210:intron 25.0%
! CATGTTTGTGAATTGAAAAA+GGG + chr3_3:69791456-69791475 Msa0468210:intron 25.0%
! ATATGAAACCTATACGAATT+TGG + chr3_3:69791648-69791667 Msa0468210:intron 25.0%
! CAAAAAGAATAACCTTGTAA+TGG - chr3_3:69791732-69791751 None:intergenic 25.0%
!! CATTACAAGGTTATTCTTTT+TGG + chr3_3:69791730-69791749 Msa0468210:intron 25.0%
!!! TTTCTTTTCTAGTGAATGTT+AGG + chr3_3:69791911-69791930 Msa0468210:intron 25.0%
!!! TTTTTGGTTCTAGTTGTATT+TGG + chr3_3:69792066-69792085 Msa0468210:intron 25.0%
!!! TGGTATAGTCATTTTATTTC+TGG + chr3_3:69792251-69792270 Msa0468210:intron 25.0%
! AACTCAAGACAAACAAAAAT+GGG - chr3_3:69792391-69792410 None:intergenic 25.0%
! AAACTCAAGACAAACAAAAA+TGG - chr3_3:69792392-69792411 None:intergenic 25.0%
! TGTCTTGAGTTTACATAATT+TGG + chr3_3:69792400-69792419 Msa0468210:intron 25.0%
! AATTTCAGAAGGTTTCTATA+TGG - chr3_3:69792523-69792542 None:intergenic 25.0%
! ACTAAATGACAAATTTCAGA+AGG - chr3_3:69792534-69792553 None:intergenic 25.0%
!! TGTCATTTAGTTGATTGTTA+TGG + chr3_3:69792543-69792562 Msa0468210:intron 25.0%
! ATCTAGATGTGAAATCTAAA+CGG - chr3_3:69792713-69792732 None:intergenic 25.0%
!!! TTGGTATTGATTCACTTAAT+TGG + chr3_3:69792794-69792813 Msa0468210:intron 25.0%
!! CAAAATTAGCTTCTTATAAG+GGG - chr3_3:69793115-69793134 None:intergenic 25.0%
!! GATAAATAAAAGCATAACTG+TGG - chr3_3:69793149-69793168 None:intergenic 25.0%
! TTGTATATGGGAAAATTTGA+TGG - chr3_3:69793177-69793196 None:intergenic 25.0%
! TCAAACAGTACATTGTATAT+GGG - chr3_3:69793189-69793208 None:intergenic 25.0%
! ATCAAACAGTACATTGTATA+TGG - chr3_3:69793190-69793209 None:intergenic 25.0%
! CAAAAATACTAATTGAAGCT+CGG - chr3_3:69793296-69793315 None:intergenic 25.0%
! TAGCAAAAGAAATATAGGAA+AGG - chr3_3:69793486-69793505 None:intergenic 25.0%
!! AATCTTCCTGTTATGTATTT+TGG + chr3_3:69793543-69793562 Msa0468210:intron 25.0%
!!! GTAATTTTTTAACAAGGACT+TGG - chr3_3:69793622-69793641 None:intergenic 25.0%
! AAGCAAATAAGAATGATTAG+CGG - chr3_3:69793773-69793792 None:intergenic 25.0%
! ATGGAGATTTGTATACTTTA+GGG + chr3_3:69794211-69794230 Msa0468210:intron 25.0%
!! CAAGTTTTCAATTAAACAGA+AGG + chr3_3:69794584-69794603 Msa0468210:intron 25.0%
! ATCAAAAAGTTCGTAAGTTA+TGG + chr3_3:69794641-69794660 Msa0468210:intron 25.0%
! AACCAATTTACCAATGAAAT+GGG - chr3_3:69794724-69794743 None:intergenic 25.0%
! TAACCAATTTACCAATGAAA+TGG - chr3_3:69794725-69794744 None:intergenic 25.0%
! TTGCATTATAATGTCAACAA+AGG - chr3_3:69794845-69794864 None:intergenic 25.0%
! GAATATATGTTGCTCAAATT+TGG + chr3_3:69794866-69794885 Msa0468210:intron 25.0%
! CAGCTAAAACTAAAAAGTAA+TGG - chr3_3:69795125-69795144 None:intergenic 25.0%
! AATAATCACTCATTCTATAG+AGG + chr3_3:69795351-69795370 Msa0468210:intron 25.0%
! TCTTTACTATTAAAGTAGAG+AGG - chr3_3:69795518-69795537 None:intergenic 25.0%
! TAAAAATACACTCATGATTG+TGG + chr3_3:69795550-69795569 Msa0468210:intron 25.0%
! ATCACATCATTACCTAAAAT+TGG + chr3_3:69795664-69795683 Msa0468210:intron 25.0%
!!! TGACAATTTTATTTACTTCC+AGG + chr3_3:69795845-69795864 Msa0468210:three_prime_UTR 25.0%
!! AAAAGTGTTTGTTATTAGGC+GGG - chr3_3:69788981-69789000 None:intergenic 30.0%
GTGTCATAAACTACATTCAA+TGG + chr3_3:69789173-69789192 Msa0468210:five_prime_UTR 30.0%
GAGACATTGAAGATGAAATT+TGG + chr3_3:69789325-69789344 Msa0468210:five_prime_UTR 30.0%
GACATTGAAGATGAAATTTG+GGG + chr3_3:69789327-69789346 Msa0468210:five_prime_UTR 30.0%
TACGTTTGATTGTAAGAAGA+TGG + chr3_3:69789390-69789409 Msa0468210:five_prime_UTR 30.0%
TCATAAACAGAAACATGAGT+TGG - chr3_3:69789646-69789665 None:intergenic 30.0%
TATGATCTGCAAATTGAACA+AGG + chr3_3:69789661-69789680 Msa0468210:five_prime_UTR 30.0%
ATTGAACAAGGCACAAAATT+TGG + chr3_3:69789673-69789692 Msa0468210:five_prime_UTR 30.0%
TAGTCGCTAGTGTAAAATAT+AGG - chr3_3:69789715-69789734 None:intergenic 30.0%
GAGTGACAAAATAGGAAAAA+GGG - chr3_3:69789766-69789785 None:intergenic 30.0%
ATTTACTCGAGTGACAAAAT+AGG - chr3_3:69789774-69789793 None:intergenic 30.0%
TATTTACTTAAGCGACAAGA+CGG + chr3_3:69789873-69789892 Msa0468210:intron 30.0%
AACTTTATCGATGAAATTGG+TGG + chr3_3:69789907-69789926 Msa0468210:intron 30.0%
! ATTTTTATACGATGGCTTCA+AGG + chr3_3:69790079-69790098 Msa0468210:five_prime_UTR 30.0%
TGATGACAACATTAATAGCA+AGG + chr3_3:69790326-69790345 Msa0468210:five_prime_UTR 30.0%
TATAAACCTTATGTTGAGAG+TGG + chr3_3:69790459-69790478 Msa0468210:five_prime_UTR 30.0%
! TTCTTGTTTAACACACTTTG+AGG + chr3_3:69791108-69791127 Msa0468210:intron 30.0%
! ATTAATTAAAGTGGCACTGA+TGG - chr3_3:69791259-69791278 None:intergenic 30.0%
CTTTCTCATTGATAAGTAGA+TGG + chr3_3:69791371-69791390 Msa0468210:intron 30.0%
TCACATAATCACAGATATGT+TGG - chr3_3:69791407-69791426 None:intergenic 30.0%
!! TTCTTGTTATTGCTATCTTC+AGG + chr3_3:69791431-69791450 Msa0468210:intron 30.0%
ACAAAACACCAAATTCGTAT+AGG - chr3_3:69791659-69791678 None:intergenic 30.0%
TTTGTCTTCATCACATGATT+TGG + chr3_3:69791674-69791693 Msa0468210:intron 30.0%
!! TTTTCTAGTGAATGTTAGGT+TGG + chr3_3:69791915-69791934 Msa0468210:intron 30.0%
