AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0574310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0574310 MtrunA17_Chr8g0390701 97.384 688 18 0 1 688 1 688 0.0 1370
Msa0574310 MtrunA17_Chr6g0485101 56.873 742 222 19 1 688 1 698 0.0 757
Msa0574310 MtrunA17_Chr6g0460621 50.233 215 96 5 16 222 15 226 1.17e-62 221
Msa0574310 MtrunA17_Chr1g0148531 26.879 346 155 9 66 350 1 309 6.92e-24 105
Msa0574310 MtrunA17_Chr8g0360731 31.579 152 80 7 10 146 14 156 2.79e-17 85.1
Msa0574310 MtrunA17_Chr2g0318391 29.193 161 102 5 10 166 14 166 4.23e-17 84.7
Msa0574310 MtrunA17_Chr6g0481511 33.333 120 64 5 10 122 31 141 2.17e-13 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0574310 AT4G13350.1 44.857 700 276 22 1 688 1 602 6.34e-160 474
Msa0574310 AT4G13350.2 44.857 700 276 22 1 688 1 602 6.34e-160 474
Msa0574310 AT4G32630.2 33.889 720 346 26 5 687 1 627 1.72e-84 279
Msa0574310 AT4G32630.6 33.797 719 347 26 5 687 1 626 4.16e-84 278
Msa0574310 AT4G32630.4 33.797 719 347 26 5 687 1 626 4.16e-84 278
Msa0574310 AT4G32630.5 33.797 719 347 26 5 687 1 626 4.16e-84 278
Msa0574310 AT4G32630.3 33.797 719 347 26 5 687 1 626 4.16e-84 278
Msa0574310 AT4G32630.1 33.797 719 347 26 5 687 1 626 4.16e-84 278
Msa0574310 AT1G08680.3 57.485 167 70 1 1 166 1 167 4.26e-63 221
Msa0574310 AT1G08680.5 57.485 167 70 1 1 166 1 167 4.83e-63 220
Msa0574310 AT1G08680.4 57.485 167 70 1 1 166 1 167 7.62e-63 221
Msa0574310 AT1G08680.2 57.485 167 70 1 1 166 1 167 8.40e-63 221
Msa0574310 AT1G08680.1 57.485 167 70 1 1 166 1 167 9.46e-63 221
Msa0574310 AT5G54310.1 31.098 164 94 9 10 166 14 165 5.48e-16 81.6
Msa0574310 AT3G17660.1 27.966 118 75 3 10 124 14 124 6.69e-11 63.5
Msa0574310 AT3G17660.4 28.205 117 74 3 10 123 14 123 8.30e-11 62.0

Find 254 sgRNAs with CRISPR-Local

Find 569 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTTACCTGATCAAGTTTC+TGG 0.127332 4_1:-77763974 Msa0574310:CDS
CCGGCCTGTTAGAGAAATTT+TGG 0.130425 4_1:-77764642 Msa0574310:CDS
TTCCTGTAATCTTATTATTT+TGG 0.158193 4_1:-77761218 Msa0574310:three_prime_UTR
GCCTGTCCACTGTTTGCTTT+GGG 0.218101 4_1:+77764584 None:intergenic
TGTAAATTATTTGTTGTTAT+AGG 0.219132 4_1:-77761467 Msa0574310:three_prime_UTR
GTTGCTTCATTAGCATCTTC+TGG 0.220268 4_1:-77763778 Msa0574310:CDS
TTCTGATGAGGTTCCATTAC+TGG 0.230296 4_1:+77764231 None:intergenic
CCCATTGACAGGCAGATATT+TGG 0.240230 4_1:+77761433 None:intergenic
CAAAGAAAGAGTGAAGAAAA+AGG 0.264539 4_1:+77769357 None:intergenic
AATATGTATGCACAAATTTC+TGG 0.268484 4_1:-77766826 Msa0574310:CDS
TGATTTATTTGAATAGTAAA+AGG 0.271199 4_1:+77769402 None:intergenic
GGTAATGAGGGAGCTGCTTT+TGG 0.276609 4_1:-77761738 Msa0574310:CDS
CGGCGCCAGTCATTGATTAT+TGG 0.285411 4_1:+77764791 None:intergenic
CATCAAGGAATTGGGACTTT+TGG 0.288342 4_1:-77761759 Msa0574310:CDS
CAGGAAGACGGAGTCGTATC+AGG 0.291055 4_1:-77764948 Msa0574310:CDS
TACCAAAATAATAAGATTAC+AGG 0.295172 4_1:+77761216 None:intergenic
TCTCCCAAAATTTCTCTAAC+AGG 0.296870 4_1:+77764638 None:intergenic
AGCCTGTCCACTGTTTGCTT+TGG 0.303716 4_1:+77764583 None:intergenic
CTGATACGACTCCGTCTTCC+TGG 0.305228 4_1:+77764949 None:intergenic
CCAGTAATGTTGACAGGATT+CGG 0.306800 4_1:-77766081 Msa0574310:intron
ATTGTGAACCCAACAAATTC+TGG 0.312108 4_1:-77764106 Msa0574310:CDS
TGCTGCTGATACTGCAAATT+AGG 0.317561 4_1:+77763715 None:intergenic
CCCATTTGCCAGCCTGGGAC+TGG 0.318787 4_1:+77763233 None:intergenic
TCCAGTCCCAGGCTGGCAAA+TGG 0.328210 4_1:-77763234 Msa0574310:CDS
GTTGCACCCCTGTACAAATA+TGG 0.333664 4_1:-77761576 Msa0574310:three_prime_UTR
GTTGTGCTGTGCTGTGCTGC+TGG 0.333699 4_1:-77769262 Msa0574310:five_prime_UTR
CTTTGGCTCGTTCAAGAGAT+TGG 0.346177 4_1:+77764696 None:intergenic
AAGTTAAGCTTGAGACTATC+AGG 0.347652 4_1:-77764210 Msa0574310:CDS
CAAATTCTGGTGATAACAAT+TGG 0.350343 4_1:-77764093 Msa0574310:CDS
TGGGTAATCAATCTCTTTCC+TGG 0.352906 4_1:-77762343 Msa0574310:CDS
TGTGTGGCTTGAGGAATTAC+TGG 0.356143 4_1:+77764145 None:intergenic
ATTGAGTTCTATACCACTAT+AGG 0.360525 4_1:-77761142 Msa0574310:three_prime_UTR
GGTGCACCCATTTGCCAGCC+TGG 0.366079 4_1:+77763227 None:intergenic
TGTTTCACCTGCAGGGCCTT+TGG 0.366625 4_1:-77763869 Msa0574310:intron
TCTTCTTCTTCTTAGTTCTC+AGG 0.371790 4_1:-77769067 Msa0574310:intron
ATGTGTAGGCATCAAGGAAT+TGG 0.372319 4_1:-77761768 Msa0574310:intron
TTTCTGAGTTGGTGAAATTA+CGG 0.374040 4_1:+77769305 None:intergenic
CACTTTACAACCTTTACTCT+TGG 0.382920 4_1:+77765995 None:intergenic
ACAAATACTTACCCGCTATC+AGG 0.383672 4_1:+77766164 None:intergenic
GCTCAAAGAACCCAGGTCTT+TGG 0.385160 4_1:+77764679 None:intergenic
CCAGTCCCAGGCTGGCAAAT+GGG 0.389187 4_1:-77763233 Msa0574310:CDS
TGGCAAATGGGTGCACCGCC+TGG 0.389286 4_1:-77763221 Msa0574310:CDS
CAGTAATGTTGACAGGATTC+GGG 0.390264 4_1:-77766080 Msa0574310:CDS
GAACATCATCAAAATCAATA+AGG 0.390657 4_1:+77764185 None:intergenic
CTTACGGTTGGGGCTTGAAC+TGG 0.391763 4_1:+77762988 None:intergenic
TACTCTTGGAGGTTTGTCAT+AGG 0.392405 4_1:+77766009 None:intergenic
TCCTTCCCTGCTCCAGTCCC+AGG 0.393386 4_1:-77763245 Msa0574310:CDS
TGCCAGCCTGGGACTGGAGC+AGG 0.395880 4_1:+77763239 None:intergenic
TTGATTATTGGAGGGCGGCC+AGG 0.396311 4_1:+77764803 None:intergenic
TTCACCTGCAGGGCCTTTGG+CGG 0.396650 4_1:-77763866 Msa0574310:intron
CTCCGTCTTCCTGGTGTCAT+AGG 0.401441 4_1:+77764958 None:intergenic
CACAGCACAGCACAACAACC+AGG 0.401521 4_1:+77769269 None:intergenic
TAACGAGGAGGGTGGATTCC+AGG 0.405464 4_1:+77762325 None:intergenic
TTACTCGATGAGTAAATTCC+CGG 0.408102 4_1:+77766405 None:intergenic
TTCAGTGATAGGTCTAGTTC+AGG 0.410605 4_1:-77764881 Msa0574310:CDS
AAGATGATGGAACTGACAAC+TGG 0.411564 4_1:+77763993 None:intergenic
TCACCTGCAGGGCCTTTGGC+GGG 0.416171 4_1:-77763865 Msa0574310:intron
ACCTGAGGTAAAAGTATCTC+AGG 0.416540 4_1:-77764053 Msa0574310:CDS
AATGGGTGCACCGCCTGGCA+TGG 0.419401 4_1:-77763216 Msa0574310:CDS
ACTGGAGCAATAGGTGGTTC+AGG 0.420178 4_1:+77764163 None:intergenic
GCCAAATATCTGCCTGTCAA+TGG 0.421035 4_1:-77761434 Msa0574310:three_prime_UTR
CAGTTAATGCATCTTCGATT+CGG 0.423935 4_1:+77768346 None:intergenic
TGGCGCCGTGAAGATAGATT+TGG 0.426435 4_1:-77764776 Msa0574310:CDS
GTGTCTACAGTAGAAGTTTG+TGG 0.426996 4_1:+77763423 None:intergenic
TGAGGAATTACTGGAGCAAT+AGG 0.431257 4_1:+77764154 None:intergenic
TGTTATCACCAGAATTTGTT+GGG 0.433128 4_1:+77764098 None:intergenic
CATTTCTCAAAGGTTGTCAA+TGG 0.435836 4_1:-77763465 Msa0574310:CDS
TTGTTATCACCAGAATTTGT+TGG 0.440130 4_1:+77764097 None:intergenic
GGTTCGTTGATCACATCAAA+TGG 0.440527 4_1:+77763015 None:intergenic
TCTCTAACAGGCCGGACAAC+AGG 0.442542 4_1:+77764650 None:intergenic
ATGAACACCGTTTCAGTGAT+AGG 0.444146 4_1:-77764892 Msa0574310:CDS
CAATTACTCGTCTAGGAGAA+AGG 0.446137 4_1:+77761355 None:intergenic
GGTGTAGATTGTTGAATAGT+AGG 0.446180 4_1:+77763661 None:intergenic
TGATTATTGGAGGGCGGCCA+GGG 0.446287 4_1:+77764804 None:intergenic
TCCCTGCTCCAGTCCCAGGC+TGG 0.447450 4_1:-77763241 Msa0574310:CDS
GGAAGTTCATTTCTTCCACT+TGG 0.447805 4_1:+77763396 None:intergenic
AGCATGTTAAATTAACTGTT+TGG 0.451221 4_1:-77761172 Msa0574310:three_prime_UTR
AACAGTGGACAGGCTGCTAA+TGG 0.451438 4_1:-77764575 Msa0574310:CDS
ATAGTGGTATAGAACTCAAT+CGG 0.458952 4_1:+77761145 None:intergenic
GATTGATTACCCATGTTTGA+AGG 0.460288 4_1:+77762353 None:intergenic
ATTTCTCAAAGGTTGTCAAT+GGG 0.460296 4_1:-77763464 Msa0574310:CDS
CTCCTTTGATGTTGCACCTG+AGG 0.462386 4_1:-77764068 Msa0574310:CDS
TGAGCCCACCACCTGTTGTC+CGG 0.463311 4_1:-77764661 Msa0574310:CDS
TTTACAACCTTTACTCTTGG+AGG 0.463494 4_1:+77765998 None:intergenic
CCAAATATCTGCCTGTCAAT+GGG 0.464451 4_1:-77761433 Msa0574310:three_prime_UTR
AACTTCAACCATATTTGTAC+AGG 0.469628 4_1:+77761568 None:intergenic
ACTTTAAACCCCTTCCCTGC+AGG 0.470044 4_1:-77761666 Msa0574310:CDS
CCTTGCAAAGATGACATAGA+AGG 0.470966 4_1:+77762413 None:intergenic
ATTACTGGATGCCAAGCTAC+TGG 0.471659 4_1:+77764246 None:intergenic
ACAGGCCGGACAACAGGTGG+TGG 0.473980 4_1:+77764656 None:intergenic
GATGTTCACAGTTGGAGCTC+CGG 0.474090 4_1:+77763822 None:intergenic
ATTGAAATTACTTACGGTTG+GGG 0.477287 4_1:+77762978 None:intergenic
TGTTCATATGTATCCTCATA+AGG 0.477373 4_1:+77764908 None:intergenic
CATATTCATGCCTCAGCAAT+GGG 0.480130 4_1:-77762272 Msa0574310:CDS
CCTTCTATGTCATCTTTGCA+AGG 0.482591 4_1:-77762413 Msa0574310:CDS
TGTGTAGGCATCAAGGAATT+GGG 0.485262 4_1:-77761767 Msa0574310:intron
TAAAATCTCAGGGGCGTACA+TGG 0.485361 4_1:-77762167 Msa0574310:intron
GCCTGGGACTGGAGCAGGGA+AGG 0.486363 4_1:+77763244 None:intergenic
CGCCAGTCATTGATTATTGG+AGG 0.486736 4_1:+77764794 None:intergenic
AGTTCAGGTGGAAGAAGTCC+TGG 0.490126 4_1:-77764866 Msa0574310:CDS
ACTTCAAGAAGGAGGAAATC+AGG 0.490868 4_1:-77766339 Msa0574310:intron
AATTACTCGTCTAGGAGAAA+GGG 0.493942 4_1:+77761356 None:intergenic
