AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1396770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1396770 MtrunA17_Chr1g0190731 97.479 357 6 2 1 356 1 355 0.0 705
Msa1396770 MtrunA17_Chr1g0184841 79.775 178 36 0 175 352 101 278 2.49e-89 270
Msa1396770 MtrunA17_Chr4g0074161 64.130 184 52 4 167 336 173 356 1.40e-61 202
Msa1396770 MtrunA17_Chr7g0234761 64.000 75 26 1 185 258 308 382 2.16e-22 98.2
Msa1396770 MtrunA17_Chr8g0339091 64.000 75 26 1 185 258 282 356 4.72e-22 97.1
Msa1396770 MtrunA17_Chr3g0131771 48.544 103 52 1 183 284 136 238 5.88e-22 95.1
Msa1396770 MtrunA17_Chr3g0144641 69.697 66 19 1 194 258 191 256 2.12e-21 94.4
Msa1396770 MtrunA17_Chr1g0152131 68.182 66 20 1 194 258 260 325 4.29e-21 94.0
Msa1396770 MtrunA17_Chr4g0035101 68.182 66 20 1 194 258 143 208 1.44e-20 91.3
Msa1396770 MtrunA17_Chr8g0365941 68.182 66 20 1 194 258 305 370 2.05e-20 92.0
Msa1396770 MtrunA17_Chr5g0421111 68.182 66 20 1 194 258 365 430 3.49e-20 91.7
Msa1396770 MtrunA17_Chr8g0363921 65.152 66 22 1 194 258 151 216 4.28e-20 89.0
Msa1396770 MtrunA17_Chr5g0415291 60.000 75 29 1 185 258 103 177 5.49e-20 87.8
Msa1396770 MtrunA17_Chr8g0385911 65.152 66 22 1 194 258 145 210 1.74e-19 88.2
Msa1396770 MtrunA17_Chr1g0182791 51.316 76 33 1 196 271 319 390 8.03e-18 84.7
Msa1396770 MtrunA17_Chr1g0174271 50.549 91 39 3 176 260 275 365 9.07e-18 83.6
Msa1396770 MtrunA17_Chr4g0014771 59.091 66 26 1 193 257 117 182 2.56e-17 79.3
Msa1396770 MtrunA17_Chr1g0174161 39.200 125 68 4 194 312 160 282 3.91e-17 81.3
Msa1396770 MtrunA17_Chr1g0193321 52.857 70 29 1 196 265 464 529 4.74e-17 82.4
Msa1396770 MtrunA17_Chr5g0393721 58.462 65 27 0 193 257 223 287 5.41e-17 80.9
Msa1396770 MtrunA17_Chr6g0484271 41.593 113 52 4 194 300 155 259 5.44e-17 80.1
Msa1396770 MtrunA17_Chr1g0153241 46.835 79 36 1 178 256 75 147 1.07e-16 79.0
Msa1396770 MtrunA17_Chr1g0152651 56.923 65 28 0 193 257 273 337 1.08e-16 80.5
Msa1396770 MtrunA17_Chr3g0134741 48.684 76 39 0 193 268 228 303 1.43e-16 79.7
Msa1396770 MtrunA17_Chr7g0262691 50.000 70 35 0 197 266 255 324 2.01e-16 80.1
Msa1396770 MtrunA17_Chr7g0258161 60.606 66 25 1 194 258 173 238 2.90e-16 79.0
Msa1396770 MtrunA17_Chr7g0258181 50.667 75 36 1 187 260 236 310 5.15e-16 77.8
Msa1396770 MtrunA17_Chr3g0095391 53.968 63 29 0 196 258 311 373 6.36e-16 78.6
Msa1396770 MtrunA17_Chr8g0351881 52.174 69 32 1 193 260 315 383 3.10e-15 76.3
Msa1396770 MtrunA17_Chr4g0032951 53.623 69 31 1 193 260 354 422 4.77e-15 75.9
Msa1396770 MtrunA17_Chr1g0207311 45.783 83 45 0 186 268 188 270 6.58e-15 74.3
Msa1396770 MtrunA17_Chr7g0270871 51.786 56 27 0 205 260 213 268 6.99e-15 75.1
Msa1396770 MtrunA17_Chr5g0402031 59.259 54 22 0 205 258 116 169 8.75e-15 74.7
Msa1396770 MtrunA17_Chr2g0329041 54.688 64 28 1 193 255 331 394 8.77e-15 75.1
Msa1396770 MtrunA17_Chr5g0435021 57.895 57 24 0 201 257 225 281 9.26e-15 74.3
Msa1396770 MtrunA17_Chr3g0134001 46.250 80 42 1 187 266 164 242 9.75e-15 73.6
Msa1396770 MtrunA17_Chr1g0207301 48.529 68 35 0 190 257 284 351 1.70e-14 73.9
Msa1396770 MtrunA17_Chr3g0087771 47.727 88 38 3 178 257 299 386 5.40e-14 72.8
Msa1396770 MtrunA17_Chr7g0271251 51.429 70 31 1 196 265 434 500 5.73e-14 73.2
Msa1396770 MtrunA17_Chr8g0384141 50.000 70 35 0 187 256 107 176 6.78e-14 70.9
Msa1396770 MtrunA17_Chr7g0231461 49.206 63 32 0 194 256 297 359 6.98e-13 69.7
Msa1396770 MtrunA17_Chr1g0185741 32.540 126 73 1 200 325 190 303 3.31e-12 66.6
Msa1396770 MtrunA17_Chr1g0213791 50.769 65 31 1 193 256 264 328 8.21e-12 65.9
Msa1396770 MtrunA17_Chr7g0243041 49.057 53 27 0 201 253 33 85 4.27e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1396770 AT4G02590.3 76.374 182 38 3 174 353 66 244 7.05e-80 244
Msa1396770 AT4G02590.2 76.374 182 38 3 174 353 129 307 2.70e-79 245
Msa1396770 AT4G02590.1 76.374 182 38 3 174 353 129 307 2.70e-79 245