GACTATCATACACACAAAAA+TGG - chr3_3:69791995-69792014 None:intergenic 30.0%
! GGATTTTTCTTCCATCTTTT+TGG + chr3_3:69792050-69792069 Msa0468210:intron 30.0%
TACAACTAGAACCAAAAAGA+TGG - chr3_3:69792064-69792083 None:intergenic 30.0%
! GTTCTAGTTGTATTTGGAAT+GGG + chr3_3:69792072-69792091 Msa0468210:intron 30.0%
AAACTATTAAAAGTAGCGAG+AGG + chr3_3:69792212-69792231 Msa0468210:intron 30.0%
AACTATTAAAAGTAGCGAGA+GGG + chr3_3:69792213-69792232 Msa0468210:intron 30.0%
!! TTGAAAAAGGCATTATCCAT+AGG + chr3_3:69792446-69792465 Msa0468210:intron 30.0%
GATAACATACAATGATAGAG+AGG - chr3_3:69792687-69792706 None:intergenic 30.0%
!!! ATTCACTTAATTGGTTTTGC+AGG + chr3_3:69792803-69792822 Msa0468210:intron 30.0%
AGAAATAATTGGAAGCTATG+TGG + chr3_3:69793027-69793046 Msa0468210:intron 30.0%
! GTATTTTACTCTCATCATCT+TGG - chr3_3:69793088-69793107 None:intergenic 30.0%
TCTGTATGCATACAAGTAAT+TGG + chr3_3:69793357-69793376 Msa0468210:intron 30.0%
CAAAAGAAATATAGGAAAGG+AGG - chr3_3:69793483-69793502 None:intergenic 30.0%
CATTTCAGTTTGCAAAAAGA+TGG - chr3_3:69793705-69793724 None:intergenic 30.0%
!!! TGATTACATTTTTTATGGCC+TGG + chr3_3:69793873-69793892 Msa0468210:intron 30.0%
TAGAGACTAAATAGAAGAGA+GGG - chr3_3:69794110-69794129 None:intergenic 30.0%
TTAGAGACTAAATAGAAGAG+AGG - chr3_3:69794111-69794130 None:intergenic 30.0%
! TATGTATTGACAAGACACTA+GGG - chr3_3:69794173-69794192 None:intergenic 30.0%
! TTATGTATTGACAAGACACT+AGG - chr3_3:69794174-69794193 None:intergenic 30.0%
GATGGAGATTTGTATACTTT+AGG + chr3_3:69794210-69794229 Msa0468210:intron 30.0%
CTTGAAATTAACACACAAAC+AGG - chr3_3:69794568-69794587 None:intergenic 30.0%
! ACTTTGACCATTTTGCATAT+TGG - chr3_3:69794669-69794688 None:intergenic 30.0%
AAAATGGTCAAAGTTCAAGA+TGG + chr3_3:69794675-69794694 Msa0468210:intron 30.0%
ACCAATTTACCAATGAAATG+GGG - chr3_3:69794723-69794742 None:intergenic 30.0%
GCAAAGGGCAAAAAATTTAA+GGG - chr3_3:69794928-69794947 None:intergenic 30.0%
AGCAAAGGGCAAAAAATTTA+AGG - chr3_3:69794929-69794948 None:intergenic 30.0%
CAGGTAAAAACAAAAGCAAA+GGG - chr3_3:69794943-69794962 None:intergenic 30.0%
TCAGGTAAAAACAAAAGCAA+AGG - chr3_3:69794944-69794963 None:intergenic 30.0%
TTTACCTGAAATAAAGCTTC+TGG + chr3_3:69794955-69794974 Msa0468210:intron 30.0%
TCAAAACTTTACCCTAACTA+AGG - chr3_3:69794983-69795002 None:intergenic 30.0%
!!! AAGAACAATATTTTGGAGTG+AGG + chr3_3:69795016-69795035 Msa0468210:intron 30.0%
!!! AGAACAATATTTTGGAGTGA+GGG + chr3_3:69795017-69795036 Msa0468210:intron 30.0%
!! TTTAGCTGATTTTACCTTCT+TGG + chr3_3:69795137-69795156 Msa0468210:intron 30.0%
TAATACACATTTGTCAGTTG+TGG + chr3_3:69795201-69795220 Msa0468210:intron 30.0%
AATACACATTTGTCAGTTGT+GGG + chr3_3:69795202-69795221 Msa0468210:intron 30.0%
! GACTAAGGATTTGGTTATTT+GGG + chr3_3:69795293-69795312 Msa0468210:intron 30.0%
! ACTAAGGATTTGGTTATTTG+GGG + chr3_3:69795294-69795313 Msa0468210:intron 30.0%
TGATTGTGGTGAAATTCTTA+TGG + chr3_3:69795564-69795583 Msa0468210:intron 30.0%
GGTGAAATTCTTATGGTAAT+AGG + chr3_3:69795571-69795590 Msa0468210:intron 30.0%
! TTTTCTTCTGCCTCTTTTAT+TGG - chr3_3:69795817-69795836 None:intergenic 30.0%
!! ATTTTATTTACTTCCAGGCT+AGG + chr3_3:69795850-69795869 Msa0468210:three_prime_UTR 30.0%
!! TTTTATTTACTTCCAGGCTA+GGG + chr3_3:69795851-69795870 Msa0468210:three_prime_UTR 30.0%
GAAAATCACATCATTCTTTG+TGG - chr3_3:69795879-69795898 None:intergenic 30.0%
ATGAATTTCTTCCCCAAAAT+CGG + chr3_3:69796032-69796051 Msa0468210:three_prime_UTR 30.0%
!! GTTAGCTCTTCATTTTTAGA+TGG - chr3_3:69796068-69796087 None:intergenic 30.0%
TGAATGTAGTTTATGACACG+CGG - chr3_3:69789172-69789191 None:intergenic 35.0%
!! TGAAAGTGCTGAAATTTCGA+TGG + chr3_3:69789354-69789373 Msa0468210:five_prime_UTR 35.0%
TGCTGAAATTTCGATGGAAA+TGG + chr3_3:69789360-69789379 Msa0468210:five_prime_UTR 35.0%
TTCTTACAATCAAACGTACC+CGG - chr3_3:69789388-69789407 None:intergenic 35.0%
ATGGAAGAGATGATGTTGTT+GGG + chr3_3:69789409-69789428 Msa0468210:five_prime_UTR 35.0%
AGAAGTTGTTGAAGAGTTGT+GGG + chr3_3:69789470-69789489 Msa0468210:five_prime_UTR 35.0%
AAATGTGGGAGGAAAGTTTA+AGG + chr3_3:69789602-69789621 Msa0468210:five_prime_UTR 35.0%
AACAAGGCACAAAATTTGGA+AGG + chr3_3:69789677-69789696 Msa0468210:five_prime_UTR 35.0%
AAAATTTGGAAGGCTGTAAG+TGG + chr3_3:69789687-69789706 Msa0468210:intron 35.0%
CGAGTGACAAAATAGGAAAA+AGG - chr3_3:69789767-69789786 None:intergenic 35.0%
CTGAAGGTGAAAATGTTAAC+AGG + chr3_3:69790010-69790029 Msa0468210:intron 35.0%
AATGTTAACAGGTATTCACC+AGG + chr3_3:69790021-69790040 Msa0468210:intron 35.0%
ATGTTAACAGGTATTCACCA+GGG + chr3_3:69790022-69790041 Msa0468210:intron 35.0%
!!! ATCCGCTGATTTTTATACGA+TGG + chr3_3:69790071-69790090 Msa0468210:five_prime_UTR 35.0%
AGCCATCGTATAAAAATCAG+CGG - chr3_3:69790076-69790095 None:intergenic 35.0%
!! AGTAGCTGCTGATTTCATAA+TGG - chr3_3:69790128-69790147 None:intergenic 35.0%
GTAGACACAACTTTACCTAT+TGG + chr3_3:69790166-69790185 Msa0468210:five_prime_UTR 35.0%