AGAGAGAGATCTTTCTGAGT+TGG 0.494496 4_1:+77769294 None:intergenic
CCGAATGGATTACCTCCTGC+AGG 0.494585 4_1:+77761651 None:intergenic
TGCAGTAAACCCTTCAAACA+TGG 0.495545 4_1:-77762363 Msa0574310:CDS
CTCATTCTTTACCTGATAGC+GGG 0.496064 4_1:-77766175 Msa0574310:intron
TGTCTTTCTTGATCATATCC+AGG 0.498660 4_1:+77764848 None:intergenic
GTTGGGGCTTGAACTGGTGT+TGG 0.503130 4_1:+77762994 None:intergenic
GTGCACCCATTTGCCAGCCT+GGG 0.503540 4_1:+77763228 None:intergenic
AAATGTGGCACTAGCGTGCT+TGG 0.504258 4_1:+77763483 None:intergenic
CGAGTGGATTTACATTTGAA+AGG 0.505809 4_1:+77764029 None:intergenic
CATCTCCAAATCTATCTTCA+CGG 0.506927 4_1:+77764771 None:intergenic
AAATTCTGGTGATAACAATT+GGG 0.507260 4_1:-77764092 Msa0574310:CDS
AACGGCATCTTCCAGTAGCT+TGG 0.507476 4_1:-77764257 Msa0574310:CDS
TGTTGTTATAGGAAAGATGA+AGG 0.509927 4_1:-77761456 Msa0574310:three_prime_UTR
AAATTTGTGCATACATATTG+TGG 0.510892 4_1:+77766830 None:intergenic
TTATTCAAAGCTCCACCTAC+TGG 0.512473 4_1:+77763637 None:intergenic
GATGACCGATCTCTCTATGC+TGG 0.514247 4_1:+77761512 None:intergenic
GCCGATCATAAGAGAAGCCC+TGG 0.515583 4_1:-77764821 Msa0574310:CDS
GAAGATAATCGTATAACTGA+TGG 0.516298 4_1:-77764737 Msa0574310:CDS
ATGGGTGCACCGCCTGGCAT+GGG 0.517111 4_1:-77763215 Msa0574310:CDS
TGTCCACTGTTTGCTTTGGG+AGG 0.517269 4_1:+77764587 None:intergenic
AATATAGATCAGCAACTGAA+TGG 0.517650 4_1:-77761708 Msa0574310:CDS
ACTTGATCAGGTAAAGATGA+TGG 0.520316 4_1:+77763980 None:intergenic
GCTAATGAAGCAACACTGGA+TGG 0.520961 4_1:+77763787 None:intergenic
AGAAAGATCTCTCTCTTCCC+TGG 0.521754 4_1:-77769287 Msa0574310:five_prime_UTR
CCTAAAACAATTACTCGTCT+AGG 0.522885 4_1:+77761348 None:intergenic
AACTAGACCTATCACTGAAA+CGG 0.523791 4_1:+77764885 None:intergenic
AACTGATGGAGGTATTAAGA+TGG 0.524130 4_1:-77764723 Msa0574310:CDS
TATGTGGATAGGAGATTCAC+TGG 0.527674 4_1:-77766040 Msa0574310:CDS
ATTAAGCATCTGACGCTACA+AGG 0.528892 4_1:+77761320 None:intergenic
TGGATTACCTCCTGCAGGGA+AGG 0.529326 4_1:+77761656 None:intergenic
CCTGCAGGAGGTAATCCATT+CGG 0.529389 4_1:-77761651 Msa0574310:CDS
ACATTGCAGTAATCCTATAG+TGG 0.534607 4_1:+77761129 None:intergenic
GATTACCTCCTGCAGGGAAG+GGG 0.535685 4_1:+77761658 None:intergenic
GGAGATGACAAGTAGACTAA+AGG 0.536480 4_1:-77768416 Msa0574310:exon
GTTTAAGCTGCTGACGGTGA+TGG 0.537416 4_1:+77769225 None:intergenic
TGATACTGCAAATTAGGCCA+TGG 0.537541 4_1:+77763721 None:intergenic
ACATATTCATGCCTCAGCAA+TGG 0.538067 4_1:-77762273 Msa0574310:CDS
ATAGTGTGTTATGGTGATCA+TGG 0.538561 4_1:-77761299 Msa0574310:three_prime_UTR
TGAAATAGTTACCTTGGCAT+TGG 0.541368 4_1:+77762121 None:intergenic
GCCCTCCAATAATCAATGAC+TGG 0.541872 4_1:-77764796 Msa0574310:CDS
TGACAAACCTCCAAGAGTAA+AGG 0.542212 4_1:-77766005 Msa0574310:intron
TACCTCAGGTGCAACATCAA+AGG 0.543204 4_1:+77764066 None:intergenic
AACTGAATGTGTAGGCATCA+AGG 0.543374 4_1:-77761774 Msa0574310:intron
ACTGTACGACTCCCATTGAC+AGG 0.549231 4_1:+77761422 None:intergenic
TTTGTAGATTGTGATGGTTG+TGG 0.549399 4_1:+77763039 None:intergenic
GGATTACCTCCTGCAGGGAA+GGG 0.552909 4_1:+77761657 None:intergenic
ACAGCACAGCACAACAACCA+GGG 0.552964 4_1:+77769270 None:intergenic
CATGGGAGTGCATTATTGAA+AGG 0.553116 4_1:+77763739 None:intergenic
GAAGGGTTTACTGCAGCTGA+AGG 0.554095 4_1:+77762371 None:intergenic
TTGTGCAGTAAATTTAGCCA+TGG 0.554246 4_1:+77766373 None:intergenic
GTTTCCTCTCGACTAAAGAA+TGG 0.554597 4_1:+77761538 None:intergenic
ATTGATTACCCATGTTTGAA+GGG 0.554638 4_1:+77762354 None:intergenic
CCAAAATTTCTCTAACAGGC+CGG 0.556026 4_1:+77764642 None:intergenic
TAGTGGTATAGAACTCAATC+GGG 0.556059 4_1:+77761146 None:intergenic
TGGACTCCAGAAACTTGATC+AGG 0.560113 4_1:+77763968 None:intergenic
TCTTGAACGAGCCAAAGACC+TGG 0.560518 4_1:-77764690 Msa0574310:CDS
GCCAGGGCTTCTCTTATGAT+CGG 0.560564 4_1:+77764820 None:intergenic
AGATGCTAATGAAGCAACAC+TGG 0.561491 4_1:+77763783 None:intergenic
TCCCAAAGCAAACAGTGGAC+AGG 0.562444 4_1:-77764585 Msa0574310:CDS
AGTAGCTTGGCATCCAGTAA+TGG 0.562519 4_1:-77764244 Msa0574310:CDS
GGGTGCAACAAATTGATGCT+TGG 0.562779 4_1:+77761590 None:intergenic
ATAGGAGATTCACTGGCGAC+AGG 0.563351 4_1:-77766033 Msa0574310:CDS
AGGTGGAGCTTTGAATAACC+AGG 0.563485 4_1:-77763632 Msa0574310:intron
GTTGCGAAGATGTTCACAGT+TGG 0.565416 4_1:+77763814 None:intergenic
TGTACCATTCTTTAGTCGAG+AGG 0.569260 4_1:-77761542 Msa0574310:three_prime_UTR
TGAGCTGATGAATTCGAGAA+AGG 0.569428 4_1:-77761389 Msa0574310:three_prime_UTR
CTCAAGCTTAACTTCTGATG+AGG 0.569730 4_1:+77764219 None:intergenic
AGATGCTTAATAGTGTGTTA+TGG 0.570213 4_1:-77761308 Msa0574310:three_prime_UTR
TAGATCAGCAACTGAATGGT+AGG 0.571969 4_1:-77761704 Msa0574310:CDS
TTGGTGCCAGTAATGTTGAC+AGG 0.571972 4_1:-77766087 Msa0574310:intron
TCAAGCGTGTTTATGTGGAT+AGG 0.573093 4_1:-77766051 Msa0574310:CDS
GCTTTGTACAGCTCAGAATG+AGG 0.575343 4_1:+77769327 None:intergenic
AATGGATTTGTAGATTGTGA+TGG 0.576263 4_1:+77763033 None:intergenic
GAAGTTAGTGCACTTCAAGA+AGG 0.576846 4_1:-77766350 Msa0574310:CDS
GCCAGTCATTGATTATTGGA+GGG 0.578746 4_1:+77764795 None:intergenic
TGAACTGAGACACCCATGCC+AGG 0.578979 4_1:+77763203 None:intergenic
GCAGCTGAAGGCGCTACACT+AGG 0.581634 4_1:+77762383 None:intergenic
GATCAAGTTTCTGGAGTCCA+AGG 0.581773 4_1:-77763965 Msa0574310:intron
ACACTCCAGCATAGAGAGAT+CGG 0.582746 4_1:-77761517 Msa0574310:three_prime_UTR
AGCATCTTCTGGATTGACAA+TGG 0.582951 4_1:-77763767 Msa0574310:CDS
CTAATGAAGCAACACTGGAT+GGG 0.584550 4_1:+77763788 None:intergenic
AGTGATAGGTCTAGTTCAGG+TGG 0.585327 4_1:-77764878 Msa0574310:CDS
TTGAGCCACAGTAGTTTGTG+TGG 0.586273 4_1:+77764129 None:intergenic
TTTGTTTGCACAAACTGCAG+TGG 0.586368 4_1:-77766800 Msa0574310:CDS
TTGACAACCTTTGAGAAATG+TGG 0.587864 4_1:+77763468 None:intergenic
TCAGCTCTTACTGCTACTGC+CGG 0.589167 4_1:-77763841 Msa0574310:CDS
CATATGTATCCTCATAAGGA+AGG 0.589268 4_1:+77764912 None:intergenic
GCCAGCCTGGGACTGGAGCA+GGG 0.589815 4_1:+77763240 None:intergenic
GAAGGGGTTTAAAGTAGCAG+AGG 0.592775 4_1:+77761674 None:intergenic
GATACTGCAAATTAGGCCAT+GGG 0.593319 4_1:+77763722 None:intergenic
GTTAGTGCACTTCAAGAAGG+AGG 0.597643 4_1:-77766347 Msa0574310:CDS
AGGAAGACGGAGTCGTATCA+GGG 0.597957 4_1:-77764947 Msa0574310:CDS
TTTCTCAAAGGTTGTCAATG+GGG 0.599288 4_1:-77763463 Msa0574310:CDS
AAATCTTAAGATCATCCGAA+TGG 0.599296 4_1:+77761636 None:intergenic
AAGATAGATTTGGAGATGGA+CGG 0.599785 4_1:-77764766 Msa0574310:CDS
CAACAAATAATTTACAAGCA+AGG 0.601128 4_1:+77761474 None:intergenic
TCGAGTAAAATCAATCTCCA+TGG 0.602286 4_1:-77766390 Msa0574310:CDS
ACTTCAACCATATTTGTACA+GGG 0.603830 4_1:+77761569 None:intergenic
TCACTAATGTGCCAATGCCA+AGG 0.604843 4_1:-77762132 Msa0574310:intron
CTTGAACGAGCCAAAGACCT+GGG 0.608680 4_1:-77764689 Msa0574310:CDS
CCGTTGTTCACATCTGCTGT+TGG 0.610741 4_1:-77763688 Msa0574310:CDS
TGTGCTTGTGGAGGGAGCGT+TGG 0.610899 4_1:+77762293 None:intergenic
TTAAACCCCTTCCCTGCAGG+AGG 0.611118 4_1:-77761663 Msa0574310:CDS
ACTCATTCTTTACCTGATAG+CGG 0.615061 4_1:-77766176 Msa0574310:CDS
GATAATCGTATAACTGATGG+AGG 0.619976 4_1:-77764734 Msa0574310:CDS
GGAATTACTGGAGCAATAGG+TGG 0.620928 4_1:+77764157 None:intergenic
CAATCTACACCACCAGTAGG+TGG 0.623047 4_1:-77763649 Msa0574310:CDS
GCATCTCATACAGGGCGACA+AGG 0.624797 4_1:-77764987 Msa0574310:intron
AGTTCAATATAATAATGTGA+TGG 0.625728 4_1:-77763186 Msa0574310:intron
ACAGTAGTTTGTGTGGCTTG+AGG 0.625751 4_1:+77764136 None:intergenic
GAGGCATGAATATGTGCTTG+TGG 0.625753 4_1:+77762281 None:intergenic
CGTGAAGATAGATTTGGAGA+TGG 0.626673 4_1:-77764770 Msa0574310:CDS
CTTTCAATAATGCACTCCCA+TGG 0.627451 4_1:-77763738 Msa0574310:CDS
GCTAGTGCCACATTTCTCAA+AGG 0.627904 4_1:-77763475 Msa0574310:CDS
TTCCTATGACACCAGGAAGA+CGG 0.630287 4_1:-77764960 Msa0574310:CDS
TTCAAAGCTCCACCTACTGG+TGG 0.631043 4_1:+77763640 None:intergenic
GCAGTAAACCCTTCAAACAT+GGG 0.631363 4_1:-77762362 Msa0574310:CDS
GCAACTGAATGGTAGGTCGT+CGG 0.633722 4_1:-77761697 Msa0574310:CDS
CAGGCCGGACAACAGGTGGT+GGG 0.637390 4_1:+77764657 None:intergenic
ACTGTAGACACAAAACCAAG+TGG 0.639870 4_1:-77763411 Msa0574310:CDS
TGTGATGGTTGTGGAAAACT+CGG 0.641253 4_1:+77763048 None:intergenic
GCATATGATAACGAGGAGGG+TGG 0.642199 4_1:+77762317 None:intergenic
CAAAGAATAATAATACAACC+AGG 0.642380 4_1:+77761258 None:intergenic
CATGAATATGTGCTTGTGGA+GGG 0.642440 4_1:+77762285 None:intergenic
CGAATGGATTACCTCCTGCA+GGG 0.644063 4_1:+77761652 None:intergenic
ATGCATTAACTGCAACAGCA+TGG 0.645179 4_1:-77768335 Msa0574310:intron
CTAACAGGCCGGACAACAGG+TGG 0.645439 4_1:+77764653 None:intergenic
TGGAAGAAATGAACTTCCTG+AGG 0.645779 4_1:-77763391 Msa0574310:intron
AGTCATTGATTATTGGAGGG+CGG 0.647052 4_1:+77764798 None:intergenic
CTCAGGTGCAACATCAAAGG+AGG 0.648644 4_1:+77764069 None:intergenic
TAATGGCTCAACACTCACAC+AGG 0.649534 4_1:-77764558 Msa0574310:intron
CGTTGGTGCATATGATAACG+AGG 0.649957 4_1:+77762310 None:intergenic