Msa1396770 AT1G03040.1 47.684 367 82 12 11 353 19 299 1.69e-75 235
Msa1396770 AT1G03040.2 73.481 181 37 4 178 353 120 294 1.18e-73 230
Msa1396770 AT1G03040.3 44.388 392 89 11 11 353 19 330 1.38e-71 226
Msa1396770 AT2G24260.2 67.974 153 44 2 187 336 28 178 1.17e-61 198
Msa1396770 AT4G30980.1 60.947 169 56 2 168 336 104 262 5.15e-60 196
Msa1396770 AT2G24260.1 67.974 153 44 2 187 336 131 281 9.91e-60 196
Msa1396770 AT4G30980.2 60.947 169 56 2 168 336 152 310 1.16e-59 196
Msa1396770 AT5G58010.1 64.286 154 47 1 191 336 96 249 1.16e-58 192
Msa1396770 AT5G48560.1 51.376 109 48 2 177 284 284 388 2.84e-23 101
Msa1396770 AT5G48560.2 51.376 109 48 2 177 284 284 388 3.31e-23 100
Msa1396770 AT5G50915.3 50.980 102 39 2 186 286 128 219 1.52e-22 95.9
Msa1396770 AT5G50915.4 50.980 102 39 2 186 286 128 219 1.52e-22 95.9
Msa1396770 AT5G50915.1 50.980 102 39 2 186 286 128 219 1.85e-22 95.9
Msa1396770 AT5G50915.2 50.980 102 39 2 186 286 128 219 1.85e-22 95.9
Msa1396770 AT4G34530.1 68.182 66 20 1 194 258 172 237 5.81e-21 92.8
Msa1396770 AT3G07340.2 69.697 66 19 1 194 258 258 323 6.99e-21 93.6
Msa1396770 AT3G07340.1 69.697 66 19 1 194 258 258 323 7.51e-21 93.6
Msa1396770 AT1G68920.3 68.182 66 20 1 194 258 302 367 1.19e-20 93.2
Msa1396770 AT1G68920.1 68.182 66 20 1 194 258 303 368 1.29e-20 93.2
Msa1396770 AT1G68920.4 68.182 66 20 1 194 258 303 368 1.29e-20 93.2
Msa1396770 AT1G68920.2 68.182 66 20 1 194 258 303 368 1.29e-20 93.2
Msa1396770 AT3G23690.1 61.333 75 28 1 185 258 182 256 1.83e-20 91.7
Msa1396770 AT1G10120.2 66.667 66 21 1 194 258 206 271 4.71e-20 90.5
Msa1396770 AT1G10120.1 66.667 66 21 1 194 258 206 271 4.71e-20 90.5
Msa1396770 AT5G62610.2 57.333 75 31 1 185 258 144 218 6.84e-20 89.0
Msa1396770 AT5G62610.1 57.333 75 31 1 185 258 144 218 6.84e-20 89.0
Msa1396770 AT2G18300.1 65.152 66 22 1 194 258 185 250 9.53e-20 89.4
Msa1396770 AT2G18300.2 65.152 66 22 1 194 258 185 250 9.66e-20 89.4
Msa1396770 AT1G26260.3 63.636 66 23 1 194 258 172 237 1.08e-19 89.4
Msa1396770 AT1G26260.5 63.636 66 23 1 194 258 201 266 1.16e-19 89.7
Msa1396770 AT4G36540.1 52.273 88 39 2 172 258 121 206 1.23e-19 88.6
Msa1396770 AT4G36540.2 52.273 88 39 2 172 258 121 206 1.26e-19 88.6
Msa1396770 AT1G59640.1 65.152 66 22 1 194 258 136 201 1.29e-19 87.8
Msa1396770 AT1G25330.1 42.308 130 60 4 186 314 96 211 1.30e-19 86.7
Msa1396770 AT2G18300.3 65.152 66 22 1 194 258 185 250 1.36e-19 89.4
Msa1396770 AT1G26260.4 63.636 66 23 1 194 258 223 288 1.42e-19 89.4
Msa1396770 AT1G26260.1 63.636 66 23 1 194 258 223 288 1.42e-19 89.4
Msa1396770 AT1G26260.6 63.636 66 23 1 194 258 223 288 1.42e-19 89.4
Msa1396770 AT1G26260.2 63.636 66 23 1 194 258 223 288 1.42e-19 89.4
Msa1396770 AT2G42300.1 44.737 114 58 3 194 303 185 297 3.58e-19 87.4
Msa1396770 AT1G59640.2 65.152 66 22 1 194 258 136 201 4.45e-19 87.4
Msa1396770 AT1G73830.2 52.809 89 38 3 194 281 147 232 1.11e-18 85.1
Msa1396770 AT1G73830.1 52.809 89 38 3 194 281 147 232 1.12e-18 85.1
Msa1396770 AT3G57800.2 47.619 105 49 3 194 293 204 307 6.50e-18 84.3
Msa1396770 AT1G27740.1 45.833 96 46 1 173 268 152 241 1.27e-17 82.0
Msa1396770 AT2G20180.7 56.452 62 27 0 197 258 210 271 1.98e-17 83.2
Msa1396770 AT2G20180.1 56.452 62 27 0 197 258 210 271 1.98e-17 83.2
Msa1396770 AT2G20180.5 56.452 62 27 0 197 258 210 271 1.98e-17 83.2
Msa1396770 AT4G33880.1 48.837 86 44 0 193 278 265 350 2.51e-17 82.4
Msa1396770 AT2G20180.4 55.556 63 28 0 196 258 280 342 2.99e-17 83.2
Msa1396770 AT2G20180.6 55.556 63 28 0 196 258 280 342 2.99e-17 83.2
Msa1396770 AT2G20180.2 55.556 63 28 0 196 258 280 342 2.99e-17 83.2
Msa1396770 AT2G20180.3 55.556 63 28 0 196 258 280 342 2.99e-17 83.2
Msa1396770 AT1G18400.2 55.405 74 31 2 194 266 145 217 3.53e-17 80.5
Msa1396770 AT2G14760.1 50.000 82 41 0 193 274 236 317 4.50e-17 81.6