!!! CTAGTTTTATTGGTGGTTTG+AGG + chr3_3:69790226-69790245 Msa0468210:five_prime_UTR 35.0%
GAATGAGTACATGAAATTCG+TGG + chr3_3:69790269-69790288 Msa0468210:five_prime_UTR 35.0%
CATGAAATTCGTGGAAAATC+TGG + chr3_3:69790278-69790297 Msa0468210:five_prime_UTR 35.0%
TTCGTGGAAAATCTGGAAAA+TGG + chr3_3:69790285-69790304 Msa0468210:five_prime_UTR 35.0%
TAATAGCAAGGACAAAGCAT+TGG + chr3_3:69790338-69790357 Msa0468210:five_prime_UTR 35.0%
AAGCGTTACCAAGAATCATT+TGG + chr3_3:69790405-69790424 Msa0468210:five_prime_UTR 35.0%
! CGACATCAACAATTCTCTTT+TGG + chr3_3:69790527-69790546 Msa0468210:five_prime_UTR 35.0%
! AACTGACTTAGAAAAGAGAG+TGG + chr3_3:69790554-69790573 Msa0468210:five_prime_UTR 35.0%
!! AGTTAATAGCCCTTGCTTTT+GGG + chr3_3:69790622-69790641 Msa0468210:five_prime_UTR 35.0%
! ATAGCCTTTTCTGCAATTCA+CGG - chr3_3:69790879-69790898 None:intergenic 35.0%
AAAAATAATCTACACCGGTG+AGG - chr3_3:69791001-69791020 None:intergenic 35.0%
AAAAAAAATGGGGAAGGGAA+GGG - chr3_3:69791291-69791310 None:intergenic 35.0%
AAAAAAAAATGGGGAAGGGA+AGG - chr3_3:69791292-69791311 None:intergenic 35.0%
ATCAATGAGAAAGTTCGGAT+AGG - chr3_3:69791364-69791383 None:intergenic 35.0%
TAATCACAGATATGTTGGAG+TGG - chr3_3:69791402-69791421 None:intergenic 35.0%
TTGTGAATTGAAAAAGGGTG+TGG + chr3_3:69791461-69791480 Msa0468210:intron 35.0%
! TGTGAATTGAAAAAGGGTGT+GGG + chr3_3:69791462-69791481 Msa0468210:intron 35.0%
GCAGGTATTATACCATTACA+AGG + chr3_3:69791717-69791736 Msa0468210:intron 35.0%
ATGATACACTTAGAGAAGTG+AGG + chr3_3:69791761-69791780 Msa0468210:intron 35.0%
ATCTGATGAAAAACTTGCCA+GGG + chr3_3:69791837-69791856 Msa0468210:intron 35.0%
ACAGAAGTTACAGACTTCTT+TGG + chr3_3:69791884-69791903 Msa0468210:intron 35.0%
TGTGGTTTAGTGAACTTTCA+TGG + chr3_3:69792028-69792047 Msa0468210:intron 35.0%
GTGGTTTAGTGAACTTTCAT+GGG + chr3_3:69792029-69792048 Msa0468210:intron 35.0%
! GGTTCTAGTTGTATTTGGAA+TGG + chr3_3:69792071-69792090 Msa0468210:intron 35.0%
TAGCAAGCATGATGTGAATA+CGG + chr3_3:69792127-69792146 Msa0468210:CDS 35.0%
! TCAGTTGGGAATTTTGTTAG+AGG + chr3_3:69792189-69792208 Msa0468210:intron 35.0%
GGTGATCATGGAATTTCTTT+AGG - chr3_3:69792277-69792296 None:intergenic 35.0%
ACACTAAGTGCTAATTCCTA+TGG - chr3_3:69792465-69792484 None:intergenic 35.0%
AATTAGCACTTAGTGTTCAG+AGG + chr3_3:69792469-69792488 Msa0468210:intron 35.0%
!!! TCAACTGAAGTGTTGTTTTG+TGG + chr3_3:69792574-69792593 Msa0468210:intron 35.0%
TCTTCACATGTGAGAGTTAA+AGG + chr3_3:69792735-69792754 Msa0468210:intron 35.0%
GATCAGTCTCTAATGGTAAA+TGG - chr3_3:69792773-69792792 None:intergenic 35.0%
TACCATTAGAGACTGATCAT+TGG + chr3_3:69792775-69792794 Msa0468210:intron 35.0%
TACCAATGATCAGTCTCTAA+TGG - chr3_3:69792780-69792799 None:intergenic 35.0%
CTACAGCTGCAAGAAATAAT+TGG + chr3_3:69793016-69793035 Msa0468210:intron 35.0%
CATCTTGGTAAACAAGTGAT+TGG - chr3_3:69793073-69793092 None:intergenic 35.0%
AAATACTAATTGAAGCTCGG+AGG - chr3_3:69793293-69793312 None:intergenic 35.0%
GCATACAAGTAATTGGCAAA+TGG + chr3_3:69793364-69793383 Msa0468210:intron 35.0%
!! CTTCCTGTTATGTATTTTGG+AGG + chr3_3:69793546-69793565 Msa0468210:intron 35.0%
GTTCCTCCAAAATACATAAC+AGG - chr3_3:69793552-69793571 None:intergenic 35.0%
TAATGGAGACTATATAACCC+TGG + chr3_3:69793676-69793695 Msa0468210:intron 35.0%
!! AATGATTAGCGGATTAGTCA+TGG - chr3_3:69793762-69793781 None:intergenic 35.0%
ATGCTTAAGGGACAAAATTG+GGG - chr3_3:69794085-69794104 None:intergenic 35.0%
GATGCTTAAGGGACAAAATT+GGG - chr3_3:69794086-69794105 None:intergenic 35.0%
TGATGCTTAAGGGACAAAAT+TGG - chr3_3:69794087-69794106 None:intergenic 35.0%
GGGACTCCATATAAAACTTT+AGG - chr3_3:69794153-69794172 None:intergenic 35.0%
AACATCAAGAACTAACGAGA+TGG + chr3_3:69794192-69794211 Msa0468210:intron 35.0%
TGGTATGGTTATCATACAGA+TGG + chr3_3:69794515-69794534 Msa0468210:intron 35.0%
! TATGGTGCCAATATGCAAAA+TGG + chr3_3:69794659-69794678 Msa0468210:intron 35.0%
AATTTACCAATGAAATGGGG+GGG - chr3_3:69794720-69794739 None:intergenic 35.0%
CAATTTACCAATGAAATGGG+GGG - chr3_3:69794721-69794740 None:intergenic 35.0%
CCAATTTACCAATGAAATGG+GGG - chr3_3:69794722-69794741 None:intergenic 35.0%
!! AACTAAAGCATTTTCCCATC+AGG - chr3_3:69794796-69794815 None:intergenic 35.0%
TGATGGGAAAATGCTTTAGT+TGG + chr3_3:69794795-69794814 Msa0468210:intron 35.0%
GAATGAATTCAATGAATGCC+TGG - chr3_3:69795058-69795077 None:intergenic 35.0%
!! CATAAATGGATTGTTGGTAC+AGG - chr3_3:69795082-69795101 None:intergenic 35.0%
TACCAACAATCCATTTATGC+AGG + chr3_3:69795083-69795102 Msa0468210:intron 35.0%
! AAAAACCTCTGAAAGGACTA+AGG + chr3_3:69795278-69795297 Msa0468210:intron 35.0%
! GGACTAAGGATTTGGTTATT+TGG + chr3_3:69795292-69795311 Msa0468210:intron 35.0%
! TCTATAGAGGTCGAATTTTG+TGG + chr3_3:69795364-69795383 Msa0468210:intron 35.0%
! CTATAGAGGTCGAATTTTGT+GGG + chr3_3:69795365-69795384 Msa0468210:intron 35.0%
AAACTTTCTTGGCACAACTT+AGG - chr3_3:69795432-69795451 None:intergenic 35.0%
GTTGTGCCAAGAAAGTTTAA+AGG + chr3_3:69795434-69795453 Msa0468210:intron 35.0%