TGGTTGTGGAAAACTCGGCA+TGG 0.650360 4_1:+77763053 None:intergenic
TGGGACAGCATCGATTCGAG+TGG 0.652918 4_1:+77764013 None:intergenic
AGGATGATTCCTATGACACC+AGG 0.654640 4_1:-77764967 Msa0574310:CDS
AGATGATGGAACTGACAACT+GGG 0.654939 4_1:+77763994 None:intergenic
GTAAGAGCTGATCCCGCCAA+AGG 0.656856 4_1:+77763853 None:intergenic
CCTGAGGTAAAAGTATCTCA+GGG 0.657396 4_1:-77764052 Msa0574310:CDS
GGTGCATATGATAACGAGGA+GGG 0.662239 4_1:+77762314 None:intergenic
CAACAATCTACACCACCAGT+AGG 0.664477 4_1:-77763652 Msa0574310:CDS
GCATGAATATGTGCTTGTGG+AGG 0.669871 4_1:+77762284 None:intergenic
GGAGGTTCACTAATTCGCAG+AGG 0.674693 4_1:+77764605 None:intergenic
TATACTTGGTCCCATTGCTG+AGG 0.675665 4_1:+77762262 None:intergenic
GTGGTGGGCTCAAAGAACCC+AGG 0.678153 4_1:+77764672 None:intergenic
GAACCTCCCAAAGCAAACAG+TGG 0.681218 4_1:-77764590 Msa0574310:CDS
CTTCAACCATATTTGTACAG+GGG 0.697018 4_1:+77761570 None:intergenic
TCAAGCCACACAAACTACTG+TGG 0.702802 4_1:-77764134 Msa0574310:CDS
TGGTGCATATGATAACGAGG+AGG 0.724647 4_1:+77762313 None:intergenic
ACTGAGACACCCATGCCAGG+CGG 0.743510 4_1:+77763206 None:intergenic
CCAACAGCAGATGTGAACAA+CGG 0.748816 4_1:+77763688 None:intergenic
AAGACGGAGTCGTATCAGGG+AGG 0.754193 4_1:-77764944 Msa0574310:CDS
AAATTGGTATAAAAGAGACG+TGG 0.757744 4_1:+77769153 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATTAATTTAAAAAGGT+TGG + chr4_1:77762516-77762535 None:intergenic 10.0%
!! CTTGAATAATTAATTTAAAA+AGG + chr4_1:77762520-77762539 None:intergenic 10.0%
!!! AAGGCTTTTTTTTTTTTTTT+TGG + chr4_1:77761186-77761205 None:intergenic 15.0%
!! TGATTTATTTGAATAGTAAA+AGG + chr4_1:77761205-77761224 None:intergenic 15.0%
!! AAACATGAAATAAACAAAAA+TGG + chr4_1:77761662-77761681 None:intergenic 15.0%
!!! TTTTTGTTTATTTCATGTTT+TGG - chr4_1:77761662-77761681 Msa0574310:CDS 15.0%
!! AAATTAATTATTCAAGATGA+AGG - chr4_1:77762524-77762543 Msa0574310:intron 15.0%
!! AATTAATTATTCAAGATGAA+GGG - chr4_1:77762525-77762544 Msa0574310:intron 15.0%
!! GAAAAATACAATTAATATAC+AGG + chr4_1:77764021-77764040 None:intergenic 15.0%
!! TAAAAAATCAGTTTAGAAAT+GGG + chr4_1:77764166-77764185 None:intergenic 15.0%
!! ATAAAAAATCAGTTTAGAAA+TGG + chr4_1:77764167-77764186 None:intergenic 15.0%
!!! AATAAATCTATCATAAGTTT+TGG + chr4_1:77764309-77764328 None:intergenic 15.0%
!! AAAATAATATGTAACATCAA+TGG + chr4_1:77764337-77764356 None:intergenic 15.0%
!!! AAGAAATATTTTTCAAAGAA+TGG - chr4_1:77764396-77764415 Msa0574310:intron 15.0%
!!! AGAAATATTTTTCAAAGAAT+GGG - chr4_1:77764397-77764416 Msa0574310:intron 15.0%
!!! TTCTTTTTCTTTTTAATTCT+AGG - chr4_1:77764471-77764490 Msa0574310:intron 15.0%
!!! TCTTTTTCTTTTTAATTCTA+GGG - chr4_1:77764472-77764491 Msa0574310:intron 15.0%
!! TATATAGAATATGCTTAAAA+TGG + chr4_1:77764665-77764684 None:intergenic 15.0%
!! AATGTAAATTGTAGTAATAA+TGG + chr4_1:77764911-77764930 None:intergenic 15.0%
!!! ATTTTTTTACTTTCAAAAAG+TGG - chr4_1:77765175-77765194 Msa0574310:intron 15.0%
!! CAATATAGAAATATTGTATT+GGG + chr4_1:77765223-77765242 None:intergenic 15.0%
!!! TTTACTAAGAAATTTTTTCA+AGG - chr4_1:77766152-77766171 Msa0574310:intron 15.0%
!!! TTACTAAGAAATTTTTTCAA+GGG - chr4_1:77766153-77766172 Msa0574310:intron 15.0%
!!! TCAAATAGAAAATCAATTTT+CGG + chr4_1:77766289-77766308 None:intergenic 15.0%
!! ACATAAATTGAAATTACTTA+CGG + chr4_1:77767635-77767654 None:intergenic 15.0%
!! GAATCATTATTAATTACTAT+CGG - chr4_1:77767728-77767747 Msa0574310:intron 15.0%
!! TTCTTATTATTAATACGATA+AGG + chr4_1:77767916-77767935 None:intergenic 15.0%
!! AAATTAATCTAACTTAAAAC+AGG + chr4_1:77768536-77768555 None:intergenic 15.0%
!! GTAAATTTATTATGATTGTA+TGG - chr4_1:77768757-77768776 Msa0574310:intron 15.0%
!!! TGTAAATTATTTGTTGTTAT+AGG - chr4_1:77769137-77769156 Msa0574310:five_prime_UTR 15.0%
!!! TTGTATTTTTTTTTTTTTCC+TGG - chr4_1:77769328-77769347 Msa0574310:five_prime_UTR 15.0%
!!! TAATCTTATTATTTTGGTAA+AGG - chr4_1:77769392-77769411 Msa0574310:five_prime_UTR 15.0%
!!! TCTCTTTTATACCAATTTTT+AGG - chr4_1:77761456-77761475 Msa0574310:three_prime_UTR 20.0%
!!! CTCTTTTATACCAATTTTTA+GGG - chr4_1:77761457-77761476 Msa0574310:three_prime_UTR 20.0%
!!! ATGATCAAAATCAATTTTCA+CGG + chr4_1:77761777-77761796 None:intergenic 20.0%
!!! TATGCCATTTAATATACTAT+AGG - chr4_1:77762343-77762362 Msa0574310:CDS 20.0%
!! TTGTCCTATAGTATATTAAA+TGG + chr4_1:77762350-77762369 None:intergenic 20.0%
!! ATTAATTATTCAAGATGAAG+GGG - chr4_1:77762526-77762545 Msa0574310:intron 20.0%
!! TTCGAAAGAAGTAAAATAAA+TGG - chr4_1:77762742-77762761 Msa0574310:intron 20.0%
!! TTGTTAATAAAATGTGTAGT+AGG + chr4_1:77762798-77762817 None:intergenic 20.0%
!! TTTAATAAAAGATTCAGTGT+TGG + chr4_1:77763260-77763279 None:intergenic 20.0%
!! TGTTGAATAGATATTTCTTA+AGG - chr4_1:77763896-77763915 Msa0574310:intron 20.0%
!!! TACTAAATATGTTTTTCCTT+TGG - chr4_1:77764100-77764119 Msa0574310:CDS 20.0%
!!! GATACACTAAATTTTATTGT+AGG - chr4_1:77764726-77764745 Msa0574310:CDS 20.0%
!! CTTAATGAAATGAAAATGTT+GGG - chr4_1:77764843-77764862 Msa0574310:CDS 20.0%
!! TTAATGAAATGAAAATGTTG+GGG - chr4_1:77764844-77764863 Msa0574310:CDS 20.0%
!!! GTAATAATGGAAAATAAGTT+AGG + chr4_1:77764898-77764917 None:intergenic 20.0%
!!! TTATTGGTTCAATTTGTTTA+CGG - chr4_1:77764939-77764958 Msa0574310:CDS 20.0%
!! CCAATATAGAAATATTGTAT+TGG + chr4_1:77765224-77765243 None:intergenic 20.0%
!!! CCAATACAATATTTCTATAT+TGG - chr4_1:77765221-77765240 Msa0574310:intron 20.0%
!! TATTCAATTAGTGCTTAATT+AGG + chr4_1:77765299-77765318 None:intergenic 20.0%
!! CTTAGTAAAGAAAGTAAATA+CGG + chr4_1:77766141-77766160 None:intergenic 20.0%
!! AGTTCAATATAATAATGTGA+TGG - chr4_1:77767418-77767437 Msa0574310:intron 20.0%
!! GTATTAATAATAAGAACGAT+GGG - chr4_1:77767920-77767939 Msa0574310:intron 20.0%
!! AGGCAAAAAAATAATTGATT+GGG + chr4_1:77768382-77768401 None:intergenic 20.0%
!! TAGGCAAAAAAATAATTGAT+TGG + chr4_1:77768383-77768402 None:intergenic 20.0%
!! AAATAAAGTTCAAATAGCAT+AGG + chr4_1:77768402-77768421 None:intergenic 20.0%
!!! TTAGATTAATTTTTTGCTCT+TGG - chr4_1:77768544-77768563 Msa0574310:intron 20.0%
!! TGTGTGTTTATTATGAATAA+CGG + chr4_1:77768637-77768656 None:intergenic 20.0%
!!! TTCCTGTAATCTTATTATTT+TGG - chr4_1:77769386-77769405 Msa0574310:five_prime_UTR 20.0%
!! TACCAAAATAATAAGATTAC+AGG + chr4_1:77769391-77769410 None:intergenic 20.0%
! AAAGAAAGAGTGAAGAAAAA+GGG + chr4_1:77761249-77761268 None:intergenic 25.0%
!!! TTTGGAAATTTCTAGAATCT+AGG - chr4_1:77761680-77761699 Msa0574310:CDS 25.0%
!! ATGGATGATGATCATATTTT+CGG - chr4_1:77761711-77761730 Msa0574310:CDS 25.0%
! AGTGAATAAATCATGTTTGA+GGG - chr4_1:77761894-77761913 Msa0574310:intron 25.0%
!! CTATGTTTGAATTCAGTTTT+TGG + chr4_1:77762046-77762065 None:intergenic 25.0%
! GTTAATTTCTTTGTAGTTCT+TGG - chr4_1:77762065-77762084 Msa0574310:intron 25.0%
! TTATTTGTGAATTGCTTGAT+TGG - chr4_1:77762113-77762132 Msa0574310:intron 25.0%
! TATATAACAGCAGCAAAAAA+TGG - chr4_1:77762579-77762598 Msa0574310:intron 25.0%
! TCCATAATAACAACCAAAAA+CGG - chr4_1:77762705-77762724 Msa0574310:intron 25.0%
! AAAGTCAATAAAATAGTGAG+AGG - chr4_1:77762869-77762888 Msa0574310:intron 25.0%
! TGGTAACAATCAAGTAATAT+TGG - chr4_1:77762977-77762996 Msa0574310:intron 25.0%
! TACTTTGTAGCAACTTTAAA+TGG - chr4_1:77763160-77763179 Msa0574310:intron 25.0%
! TTTGATTATGCTATAGTGTA+TGG - chr4_1:77763194-77763213 Msa0574310:CDS 25.0%
! CAAAAATAAAACACTATCCA+TGG + chr4_1:77763346-77763365 None:intergenic 25.0%
!!! TCAGAATTTTGTTTATGTCA+TGG - chr4_1:77763399-77763418 Msa0574310:CDS 25.0%
!!! CTCTTTGGTTTTAACTTTAA+TGG + chr4_1:77763432-77763451 None:intergenic 25.0%
! TAGAGGAGACTAATTAATTA+GGG + chr4_1:77763472-77763491 None:intergenic 25.0%
! CAAATTTATCTCTTCATTCA+AGG + chr4_1:77763516-77763535 None:intergenic 25.0%
! AAATTTGTGCATACATATTG+TGG + chr4_1:77763777-77763796 None:intergenic 25.0%
! AATATGTATGCACAAATTTC+TGG - chr4_1:77763778-77763797 Msa0574310:CDS 25.0%
! AGTATACAATTTATGAACTC+TGG + chr4_1:77764084-77764103 None:intergenic 25.0%
!! TTTTTATGTTAATTTCCAGC+CGG - chr4_1:77764180-77764199 Msa0574310:CDS 25.0%
! ATTACTCTTATTGTCATGTT+TGG - chr4_1:77764498-77764517 Msa0574310:intron 25.0%
! GCTTAATGAAATGAAAATGT+TGG - chr4_1:77764842-77764861 Msa0574310:CDS 25.0%
! TAATGAAATGAAAATGTTGG+GGG - chr4_1:77764845-77764864 Msa0574310:CDS 25.0%
! AATAAAATCTTACTCCAACA+TGG + chr4_1:77765001-77765020 None:intergenic 25.0%
!!! TTTTTTGGAATTCAACATGT+AGG - chr4_1:77765027-77765046 Msa0574310:intron 25.0%
!!! TTTTTGGAATTCAACATGTA+GGG - chr4_1:77765028-77765047 Msa0574310:intron 25.0%
!!! CATATTTTAATAAGCTCTTC+AGG + chr4_1:77765413-77765432 None:intergenic 25.0%
! GACTAATGAACAACATATTT+GGG + chr4_1:77765507-77765526 None:intergenic 25.0%