Msa1396770 AT1G18400.1 54.667 75 32 2 194 267 145 218 8.12e-17 79.7
Msa1396770 AT1G09530.3 51.562 64 31 0 196 259 339 402 8.21e-17 82.0
Msa1396770 AT1G09530.2 51.562 64 31 0 196 259 339 402 8.21e-17 82.0
Msa1396770 AT1G09530.5 51.562 64 31 0 196 259 339 402 8.21e-17 82.0
Msa1396770 AT1G09530.1 51.562 64 31 0 196 259 339 402 8.21e-17 82.0
Msa1396770 AT1G09530.4 51.562 64 31 0 196 259 339 402 8.21e-17 82.0
Msa1396770 AT1G09530.6 51.562 64 31 0 196 259 339 402 8.21e-17 82.0
Msa1396770 AT2G42300.4 62.121 66 24 1 194 258 185 250 1.12e-16 79.7
Msa1396770 AT2G42280.1 56.522 69 29 1 193 260 278 346 1.60e-16 80.1
Msa1396770 AT2G20180.8 56.667 60 26 0 196 255 280 339 2.53e-16 79.3
Msa1396770 AT5G43175.1 46.250 80 43 0 189 268 127 206 3.49e-16 77.0
Msa1396770 AT4G09180.1 57.576 66 27 1 193 257 183 248 4.40e-16 77.8
Msa1396770 AT1G35460.1 57.576 66 27 1 193 257 180 245 8.46e-16 76.6
Msa1396770 AT2G42280.3 59.375 64 25 1 193 255 278 341 1.19e-15 77.8
Msa1396770 AT1G51140.1 55.072 69 30 1 193 260 303 371 8.36e-15 75.5
Msa1396770 AT2G14760.3 46.067 89 35 1 193 268 236 324 8.92e-15 75.1
Msa1396770 AT4G36930.1 55.932 59 26 0 200 258 197 255 1.29e-14 74.7
Msa1396770 AT5G67110.1 42.529 87 48 1 189 275 82 166 1.89e-14 72.0
Msa1396770 AT4G00050.2 47.826 69 36 0 189 257 100 168 4.56e-14 72.4
Msa1396770 AT1G66470.1 53.226 62 29 0 203 264 204 265 7.11e-14 71.6
Msa1396770 AT5G37800.1 46.667 75 37 1 190 264 200 271 8.26e-14 71.6
Msa1396770 AT4G00050.1 47.826 69 36 0 189 257 202 270 1.00e-13 72.4
Msa1396770 AT4G28815.2 49.123 57 29 0 197 253 71 127 1.08e-13 70.1
Msa1396770 AT4G00050.3 47.826 69 36 0 189 257 202 270 1.15e-13 72.0
Msa1396770 AT3G21330.1 57.143 56 24 0 201 256 276 331 1.48e-13 71.6
Msa1396770 AT4G28790.1 45.588 68 37 0 191 258 268 335 2.38e-13 71.2
Msa1396770 AT4G28815.1 49.123 57 29 0 197 253 147 203 3.70e-13 69.7
Msa1396770 AT2G43010.2 58.333 60 25 0 197 256 254 313 9.59e-13 69.3
Msa1396770 AT2G43010.1 58.333 60 25 0 197 256 254 313 9.73e-13 69.3
Msa1396770 AT2G43010.3 58.333 60 25 0 197 256 261 320 1.06e-12 69.3
Msa1396770 AT2G43010.4 58.333 60 25 0 197 256 254 313 1.27e-12 68.9
Msa1396770 AT3G59060.3 53.968 63 29 0 196 258 252 314 1.28e-12 68.9
Msa1396770 AT3G59060.2 53.968 63 29 0 196 258 252 314 1.28e-12 68.9
Msa1396770 AT3G59060.4 53.968 63 29 0 196 258 252 314 1.28e-12 68.9
Msa1396770 AT3G59060.1 53.968 63 29 0 196 258 252 314 1.33e-12 68.9
Msa1396770 AT2G43010.5 58.333 60 25 0 197 256 296 355 1.42e-12 68.9
Msa1396770 AT5G01305.1 47.692 65 34 0 189 253 32 96 1.46e-12 65.9
Msa1396770 AT4G28800.1 40.000 80 43 1 197 271 252 331 1.97e-12 68.6
Msa1396770 AT2G43140.2 55.385 65 28 1 193 256 230 294 2.55e-12 67.4
Msa1396770 AT2G43140.1 55.385 65 28 1 193 256 133 197 2.62e-12 65.9
Msa1396770 AT4G28800.2 41.333 75 43 1 197 271 264 337 4.59e-12 67.4
Msa1396770 AT4G28790.2 45.312 64 35 0 191 254 268 331 4.70e-12 66.6
Msa1396770 AT2G46970.2 42.857 63 36 0 196 258 194 256 7.41e-12 66.6
Msa1396770 AT2G46970.3 42.857 63 36 0 196 258 203 265 7.93e-12 66.2
Msa1396770 AT2G46970.1 42.857 63 36 0 196 258 225 287 8.11e-12 66.6
Msa1396770 AT4G00120.1 46.429 56 30 0 201 256 119 174 9.60e-11 61.2

Find 132 sgRNAs with CRISPR-Local

Find 342 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAAATGGAATAGAATTTA+TGG 0.168347 tig0022086:-835 None:intergenic
CTTAATTAGAAGATTGATTA+TGG 0.191327 tig0022086:-775 None:intergenic
ATGATGATTGTTGTTATTAT+TGG 0.222076 tig0022086:-1290 None:intergenic
ACCACTTCGCCCAGGCTTGC+TGG 0.236946 tig0022086:-5668 None:intergenic
AATGCCTTTAGGGTTGAATT+TGG 0.237625 tig0022086:+1183 Msa1396770:CDS
TTTGTAATGTATCATGTATT+TGG 0.238037 tig0022086:+6398 Msa1396770:three_prime_UTR
TATGTGTGGTTGTTTGATTC+AGG 0.263977 tig0022086:-5849 None:intergenic
CCAACCCCACCATAGATATT+TGG 0.289359 tig0022086:-6268 None:intergenic