GGAACTTAAAATAGAGCTAG+AGG - chr3_3:69795497-69795516 None:intergenic 35.0%
!!! CAAGGATGGTTTTGATTTTG+CGG + chr3_3:69795607-69795626 Msa0468210:CDS 35.0%
!!! GGTTTTTAGCTGCCAATTTT+AGG - chr3_3:69795679-69795698 None:intergenic 35.0%
!! CTTTTATTGGCACTAGTTTC+AGG - chr3_3:69795804-69795823 None:intergenic 35.0%
GAAACTAGTGCCAATAAAAG+AGG + chr3_3:69795804-69795823 Msa0468210:CDS 35.0%
GTTGTCATTATTTGGAGAGA+TGG + chr3_3:69795914-69795933 Msa0468210:three_prime_UTR 35.0%
!! GATTTTGGGGAAGAAATTCA+TGG - chr3_3:69796033-69796052 None:intergenic 35.0%
! GATTCTATACTCCGATTTTG+GGG - chr3_3:69796046-69796065 None:intergenic 35.0%
! GGATTCTATACTCCGATTTT+GGG - chr3_3:69796047-69796066 None:intergenic 35.0%
! TGGATTCTATACTCCGATTT+TGG - chr3_3:69796048-69796067 None:intergenic 35.0%
!! TTTGTTATTAGGCGGGTTGA+TGG - chr3_3:69788974-69788993 None:intergenic 40.0%
GTGAATGTAAGCTGAAGAAG+GGG - chr3_3:69789065-69789084 None:intergenic 40.0%
GGTGAATGTAAGCTGAAGAA+GGG - chr3_3:69789066-69789085 None:intergenic 40.0%
AGGTGAATGTAAGCTGAAGA+AGG - chr3_3:69789067-69789086 None:intergenic 40.0%
GAATGTAGTTTATGACACGC+GGG - chr3_3:69789171-69789190 None:intergenic 40.0%
AAAACCGTTCCAACCATACT+TGG - chr3_3:69789304-69789323 None:intergenic 40.0%
! AAGTATGGTTGGAACGGTTT+TGG + chr3_3:69789303-69789322 Msa0468210:five_prime_UTR 40.0%
AATTTCGATGGAAATGGACC+CGG + chr3_3:69789366-69789385 Msa0468210:five_prime_UTR 40.0%
TCTTACAATCAAACGTACCC+GGG - chr3_3:69789387-69789406 None:intergenic 40.0%
GATGGAAGAGATGATGTTGT+TGG + chr3_3:69789408-69789427 Msa0468210:five_prime_UTR 40.0%
GGAGTGAATAGAGTTTCTCT+GGG + chr3_3:69789430-69789449 Msa0468210:five_prime_UTR 40.0%
GAGAAGTTGTTGAAGAGTTG+TGG + chr3_3:69789469-69789488 Msa0468210:five_prime_UTR 40.0%
! AAAAGTGTGGGGTTGAGAAT+TGG + chr3_3:69789539-69789558 Msa0468210:five_prime_UTR 40.0%
TCATCAGACTGGTGAAATGT+GGG + chr3_3:69789588-69789607 Msa0468210:five_prime_UTR 40.0%
! AGGAAAAAGGGTGTGAGTTT+AGG - chr3_3:69789754-69789773 None:intergenic 40.0%
TTTGTCACATTCGTCCTGTT+AGG - chr3_3:69789816-69789835 None:intergenic 40.0%
CGAATGTGACAAAACGCTAA+AGG + chr3_3:69789823-69789842 Msa0468210:intron 40.0%
! GATGATGATTTGGAAGCTGA+AGG + chr3_3:69789994-69790013 Msa0468210:intron 40.0%
TGTTAACAGGTATTCACCAG+GGG + chr3_3:69790023-69790042 Msa0468210:intron 40.0%
GAAAGGCTTGTACTTCCAAT+AGG - chr3_3:69790184-69790203 None:intergenic 40.0%
TACAAGCCTTTCTATGCCTT+TGG + chr3_3:69790192-69790211 Msa0468210:five_prime_UTR 40.0%
CAATAAAACTAGTAGAGCCG+AGG - chr3_3:69790218-69790237 None:intergenic 40.0%
!!! CTCGGCTCTACTAGTTTTAT+TGG + chr3_3:69790216-69790235 Msa0468210:five_prime_UTR 40.0%
!!! GGCTCTACTAGTTTTATTGG+TGG + chr3_3:69790219-69790238 Msa0468210:five_prime_UTR 40.0%
ATGTACTCATTCACCTTCCT+GGG - chr3_3:69790261-69790280 None:intergenic 40.0%
ACATGTCCACTCTCAACATA+AGG - chr3_3:69790468-69790487 None:intergenic 40.0%
TTATGTTGAGAGTGGACATG+TGG + chr3_3:69790467-69790486 Msa0468210:five_prime_UTR 40.0%
AAAAGAGAGTGGCCTATATG+AGG + chr3_3:69790565-69790584 Msa0468210:five_prime_UTR 40.0%
TGGATCACTTAGCCTCATAT+AGG - chr3_3:69790580-69790599 None:intergenic 40.0%
ATGAGGCTAAGTGATCCAAA+TGG + chr3_3:69790582-69790601 Msa0468210:five_prime_UTR 40.0%
! GAGTTAATAGCCCTTGCTTT+TGG + chr3_3:69790621-69790640 Msa0468210:five_prime_UTR 40.0%
!! GTTAATAGCCCTTGCTTTTG+GGG + chr3_3:69790623-69790642 Msa0468210:five_prime_UTR 40.0%
GTCAATAACCCCAAAAGCAA+GGG - chr3_3:69790634-69790653 None:intergenic 40.0%
AGTCAATAACCCCAAAAGCA+AGG - chr3_3:69790635-69790654 None:intergenic 40.0%
!!! CTTTTGGGGTTATTGACTCT+TGG + chr3_3:69790637-69790656 Msa0468210:five_prime_UTR 40.0%
!!! CATGTTTTCAGGTAGCTTCT+TGG - chr3_3:69790683-69790702 None:intergenic 40.0%
!!! CATGTTTTCAGGTAGCTTCT+TGG - chr3_3:69790683-69790702 None:intergenic 40.0%
CATTCCGTGAATTGCAGAAA+AGG + chr3_3:69790872-69790891 Msa0468210:intron 40.0%
TGACTACTGTAGCTAAAACG+TGG + chr3_3:69791029-69791048 Msa0468210:intron 40.0%
CTTTGTACCTTGATGCTACA+AGG - chr3_3:69791204-69791223 None:intergenic 40.0%
! ATTTTACAACCGTCGTCAAG+GGG - chr3_3:69791234-69791253 None:intergenic 40.0%
! CATTTTACAACCGTCGTCAA+GGG - chr3_3:69791235-69791254 None:intergenic 40.0%
AAAAAAATGGGGAAGGGAAG+GGG - chr3_3:69791290-69791309 None:intergenic 40.0%
TTCGGATAGGATGAGAGATA+GGG - chr3_3:69791351-69791370 None:intergenic 40.0%
! GTGAATTGAAAAAGGGTGTG+GGG + chr3_3:69791463-69791482 Msa0468210:intron 40.0%
! ATCTGACTCGACCTATTAGT+TGG + chr3_3:69791575-69791594 Msa0468210:intron 40.0%
!! GACCTATTAGTTGGTGACTT+GGG + chr3_3:69791584-69791603 Msa0468210:intron 40.0%
!! ACCTATTAGTTGGTGACTTG+GGG + chr3_3:69791585-69791604 Msa0468210:intron 40.0%
! GAGGTATCCAAAAGTCACAT+TGG - chr3_3:69791612-69791631 None:intergenic 40.0%
ACCTGCAAATGAACCAAACA+AGG - chr3_3:69791703-69791722 None:intergenic 40.0%
ACTTAGAGAAGTGAGGTTGT+TGG + chr3_3:69791768-69791787 Msa0468210:intron 40.0%
CTTAGAGAAGTGAGGTTGTT+GGG + chr3_3:69791769-69791788 Msa0468210:intron 40.0%