! TGACTAATGAACAACATATT+TGG + chr4_1:77765508-77765527 None:intergenic 25.0%
! CAATGATGTTCTTAATAATG+TGG - chr4_1:77766080-77766099 Msa0574310:CDS 25.0%
! TGGTTTACATGAAATCATTA+TGG - chr4_1:77766203-77766222 Msa0574310:CDS 25.0%
! GAACATCATCAAAATCAATA+AGG + chr4_1:77766422-77766441 None:intergenic 25.0%
! AAATTCTGGTGATAACAATT+GGG - chr4_1:77766512-77766531 Msa0574310:intron 25.0%
! AATTGAAATTACTTACGGTT+GGG + chr4_1:77767630-77767649 None:intergenic 25.0%
! AAATTGAAATTACTTACGGT+TGG + chr4_1:77767631-77767650 None:intergenic 25.0%
! CATTATTAATTACTATCGGT+TGG - chr4_1:77767732-77767751 Msa0574310:intron 25.0%
! ATATATTTATCTTCCACCAA+TGG + chr4_1:77767796-77767815 None:intergenic 25.0%
! AAAACTCAATAACTTAACAG+AGG + chr4_1:77767832-77767851 None:intergenic 25.0%
! CTATTAAAGAAAGCAATCTT+CGG + chr4_1:77767888-77767907 None:intergenic 25.0%
! AAGATTGCTTTCTTTAATAG+AGG - chr4_1:77767888-77767907 Msa0574310:intron 25.0%
! CGTATTAATAATAAGAACGA+TGG - chr4_1:77767919-77767938 Msa0574310:intron 25.0%
! TTTATCATCTGACATTGAAA+AGG - chr4_1:77767978-77767997 Msa0574310:intron 25.0%
!! TTTTCCTAACATAAATTGAC+AGG + chr4_1:77768082-77768101 None:intergenic 25.0%
! TATGTTAGGAAAACAGATAA+TGG - chr4_1:77768089-77768108 Msa0574310:intron 25.0%
! TGCATTAACTGAAAGAATTA+TGG + chr4_1:77768126-77768145 None:intergenic 25.0%
!! GAAATGATAAAAGGTATACT+TGG + chr4_1:77768359-77768378 None:intergenic 25.0%
! GGCAAAAAAATAATTGATTG+GGG + chr4_1:77768381-77768400 None:intergenic 25.0%
! ATGCAAACAGTAAATAGATA+TGG + chr4_1:77768511-77768530 None:intergenic 25.0%
! GTGTGTTTATTATGAATAAC+GGG + chr4_1:77768636-77768655 None:intergenic 25.0%
! ACACTGAATATATAGAATTG+AGG + chr4_1:77768670-77768689 None:intergenic 25.0%
! TTTGTGAAGTAATCTGTTTA+AGG - chr4_1:77768735-77768754 Msa0574310:intron 25.0%
!!! TGGATAGAGTTGATAATTAT+TGG - chr4_1:77768777-77768796 Msa0574310:intron 25.0%
! CAACAAATAATTTACAAGCA+AGG + chr4_1:77769133-77769152 None:intergenic 25.0%
! CAAAGAATAATAATACAACC+AGG + chr4_1:77769349-77769368 None:intergenic 25.0%
!!! ATTCTTTGATTTTGCTATTC+TGG - chr4_1:77769361-77769380 Msa0574310:five_prime_UTR 25.0%
! AGCATGTTAAATTAACTGTT+TGG - chr4_1:77769432-77769451 Msa0574310:five_prime_UTR 25.0%
CAAAGAAAGAGTGAAGAAAA+AGG + chr4_1:77761250-77761269 None:intergenic 30.0%
! CTTTTTCTTCACTCTTTCTT+TGG - chr4_1:77761248-77761267 Msa0574310:three_prime_UTR 30.0%
!! TTTCTGAGTTGGTGAAATTA+CGG + chr4_1:77761302-77761321 None:intergenic 30.0%
!!! TTTTTTGTTTAAGCTGCTGA+CGG + chr4_1:77761388-77761407 None:intergenic 30.0%
AAATTGGTATAAAAGAGACG+TGG + chr4_1:77761454-77761473 None:intergenic 30.0%
TCAGTTAGAACCCTAAAAAT+TGG + chr4_1:77761470-77761489 None:intergenic 30.0%
!!! GACAAGTTTTAGTTAGTGTT+TGG - chr4_1:77761744-77761763 Msa0574310:CDS 30.0%
GAGTGAATAAATCATGTTTG+AGG - chr4_1:77761893-77761912 Msa0574310:intron 30.0%
! ACCGCTAAAATTGATTCTAA+CGG + chr4_1:77761945-77761964 None:intergenic 30.0%
TTTGATGTGTTTAACAGAAG+CGG - chr4_1:77762167-77762186 Msa0574310:intron 30.0%
AAAAATGAACGAACTATTCG+AGG - chr4_1:77762219-77762238 Msa0574310:intron 30.0%
!! TTAAAAAGGTTGGTGTAGAT+AGG + chr4_1:77762506-77762525 None:intergenic 30.0%
GCAAAAAATGGTAGAATAGA+AGG - chr4_1:77762591-77762610 Msa0574310:intron 30.0%
ACCATGTTTGAGCAAAAAAA+AGG - chr4_1:77762624-77762643 Msa0574310:intron 30.0%
!!! ACCTTTTTTTTGCTCAAACA+TGG + chr4_1:77762628-77762647 None:intergenic 30.0%
!!! ACCGTTTTTGGTTGTTATTA+TGG + chr4_1:77762709-77762728 None:intergenic 30.0%
! CAAGTGTATTTTACCGTTTT+TGG + chr4_1:77762721-77762740 None:intergenic 30.0%
! AAATAAATGGTAATGCATCG+AGG - chr4_1:77762755-77762774 Msa0574310:intron 30.0%
AAGATGTAAATTATGACCGA+TGG - chr4_1:77762942-77762961 Msa0574310:intron 30.0%
AGATGTAAATTATGACCGAT+GGG - chr4_1:77762943-77762962 Msa0574310:intron 30.0%
! GTAAAAAAGAAGTGTATCAC+AGG + chr4_1:77763007-77763026 None:intergenic 30.0%
ATCTACAGAATCATATGCAT+GGG - chr4_1:77763028-77763047 Msa0574310:CDS 30.0%
AGCGAGACATGTATAAATAA+TGG - chr4_1:77763065-77763084 Msa0574310:intron 30.0%
GAGACATGTATAAATAATGG+AGG - chr4_1:77763068-77763087 Msa0574310:intron 30.0%
! ATGTATAAATAATGGAGGCA+TGG - chr4_1:77763073-77763092 Msa0574310:intron 30.0%
! TGTATAAATAATGGAGGCAT+GGG - chr4_1:77763074-77763093 Msa0574310:intron 30.0%
CAGAGTTAGATATTTGCAAT+CGG - chr4_1:77763302-77763321 Msa0574310:intron 30.0%
CTAGAGGAGACTAATTAATT+AGG + chr4_1:77763473-77763492 None:intergenic 30.0%
AACAAGAGAGTAAGAAACAA+GGG + chr4_1:77763749-77763768 None:intergenic 30.0%
TAACAAGAGAGTAAGAAACA+AGG + chr4_1:77763750-77763769 None:intergenic 30.0%
! TTGTTTCTTACTCTCTTGTT+AGG - chr4_1:77763749-77763768 Msa0574310:CDS 30.0%
TGTTTCTTACTCTCTTGTTA+GGG - chr4_1:77763750-77763769 Msa0574310:CDS 30.0%
ACAACATGATATATTGCCAA+AGG + chr4_1:77764119-77764138 None:intergenic 30.0%
! TTTTATGTTAATTTCCAGCC+GGG - chr4_1:77764181-77764200 Msa0574310:CDS 30.0%
!! GTTTTGGCACATATAAGAAT+TGG + chr4_1:77764293-77764312 None:intergenic 30.0%
AATATGTAACATCAATGGAG+CGG + chr4_1:77764332-77764351 None:intergenic 30.0%
! TTTTATCAAGCGTGTTTATG+TGG - chr4_1:77764548-77764567 Msa0574310:intron 30.0%
GAGTACATTATATCTGATAG+AGG + chr4_1:77764643-77764662 None:intergenic 30.0%
AATGTTGGGGGAAATAAAAT+TGG - chr4_1:77764857-77764876 Msa0574310:CDS 30.0%
! ATATGTGTTGATGCTTTATG+TGG - chr4_1:77765074-77765093 Msa0574310:intron 30.0%
AAATATTGTATTGGGAAGTG+TGG + chr4_1:77765215-77765234 None:intergenic 30.0%
CTTAATTAGGTCATCTATCA+GGG + chr4_1:77765286-77765305 None:intergenic 30.0%
TTATATGAGAAACACTTGCA+TGG + chr4_1:77765330-77765349 None:intergenic 30.0%
!!! ACGATTGTTTTTGTGTAAGT+TGG - chr4_1:77765376-77765395 Msa0574310:intron 30.0%
AATATGCCAAAAGTAGATCA+TGG - chr4_1:77765427-77765446 Msa0574310:intron 30.0%
TATCACTTGTATGAGTGTTT+GGG + chr4_1:77765482-77765501 None:intergenic 30.0%
TTATCACTTGTATGAGTGTT+TGG + chr4_1:77765483-77765502 None:intergenic 30.0%
! TACTAGTTTAAGGGTGTATT+TGG + chr4_1:77765533-77765552 None:intergenic 30.0%
TGTTCATATGTATCCTCATA+AGG + chr4_1:77765699-77765718 None:intergenic 30.0%
GAAGATAATCGTATAACTGA+TGG - chr4_1:77765867-77765886 Msa0574310:intron 30.0%
ATGTAAACCATGTCTAGTAA+TGG + chr4_1:77766193-77766212 None:intergenic 30.0%
!!! AAAAGAGCCTTTTTTCCATT+AGG + chr4_1:77766240-77766259 None:intergenic 30.0%
! AATGGAAAAAAGGCTCTTTT+TGG - chr4_1:77766240-77766259 Msa0574310:intron 30.0%
! TGTTATCACCAGAATTTGTT+GGG + chr4_1:77766509-77766528 None:intergenic 30.0%
TTGTTATCACCAGAATTTGT+TGG + chr4_1:77766510-77766529 None:intergenic 30.0%
CAAATTCTGGTGATAACAAT+TGG - chr4_1:77766511-77766530 Msa0574310:intron 30.0%
! CTGAGTGATATTTCTATGAA+AGG + chr4_1:77767062-77767081 None:intergenic 30.0%
ATTTCTCAAAGGTTGTCAAT+GGG - chr4_1:77767140-77767159 Msa0574310:intron 30.0%
TAAGAAAATGTATCATGCTG+TGG + chr4_1:77767507-77767526 None:intergenic 30.0%
! AATGGATTTGTAGATTGTGA+TGG + chr4_1:77767574-77767593 None:intergenic 30.0%
ATTGAAATTACTTACGGTTG+GGG + chr4_1:77767629-77767648 None:intergenic 30.0%
TCACAAAACCTATGTAAAAG+AGG + chr4_1:77767698-77767717 None:intergenic 30.0%
ATTGCCTGTCAATTTATGTT+AGG - chr4_1:77768075-77768094 Msa0574310:intron 30.0%
! TTTGGTTGATGCTTTATGAT+TGG - chr4_1:77768149-77768168 Msa0574310:intron 30.0%
ATTGATTACCCATGTTTGAA+GGG + chr4_1:77768253-77768272 None:intergenic 30.0%
TTGATTGGGGAAATGATAAA+AGG + chr4_1:77768368-77768387 None:intergenic 30.0%
ATAAACCGTGTAAAATCTCA+GGG - chr4_1:77768427-77768446 Msa0574310:intron 30.0%
!!! AATTTTTTGCTCTTGGAAAG+TGG - chr4_1:77768551-77768570 Msa0574310:intron 30.0%
!! GAGTTGATAATTATTGGTTG+TGG - chr4_1:77768783-77768802 Msa0574310:intron 30.0%
AATATAGATCAGCAACTGAA+TGG - chr4_1:77768896-77768915 Msa0574310:intron 30.0%
AAATCTTAAGATCATCCGAA+TGG + chr4_1:77768971-77768990 None:intergenic 30.0%
! TGATCTTAAGATTTTCTGCT+CGG - chr4_1:77768977-77768996 Msa0574310:intron 30.0%
ACTTCAACCATATTTGTACA+GGG + chr4_1:77769038-77769057 None:intergenic 30.0%
AACTTCAACCATATTTGTAC+AGG + chr4_1:77769039-77769058 None:intergenic 30.0%
TGTTGTTATAGGAAAGATGA+AGG - chr4_1:77769148-77769167 Msa0574310:five_prime_UTR 30.0%
AGATGCTTAATAGTGTGTTA+TGG - chr4_1:77769296-77769315 Msa0574310:five_prime_UTR 30.0%
! GTAAAGGTCTTTTCTATTCA+TGG - chr4_1:77769408-77769427 Msa0574310:five_prime_UTR 30.0%
ATAGTGGTATAGAACTCAAT+CGG + chr4_1:77769462-77769481 None:intergenic 30.0%
ATTGAGTTCTATACCACTAT+AGG - chr4_1:77769462-77769481 Msa0574310:five_prime_UTR 30.0%
TGAAGAAAAAGGGAAGAAAG+GGG + chr4_1:77761239-77761258 None:intergenic 35.0%
GTGAAGAAAAAGGGAAGAAA+GGG + chr4_1:77761240-77761259 None:intergenic 35.0%
AGTGAAGAAAAAGGGAAGAA+AGG + chr4_1:77761241-77761260 None:intergenic 35.0%
! TCTTCTTCTTCTTAGTTCTC+AGG - chr4_1:77761537-77761556 Msa0574310:three_prime_UTR 35.0%