TTGATGGTGAAGGTGAAGTT+GGG 0.297221 tig0022086:-2390 None:intergenic
GAGGAGGAATAATGCCTTTA+GGG 0.312263 tig0022086:+1173 Msa1396770:CDS
GGAGGAGGAATAATGCCTTT+AGG 0.319681 tig0022086:+1172 Msa1396770:CDS
TATGGAGGAGTGTTGCAATT+AGG 0.325929 tig0022086:+1109 Msa1396770:CDS
AAATGCTGCAGTATTGAAAA+AGG 0.327368 tig0022086:+950 Msa1396770:five_prime_UTR
TCACCATGACAATGACATAC+TGG 0.333416 tig0022086:-6205 None:intergenic
TTGAGAGGAGGTGGAGGAGG+AGG 0.338901 tig0022086:+1154 Msa1396770:CDS
GGAAAGTGGGGACATTTAAA+AGG 0.339902 tig0022086:+6363 Msa1396770:three_prime_UTR
GCAGTAACAGACGCTGGATT+TGG 0.346934 tig0022086:-4656 None:intergenic
AGAGGAGGTGGAGGAGGAGG+AGG 0.354597 tig0022086:+1157 Msa1396770:CDS
CAGACGCTGGATTTGGTTGC+TGG 0.356776 tig0022086:-4649 None:intergenic
CCTGAAAACGGAGTTGGATA+TGG 0.360212 tig0022086:+1091 Msa1396770:CDS
ACAACAAGTGGCTAAACTTA+TGG 0.361454 tig0022086:+5707 Msa1396770:CDS
TCTTTGAGAGGAGGTGGAGG+AGG 0.361753 tig0022086:+1151 Msa1396770:CDS
GAAGGTGAAGTTGGGGTTGA+GGG 0.362623 tig0022086:-2382 None:intergenic
TTCTTCACCTTCTTCTACTC+CGG 0.363218 tig0022086:+1366 Msa1396770:CDS
ATTGCTGATGCTAGAGATAT+AGG 0.364284 tig0022086:-5786 None:intergenic
GTGGAACCAACCAGCAAGCC+TGG 0.378933 tig0022086:+5658 Msa1396770:CDS
GTTCCTTAGGCTCCAAGTTA+AGG 0.387394 tig0022086:+5081 Msa1396770:CDS
GGTAATTGTTCAGAAGGATT+AGG 0.387856 tig0022086:+1037 Msa1396770:CDS
GTTGATGGTGAAGGTGAAGT+TGG 0.390042 tig0022086:-2391 None:intergenic
TTGATTATGTGAAGTTCCTT+AGG 0.396018 tig0022086:+5068 Msa1396770:CDS
ACCACCAACCTTGTTGATGC+TGG 0.396309 tig0022086:-4896 None:intergenic
TGAAGGTGAAGTTGGGGTTG+AGG 0.397507 tig0022086:-2383 None:intergenic
GGTTCTTTGAGAGGAGGTGG+AGG 0.400561 tig0022086:+1148 Msa1396770:CDS
AAGGTGAAGTTGGGGTTGAG+GGG 0.404256 tig0022086:-2381 None:intergenic
TGAAAGAATGAAAGCATTGC+AGG 0.405094 tig0022086:+4864 Msa1396770:CDS
TGCTCCAAATTCAACCCTAA+AGG 0.411905 tig0022086:-1187 None:intergenic
AATATCTATGGTGGGGTTGG+TGG 0.417180 tig0022086:+6271 Msa1396770:three_prime_UTR
GAAACCCTAGGACCTGAAAA+TGG 0.417764 tig0022086:-849 None:intergenic
TGGATATATATGTCAGAATC+AGG 0.421437 tig0022086:-6092 None:intergenic
ATGATACCTGTTGGTGTTGA+TGG 0.423246 tig0022086:-2406 None:intergenic
TATCACCTCCACTGCAGAAA+CGG 0.427521 tig0022086:-5461 None:intergenic
GAAAATGGAATAGAATTTAT+GGG 0.428704 tig0022086:-834 None:intergenic
AAAATCATCATGGGTTTCTC+AGG 0.434914 tig0022086:+1209 Msa1396770:CDS
GTGAGTGAGAAGTGTGAGAA+TGG 0.443758 tig0022086:-729 None:intergenic
CTTCGCCCAGGCTTGCTGGT+TGG 0.445620 tig0022086:-5664 None:intergenic
ATCACCTCCACTGCAGAAAC+GGG 0.449434 tig0022086:-5460 None:intergenic
GGTGGTTCTTTGAGAGGAGG+TGG 0.450799 tig0022086:+1145 Msa1396770:CDS
TTCCTCCAAATATCTATGGT+GGG 0.458473 tig0022086:+6263 Msa1396770:three_prime_UTR
GGACGGATGCCAGGTGGTTG+TGG 0.459379 tig0022086:-4683 None:intergenic
CCAAATATCTATGGTGGGGT+TGG 0.459732 tig0022086:+6268 Msa1396770:three_prime_UTR
TCTTTACACATACCTTAACT+TGG 0.464563 tig0022086:-5093 None:intergenic
TCCTCCAAATATCTATGGTG+GGG 0.472491 tig0022086:+6264 Msa1396770:three_prime_UTR
CTGATAATAAGTGAAATTAG+AGG 0.473396 tig0022086:+6179 Msa1396770:three_prime_UTR
CCTTCACCATCAACACCAAC+AGG 0.479448 tig0022086:+2400 Msa1396770:CDS
AGGCATTATGCAAAGTGCCT+TGG 0.488843 tig0022086:-5766 None:intergenic
GATAACGTTGTTGATGTTGA+AGG 0.491085 tig0022086:+1259 Msa1396770:CDS
AGGTGAAGTTGGGGTTGAGG+GGG 0.491473 tig0022086:-2380 None:intergenic
ATGAGTAGACTTGGTGGAGC+TGG 0.497941 tig0022086:+5409 Msa1396770:CDS
TACCCGCTCAGCAATGCTGT+GGG 0.498183 tig0022086:-4741 None:intergenic
CGCACTCGAGGACGGATGCC+AGG 0.498354 tig0022086:-4692 None:intergenic
GATTGGAGCATGGGGCGTAC+AGG 0.498420 tig0022086:-2353 None:intergenic
TGAAAACATACAGTGATTCC+CGG 0.501076 tig0022086:-1385 None:intergenic
ATCTTAGCAGTGCCTGAAAA+CGG 0.505001 tig0022086:+1079 Msa1396770:CDS
AATTTGGAGCAAAATCATCA+TGG 0.505233 tig0022086:+1199 Msa1396770:CDS