! GCAAGTTTTTCATCAGATGC+AGG - chr3_3:69791835-69791854 None:intergenic 40.0%
CATCTGATGAAAAACTTGCC+AGG + chr3_3:69791836-69791855 Msa0468210:intron 40.0%
! TGTATTTGGAATGGGTGTGT+TGG + chr3_3:69792080-69792099 Msa0468210:CDS 40.0%
AGCAAGCATGATGTGAATAC+GGG + chr3_3:69792128-69792147 Msa0468210:CDS 40.0%
ATGTGAATACGGGACAATGT+GGG + chr3_3:69792138-69792157 Msa0468210:CDS 40.0%
!!! GGATTTTAAGTTGCAGCAAG+TGG + chr3_3:69792159-69792178 Msa0468210:CDS 40.0%
AAGTTGCAGCAAGTGGAATA+AGG + chr3_3:69792166-69792185 Msa0468210:CDS 40.0%
CAAGTGGAATAAGGTCAGTT+GGG + chr3_3:69792175-69792194 Msa0468210:intron 40.0%
TATTAAAAGTAGCGAGAGGG+AGG + chr3_3:69792216-69792235 Msa0468210:intron 40.0%
ATTAAAAGTAGCGAGAGGGA+GGG + chr3_3:69792217-69792236 Msa0468210:intron 40.0%
GATTAGAACAGTGGTGATCA+TGG - chr3_3:69792289-69792308 None:intergenic 40.0%
TGATCACCACTGTTCTAATC+TGG + chr3_3:69792289-69792308 Msa0468210:CDS 40.0%
ATCTGCACGACAATATTCTC+AGG + chr3_3:69792334-69792353 Msa0468210:CDS 40.0%
TTCTGTGACTAACACCAAAC+TGG + chr3_3:69792986-69793005 Msa0468210:intron 40.0%
TATGATTGTGTCTCGTTGTC+TGG + chr3_3:69793213-69793232 Msa0468210:intron 40.0%
CAACCAGACACAATCAAGAA+AGG - chr3_3:69793250-69793269 None:intergenic 40.0%
ATGCATACAGAAATCCCTCA+AGG - chr3_3:69793348-69793367 None:intergenic 40.0%
AGTGTGCTGAGTATGTTCAT+GGG - chr3_3:69793393-69793412 None:intergenic 40.0%
GAACAGAGAAAGAATCCAGT+TGG + chr3_3:69793568-69793587 Msa0468210:intron 40.0%
AGGAAAACAGAAAGACCAAC+TGG - chr3_3:69793586-69793605 None:intergenic 40.0%
! GACTTGGTCAATTTGAGATG+AGG - chr3_3:69793606-69793625 None:intergenic 40.0%
TTGCAAAAAGATGGAGTCCA+GGG - chr3_3:69793696-69793715 None:intergenic 40.0%
TTTGCAAAAAGATGGAGTCC+AGG - chr3_3:69793697-69793716 None:intergenic 40.0%
ATTTACCAATGAAATGGGGG+GGG - chr3_3:69794719-69794738 None:intergenic 40.0%
CCCCCATTTCATTGGTAAAT+TGG + chr3_3:69794719-69794738 Msa0468210:intron 40.0%
TTACTTACCTCTTCACCTGA+TGG + chr3_3:69794778-69794797 Msa0468210:intron 40.0%
TACTTACCTCTTCACCTGAT+GGG + chr3_3:69794779-69794798 Msa0468210:intron 40.0%
TGGGAAAATGCTTTAGTTGG+CGG + chr3_3:69794798-69794817 Msa0468210:intron 40.0%
CAACAATCCATTTATGCAGG+CGG + chr3_3:69795086-69795105 Msa0468210:intron 40.0%
CATGATAGCACAAACCAAGA+AGG - chr3_3:69795154-69795173 None:intergenic 40.0%
!! TTCAATAAGTACCGATTCCG+AGG - chr3_3:69795230-69795249 None:intergenic 40.0%
TGCACAGAAAAACCTCTGAA+AGG + chr3_3:69795271-69795290 Msa0468210:intron 40.0%
CAAATCCTTAGTCCTTTCAG+AGG - chr3_3:69795286-69795305 None:intergenic 40.0%
! CTCTGAAAGGACTAAGGATT+TGG + chr3_3:69795284-69795303 Msa0468210:intron 40.0%
! AAGGATTTGGTTATTTGGGG+TGG + chr3_3:69795297-69795316 Msa0468210:intron 40.0%
! GTTATTTGGGGTGGAAAACT+GGG + chr3_3:69795306-69795325 Msa0468210:intron 40.0%
ATAGGTACTCTGTAACTGCA+AGG + chr3_3:69795589-69795608 Msa0468210:intron 40.0%
CGGAAGTTCTATTCTTGAAG+AGG + chr3_3:69795627-69795646 Msa0468210:CDS 40.0%
GGCGCTAGTGCACAAAAAAA+GGG - chr3_3:69788941-69788960 None:intergenic 45.0%
!!! CGGGTTGATGGTTTTGGTTT+GGG - chr3_3:69788962-69788981 None:intergenic 45.0%
!!! ATTAGGCGGGTTGATGGTTT+TGG - chr3_3:69788968-69788987 None:intergenic 45.0%
!! GAGGAGTTTTGTCGAACAGT+TGG - chr3_3:69789016-69789035 None:intergenic 45.0%
!!! TGGGTTGTTTTTGAGTGAGG+AGG - chr3_3:69789035-69789054 None:intergenic 45.0%
!!! GGTTGGGTTGTTTTTGAGTG+AGG - chr3_3:69789038-69789057 None:intergenic 45.0%
GTCGTTTGTTTGCGTTGAAG+CGG - chr3_3:69789146-69789165 None:intergenic 45.0%
! TGGCTCTGCAGAGAAATCAA+TGG + chr3_3:69789193-69789212 Msa0468210:five_prime_UTR 45.0%
CCAAAAAACACCGTCTGAAG+CGG - chr3_3:69789256-69789275 None:intergenic 45.0%
!!! CTTCAGACGGTGTTTTTTGG+AGG + chr3_3:69789256-69789275 Msa0468210:five_prime_UTR 45.0%
!!! AGACGGTGTTTTTTGGAGGT+GGG + chr3_3:69789260-69789279 Msa0468210:five_prime_UTR 45.0%
AACCATACTTGGAGGAACCA+GGG - chr3_3:69789293-69789312 None:intergenic 45.0%
TCCTCCAAGTATGGTTGGAA+CGG + chr3_3:69789297-69789316 Msa0468210:five_prime_UTR 45.0%
ATTTCGATGGAAATGGACCC+GGG + chr3_3:69789367-69789386 Msa0468210:five_prime_UTR 45.0%
GGGAGTGAATAGAGTTTCTC+TGG + chr3_3:69789429-69789448 Msa0468210:five_prime_UTR 45.0%
AGTTGTTGAAGAGTTGTGGG+AGG + chr3_3:69789473-69789492 Msa0468210:five_prime_UTR 45.0%
GTTGTTGAAGAGTTGTGGGA+GGG + chr3_3:69789474-69789493 Msa0468210:five_prime_UTR 45.0%
! TGGTTTGGATGAGGTTCATG+AGG + chr3_3:69789501-69789520 Msa0468210:five_prime_UTR 45.0%
CACATTTCACCAGTCTGATG+AGG - chr3_3:69789589-69789608 None:intergenic 45.0%
CTCATCAGACTGGTGAAATG+TGG + chr3_3:69789587-69789606 Msa0468210:five_prime_UTR 45.0%
! AAGTTTAAGGCTCGCCATTG+AGG + chr3_3:69789615-69789634 Msa0468210:five_prime_UTR 45.0%
GATTGTGTCTCAGAAGGCAA+TGG - chr3_3:69790054-69790073 None:intergenic 45.0%
ATCAGCAGCTACTGTAAGAG+TGG + chr3_3:69790135-69790154 Msa0468210:five_prime_UTR 45.0%
!! GTTTGAGGTTTTCAAGACCC+AGG + chr3_3:69790241-69790260 Msa0468210:five_prime_UTR 45.0%
CATGTACTCATTCACCTTCC+TGG - chr3_3:69790262-69790281 None:intergenic 45.0%