CAGATCAGCATACAAATTGA+AGG + chr4_1:77761600-77761619 None:intergenic 35.0%
TAGAATCTAGGTGCATTGTA+TGG - chr4_1:77761692-77761711 Msa0574310:CDS 35.0%
! CCGCTAAAATTGATTCTAAC+GGG + chr4_1:77761944-77761963 None:intergenic 35.0%
! CCCGTTAGAATCAATTTTAG+CGG - chr4_1:77761941-77761960 Msa0574310:intron 35.0%
ATTGCTTGATTGGATTGACT+TGG - chr4_1:77762123-77762142 Msa0574310:intron 35.0%
CAGTTAATGCATCTTCGATT+CGG + chr4_1:77762261-77762280 None:intergenic 35.0%
TACAAGTCACAATGATGTAG+TGG - chr4_1:77762402-77762421 Msa0574310:CDS 35.0%
ATGTAGTGGTAACCATTCAA+TGG - chr4_1:77762416-77762435 Msa0574310:CDS 35.0%
TGTAGTGGTAACCATTCAAT+GGG - chr4_1:77762417-77762436 Msa0574310:CDS 35.0%
ATTTCTACAAAGTTCGCCTT+AGG + chr4_1:77762464-77762483 None:intergenic 35.0%
!! AAGGGGTTGTTATTTGTCAA+CGG - chr4_1:77762543-77762562 Msa0574310:intron 35.0%
GATGTAAATTATGACCGATG+GGG - chr4_1:77762944-77762963 Msa0574310:intron 35.0%
CATGCATATGATTCTGTAGA+TGG + chr4_1:77763029-77763048 None:intergenic 35.0%
CATCTACAGAATCATATGCA+TGG - chr4_1:77763027-77763046 Msa0574310:CDS 35.0%
GCTAAAAAGCAATGTAAACG+AGG + chr4_1:77763127-77763146 None:intergenic 35.0%
!!! TGCATTTTTTGCTATTCGAC+AGG - chr4_1:77763364-77763383 Msa0574310:intron 35.0%
GAGACTAATTAATTAGGGCA+GGG + chr4_1:77763467-77763486 None:intergenic 35.0%
TGTTATAGCAAGGAATCTAG+AGG + chr4_1:77763489-77763508 None:intergenic 35.0%
TCAAGGTTTCTGTTATAGCA+AGG + chr4_1:77763499-77763518 None:intergenic 35.0%
! GTACGCTTTGATTTAAGTGT+TGG - chr4_1:77763615-77763634 Msa0574310:intron 35.0%
TTCTGAACGTAGCTAAGAAA+TGG - chr4_1:77763686-77763705 Msa0574310:CDS 35.0%
ACAAGAGAGTAAGAAACAAG+GGG + chr4_1:77763748-77763767 None:intergenic 35.0%
GGCAATATATCATGTTGTAC+TGG - chr4_1:77764121-77764140 Msa0574310:CDS 35.0%
TATCATGTTGTACTGGAGAT+AGG - chr4_1:77764128-77764147 Msa0574310:CDS 35.0%
TTACTCGATGAGTAAATTCC+CGG + chr4_1:77764202-77764221 None:intergenic 35.0%
TCGAGTAAAATCAATCTCCA+TGG - chr4_1:77764214-77764233 Msa0574310:CDS 35.0%
TTGTGCAGTAAATTTAGCCA+TGG + chr4_1:77764234-77764253 None:intergenic 35.0%
ACTCATTCTTTACCTGATAG+CGG - chr4_1:77764428-77764447 Msa0574310:intron 35.0%
TTTACAACCTTTACTCTTGG+AGG + chr4_1:77764609-77764628 None:intergenic 35.0%
CACTTTACAACCTTTACTCT+TGG + chr4_1:77764612-77764631 None:intergenic 35.0%
CACATATTGCACAACAACAT+TGG + chr4_1:77765061-77765080 None:intergenic 35.0%
TGTTGATGCTTTATGTGGAT+TGG - chr4_1:77765079-77765098 Msa0574310:intron 35.0%
GTTGATGCTTTATGTGGATT+GGG - chr4_1:77765080-77765099 Msa0574310:intron 35.0%
TTTCTTAACTATTTCCCCAC+AGG + chr4_1:77765121-77765140 None:intergenic 35.0%
GCTTAATTAGGTCATCTATC+AGG + chr4_1:77765287-77765306 None:intergenic 35.0%
! ACATGTCCATGATCTACTTT+TGG + chr4_1:77765436-77765455 None:intergenic 35.0%
! CCAAGTGTGTACTAGTTTAA+GGG + chr4_1:77765542-77765561 None:intergenic 35.0%
CATATGTATCCTCATAAGGA+AGG + chr4_1:77765695-77765714 None:intergenic 35.0%
AACTAGACCTATCACTGAAA+CGG + chr4_1:77765722-77765741 None:intergenic 35.0%
TGTCTTTCTTGATCATATCC+AGG + chr4_1:77765759-77765778 None:intergenic 35.0%
CATCTCCAAATCTATCTTCA+CGG + chr4_1:77765836-77765855 None:intergenic 35.0%
AAGATAGATTTGGAGATGGA+CGG - chr4_1:77765838-77765857 Msa0574310:intron 35.0%
GATAATCGTATAACTGATGG+AGG - chr4_1:77765870-77765889 Msa0574310:intron 35.0%
!! AACTGATGGAGGTATTAAGA+TGG - chr4_1:77765881-77765900 Msa0574310:intron 35.0%
TCTCCCAAAATTTCTCTAAC+AGG + chr4_1:77765969-77765988 None:intergenic 35.0%
AATGTGGCTCAGTATTTACT+TGG - chr4_1:77766096-77766115 Msa0574310:intron 35.0%
TTCCTTTCCATTACTAGACA+TGG - chr4_1:77766183-77766202 Msa0574310:CDS 35.0%
! AACCATGTCTAGTAATGGAA+AGG + chr4_1:77766188-77766207 None:intergenic 35.0%
TCTGCAATCATAGTAGTCAA+AGG + chr4_1:77766326-77766345 None:intergenic 35.0%
ACTACTATGATTGCAGAGAA+CGG - chr4_1:77766329-77766348 Msa0574310:intron 35.0%
AAGTTAAGCTTGAGACTATC+AGG - chr4_1:77766394-77766413 Msa0574310:CDS 35.0%
ATTGTGAACCCAACAAATTC+TGG - chr4_1:77766498-77766517 Msa0574310:intron 35.0%
! CGAGTGGATTTACATTTGAA+AGG + chr4_1:77766578-77766597 None:intergenic 35.0%
ACTTGATCAGGTAAAGATGA+TGG + chr4_1:77766627-77766646 None:intergenic 35.0%
TCTTTACCTGATCAAGTTTC+TGG - chr4_1:77766630-77766649 Msa0574310:intron 35.0%
AATGTTACGATACTGCTCAA+AGG + chr4_1:77766690-77766709 None:intergenic 35.0%
TGCAGGTGAAACAGATAAAA+AGG + chr4_1:77766728-77766747 None:intergenic 35.0%
! TTTTTATCTGTTTCACCTGC+AGG - chr4_1:77766727-77766746 Msa0574310:intron 35.0%
! TTTTATCTGTTTCACCTGCA+GGG - chr4_1:77766728-77766747 Msa0574310:intron 35.0%
GGTGTAGATTGTTGAATAGT+AGG + chr4_1:77766946-77766965 None:intergenic 35.0%
! TTGACAACCTTTGAGAAATG+TGG + chr4_1:77767139-77767158 None:intergenic 35.0%
CATTTCTCAAAGGTTGTCAA+TGG - chr4_1:77767139-77767158 Msa0574310:intron 35.0%
TTTCTCAAAGGTTGTCAATG+GGG - chr4_1:77767141-77767160 Msa0574310:intron 35.0%
TAAGAAGTCGATAATACCTC+AGG + chr4_1:77767232-77767251 None:intergenic 35.0%
AAAGCGGTAAGCTAATGATT+TGG + chr4_1:77767455-77767474 None:intergenic 35.0%
! CCACGGATTAAGTTATAAAG+CGG + chr4_1:77767471-77767490 None:intergenic 35.0%
TTTGTAGATTGTGATGGTTG+TGG + chr4_1:77767568-77767587 None:intergenic 35.0%
! GCACATTTCCTCTTTTACAT+AGG - chr4_1:77767687-77767706 Msa0574310:intron 35.0%
!! ATTACTATCGGTTGGTGATT+TGG - chr4_1:77767740-77767759 Msa0574310:intron 35.0%
TAATAAGAACGATGGGTAAC+TGG - chr4_1:77767927-77767946 Msa0574310:intron 35.0%
! CTTTCAGTTAATGCACGTTT+TGG - chr4_1:77768131-77768150 Msa0574310:intron 35.0%
ATAGAAGGAAACTGCATTCA+AGG + chr4_1:77768179-77768198 None:intergenic 35.0%
GATTGATTACCCATGTTTGA+AGG + chr4_1:77768254-77768273 None:intergenic 35.0%
CATAAACCGTGTAAAATCTC+AGG - chr4_1:77768426-77768445 Msa0574310:intron 35.0%
TAAACCGTGTAAAATCTCAG+GGG - chr4_1:77768428-77768447 Msa0574310:intron 35.0%
TGAAATAGTTACCTTGGCAT+TGG + chr4_1:77768486-77768505 None:intergenic 35.0%
! ATGGACTGAAATAGTTACCT+TGG + chr4_1:77768492-77768511 None:intergenic 35.0%
!!! AATTGGGACTTTTGGTAATG+AGG - chr4_1:77768853-77768872 Msa0574310:intron 35.0%
!!! ATTGGGACTTTTGGTAATGA+GGG - chr4_1:77768854-77768873 Msa0574310:intron 35.0%
CTTCAACCATATTTGTACAG+GGG + chr4_1:77769037-77769056 None:intergenic 35.0%
AATTACTCGTCTAGGAGAAA+GGG + chr4_1:77769251-77769270 None:intergenic 35.0%
CCTAAAACAATTACTCGTCT+AGG + chr4_1:77769259-77769278 None:intergenic 35.0%
! CCTAGACGAGTAATTGTTTT+AGG - chr4_1:77769256-77769275 Msa0574310:five_prime_UTR 35.0%
ATAGTGTGTTATGGTGATCA+TGG - chr4_1:77769305-77769324 Msa0574310:five_prime_UTR 35.0%
TAGTGGTATAGAACTCAATC+GGG + chr4_1:77769461-77769480 None:intergenic 35.0%
GAAGAAAAAGGGAAGAAAGG+GGG + chr4_1:77761238-77761257 None:intergenic 40.0%
AGAGAGAGATCTTTCTGAGT+TGG + chr4_1:77761313-77761332 None:intergenic 40.0%
GGAGATGACAAGTAGACTAA+AGG - chr4_1:77762188-77762207 Msa0574310:intron 40.0%
ATGCATTAACTGCAACAGCA+TGG - chr4_1:77762269-77762288 Msa0574310:CDS 40.0%
ATTTCACTTGCTTGAAGAGC+AGG + chr4_1:77762307-77762326 None:intergenic 40.0%
TAGAGAACTTAAGAGGCCTA+AGG - chr4_1:77762445-77762464 Msa0574310:intron 40.0%
ACAAGCTTACGTCAGTAAAG+TGG - chr4_1:77762898-77762917 Msa0574310:intron 40.0%
CAAGCTTACGTCAGTAAAGT+GGG - chr4_1:77762899-77762918 Msa0574310:intron 40.0%
TAAATTATGACCGATGGGGA+GGG - chr4_1:77762948-77762967 Msa0574310:intron 40.0%
! ATAAATAATGGAGGCATGGG+TGG - chr4_1:77763077-77763096 Msa0574310:intron 40.0%
GGGAACTGCTATAATCTCTT+TGG + chr4_1:77763447-77763466 None:intergenic 40.0%
GGAGACTAATTAATTAGGGC+AGG + chr4_1:77763468-77763487 None:intergenic 40.0%
CAAGAGAGTAAGAAACAAGG+GGG + chr4_1:77763747-77763766 None:intergenic 40.0%
TTTGTTTGCACAAACTGCAG+TGG - chr4_1:77763804-77763823 Msa0574310:CDS 40.0%
GTACTGTTGTCGAAATGTTG+AGG - chr4_1:77763865-77763884 Msa0574310:intron 40.0%
GAAGTTAGTGCACTTCAAGA+AGG - chr4_1:77764254-77764273 Msa0574310:CDS 40.0%
ACTTCAAGAAGGAGGAAATC+AGG - chr4_1:77764265-77764284 Msa0574310:intron 40.0%
CTCATTCTTTACCTGATAGC+GGG - chr4_1:77764429-77764448 Msa0574310:intron 40.0%
ACAAATACTTACCCGCTATC+AGG + chr4_1:77764443-77764462 None:intergenic 40.0%
CCAGTAATGTTGACAGGATT+CGG - chr4_1:77764523-77764542 Msa0574310:intron 40.0%
CAGTAATGTTGACAGGATTC+GGG - chr4_1:77764524-77764543 Msa0574310:intron 40.0%
TCAAGCGTGTTTATGTGGAT+AGG - chr4_1:77764553-77764572 Msa0574310:intron 40.0%
TATGTGGATAGGAGATTCAC+TGG - chr4_1:77764564-77764583 Msa0574310:CDS 40.0%
TACTCTTGGAGGTTTGTCAT+AGG + chr4_1:77764598-77764617 None:intergenic 40.0%
TGACAAACCTCCAAGAGTAA+AGG - chr4_1:77764599-77764618 Msa0574310:CDS 40.0%
GGGGGAAATAAAATTGGTAC+TGG - chr4_1:77764863-77764882 Msa0574310:CDS 40.0%
CCCTTAAACTAGTACACACT+TGG - chr4_1:77765539-77765558 Msa0574310:intron 40.0%