ATACCTTAACTTGGAGCCTA+AGG 0.506615 tig0022086:-5084 None:intergenic
CACCATGACAATGACATACT+GGG 0.516631 tig0022086:-6204 None:intergenic
CAATTAGGTTCCACACCTCA+TGG 0.518384 tig0022086:+1124 Msa1396770:CDS
ATCGTTCGACCACTTCGCCC+AGG 0.518825 tig0022086:-5676 None:intergenic
TTCTTGCTCGCACTCGAGGA+CGG 0.520681 tig0022086:-4700 None:intergenic
TTTCCTCCAAATATCTATGG+TGG 0.524034 tig0022086:+6262 Msa1396770:three_prime_UTR
CCACCAACCTTGTTGATGCT+GGG 0.525257 tig0022086:-4895 None:intergenic
GAGAAGTGTGAGAATGGAGA+AGG 0.527335 tig0022086:-723 None:intergenic
TCTTCACCTTCTTCTACTCC+GGG 0.529181 tig0022086:+1367 Msa1396770:CDS
AAAAGAATCTTAGACATGGC+TGG 0.533331 tig0022086:+1016 Msa1396770:exon
GCAAATTTATGTCAAGTTTG+TGG 0.534899 tig0022086:-5910 None:intergenic
GCAGTGCCTGAAAACGGAGT+TGG 0.535934 tig0022086:+1085 Msa1396770:CDS
ATGGCTGGTAATTGTTCAGA+AGG 0.538081 tig0022086:+1031 Msa1396770:CDS
ATTTGGAGCAAAATCATCAT+GGG 0.540073 tig0022086:+1200 Msa1396770:CDS
CCCGCTCAGCAATGCTGTGG+GGG 0.544277 tig0022086:-4739 None:intergenic
GTCTTGAGCATGAGTAGACT+TGG 0.551854 tig0022086:+5400 Msa1396770:CDS
GTGGGGACATTTAAAAGGAA+AGG 0.551964 tig0022086:+6368 Msa1396770:three_prime_UTR
CATGGTGGTTCTTTGAGAGG+AGG 0.554634 tig0022086:+1142 Msa1396770:CDS
GGTTTCACACACACCACGTA+CGG 0.555224 tig0022086:+866 Msa1396770:five_prime_UTR
CCTCGAGTGCGAGCAAGAAG+AGG 0.556095 tig0022086:+4704 Msa1396770:CDS
CCTCTTCTTGCTCGCACTCG+AGG 0.556798 tig0022086:-4704 None:intergenic
TGGAACCAACCAGCAAGCCT+GGG 0.559582 tig0022086:+5659 Msa1396770:CDS
TTTGTAGCTTTGCAAAATCA+CGG 0.562726 tig0022086:-6038 None:intergenic
TTGAGCATGAGTAGACTTGG+TGG 0.564283 tig0022086:+5403 Msa1396770:CDS
TGATGTTCCCGTTTCTGCAG+TGG 0.567967 tig0022086:+5453 Msa1396770:CDS
GTGATTCCCGGAGTAGAAGA+AGG 0.573165 tig0022086:-1373 None:intergenic
CCTCATGGTGGTTCTTTGAG+AGG 0.573318 tig0022086:+1139 Msa1396770:CDS
GGGGTTGAGATTGGAGCATG+GGG 0.575204 tig0022086:-2361 None:intergenic
TAGGGATTCGATGCAGATGA+GGG 0.576882 tig0022086:+2283 Msa1396770:CDS
ACCAGCAAGCCTGGGCGAAG+TGG 0.578504 tig0022086:+5667 Msa1396770:CDS
AAACTTATGGAGGAAGATGT+TGG 0.580007 tig0022086:+5720 Msa1396770:CDS
AGAGAGAAAGAGATGAGTGG+TGG 0.581534 tig0022086:-697 None:intergenic
ACTGCCATGCCACAACCACC+TGG 0.582186 tig0022086:+4674 Msa1396770:CDS
GATGCCAGGTGGTTGTGGCA+TGG 0.582703 tig0022086:-4678 None:intergenic
ACCCCACCATAGATATTTGG+AGG 0.584289 tig0022086:-6265 None:intergenic
TTACCCGCTCAGCAATGCTG+TGG 0.587723 tig0022086:-4742 None:intergenic
TATTATAGAGAAGAACAAAA+CGG 0.589619 tig0022086:-539 None:intergenic
ACCCGCTCAGCAATGCTGTG+GGG 0.594692 tig0022086:-4740 None:intergenic
AGGTGAAGAAGTGATATTGT+TGG 0.604742 tig0022086:-1353 None:intergenic
CAAAGAACCACCATGAGGTG+TGG 0.604934 tig0022086:-1134 None:intergenic
CGTACAGGTTGAGCATGAGT+AGG 0.607775 tig0022086:-2338 None:intergenic
TGGGCGAAGTGGTCGAACGA+TGG 0.612445 tig0022086:+5678 Msa1396770:CDS
TATGCAACTTCTTCAATCCA+AGG 0.620224 tig0022086:+5749 Msa1396770:CDS
CGTGGTGTGTGTGAAACCCT+AGG 0.621190 tig0022086:-861 None:intergenic
TGATGGTGAAGGTGAAGTTG+GGG 0.622929 tig0022086:-2389 None:intergenic
AGCCCAGTATGTCATTGTCA+TGG 0.623507 tig0022086:+6202 Msa1396770:three_prime_UTR
ACAAGTGGCTAAACTTATGG+AGG 0.629716 tig0022086:+5710 Msa1396770:CDS
AGAAGAGAGAAAGAGATGAG+TGG 0.629836 tig0022086:-700 None:intergenic
CGATGGAACAGAACAACAAG+TGG 0.630398 tig0022086:+5695 Msa1396770:CDS
ATTGTTGATGAGTCTGATTG+AGG 0.631316 tig0022086:-5819 None:intergenic
ATTAGTTCCCAGCATCAACA+AGG 0.633940 tig0022086:+4888 Msa1396770:CDS
ATAGGGATTCGATGCAGATG+AGG 0.634626 tig0022086:+2282 Msa1396770:CDS
CCTGTTGGTGTTGATGGTGA+AGG 0.638335 tig0022086:-2400 None:intergenic
AGAAAATGGTGAGTGCGCTA+TGG 0.640156 tig0022086:-643 None:intergenic
GAAAACGGAGTTGGATATGG+AGG 0.644549 tig0022086:+1094 Msa1396770:CDS
GGCAGCATCAAGATGCAACA+CGG 0.647342 tig0022086:+1230 Msa1396770:CDS