!! TAGACCTCTTGCTGTTCTCA+AGG - chr3_3:69790379-69790398 None:intergenic 45.0%
GAGAGCTGCCAAATGATTCT+TGG - chr3_3:69790416-69790435 None:intergenic 45.0%
AGAATCATTTGGCAGCTCTC+TGG + chr3_3:69790416-69790435 Msa0468210:five_prime_UTR 45.0%
! GAGTGGACATGTGGTTTTCT+TGG + chr3_3:69790476-69790495 Msa0468210:five_prime_UTR 45.0%
! TGGTTTTCTTGGACGAGCAA+AGG + chr3_3:69790487-69790506 Msa0468210:five_prime_UTR 45.0%
!! TTGGGGTTATTGACTCTTGG+AGG + chr3_3:69790640-69790659 Msa0468210:five_prime_UTR 45.0%
!! TGGGGTTATTGACTCTTGGA+GGG + chr3_3:69790641-69790660 Msa0468210:five_prime_UTR 45.0%
GAATTGCAGAAAAGGCTGCA+AGG + chr3_3:69790810-69790829 Msa0468210:intron 45.0%
CCTAAGTTGTAAGTCCTCAC+CGG + chr3_3:69790984-69791003 Msa0468210:intron 45.0%
GAGCTAGCATCTCAAGTATG+TGG - chr3_3:69791165-69791184 None:intergenic 45.0%
TACTTGAGATGCTAGCTCAG+TGG + chr3_3:69791167-69791186 Msa0468210:intron 45.0%
!! AGCTTAGCCTTGTAGCATCA+AGG + chr3_3:69791194-69791213 Msa0468210:intron 45.0%
! CCATTTTACAACCGTCGTCA+AGG - chr3_3:69791236-69791255 None:intergenic 45.0%
CCTTGACGACGGTTGTAAAA+TGG + chr3_3:69791233-69791252 Msa0468210:intron 45.0%
GTTCGGATAGGATGAGAGAT+AGG - chr3_3:69791352-69791371 None:intergenic 45.0%
! GTTCATCTGACTCGACCTAT+TGG + chr3_3:69791514-69791533 Msa0468210:intron 45.0%
! ATCTGACTCGACCTATTGGT+TGG + chr3_3:69791518-69791537 Msa0468210:intron 45.0%
!! CGACCTATTAGTTGGTGACT+TGG + chr3_3:69791583-69791602 Msa0468210:intron 45.0%
ACCCCAAGTCACCAACTAAT+AGG - chr3_3:69791589-69791608 None:intergenic 45.0%
! TTGGGGTCCAATGTGACTTT+TGG + chr3_3:69791602-69791621 Msa0468210:intron 45.0%
!! CATGATTTGGTCGCCTTGTT+TGG + chr3_3:69791687-69791706 Msa0468210:intron 45.0%
!! GCCTTGTTTGGTTCATTTGC+AGG + chr3_3:69791699-69791718 Msa0468210:intron 45.0%
TAGTCGATGCACAGCATTTG+TGG + chr3_3:69792010-69792029 Msa0468210:intron 45.0%
GATGTGAATACGGGACAATG+TGG + chr3_3:69792137-69792156 Msa0468210:CDS 45.0%
GCAAGTGGAATAAGGTCAGT+TGG + chr3_3:69792174-69792193 Msa0468210:intron 45.0%
CAGAGTCCAGATTAGAACAG+TGG - chr3_3:69792298-69792317 None:intergenic 45.0%
CACTGTTCTAATCTGGACTC+TGG + chr3_3:69792296-69792315 Msa0468210:CDS 45.0%
! CAAGTACTGCTCCGAAATGT+CGG + chr3_3:69792929-69792948 Msa0468210:intron 45.0%
! AAGTACTGCTCCGAAATGTC+GGG + chr3_3:69792930-69792949 Msa0468210:intron 45.0%
CATCAAACTGCCCGACATTT+CGG - chr3_3:69792943-69792962 None:intergenic 45.0%
GCTGTAGCACAAAACCAGTT+TGG - chr3_3:69793003-69793022 None:intergenic 45.0%
TGATTGGAAACCACTATGCC+CGG - chr3_3:69793057-69793076 None:intergenic 45.0%
CTGCCTTTCTTGATTGTGTC+TGG + chr3_3:69793244-69793263 Msa0468210:intron 45.0%
CAGTGTGCTGAGTATGTTCA+TGG - chr3_3:69793394-69793413 None:intergenic 45.0%
CATGAACATACTCAGCACAC+TGG + chr3_3:69793392-69793411 Msa0468210:intron 45.0%
ACTCAGCACACTGGAAAAGT+AGG + chr3_3:69793401-69793420 Msa0468210:intron 45.0%
!! AGCGGATTAGTCATGGCTAA+GGG - chr3_3:69793755-69793774 None:intergenic 45.0%
!! TAGCGGATTAGTCATGGCTA+AGG - chr3_3:69793756-69793775 None:intergenic 45.0%
GAAGAGAGGGTGATGCTTAA+GGG - chr3_3:69794097-69794116 None:intergenic 45.0%
AGAAGAGAGGGTGATGCTTA+AGG - chr3_3:69794098-69794117 None:intergenic 45.0%
! AGAGACAAAGCGTTACTCGA+GGG + chr3_3:69794260-69794279 Msa0468210:intron 45.0%
TACTCGAGGGACTAACTTGA+AGG + chr3_3:69794273-69794292 Msa0468210:intron 45.0%
TTTACCAATGAAATGGGGGG+GGG - chr3_3:69794718-69794737 None:intergenic 45.0%
! CATTTTCCCATCAGGTGAAG+AGG - chr3_3:69794788-69794807 None:intergenic 45.0%
!! GGCACCAGAAGCTTTATTTC+AGG - chr3_3:69794962-69794981 None:intergenic 45.0%
AAGCTTCTGGTGCCTTAGTT+AGG + chr3_3:69794968-69794987 Msa0468210:intron 45.0%
AGCTTCTGGTGCCTTAGTTA+GGG + chr3_3:69794969-69794988 Msa0468210:intron 45.0%
!! TTTGGAGTGAGGGTTTTCCT+AGG + chr3_3:69795027-69795046 Msa0468210:intron 45.0%
!! CGCCTGCATAAATGGATTGT+TGG - chr3_3:69795088-69795107 None:intergenic 45.0%
CTTTGTACCGCCTGCATAAA+TGG - chr3_3:69795096-69795115 None:intergenic 45.0%
TTTGTCAGTTGTGGGTTCCT+CGG + chr3_3:69795210-69795229 Msa0468210:intron 45.0%
! GGTTATTTGGGGTGGAAAAC+TGG + chr3_3:69795305-69795324 Msa0468210:intron 45.0%
!! TGGGAGGGGATGTATTTTGA+AGG + chr3_3:69795325-69795344 Msa0468210:intron 45.0%
!! GGGAGGGGATGTATTTTGAA+GGG + chr3_3:69795326-69795345 Msa0468210:intron 45.0%
GTACTCTGTAACTGCAAGGA+TGG + chr3_3:69795593-69795612 Msa0468210:CDS 45.0%
ATTTCTTTGGTCACTGCAGC+TGG + chr3_3:69795737-69795756 Msa0468210:intron 45.0%
AACTGAGCAGAAAGCTGAAG+AGG + chr3_3:69795770-69795789 Msa0468210:CDS 45.0%
!!! TTTTTTTAAAAAAAAAAATG+GGG - chr3_3:69791301-69791320 None:intergenic 5.0%
!!! CTTTTTTTTAAAAAAAAAAA+TGG - chr3_3:69791303-69791322 None:intergenic 5.0%
GGGCGCTAGTGCACAAAAAA+AGG - chr3_3:69788942-69788961 None:intergenic 50.0%
!!! GCGGGTTGATGGTTTTGGTT+TGG - chr3_3:69788963-69788982 None:intergenic 50.0%
! CTGAAGAAGGGGTGATGGTT+GGG - chr3_3:69789054-69789073 None:intergenic 50.0%
GTAAGCTGAAGAAGGGGTGA+TGG - chr3_3:69789059-69789078 None:intergenic 50.0%