! GCCAAGTGTGTACTAGTTTA+AGG + chr4_1:77765543-77765562 None:intergenic 40.0%
ACCAAAAAGCCTTCCTTATG+AGG - chr4_1:77765683-77765702 Msa0574310:intron 40.0%
! TCCTCATAAGGAAGGCTTTT+TGG + chr4_1:77765687-77765706 None:intergenic 40.0%
ATGAACACCGTTTCAGTGAT+AGG - chr4_1:77765712-77765731 Msa0574310:intron 40.0%
! TTCAGTGATAGGTCTAGTTC+AGG - chr4_1:77765723-77765742 Msa0574310:intron 40.0%
! AGTCATTGATTATTGGAGGG+CGG + chr4_1:77765809-77765828 None:intergenic 40.0%
! GCCAGTCATTGATTATTGGA+GGG + chr4_1:77765812-77765831 None:intergenic 40.0%
CGTGAAGATAGATTTGGAGA+TGG - chr4_1:77765834-77765853 Msa0574310:intron 40.0%
CCAAAATTTCTCTAACAGGC+CGG + chr4_1:77765965-77765984 None:intergenic 40.0%
! CGGCCTGTTAGAGAAATTTT+GGG - chr4_1:77765963-77765982 Msa0574310:intron 40.0%
!!! CTTTTTTCCATTAGGTGGGT+GGG + chr4_1:77766232-77766251 None:intergenic 40.0%
!!! GAGCCTTTTTTCCATTAGGT+GGG + chr4_1:77766236-77766255 None:intergenic 40.0%
!!! AGAGCCTTTTTTCCATTAGG+TGG + chr4_1:77766237-77766256 None:intergenic 40.0%
TTCTGATGAGGTTCCATTAC+TGG + chr4_1:77766376-77766395 None:intergenic 40.0%
CTCAAGCTTAACTTCTGATG+AGG + chr4_1:77766388-77766407 None:intergenic 40.0%
TGAGGAATTACTGGAGCAAT+AGG + chr4_1:77766453-77766472 None:intergenic 40.0%
!! ACCTGAGGTAAAAGTATCTC+AGG - chr4_1:77766551-77766570 Msa0574310:intron 40.0%
!! CCTGAGGTAAAAGTATCTCA+GGG - chr4_1:77766552-77766571 Msa0574310:intron 40.0%
!! AGATGATGGAACTGACAACT+GGG + chr4_1:77766613-77766632 None:intergenic 40.0%
!! AAGATGATGGAACTGACAAC+TGG + chr4_1:77766614-77766633 None:intergenic 40.0%
CTAATGAAGCAACACTGGAT+GGG + chr4_1:77766819-77766838 None:intergenic 40.0%
AGATGCTAATGAAGCAACAC+TGG + chr4_1:77766824-77766843 None:intergenic 40.0%
GTTGCTTCATTAGCATCTTC+TGG - chr4_1:77766826-77766845 Msa0574310:CDS 40.0%
AGCATCTTCTGGATTGACAA+TGG - chr4_1:77766837-77766856 Msa0574310:intron 40.0%
! CATGGGAGTGCATTATTGAA+AGG + chr4_1:77766868-77766887 None:intergenic 40.0%
CTTTCAATAATGCACTCCCA+TGG - chr4_1:77766866-77766885 Msa0574310:intron 40.0%
GATACTGCAAATTAGGCCAT+GGG + chr4_1:77766885-77766904 None:intergenic 40.0%
TGATACTGCAAATTAGGCCA+TGG + chr4_1:77766886-77766905 None:intergenic 40.0%
TGCTGCTGATACTGCAAATT+AGG + chr4_1:77766892-77766911 None:intergenic 40.0%
TTATTCAAAGCTCCACCTAC+TGG + chr4_1:77766970-77766989 None:intergenic 40.0%
GCGTCTTAATAAGACAAACC+TGG + chr4_1:77766993-77767012 None:intergenic 40.0%
GGGAACAGAAGATGTATTAC+AGG + chr4_1:77767086-77767105 None:intergenic 40.0%
GTGTCTACAGTAGAAGTTTG+TGG + chr4_1:77767184-77767203 None:intergenic 40.0%
ACTGTAGACACAAAACCAAG+TGG - chr4_1:77767193-77767212 Msa0574310:intron 40.0%
GGAAGTTCATTTCTTCCACT+TGG + chr4_1:77767211-77767230 None:intergenic 40.0%
TGGAAGAAATGAACTTCCTG+AGG - chr4_1:77767213-77767232 Msa0574310:intron 40.0%
TCTTTCACTGTGATTTCTGC+AGG - chr4_1:77767313-77767332 Msa0574310:intron 40.0%
CCGCTTTATAACTTAATCCG+TGG - chr4_1:77767468-77767487 Msa0574310:intron 40.0%
AATGTATCATGCTGTGGTAC+TGG + chr4_1:77767501-77767520 None:intergenic 40.0%
TGTGATGGTTGTGGAAAACT+CGG + chr4_1:77767559-77767578 None:intergenic 40.0%
GGTTCGTTGATCACATCAAA+TGG + chr4_1:77767592-77767611 None:intergenic 40.0%
AATGTGCACAAACTATCACC+AGG + chr4_1:77767674-77767693 None:intergenic 40.0%
CTAAAGCACATCATGCACTT+TGG + chr4_1:77767771-77767790 None:intergenic 40.0%
!! ATGATGTGCTTTAGAGCCAT+TGG - chr4_1:77767777-77767796 Msa0574310:intron 40.0%
GATGGGTAACTGGTATATGA+TGG - chr4_1:77767937-77767956 Msa0574310:intron 40.0%
TCATCTGACATTGAAAAGGC+TGG - chr4_1:77767982-77768001 Msa0574310:intron 40.0%
AAAGGCTGGAATGTTGAAGT+AGG - chr4_1:77767996-77768015 Msa0574310:intron 40.0%
CCTTGCAAAGATGACATAGA+AGG + chr4_1:77768194-77768213 None:intergenic 40.0%
CCTTCTATGTCATCTTTGCA+AGG - chr4_1:77768191-77768210 Msa0574310:intron 40.0%
TGCAGTAAACCCTTCAAACA+TGG - chr4_1:77768241-77768260 Msa0574310:intron 40.0%
GCAGTAAACCCTTCAAACAT+GGG - chr4_1:77768242-77768261 Msa0574310:intron 40.0%
TGGGTAATCAATCTCTTTCC+TGG - chr4_1:77768261-77768280 Msa0574310:intron 40.0%
CATGAATATGTGCTTGTGGA+GGG + chr4_1:77768322-77768341 None:intergenic 40.0%
ACATATTCATGCCTCAGCAA+TGG - chr4_1:77768331-77768350 Msa0574310:intron 40.0%
CATATTCATGCCTCAGCAAT+GGG - chr4_1:77768332-77768351 Msa0574310:intron 40.0%
! ATTCAGTGTTGTTGCTTGAG+TGG - chr4_1:77768681-77768700 Msa0574310:intron 40.0%
! TTCAGTGTTGTTGCTTGAGT+GGG - chr4_1:77768682-77768701 Msa0574310:intron 40.0%
ACACATTCAGTTACGTGTCA+AGG + chr4_1:77768822-77768841 None:intergenic 40.0%
TGACACGTAACTGAATGTGT+AGG - chr4_1:77768822-77768841 Msa0574310:intron 40.0%
AACTGAATGTGTAGGCATCA+AGG - chr4_1:77768830-77768849 Msa0574310:intron 40.0%
ATGTGTAGGCATCAAGGAAT+TGG - chr4_1:77768836-77768855 Msa0574310:intron 40.0%
TGTGTAGGCATCAAGGAATT+GGG - chr4_1:77768837-77768856 Msa0574310:intron 40.0%
! CATCAAGGAATTGGGACTTT+TGG - chr4_1:77768845-77768864 Msa0574310:intron 40.0%
TAGATCAGCAACTGAATGGT+AGG - chr4_1:77768900-77768919 Msa0574310:intron 40.0%
TGTACCATTCTTTAGTCGAG+AGG - chr4_1:77769062-77769081 Msa0574310:intron 40.0%
GTTTCCTCTCGACTAAAGAA+TGG + chr4_1:77769069-77769088 None:intergenic 40.0%
CCAAATATCTGCCTGTCAAT+GGG - chr4_1:77769171-77769190 Msa0574310:five_prime_UTR 40.0%
TGAGCTGATGAATTCGAGAA+AGG - chr4_1:77769215-77769234 Msa0574310:five_prime_UTR 40.0%
CAATTACTCGTCTAGGAGAA+AGG + chr4_1:77769252-77769271 None:intergenic 40.0%
ATTAAGCATCTGACGCTACA+AGG + chr4_1:77769287-77769306 None:intergenic 40.0%
AAAAGGGAAGAAAGGGGGTA+AGG + chr4_1:77761233-77761252 None:intergenic 45.0%
GCTTTGTACAGCTCAGAATG+AGG + chr4_1:77761280-77761299 None:intergenic 45.0%
AGAAAGATCTCTCTCTTCCC+TGG - chr4_1:77761317-77761336 Msa0574310:three_prime_UTR 45.0%
GGCCTCTTAAGTTCTCTACA+CGG + chr4_1:77762443-77762462 None:intergenic 45.0%
!! GGGTTGTTATTTGTCAACGG+TGG - chr4_1:77762546-77762565 Msa0574310:intron 45.0%
GTAAATTATGACCGATGGGG+AGG - chr4_1:77762947-77762966 Msa0574310:intron 45.0%
TGTCTCGCTAAGTTGTCCAT+GGG + chr4_1:77763054-77763073 None:intergenic 45.0%
ATGTCTCGCTAAGTTGTCCA+TGG + chr4_1:77763055-77763074 None:intergenic 45.0%
! ATTTGCAATCGGTTCAAGCG+AGG - chr4_1:77763313-77763332 Msa0574310:intron 45.0%
GTTAGTGCACTTCAAGAAGG+AGG - chr4_1:77764257-77764276 Msa0574310:CDS 45.0%
!! TTGGTGCCAGTAATGTTGAC+AGG - chr4_1:77764517-77764536 Msa0574310:intron 45.0%
CCGAATCCTGTCAACATTAC+TGG + chr4_1:77764526-77764545 None:intergenic 45.0%
GTGTGTATGTCGTGAGTGTA+AGG - chr4_1:77764758-77764777 Msa0574310:CDS 45.0%
ATGGCTACCACAACACAGTA+GGG + chr4_1:77764982-77765001 None:intergenic 45.0%
TCATGCTAACTAGTGCCTGT+GGG - chr4_1:77765103-77765122 Msa0574310:intron 45.0%
TTTCCTTAACTAGTGCCCCA+GGG - chr4_1:77765244-77765263 Msa0574310:intron 45.0%
TCTTGTGCTGCATCTCATAC+AGG - chr4_1:77765608-77765627 Msa0574310:intron 45.0%
CTTGTGCTGCATCTCATACA+GGG - chr4_1:77765609-77765628 Msa0574310:intron 45.0%
AGGATGATTCCTATGACACC+AGG - chr4_1:77765637-77765656 Msa0574310:intron 45.0%
TTCCTATGACACCAGGAAGA+CGG - chr4_1:77765644-77765663 Msa0574310:intron 45.0%
! AGTGATAGGTCTAGTTCAGG+TGG - chr4_1:77765726-77765745 Msa0574310:intron 45.0%
GCCCTCCAATAATCAATGAC+TGG - chr4_1:77765808-77765827 Msa0574310:intron 45.0%
! CGCCAGTCATTGATTATTGG+AGG + chr4_1:77765813-77765832 None:intergenic 45.0%
! CTTTGGCTCGTTCAAGAGAT+TGG + chr4_1:77765911-77765930 None:intergenic 45.0%
! CCGGCCTGTTAGAGAAATTT+TGG - chr4_1:77765962-77765981 Msa0574310:intron 45.0%
TAATGGCTCAACACTCACAC+AGG - chr4_1:77766046-77766065 Msa0574310:CDS 45.0%
!!! CCTTTTTTCCATTAGGTGGG+TGG + chr4_1:77766233-77766252 None:intergenic 45.0%
CCACCCACCTAATGGAAAAA+AGG - chr4_1:77766230-77766249 Msa0574310:intron 45.0%
ATTACTGGATGCCAAGCTAC+TGG + chr4_1:77766361-77766380 None:intergenic 45.0%
AGTAGCTTGGCATCCAGTAA+TGG - chr4_1:77766360-77766379 Msa0574310:CDS 45.0%
GGAATTACTGGAGCAATAGG+TGG + chr4_1:77766450-77766469 None:intergenic 45.0%
TGTGTGGCTTGAGGAATTAC+TGG + chr4_1:77766462-77766481 None:intergenic 45.0%
! ACAGTAGTTTGTGTGGCTTG+AGG + chr4_1:77766471-77766490 None:intergenic 45.0%
TCAAGCCACACAAACTACTG+TGG - chr4_1:77766470-77766489 Msa0574310:intron 45.0%
! TTGAGCCACAGTAGTTTGTG+TGG + chr4_1:77766478-77766497 None:intergenic 45.0%
TACCTCAGGTGCAACATCAA+AGG + chr4_1:77766541-77766560 None:intergenic 45.0%
! CCCTGAGATACTTTTACCTC+AGG + chr4_1:77766555-77766574 None:intergenic 45.0%
TGGACTCCAGAAACTTGATC+AGG + chr4_1:77766639-77766658 None:intergenic 45.0%
!! GATCAAGTTTCTGGAGTCCA+AGG - chr4_1:77766639-77766658 Msa0574310:intron 45.0%
GTTGCGAAGATGTTCACAGT+TGG + chr4_1:77766793-77766812 None:intergenic 45.0%
GCTAATGAAGCAACACTGGA+TGG + chr4_1:77766820-77766839 None:intergenic 45.0%