TAGGAGTAACATTCTATGTG+TGG 0.651108 tig0022086:-5863 None:intergenic
GGCATGGCAGTAACAGACGC+TGG 0.657355 tig0022086:-4662 None:intergenic
TGTTCCCGTTTCTGCAGTGG+AGG 0.663300 tig0022086:+5456 Msa1396770:CDS
AGTATATGTTGGTATCACAC+TGG 0.663341 tig0022086:+5991 Msa1396770:three_prime_UTR
AGGGATTCGATGCAGATGAG+GGG 0.670786 tig0022086:+2284 Msa1396770:CDS
AAAGAAAAGAATCTTAGACA+TGG 0.683086 tig0022086:+1012 Msa1396770:exon
ACTCGAGGACGGATGCCAGG+TGG 0.696377 tig0022086:-4689 None:intergenic
CCTCTCAAAGAACCACCATG+AGG 0.722555 tig0022086:-1139 None:intergenic
AATTACATCTGGTATCACGG+TGG 0.729558 tig0022086:-6112 None:intergenic
GTAGCTTTGCAAAATCACGG+TGG 0.732276 tig0022086:-6035 None:intergenic
TTAGGTTCCACACCTCATGG+TGG 0.737960 tig0022086:+1127 Msa1396770:CDS
GTGGTTGTAGACTGACAAAG+CGG 0.742255 tig0022086:+5027 Msa1396770:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTATATAAAATATATAT+TGG + tig0022086:2037-2056 Msa1396770:intron 0.0%
!! TAAAAATAAAAATAAATTAT+AGG - tig0022086:3458-3477 None:intergenic 0.0%
!! TTATAAATATAATTATATAT+AGG - tig0022086:4970-4989 None:intergenic 0.0%
!!! ATAATATTTTGTCTTTATAT+AGG - tig0022086:2685-2704 None:intergenic 10.0%
!! ATCCTAATATTTAATAATTA+AGG + tig0022086:2848-2867 Msa1396770:intron 10.0%
!! TCCTAATATTTAATAATTAA+GGG + tig0022086:2849-2868 Msa1396770:intron 10.0%
!! TCATTAACATTAAAAAAATT+TGG - tig0022086:3433-3452 None:intergenic 10.0%
!!! TAAAAATACATTTTTTTTTC+CGG + tig0022086:3981-4000 Msa1396770:intron 10.0%
!! ATTTGATATTACAAAAATTT+AGG + tig0022086:4535-4554 Msa1396770:intron 10.0%
!! TTTGATATTACAAAAATTTA+GGG + tig0022086:4536-4555 Msa1396770:intron 10.0%
!! AATAAAATGTAATAGAAAAG+TGG - tig0022086:1874-1893 None:intergenic 15.0%
!!! GTAATTTGAAGTTATATATA+TGG + tig0022086:2244-2263 Msa1396770:intron 15.0%
!! TAGTATAATAGATAAATGAT+TGG - tig0022086:2506-2525 None:intergenic 15.0%
!! TATATATTATTAAGATGAGA+AGG - tig0022086:2596-2615 None:intergenic 15.0%
!! TTATAAAATGAATGAATGAA+CGG - tig0022086:2796-2815 None:intergenic 15.0%
!! AATAAAATATACATAAGCTA+AGG + tig0022086:2825-2844 Msa1396770:intron 15.0%
!! TCCCTTAATTATTAAATATT+AGG - tig0022086:2853-2872 None:intergenic 15.0%
!!! AATTTTTTAAACATGAATCA+AGG - tig0022086:3040-3059 None:intergenic 15.0%
!!! TTTTTAACTAACATTTCAAA+AGG - tig0022086:3178-3197 None:intergenic 15.0%
!! AACATATGAATCAAATTAAA+TGG - tig0022086:5373-5392 None:intergenic 15.0%
!! TAAAGAATATGAAGTAAAAA+TGG - tig0022086:5536-5555 None:intergenic 15.0%
!!! ATTTTAATTGTAGTATATGT+TGG + tig0022086:5980-5999 Msa1396770:three_prime_UTR 15.0%
!! AAGAAAAAAAAAATTACATC+TGG - tig0022086:6126-6145 None:intergenic 15.0%
!!! CCACTAAAAATAAAATATTT+TGG - tig0022086:6304-6323 None:intergenic 15.0%
!!! CCAAAATATTTTATTTTTAG+TGG + tig0022086:6301-6320 Msa1396770:three_prime_UTR 15.0%
!! TATTATAGAGAAGAACAAAA+CGG - tig0022086:542-561 None:intergenic 20.0%
!! CTTAATTAGAAGATTGATTA+TGG - tig0022086:778-797 None:intergenic 20.0%
!! AAACAAAACAAAAACATTCT+TGG + tig0022086:803-822 Msa1396770:five_prime_UTR 20.0%
!! AACAAAACAAAAACATTCTT+GGG + tig0022086:804-823 Msa1396770:five_prime_UTR 20.0%
!! GAAAATGGAATAGAATTTAT+GGG - tig0022086:837-856 None:intergenic 20.0%
!! TGAAAATGGAATAGAATTTA+TGG - tig0022086:838-857 None:intergenic 20.0%
!!! ATAAATTCTATTCCATTTTC+AGG + tig0022086:837-856 Msa1396770:five_prime_UTR 20.0%
!!! ATGATGATTGTTGTTATTAT+TGG - tig0022086:1293-1312 None:intergenic 20.0%
!!! AAAGAGAGTATTGTTATTTA+TGG + tig0022086:2215-2234 Msa1396770:intron 20.0%
!! ATGATAAAGATAATGTCAAA+AGG + tig0022086:2541-2560 Msa1396770:intron 20.0%
!! TGATAAAGATAATGTCAAAA+GGG + tig0022086:2542-2561 Msa1396770:intron 20.0%
!!! TTTTGTCTTTATATAGGTTT+AGG - tig0022086:2679-2698 None:intergenic 20.0%
!! CTTAAATATTAATCATCAAG+AGG - tig0022086:2759-2778 None:intergenic 20.0%
!! TGTTAATTTCAATTCTTCAA+GGG + tig0022086:2972-2991 Msa1396770:intron 20.0%