AGCGTTTACGACAGAAAGGG+AGG - chr3_3:69789087-69789106 None:intergenic 50.0%
GGCAGCGTTTACGACAGAAA+GGG - chr3_3:69789090-69789109 None:intergenic 50.0%
TGGCAGCGTTTACGACAGAA+AGG - chr3_3:69789091-69789110 None:intergenic 50.0%
!!! CCGCTTCAGACGGTGTTTTT+TGG + chr3_3:69789253-69789272 Msa0468210:five_prime_UTR 50.0%
!!! CAGACGGTGTTTTTTGGAGG+TGG + chr3_3:69789259-69789278 Msa0468210:five_prime_UTR 50.0%
ATACTTGGAGGAACCAGGGA+CGG - chr3_3:69789289-69789308 None:intergenic 50.0%
CAACCATACTTGGAGGAACC+AGG - chr3_3:69789294-69789313 None:intergenic 50.0%
CTGGTTCCTCCAAGTATGGT+TGG + chr3_3:69789292-69789311 Msa0468210:five_prime_UTR 50.0%
ACCGTTCCAACCATACTTGG+AGG - chr3_3:69789301-69789320 None:intergenic 50.0%
TCTGGGAGTTCAAGCGTTTC+AGG + chr3_3:69789447-69789466 Msa0468210:five_prime_UTR 50.0%
GCTTCATTGCCTCATCAGAC+TGG + chr3_3:69789577-69789596 Msa0468210:five_prime_UTR 50.0%
TCAGACTGGTGAAATGTGGG+AGG + chr3_3:69789591-69789610 Msa0468210:five_prime_UTR 50.0%
! ATGAGTTGGCTGTGCCTCAA+TGG - chr3_3:69789632-69789651 None:intergenic 50.0%
GAGTTTAGGCGCGAAATCAC+TGG - chr3_3:69789740-69789759 None:intergenic 50.0%
GAAGGCAATGGAAATTCCCC+TGG - chr3_3:69790042-69790061 None:intergenic 50.0%
!! TCAGCGGATTGTGTCTCAGA+AGG - chr3_3:69790060-69790079 None:intergenic 50.0%
CCTTTCTATGCCTTTGGCCT+CGG + chr3_3:69790198-69790217 Msa0468210:five_prime_UTR 50.0%
!! GAGGTTTTCAAGACCCAGGA+AGG + chr3_3:69790245-69790264 Msa0468210:five_prime_UTR 50.0%
CTGTCCTTGAGAACAGCAAG+AGG + chr3_3:69790372-69790391 Msa0468210:five_prime_UTR 50.0%
!! TCTGGTTCTCTCTCTGGTTG+AGG + chr3_3:69790434-69790453 Msa0468210:five_prime_UTR 50.0%
GTAGCTTCTTGGAGTGCAGA+AGG - chr3_3:69790672-69790691 None:intergenic 50.0%
TGCAGAAAAGGCTGCAAGGT+TGG + chr3_3:69790814-69790833 Msa0468210:intron 50.0%
CCGGTGAGGACTTACAACTT+AGG - chr3_3:69790987-69791006 None:intergenic 50.0%
AGTTCGAATCCCCTTGACGA+CGG + chr3_3:69791222-69791241 Msa0468210:intron 50.0%
! TTGAAAAAGGGTGTGGGGAC+TGG + chr3_3:69791468-69791487 Msa0468210:intron 50.0%
! TGAAAAAGGGTGTGGGGACT+GGG + chr3_3:69791469-69791488 Msa0468210:intron 50.0%
AGTCAGATGAACCCGTAGTG+GGG - chr3_3:69791506-69791525 None:intergenic 50.0%
GAGTCAGATGAACCCGTAGT+GGG - chr3_3:69791507-69791526 None:intergenic 50.0%
!! TCGACCTATTGGTTGGTGAC+TGG + chr3_3:69791525-69791544 Msa0468210:intron 50.0%
!! CGACCTATTGGTTGGTGACT+GGG + chr3_3:69791526-69791545 Msa0468210:intron 50.0%
!! GACCTATTGGTTGGTGACTG+GGG + chr3_3:69791527-69791546 Msa0468210:intron 50.0%
ATCCCCAGTCACCAACCAAT+AGG - chr3_3:69791532-69791551 None:intergenic 50.0%
GGATAGCATTGTCCCCACTA+CGG + chr3_3:69791548-69791567 Msa0468210:intron 50.0%
GATAGCATTGTCCCCACTAC+GGG + chr3_3:69791549-69791568 Msa0468210:intron 50.0%
AGTCAGATGAACCCGTAGTG+GGG - chr3_3:69791506-69791525 None:intergenic 50.0%
GAGTCAGATGAACCCGTAGT+GGG - chr3_3:69791507-69791526 None:intergenic 50.0%
AAGCTCAATCTCTGCTTCCC+TGG - chr3_3:69791857-69791876 None:intergenic 50.0%
! GGACTCTGGAGATAGAGATG+TGG + chr3_3:69792310-69792329 Msa0468210:CDS 50.0%
CGACATTTCGGAGCAGTACT+TGG - chr3_3:69792931-69792950 None:intergenic 50.0%
TTGGAAGCTATGTGGACAGC+CGG + chr3_3:69793035-69793054 Msa0468210:intron 50.0%
!!! AAGCTCGGAGGTGCTTTTGT+AGG - chr3_3:69793281-69793300 None:intergenic 50.0%
TTCTTGTTGGACGTGAAGCC+AGG + chr3_3:69793317-69793336 Msa0468210:intron 50.0%
AAATCCCTCAAGGACTCACC+TGG - chr3_3:69793338-69793357 None:intergenic 50.0%
TGGCTAAGGGTCTGAAGAAG+AGG - chr3_3:69793742-69793761 None:intergenic 50.0%
! GAGAGACAAAGCGTTACTCG+AGG + chr3_3:69794259-69794278 Msa0468210:intron 50.0%
TTACCAATGAAATGGGGGGG+GGG - chr3_3:69794717-69794736 None:intergenic 50.0%
AATGCTTTAGTTGGCGGCAG+TGG + chr3_3:69794804-69794823 Msa0468210:intron 50.0%
ATGAATGCCTGGAACCTCCT+AGG - chr3_3:69795047-69795066 None:intergenic 50.0%
AGTTGTGGGTTCCTCGGAAT+CGG + chr3_3:69795216-69795235 Msa0468210:intron 50.0%
! ATTTGGGGTGGAAAACTGGG+AGG + chr3_3:69795309-69795328 Msa0468210:intron 50.0%
! TTTGGGGTGGAAAACTGGGA+GGG + chr3_3:69795310-69795329 Msa0468210:intron 50.0%
GCAGAAAGCTGAAGAGGATG+AGG + chr3_3:69795776-69795795 Msa0468210:CDS 50.0%
! GCTGAAGAAGGGGTGATGGT+TGG - chr3_3:69789055-69789074 None:intergenic 55.0%
CGATGGGGAAGTCACAGTAG+TGG - chr3_3:69789111-69789130 None:intergenic 55.0%
TGCAAAGACGCCGCTTCAGA+CGG + chr3_3:69789243-69789262 Msa0468210:five_prime_UTR 55.0%
GTCCCTGGTTCCTCCAAGTA+TGG + chr3_3:69789288-69789307 Msa0468210:five_prime_UTR 55.0%
! AAGAGTTGTGGGAGGGCACA+TGG + chr3_3:69789481-69789500 Msa0468210:five_prime_UTR 55.0%
! TTGTGGGAGGGCACATGGTT+TGG + chr3_3:69789486-69789505 Msa0468210:five_prime_UTR 55.0%
! GAGGGCACATGGTTTGGATG+AGG + chr3_3:69789492-69789511 Msa0468210:five_prime_UTR 55.0%
! CCGAGGCCAAAGGCATAGAA+AGG - chr3_3:69790201-69790220 None:intergenic 55.0%
ACTAGTAGAGCCGAGGCCAA+AGG - chr3_3:69790211-69790230 None:intergenic 55.0%
!! CAGCTCTCTGGTTCTCTCTC+TGG + chr3_3:69790428-69790447 Msa0468210:five_prime_UTR 55.0%