CCAACAGCAGATGTGAACAA+CGG + chr4_1:77766919-77766938 None:intergenic 45.0%
CAACAATCTACACCACCAGT+AGG - chr4_1:77766952-77766971 Msa0574310:intron 45.0%
!! AGGTGGAGCTTTGAATAACC+AGG - chr4_1:77766972-77766991 Msa0574310:intron 45.0%
GCTAGTGCCACATTTCTCAA+AGG - chr4_1:77767129-77767148 Msa0574310:intron 45.0%
!! GTGGTACTGGCATATAACCA+CGG + chr4_1:77767488-77767507 None:intergenic 45.0%
! TCGGCATGGACTGTAACAAT+GGG + chr4_1:77767540-77767559 None:intergenic 45.0%
!! ATGTGCTTTAGAGCCATTGG+TGG - chr4_1:77767780-77767799 Msa0574310:intron 45.0%
! GGTGCATATGATAACGAGGA+GGG + chr4_1:77768293-77768312 None:intergenic 45.0%
! TGGTGCATATGATAACGAGG+AGG + chr4_1:77768294-77768313 None:intergenic 45.0%
! CGTTGGTGCATATGATAACG+AGG + chr4_1:77768297-77768316 None:intergenic 45.0%
GCATGAATATGTGCTTGTGG+AGG + chr4_1:77768323-77768342 None:intergenic 45.0%
GAGGCATGAATATGTGCTTG+TGG + chr4_1:77768326-77768345 None:intergenic 45.0%
TATACTTGGTCCCATTGCTG+AGG + chr4_1:77768345-77768364 None:intergenic 45.0%
! TACGCCCCTGAGATTTTACA+CGG + chr4_1:77768435-77768454 None:intergenic 45.0%
! TAAAATCTCAGGGGCGTACA+TGG - chr4_1:77768437-77768456 Msa0574310:intron 45.0%
TCACTAATGTGCCAATGCCA+AGG - chr4_1:77768472-77768491 Msa0574310:intron 45.0%
! GAAGGGGTTTAAAGTAGCAG+AGG + chr4_1:77768933-77768952 None:intergenic 45.0%
GGGTGCAACAAATTGATGCT+TGG + chr4_1:77769017-77769036 None:intergenic 45.0%
GTTGCACCCCTGTACAAATA+TGG - chr4_1:77769028-77769047 Msa0574310:intron 45.0%
ACACTCCAGCATAGAGAGAT+CGG - chr4_1:77769087-77769106 Msa0574310:five_prime_UTR 45.0%
GCCAAATATCTGCCTGTCAA+TGG - chr4_1:77769170-77769189 Msa0574310:five_prime_UTR 45.0%
CCCATTGACAGGCAGATATT+TGG + chr4_1:77769174-77769193 None:intergenic 45.0%
!!! TTTACATTAAATTTTATTAT+TGG - chr4_1:77764923-77764942 Msa0574310:CDS 5.0%
!!! GATTTTATTTTTTATTTTTT+TGG - chr4_1:77765012-77765031 Msa0574310:intron 5.0%
ACAGCACAGCACAACAACCA+GGG + chr4_1:77761337-77761356 None:intergenic 50.0%
GTTTAAGCTGCTGACGGTGA+TGG + chr4_1:77761382-77761401 None:intergenic 50.0%
TCTCTACACGGCCCATTGAA+TGG + chr4_1:77762431-77762450 None:intergenic 50.0%
GGCCGTGTAGAGAACTTAAG+AGG - chr4_1:77762438-77762457 Msa0574310:intron 50.0%
! ACCAAAGTATCCCTCCCCAT+CGG + chr4_1:77762961-77762980 None:intergenic 50.0%
GAATCATATGCATGGGCCCA+TGG - chr4_1:77763035-77763054 Msa0574310:CDS 50.0%
! ATAATGGAGGCATGGGTGGT+TGG - chr4_1:77763081-77763100 Msa0574310:intron 50.0%
GTAAACGAGGCTGTTGCCTT+AGG + chr4_1:77763114-77763133 None:intergenic 50.0%
TCGATGAGTAAATTCCCGGC+TGG + chr4_1:77764198-77764217 None:intergenic 50.0%
ATAGGAGATTCACTGGCGAC+AGG - chr4_1:77764571-77764590 Msa0574310:CDS 50.0%
CATGGCTACCACAACACAGT+AGG + chr4_1:77764983-77765002 None:intergenic 50.0%
CTGTGTTGTGGTAGCCATGT+TGG - chr4_1:77764984-77765003 Msa0574310:intron 50.0%
GTCATGCTAACTAGTGCCTG+TGG - chr4_1:77765102-77765121 Msa0574310:intron 50.0%
CATGCTAACTAGTGCCTGTG+GGG - chr4_1:77765104-77765123 Msa0574310:intron 50.0%
GTTTCCTTAACTAGTGCCCC+AGG - chr4_1:77765243-77765262 Msa0574310:intron 50.0%
TTCCTTAACTAGTGCCCCAG+GGG - chr4_1:77765245-77765264 Msa0574310:intron 50.0%
AAATGCTAACCAGTGCCCCT+GGG + chr4_1:77765263-77765282 None:intergenic 50.0%
AGGAAGACGGAGTCGTATCA+GGG - chr4_1:77765657-77765676 Msa0574310:intron 50.0%
AGTTCAGGTGGAAGAAGTCC+TGG - chr4_1:77765738-77765757 Msa0574310:intron 50.0%
GCCAGGGCTTCTCTTATGAT+CGG + chr4_1:77765787-77765806 None:intergenic 50.0%
! CGGCGCCAGTCATTGATTAT+TGG + chr4_1:77765816-77765835 None:intergenic 50.0%
TGGCGCCGTGAAGATAGATT+TGG - chr4_1:77765828-77765847 Msa0574310:intron 50.0%
TCTTGAACGAGCCAAAGACC+TGG - chr4_1:77765914-77765933 Msa0574310:intron 50.0%
CTTGAACGAGCCAAAGACCT+GGG - chr4_1:77765915-77765934 Msa0574310:intron 50.0%
GCTCAAAGAACCCAGGTCTT+TGG + chr4_1:77765928-77765947 None:intergenic 50.0%
GGAGGTTCACTAATTCGCAG+AGG + chr4_1:77766002-77766021 None:intergenic 50.0%
GAACCTCCCAAAGCAAACAG+TGG - chr4_1:77766014-77766033 Msa0574310:CDS 50.0%
! TGTCCACTGTTTGCTTTGGG+AGG + chr4_1:77766020-77766039 None:intergenic 50.0%
TCCCAAAGCAAACAGTGGAC+AGG - chr4_1:77766019-77766038 Msa0574310:CDS 50.0%
GCCTGTCCACTGTTTGCTTT+GGG + chr4_1:77766023-77766042 None:intergenic 50.0%
AGCCTGTCCACTGTTTGCTT+TGG + chr4_1:77766024-77766043 None:intergenic 50.0%
AACAGTGGACAGGCTGCTAA+TGG - chr4_1:77766029-77766048 Msa0574310:CDS 50.0%
ATGGTATCCCACCCACCTAA+TGG - chr4_1:77766222-77766241 Msa0574310:intron 50.0%
AACGGCATCTTCCAGTAGCT+TGG - chr4_1:77766347-77766366 Msa0574310:CDS 50.0%
ACTGGAGCAATAGGTGGTTC+AGG + chr4_1:77766444-77766463 None:intergenic 50.0%
CTCAGGTGCAACATCAAAGG+AGG + chr4_1:77766538-77766557 None:intergenic 50.0%
CTCCTTTGATGTTGCACCTG+AGG - chr4_1:77766536-77766555 Msa0574310:intron 50.0%
!! CAAGTTTCTGGAGTCCAAGG+TGG - chr4_1:77766642-77766661 Msa0574310:intron 50.0%
TCAGCTCTTACTGCTACTGC+CGG - chr4_1:77766763-77766782 Msa0574310:intron 50.0%
GATGTTCACAGTTGGAGCTC+CGG + chr4_1:77766785-77766804 None:intergenic 50.0%
CCGTTGTTCACATCTGCTGT+TGG - chr4_1:77766916-77766935 Msa0574310:intron 50.0%
CAATCTACACCACCAGTAGG+TGG - chr4_1:77766955-77766974 Msa0574310:intron 50.0%
TTCAAAGCTCCACCTACTGG+TGG + chr4_1:77766967-77766986 None:intergenic 50.0%
ATCTTCTGTTCCCGCGATAC+AGG - chr4_1:77767093-77767112 Msa0574310:intron 50.0%
TCTTCTGTTCCCGCGATACA+GGG - chr4_1:77767094-77767113 Msa0574310:intron 50.0%
AAATGTGGCACTAGCGTGCT+TGG + chr4_1:77767124-77767143 None:intergenic 50.0%
! CTCGGCATGGACTGTAACAA+TGG + chr4_1:77767541-77767560 None:intergenic 50.0%
TGGTTGTGGAAAACTCGGCA+TGG + chr4_1:77767554-77767573 None:intergenic 50.0%
GTACTAGTGTGTAGTACGCC+TGG - chr4_1:77767653-77767672 Msa0574310:intron 50.0%
GAAGGGTTTACTGCAGCTGA+AGG + chr4_1:77768236-77768255 None:intergenic 50.0%
! GCATATGATAACGAGGAGGG+TGG + chr4_1:77768290-77768309 None:intergenic 50.0%
!! GGTAATGAGGGAGCTGCTTT+TGG - chr4_1:77768866-77768885 Msa0574310:intron 50.0%
GCAACTGAATGGTAGGTCGT+CGG - chr4_1:77768907-77768926 Msa0574310:intron 50.0%
ACTTTAAACCCCTTCCCTGC+AGG - chr4_1:77768938-77768957 Msa0574310:intron 50.0%
!! CGAATGGATTACCTCCTGCA+GGG + chr4_1:77768955-77768974 None:intergenic 50.0%
CCTGCAGGAGGTAATCCATT+CGG - chr4_1:77768953-77768972 Msa0574310:intron 50.0%
GATGACCGATCTCTCTATGC+TGG + chr4_1:77769095-77769114 None:intergenic 50.0%
ACTGTACGACTCCCATTGAC+AGG + chr4_1:77769185-77769204 None:intergenic 50.0%
CACAGCACAGCACAACAACC+AGG + chr4_1:77761338-77761357 None:intergenic 55.0%
ACCGATGGGGAGGGATACTT+TGG - chr4_1:77762957-77762976 Msa0574310:intron 55.0%
GCAGTCACCCTACTGTGTTG+TGG - chr4_1:77764972-77764991 Msa0574310:CDS 55.0%
AATGCTAACCAGTGCCCCTG+GGG + chr4_1:77765262-77765281 None:intergenic 55.0%
GAAATGCTAACCAGTGCCCC+TGG + chr4_1:77765264-77765283 None:intergenic 55.0%
GCATCTCATACAGGGCGACA+AGG - chr4_1:77765617-77765636 Msa0574310:intron 55.0%
!! CTCCGTCTTCCTGGTGTCAT+AGG + chr4_1:77765649-77765668 None:intergenic 55.0%
CTGATACGACTCCGTCTTCC+TGG + chr4_1:77765658-77765677 None:intergenic 55.0%
CAGGAAGACGGAGTCGTATC+AGG - chr4_1:77765656-77765675 Msa0574310:intron 55.0%
AAGACGGAGTCGTATCAGGG+AGG - chr4_1:77765660-77765679 Msa0574310:intron 55.0%
GCCGATCATAAGAGAAGCCC+TGG - chr4_1:77765783-77765802 Msa0574310:intron 55.0%
TGATTATTGGAGGGCGGCCA+GGG + chr4_1:77765803-77765822 None:intergenic 55.0%
TTGATTATTGGAGGGCGGCC+AGG + chr4_1:77765804-77765823 None:intergenic 55.0%
TCTCTAACAGGCCGGACAAC+AGG + chr4_1:77765957-77765976 None:intergenic 55.0%
!! TGGGACAGCATCGATTCGAG+TGG + chr4_1:77766594-77766613 None:intergenic 55.0%
CTGCAAGACAGTGACCACCT+TGG + chr4_1:77766659-77766678 None:intergenic 55.0%
TGTTTCACCTGCAGGGCCTT+TGG - chr4_1:77766735-77766754 Msa0574310:intron 55.0%
GTAAGAGCTGATCCCGCCAA+AGG + chr4_1:77766754-77766773 None:intergenic 55.0%
CTTCTGTTCCCGCGATACAG+GGG - chr4_1:77767095-77767114 Msa0574310:intron 55.0%
TGAACTGAGACACCCATGCC+AGG + chr4_1:77767404-77767423 None:intergenic 55.0%
GTTGGGGCTTGAACTGGTGT+TGG + chr4_1:77767613-77767632 None:intergenic 55.0%
CTTACGGTTGGGGCTTGAAC+TGG + chr4_1:77767619-77767638 None:intergenic 55.0%
! TAACGAGGAGGGTGGATTCC+AGG + chr4_1:77768282-77768301 None:intergenic 55.0%
TTAAACCCCTTCCCTGCAGG+AGG - chr4_1:77768941-77768960 Msa0574310:intron 55.0%
GATTACCTCCTGCAGGGAAG+GGG + chr4_1:77768949-77768968 None:intergenic 55.0%
GGATTACCTCCTGCAGGGAA+GGG + chr4_1:77768950-77768969 None:intergenic 55.0%
TGGATTACCTCCTGCAGGGA+AGG + chr4_1:77768951-77768970 None:intergenic 55.0%
!! CCGAATGGATTACCTCCTGC+AGG + chr4_1:77768956-77768975 None:intergenic 55.0%
GTTGTGCTGTGCTGTGCTGC+TGG - chr4_1:77761342-77761361 Msa0574310:three_prime_UTR 60.0%
!! GAGGCATGGGTGGTTGGCTT+GGG - chr4_1:77763087-77763106 Msa0574310:intron 60.0%