!!! TATTTTCATTTGCAGAATTA+CGG + tig0022086:2998-3017 Msa1396770:intron 20.0%
!!! ACTTTTTAAGGTATTACATA+GGG + tig0022086:4029-4048 Msa1396770:intron 20.0%
!! AAAAATAAGGTGAATACATA+GGG + tig0022086:4128-4147 Msa1396770:intron 20.0%
!! AAAAATAAGGTGAATACATA+GGG + tig0022086:4128-4147 Msa1396770:intron 20.0%
!! TTGAGTATTATAAGAAAGAA+TGG - tig0022086:4449-4468 None:intergenic 20.0%
!! TGTTTAATATTATGAAACTG+TGG + tig0022086:5008-5027 Msa1396770:intron 20.0%
!! CTATTTCAAAATGAATTTCA+AGG - tig0022086:5164-5183 None:intergenic 20.0%
!!! TTTGAAATAGAAGTAATTGA+AGG + tig0022086:5174-5193 Msa1396770:intron 20.0%
!! TTGAAATAGAAGTAATTGAA+GGG + tig0022086:5175-5194 Msa1396770:intron 20.0%
!! TTCAAATTTATAAATGGTTC+AGG - tig0022086:5503-5522 None:intergenic 20.0%
!! ATTAACCTTATGAAAAAGTA+GGG - tig0022086:5948-5967 None:intergenic 20.0%
!! AATTAACCTTATGAAAAAGT+AGG - tig0022086:5949-5968 None:intergenic 20.0%
!!! GTATAACTTTTGAAAAATCA+CGG + tig0022086:6061-6080 Msa1396770:three_prime_UTR 20.0%
!! TTTGTAATGTATCATGTATT+TGG + tig0022086:6398-6417 Msa1396770:three_prime_UTR 20.0%
!!! CTTGTATTTCTTTAGTTTTG+CGG + tig0022086:577-596 Msa1396770:five_prime_UTR 25.0%
!!! TTGTATTTCTTTAGTTTTGC+GGG + tig0022086:578-597 Msa1396770:five_prime_UTR 25.0%
!!! TTTTTGTTGTTCTGAGAAAA+TGG - tig0022086:660-679 None:intergenic 25.0%
! AAATAGAAAACACAAAAAGC+AGG - tig0022086:911-930 None:intergenic 25.0%
!!! ATTCTTTTCTTTTTTCAGCT+AGG - tig0022086:1004-1023 None:intergenic 25.0%
! AAAGAAAAGAATCTTAGACA+TGG + tig0022086:1012-1031 Msa1396770:exon 25.0%
! GAGAAATAATTTATGAAGCA+CGG - tig0022086:1608-1627 None:intergenic 25.0%
! ATTAATCCTGAATCATATCT+TGG + tig0022086:1724-1743 Msa1396770:intron 25.0%
!! ATAACCAAAACCAAATGTTT+TGG - tig0022086:1828-1847 None:intergenic 25.0%
!!! TGGTTTTGGTTATTGTTATT+AGG + tig0022086:1835-1854 Msa1396770:intron 25.0%
! ATAGAAAATTATATCGCTCA+AGG + tig0022086:2184-2203 Msa1396770:intron 25.0%
! ATATTAATGATGATACCTGT+TGG - tig0022086:2418-2437 None:intergenic 25.0%
! GATAAATGATTGGAAAATGA+GGG - tig0022086:2496-2515 None:intergenic 25.0%
! AGATAAATGATTGGAAAATG+AGG - tig0022086:2497-2516 None:intergenic 25.0%
!! CTTTTCTTTATGCTTTGTAA+AGG - tig0022086:2733-2752 None:intergenic 25.0%
! GTGTTAATTTCAATTCTTCA+AGG + tig0022086:2971-2990 Msa1396770:intron 25.0%
!! ATTTTCATTTGCAGAATTAC+GGG + tig0022086:2999-3018 Msa1396770:intron 25.0%
! TTAAACATGAATCAAGGAAA+GGG - tig0022086:3034-3053 None:intergenic 25.0%
! TTTAAACATGAATCAAGGAA+AGG - tig0022086:3035-3054 None:intergenic 25.0%
! TAACATTTCAAAAGGAATTG+GGG - tig0022086:3170-3189 None:intergenic 25.0%
! CTAACATTTCAAAAGGAATT+GGG - tig0022086:3171-3190 None:intergenic 25.0%
! ACTAACATTTCAAAAGGAAT+TGG - tig0022086:3172-3191 None:intergenic 25.0%
!! ATTAGAAATGAGTTACCTTT+TGG - tig0022086:3656-3675 None:intergenic 25.0%
!!! TACAAGTAAGAGTATTGATT+TGG - tig0022086:3884-3903 None:intergenic 25.0%
! AAATCAATACTCTTACTTGT+AGG + tig0022086:3883-3902 Msa1396770:intron 25.0%
! AATCAATACTCTTACTTGTA+GGG + tig0022086:3884-3903 Msa1396770:intron 25.0%
!!! TGGTTAGAATTCACTTTTTA+AGG + tig0022086:4017-4036 Msa1396770:intron 25.0%
!!! CACTTTTTAAGGTATTACAT+AGG + tig0022086:4028-4047 Msa1396770:intron 25.0%
! CAAAAATAAGGTGAATACAT+AGG + tig0022086:4127-4146 Msa1396770:intron 25.0%
! CAAAAATAAGGTGAATACAT+AGG + tig0022086:4127-4146 Msa1396770:intron 25.0%
! AGGACAAAAATAACTACTAA+AGG + tig0022086:4321-4340 Msa1396770:intron 25.0%
! AAAGAATGGAACACATTATA+CGG - tig0022086:4435-4454 None:intergenic 25.0%
! AGCAGGTTAAAAAAATCATT+GGG - tig0022086:5335-5354 None:intergenic 25.0%
! AAGCAGGTTAAAAAAATCAT+TGG - tig0022086:5336-5355 None:intergenic 25.0%
! TTTGATTCATATGTTGAAAC+AGG + tig0022086:5378-5397 Msa1396770:intron 25.0%
! GGCATCTTCAAATTTATAAA+TGG - tig0022086:5509-5528 None:intergenic 25.0%