! GAAAAAGGGTGTGGGGACTG+GGG + chr3_3:69791470-69791489 Msa0468210:intron 55.0%
!! GGAGAGCATTGTCCCCACTA+CGG + chr3_3:69791491-69791510 Msa0468210:intron 55.0%
!! GAGAGCATTGTCCCCACTAC+GGG + chr3_3:69791492-69791511 Msa0468210:intron 55.0%
CGAGTCAGATGAACCCGTAG+TGG - chr3_3:69791508-69791527 None:intergenic 55.0%
CGAGTCAGATGAACCCGTAG+TGG - chr3_3:69791508-69791527 None:intergenic 55.0%
AAAAGTAGCGAGAGGGAGGG+AGG + chr3_3:69792220-69792239 Msa0468210:intron 55.0%
AAAGTAGCGAGAGGGAGGGA+GGG + chr3_3:69792221-69792240 Msa0468210:intron 55.0%
TGGAAGCTATGTGGACAGCC+GGG + chr3_3:69793036-69793055 Msa0468210:intron 55.0%
TGAAGCCAGGTGAGTCCTTG+AGG + chr3_3:69793330-69793349 Msa0468210:intron 55.0%
GAAGCCAGGTGAGTCCTTGA+GGG + chr3_3:69793331-69793350 Msa0468210:intron 55.0%
TACCAATGAAATGGGGGGGG+GGG - chr3_3:69794716-69794735 None:intergenic 55.0%
! GGAGTGAGGGTTTTCCTAGG+AGG + chr3_3:69795030-69795049 Msa0468210:intron 55.0%
! GGGTTTTCCTAGGAGGTTCC+AGG + chr3_3:69795037-69795056 Msa0468210:intron 55.0%
TTGGGGTGGAAAACTGGGAG+GGG + chr3_3:69795311-69795330 Msa0468210:intron 55.0%
TTCTTTGTGGCACCCTAGCC+TGG - chr3_3:69795866-69795885 None:intergenic 55.0%
GACTTCCCCATCGTCGCTCT+CGG + chr3_3:69789118-69789137 Msa0468210:five_prime_UTR 60.0%
ATGTGGACAGCCGGGCATAG+TGG + chr3_3:69793044-69793063 Msa0468210:intron 60.0%
ACCAATGAAATGGGGGGGGG+GGG - chr3_3:69794715-69794734 None:intergenic 60.0%
GTTGGCGGCAGTGGTGAAAG+CGG + chr3_3:69794813-69794832 Msa0468210:intron 60.0%
TAGCGAGAGGGAGGGAGGGA+GGG + chr3_3:69792225-69792244 Msa0468210:intron 65.0%
CAATGAAATGGGGGGGGGGG+GGG - chr3_3:69794713-69794732 None:intergenic 65.0%
CCAATGAAATGGGGGGGGGG+GGG - chr3_3:69794714-69794733 None:intergenic 65.0%
CGGAGCCGAGAGCGACGATG+GGG - chr3_3:69789126-69789145 None:intergenic 70.0%
GCGGAGCCGAGAGCGACGAT+GGG - chr3_3:69789127-69789146 None:intergenic 70.0%
AGCGGAGCCGAGAGCGACGA+TGG - chr3_3:69789128-69789147 None:intergenic 70.0%
GTAGCGAGAGGGAGGGAGGG+AGG + chr3_3:69792224-69792243 Msa0468210:intron 70.0%
AGCGAGAGGGAGGGAGGGAG+GGG + chr3_3:69792226-69792245 Msa0468210:intron 70.0%
GAGGGAGGGAGGGAGGGGAT+TGG + chr3_3:69792231-69792250 Msa0468210:intron 70.0%
CCCCCCCCCCCCCATTTCAT+TGG + chr3_3:69794711-69794730 Msa0468210:intron 70.0%
TGGAGGTGGGACGCCGTCCC+TGG + chr3_3:69789273-69789292 Msa0468210:five_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 69788916 69796097 69788916 ID=Msa0468210;Name=Msa0468210
chr3_3 mRNA 69788916 69796097 69788916 ID=Msa0468210-mRNA-1;Parent=Msa0468210;Name=Msa0468210-mRNA-1;_AED=0.18;_eAED=0.18;_QI=1553|0.42|0.5|0.75|0.71|0.75|8|257|125
chr3_3 exon 69788916 69789701 69788916 ID=Msa0468210-mRNA-1:exon:16664;Parent=Msa0468210-mRNA-1
chr3_3 exon 69790032 69790803 69790032 ID=Msa0468210-mRNA-1:exon:16665;Parent=Msa0468210-mRNA-1
chr3_3 exon 69791453 69791458 69791453 ID=Msa0468210-mRNA-1:exon:16666;Parent=Msa0468210-mRNA-1
chr3_3 exon 69792079 69792187 69792079 ID=Msa0468210-mRNA-1:exon:16667;Parent=Msa0468210-mRNA-1
chr3_3 exon 69792281 69792355 69792281 ID=Msa0468210-mRNA-1:exon:16668;Parent=Msa0468210-mRNA-1
chr3_3 exon 69792825 69792866 69792825 ID=Msa0468210-mRNA-1:exon:16669;Parent=Msa0468210-mRNA-1
chr3_3 exon 69795593 69795648 69795593 ID=Msa0468210-mRNA-1:exon:16670;Parent=Msa0468210-mRNA-1
chr3_3 exon 69795756 69796097 69795756 ID=Msa0468210-mRNA-1:exon:16671;Parent=Msa0468210-mRNA-1
chr3_3 five_prime_UTR 69788916 69789701 69788916 ID=Msa0468210-mRNA-1:five_prime_utr;Parent=Msa0468210-mRNA-1
chr3_3 five_prime_UTR 69790032 69790798 69790032 ID=Msa0468210-mRNA-1:five_prime_utr;Parent=Msa0468210-mRNA-1
chr3_3 CDS 69790799 69790803 69790799 ID=Msa0468210-mRNA-1:cds;Parent=Msa0468210-mRNA-1
chr3_3 CDS 69791453 69791458 69791453 ID=Msa0468210-mRNA-1:cds;Parent=Msa0468210-mRNA-1
chr3_3 CDS 69792079 69792187 69792079 ID=Msa0468210-mRNA-1:cds;Parent=Msa0468210-mRNA-1
chr3_3 CDS 69792281 69792355 69792281 ID=Msa0468210-mRNA-1:cds;Parent=Msa0468210-mRNA-1
chr3_3 CDS 69792825 69792866 69792825 ID=Msa0468210-mRNA-1:cds;Parent=Msa0468210-mRNA-1
chr3_3 CDS 69795593 69795648 69795593 ID=Msa0468210-mRNA-1:cds;Parent=Msa0468210-mRNA-1
chr3_3 CDS 69795756 69795840 69795756 ID=Msa0468210-mRNA-1:cds;Parent=Msa0468210-mRNA-1
chr3_3 three_prime_UTR 69795841 69796097 69795841 ID=Msa0468210-mRNA-1:three_prime_utr;Parent=Msa0468210-mRNA-1
Gene Sequence

>Msa0468210

ATGTTGAACATTTGTATTTGGAATGGGTGTGTTGGCCTAAAGAAATTAAAGTTATTTAGTAGCAAGCATGATGTGAATACGGGACAATGTGGGATTTTAAGTTGCAGCAAGTGGAATAAGAAATTCCATGATCACCACTGTTCTAATCTGGACTCTGGAGATAGAGATGTGGAATCTGCACGACAATATTCTCAGGTACTACGACGCTCTATTGTATTTGAACTTGATCAATTTAAGGTACTCTGTAACTGCAAGGATGGTTTTGATTTTGCGGAAGTTCTATTCTTGAAGAGCTGGCTTTATTATAAACTGAGCAGAAAGCTGAAGAGGATGAGGAGCCTGAAACTAGTGCCAATAAAAGAGGCAGAAGAAAACTAG
Protein sequence

>Msa0468210

MLNICIWNGCVGLKKLKLFSSKHDVNTGQCGILSCSKWNKKFHDHHCSNLDSGDRDVESARQYSQVLRRSIVFELDQFKVLCNCKDGFDFAEVLFLKSWLYYKLSRKLKRMRSLKLVPIKEAEEN*