!! AGGCATGGGTGGTTGGCTTG+GGG - chr4_1:77763088-77763107 Msa0574310:intron 60.0%
TCAAGCGAGGCTTCGCTCCA+TGG - chr4_1:77763326-77763345 Msa0574310:intron 60.0%
! TGCCCCTGGGGCACTAGTTA+AGG + chr4_1:77765250-77765269 None:intergenic 60.0%
!! GTGGTGGGCTCAAAGAACCC+AGG + chr4_1:77765935-77765954 None:intergenic 60.0%
TGAGCCCACCACCTGTTGTC+CGG - chr4_1:77765943-77765962 Msa0574310:intron 60.0%
CTAACAGGCCGGACAACAGG+TGG + chr4_1:77765954-77765973 None:intergenic 60.0%
TTCACCTGCAGGGCCTTTGG+CGG - chr4_1:77766738-77766757 Msa0574310:intron 60.0%
CTTGGATGCCCCTGTATCGC+GGG + chr4_1:77767106-77767125 None:intergenic 60.0%
GCTTGGATGCCCCTGTATCG+CGG + chr4_1:77767107-77767126 None:intergenic 60.0%
TCCAGTCCCAGGCTGGCAAA+TGG - chr4_1:77767370-77767389 Msa0574310:intron 60.0%
CCAGTCCCAGGCTGGCAAAT+GGG - chr4_1:77767371-77767390 Msa0574310:intron 60.0%
GTGCACCCATTTGCCAGCCT+GGG + chr4_1:77767379-77767398 None:intergenic 60.0%
ACTGAGACACCCATGCCAGG+CGG + chr4_1:77767401-77767420 None:intergenic 60.0%
!! GCAGCTGAAGGCGCTACACT+AGG + chr4_1:77768224-77768243 None:intergenic 60.0%
! TGTGCTTGTGGAGGGAGCGT+TGG + chr4_1:77768314-77768333 None:intergenic 60.0%
! GGAGGCATGGGTGGTTGGCT+TGG - chr4_1:77763086-77763105 Msa0574310:intron 65.0%
!! GGTGGTTGGCTTGGGGCCTA+AGG - chr4_1:77763095-77763114 Msa0574310:intron 65.0%
! AACTAGTGCCCCAGGGGCAC+TGG - chr4_1:77765251-77765270 Msa0574310:intron 65.0%
CAGGCCGGACAACAGGTGGT+GGG + chr4_1:77765950-77765969 None:intergenic 65.0%
ACAGGCCGGACAACAGGTGG+TGG + chr4_1:77765951-77765970 None:intergenic 65.0%
TCACCTGCAGGGCCTTTGGC+GGG - chr4_1:77766739-77766758 Msa0574310:intron 65.0%
TCCTTCCCTGCTCCAGTCCC+AGG - chr4_1:77767359-77767378 Msa0574310:intron 65.0%
CCCATTTGCCAGCCTGGGAC+TGG + chr4_1:77767374-77767393 None:intergenic 65.0%
GGTGCACCCATTTGCCAGCC+TGG + chr4_1:77767380-77767399 None:intergenic 65.0%
TGGCAAATGGGTGCACCGCC+TGG - chr4_1:77767383-77767402 Msa0574310:intron 65.0%
AATGGGTGCACCGCCTGGCA+TGG - chr4_1:77767388-77767407 Msa0574310:intron 65.0%
ATGGGTGCACCGCCTGGCAT+GGG - chr4_1:77767389-77767408 Msa0574310:intron 65.0%
GATCCCGCCAAAGGCCCTGC+AGG + chr4_1:77766745-77766764 None:intergenic 70.0%
GCCTGGGACTGGAGCAGGGA+AGG + chr4_1:77767363-77767382 None:intergenic 70.0%
TCCCTGCTCCAGTCCCAGGC+TGG - chr4_1:77767363-77767382 Msa0574310:intron 70.0%
GCCAGCCTGGGACTGGAGCA+GGG + chr4_1:77767367-77767386 None:intergenic 70.0%
TGCCAGCCTGGGACTGGAGC+AGG + chr4_1:77767368-77767387 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 77761132 77769494 77761132 ID=Msa0574310;Name=Msa0574310
chr4_1 mRNA 77761132 77769494 77761132 ID=Msa0574310-mRNA-1;Parent=Msa0574310;Name=Msa0574310-mRNA-1;_AED=0.07;_eAED=0.07;_QI=435|1|1|1|0.78|0.8|15|515|688
chr4_1 exon 77761132 77761782 77761132 ID=Msa0574310-mRNA-1:exon:27466;Parent=Msa0574310-mRNA-1
chr4_1 exon 77762133 77762178 77762133 ID=Msa0574310-mRNA-1:exon:27465;Parent=Msa0574310-mRNA-1
chr4_1 exon 77762267 77762438 77762267 ID=Msa0574310-mRNA-1:exon:27464;Parent=Msa0574310-mRNA-1
chr4_1 exon 77762993 77763076 77762993 ID=Msa0574310-mRNA-1:exon:27463;Parent=Msa0574310-mRNA-1
chr4_1 exon 77763187 77763291 77763187 ID=Msa0574310-mRNA-1:exon:27462;Parent=Msa0574310-mRNA-1
chr4_1 exon 77763392 77763511 77763392 ID=Msa0574310-mRNA-1:exon:27461;Parent=Msa0574310-mRNA-1
chr4_1 exon 77763633 77763877 77763633 ID=Msa0574310-mRNA-1:exon:27460;Parent=Msa0574310-mRNA-1
chr4_1 exon 77763966 77764281 77763966 ID=Msa0574310-mRNA-1:exon:27459;Parent=Msa0574310-mRNA-1
chr4_1 exon 77764559 77764996 77764559 ID=Msa0574310-mRNA-1:exon:27458;Parent=Msa0574310-mRNA-1
chr4_1 exon 77766006 77766099 77766006 ID=Msa0574310-mRNA-1:exon:27457;Parent=Msa0574310-mRNA-1
chr4_1 exon 77766176 77766237 77766176 ID=Msa0574310-mRNA-1:exon:27456;Parent=Msa0574310-mRNA-1
chr4_1 exon 77766340 77766427 77766340 ID=Msa0574310-mRNA-1:exon:27455;Parent=Msa0574310-mRNA-1
chr4_1 exon 77766794 77766855 77766794 ID=Msa0574310-mRNA-1:exon:27454;Parent=Msa0574310-mRNA-1
chr4_1 exon 77768336 77768442 77768336 ID=Msa0574310-mRNA-1:exon:27453;Parent=Msa0574310-mRNA-1
chr4_1 exon 77769068 77769494 77769068 ID=Msa0574310-mRNA-1:exon:27452;Parent=Msa0574310-mRNA-1
chr4_1 five_prime_UTR 77769068 77769494 77769068 ID=Msa0574310-mRNA-1:five_prime_utr;Parent=Msa0574310-mRNA-1
chr4_1 five_prime_UTR 77768435 77768442 77768435 ID=Msa0574310-mRNA-1:five_prime_utr;Parent=Msa0574310-mRNA-1
chr4_1 CDS 77768336 77768434 77768336 ID=Msa0574310-mRNA-1:cds;Parent=Msa0574310-mRNA-1
chr4_1 CDS 77766794 77766855 77766794 ID=Msa0574310-mRNA-1:cds;Parent=Msa0574310-mRNA-1
chr4_1 CDS 77766340 77766427 77766340 ID=Msa0574310-mRNA-1:cds;Parent=Msa0574310-mRNA-1
chr4_1 CDS 77766176 77766237 77766176 ID=Msa0574310-mRNA-1:cds;Parent=Msa0574310-mRNA-1
chr4_1 CDS 77766006 77766099 77766006 ID=Msa0574310-mRNA-1:cds;Parent=Msa0574310-mRNA-1
chr4_1 CDS 77764559 77764996 77764559 ID=Msa0574310-mRNA-1:cds;Parent=Msa0574310-mRNA-1
chr4_1 CDS 77763966 77764281 77763966 ID=Msa0574310-mRNA-1:cds;Parent=Msa0574310-mRNA-1
chr4_1 CDS 77763633 77763877 77763633 ID=Msa0574310-mRNA-1:cds;Parent=Msa0574310-mRNA-1
chr4_1 CDS 77763392 77763511 77763392 ID=Msa0574310-mRNA-1:cds;Parent=Msa0574310-mRNA-1
chr4_1 CDS 77763187 77763291 77763187 ID=Msa0574310-mRNA-1:cds;Parent=Msa0574310-mRNA-1
chr4_1 CDS 77762993 77763076 77762993 ID=Msa0574310-mRNA-1:cds;Parent=Msa0574310-mRNA-1
chr4_1 CDS 77762267 77762438 77762267 ID=Msa0574310-mRNA-1:cds;Parent=Msa0574310-mRNA-1
chr4_1 CDS 77762133 77762178 77762133 ID=Msa0574310-mRNA-1:cds;Parent=Msa0574310-mRNA-1
chr4_1 CDS 77761647 77761782 77761647 ID=Msa0574310-mRNA-1:cds;Parent=Msa0574310-mRNA-1
chr4_1 three_prime_UTR 77761132 77761646 77761132 ID=Msa0574310-mRNA-1:three_prime_utr;Parent=Msa0574310-mRNA-1
Gene Sequence

>Msa0574310

ATGACAAGTAGACTAAAGGAAGATCAGAAAAATGAACGAACTATTCGAGGTCTTCTCAAACTTACACCGAATCGAAGATGCATTAACTGCAACAGCATGGGACCACAATATGTATGCACAAATTTCTGGACGTTTGTTTGCACAAACTGCAGTGGAATACACCGGGAATTTACTCATCGAGTAAAATCAATCTCCATGGCTAAATTTACTGCACAAGAAGTTAGTGCACTTCAAGAAGGAGGAAATCAGCGTGCAAAAGAAATATTTTTCAAAGAATGGGATGCGCAAACTCATTCTTTACCTGATAGCGGTAATGTTGACAGGATTCGGGATTTTATCAAGCGTGTTTATGTGGATAGGAGATTCACTGGCGACAGGTCCTATGACAAACCTCCAAGAGTAAAGGGCGACAAGGATGATTCCTATGACACCAGGAAGACGGAGTCGTATCAGGGAGGACCAAAAAGCCTTCCTTATGAGGATACATATGAACACCGTTTCAGTGATAGGTCTAGTTCAGGTGGAAGAAGTCCTGGATATGATCAAGAAAGACATTATGCCGATCATAAGAGAAGCCCTGGCCGCCCTCCAATAATCAATGACTGGCGCCGTGAAGATAGATTTGGAGATGGACGGAAATTCGAAGATAATCGTATAACTGATGGAGGTATTAAGATGGAAAGCCAATCTCTTGAACGAGCCAAAGACCTGGGTTCTTTGAGCCCACCACCTGTTGTCCGGCCTGTTAGAGAAATTTTGGGAGAAAATGTAGTACCTCTGCGAATTAGTGAACCTCCCAAAGCAAACAGTGGACAGGCTGCTAATGGCTCAACACTCACACAGAGAACGGCATCTTCCAGTAGCTTGGCATCCAGTAATGGAACCTCATCAGAAGTTAAGCTTGAGACTATCAGGAGCCTTATTGATTTTGATGATGTTCCTGAACCACCTATTGCTCCAGTAATTCCTCAAGCCACACAAACTACTGTGGCTCAAATTGTGAACCCAACAAATTCTGGTGATAACAATTGGGCCTCCTTTGATGTTGCACCTGAGGTAAAAGTATCTCAGGGCCTTTCAAATGTAAATCCACTCGAATCGATGCTGTCCCAGTTGTCAGTTCCATCATCTTTACCTGATCAAGTTTCTGGAGTCCAAGGGCCTTTGGCGGGATCAGCTCTTACTGCTACTGCCGGAGCTCCAACTGTGAACATCTTCGCAACATTCCCATCCAGTGTTGCTTCATTAGCATCTTCTGGATTGACAATGGAATCGCCTTTCAATAATGCACTCCCATGGCCTAATTTGCAGTATCAGCAGCAACAACCGTTGTTCACATCTGCTGTTGGTCAGCCTACTATTCAACAATCTACACCACCAGTAGGTGGAGCTTTGAATAACCAGGGGCATCCAAGCACGCTAGTGCCACATTTCTCAAAGGTTGTCAATGGGGAAAAATCTAATTTTGCGCCACAAACTTCTACTGTAGACACAAAACCAAGTGGAAGAAATGAACTTCCTGAGGATCTATTCACTATAAAATATTCATCCTTCCCTGCTCCAGTCCCAGGCTGGCAAATGGGTGCACCGCCTGGCATGGGTGTCTCAGTTCAATATAATAATGTGATGTCCATGCCGAGTTTTCCACAACCATCACAATCTACAAATCCATTTGATGTGATCAACGAACCAACACCAGTTCAAGCCCCAACCTTTCCTTCTATGTCATCTTTGCAAGGTGCTCTGCCTAGTGTAGCGCCTTCAGCTGCAGTAAACCCTTCAAACATGGGTAATCAATCTCTTTCCTGGAATCCACCCTCCTCGTTATCATATGCACCAACGCTCCCTCCACAAGCACATATTCATGCCTCAGCAATGGGACCAAGGGCGTACATGGAGCAACAACTTCTCACTAATGTGCCAATGCCAAGGCATCAAGGAATTGGGACTTTTGGTAATGAGGGAGCTGCTTTTGGCTTCTCTAATATAGATCAGCAACTGAATGGTAGGTCGTCGGCCTCTGCTACTTTAAACCCCTTCCCTGCAGGAGGTAATCCATTCGGATGA
Protein sequence

>Msa0574310

MTSRLKEDQKNERTIRGLLKLTPNRRCINCNSMGPQYVCTNFWTFVCTNCSGIHREFTHRVKSISMAKFTAQEVSALQEGGNQRAKEIFFKEWDAQTHSLPDSGNVDRIRDFIKRVYVDRRFTGDRSYDKPPRVKGDKDDSYDTRKTESYQGGPKSLPYEDTYEHRFSDRSSSGGRSPGYDQERHYADHKRSPGRPPIINDWRREDRFGDGRKFEDNRITDGGIKMESQSLERAKDLGSLSPPPVVRPVREILGENVVPLRISEPPKANSGQAANGSTLTQRTASSSSLASSNGTSSEVKLETIRSLIDFDDVPEPPIAPVIPQATQTTVAQIVNPTNSGDNNWASFDVAPEVKVSQGLSNVNPLESMLSQLSVPSSLPDQVSGVQGPLAGSALTATAGAPTVNIFATFPSSVASLASSGLTMESPFNNALPWPNLQYQQQQPLFTSAVGQPTIQQSTPPVGGALNNQGHPSTLVPHFSKVVNGEKSNFAPQTSTVDTKPSGRNELPEDLFTIKYSSFPAPVPGWQMGAPPGMGVSVQYNNVMSMPSFPQPSQSTNPFDVINEPTPVQAPTFPSMSSLQGALPSVAPSAAVNPSNMGNQSLSWNPPSSLSYAPTLPPQAHIHASAMGPRAYMEQQLLTNVPMPRHQGIGTFGNEGAAFGFSNIDQQLNGRSSASATLNPFPAGGNPFG*