!!! CATTTTTTTTGTTAGCTACT+AGG - tig0022086:5885-5904 None:intergenic 25.0%
! AAAAATTACATCTGGTATCA+CGG - tig0022086:6118-6137 None:intergenic 25.0%
! CTGATAATAAGTGAAATTAG+AGG + tig0022086:6179-6198 Msa1396770:three_prime_UTR 25.0%
! TTGGAGGAAAAAATTCAATA+GGG - tig0022086:6252-6271 None:intergenic 25.0%
! TTTGGAGGAAAAAATTCAAT+AGG - tig0022086:6253-6272 None:intergenic 25.0%
!!! TTTTTTCCTCCAAATATCTA+TGG + tig0022086:6259-6278 Msa1396770:three_prime_UTR 25.0%
! AAATGCTGCAGTATTGAAAA+AGG + tig0022086:950-969 Msa1396770:five_prime_UTR 30.0%
!!! AGGTTATTAGTTTTGTGTAG+TGG - tig0022086:984-1003 None:intergenic 30.0%
! AATTTGGAGCAAAATCATCA+TGG + tig0022086:1199-1218 Msa1396770:CDS 30.0%
! ATTTGGAGCAAAATCATCAT+GGG + tig0022086:1200-1219 Msa1396770:CDS 30.0%
TCCCTATAAAGCACATATAT+AGG + tig0022086:1436-1455 Msa1396770:intron 30.0%
GCCTATATATGTGCTTTATA+GGG - tig0022086:1440-1459 None:intergenic 30.0%
TGCCTATATATGTGCTTTAT+AGG - tig0022086:1441-1460 None:intergenic 30.0%
! AGTGATTAGTTAATAGTGCT+CGG + tig0022086:1753-1772 Msa1396770:intron 30.0%
AGAAGTTATGCCAAAACATT+TGG + tig0022086:1815-1834 Msa1396770:intron 30.0%
!! TATGCCAAAACATTTGGTTT+TGG + tig0022086:1821-1840 Msa1396770:intron 30.0%
GTCTAGCACAAATTATTGAA+TGG + tig0022086:2102-2121 Msa1396770:intron 30.0%
! TGTGTGAATGTTTAAAACGA+TGG + tig0022086:2134-2153 Msa1396770:intron 30.0%
! ATATAGGTTTAGGTTTGAGT+GGG - tig0022086:2669-2688 None:intergenic 30.0%
! TATATAGGTTTAGGTTTGAG+TGG - tig0022086:2670-2689 None:intergenic 30.0%
TAATACTGATATTTCACTCG+AGG - tig0022086:2914-2933 None:intergenic 30.0%
TCGAGTGAAATATCAGTATT+AGG + tig0022086:2913-2932 Msa1396770:intron 30.0%
TAAACATGAATCAAGGAAAG+GGG - tig0022086:3033-3052 None:intergenic 30.0%
AACATTTCAAAAGGAATTGG+GGG - tig0022086:3169-3188 None:intergenic 30.0%
TCATTAATCACACACTAAAG+TGG - tig0022086:3536-3555 None:intergenic 30.0%
TAAAACAAAAGAAAACGCGT+TGG - tig0022086:3583-3602 None:intergenic 30.0%
AGTAATTGTCCTAGAGTAAT+AGG + tig0022086:3624-3643 Msa1396770:intron 30.0%
AAATAAATGATGGTCCCATT+CGG - tig0022086:3688-3707 None:intergenic 30.0%
! GGACCATCATTTATTTGTTA+GGG + tig0022086:3692-3711 Msa1396770:intron 30.0%
AAGCCCTAACAAATAAATGA+TGG - tig0022086:3698-3717 None:intergenic 30.0%
TGACGCTTAATCATAATTGT+CGG + tig0022086:3758-3777 Msa1396770:intron 30.0%
TTGACAAGAACTTTAAATGG+AGG - tig0022086:3792-3811 None:intergenic 30.0%
! TCCATTTAAAGTTCTTGTCA+AGG + tig0022086:3791-3810 Msa1396770:intron 30.0%
TCCTTGACAAGAACTTTAAA+TGG - tig0022086:3795-3814 None:intergenic 30.0%
!!! CGTTGATGTATCTTTTTTTC+CGG + tig0022086:3851-3870 Msa1396770:intron 30.0%
!!! GTTGATGTATCTTTTTTTCC+GGG + tig0022086:3852-3871 Msa1396770:intron 30.0%
!!! TTGATGTATCTTTTTTTCCG+GGG + tig0022086:3853-3872 Msa1396770:intron 30.0%
GCGTAGTTAAATATAAGAGT+CGG - tig0022086:4073-4092 None:intergenic 30.0%
GCGTAGTTAAATATAAGAGT+CGG - tig0022086:4073-4092 None:intergenic 30.0%
CATGCAAACTGAGTTATAAT+CGG + tig0022086:4297-4316 Msa1396770:intron 30.0%
ATGCAAACTGAGTTATAATC+GGG + tig0022086:4298-4317 Msa1396770:intron 30.0%
AATTGCATTTACGTACGTTA+TGG + tig0022086:4505-4524 Msa1396770:intron 30.0%
TTGATTATGTGAAGTTCCTT+AGG + tig0022086:5068-5087 Msa1396770:CDS 30.0%
TCTTTACACATACCTTAACT+TGG - tig0022086:5096-5115 None:intergenic 30.0%
! GATCCTTCTTGATTTTCATT+TGG + tig0022086:5114-5133 Msa1396770:intron 30.0%
CAGGTTAAAAAAATCATTGG+GGG - tig0022086:5333-5352 None:intergenic 30.0%
GCAGGTTAAAAAAATCATTG+GGG - tig0022086:5334-5353 None:intergenic 30.0%
GCAAATTTATGTCAAGTTTG+TGG - tig0022086:5913-5932 None:intergenic 30.0%
GAAAAAGTAGGGAGAAATAT+TGG - tig0022086:5937-5956 None:intergenic 30.0%
!!! TTTCTCCCTACTTTTTCATA+AGG + tig0022086:5940-5959 Msa1396770:three_prime_UTR 30.0%
! TTTGTAGCTTTGCAAAATCA+CGG - tig0022086:6041-6060 None:intergenic 30.0%
TGGATATATATGTCAGAATC+AGG - tig0022086:6095-6114 None:intergenic 30.0%
!!! CTTTTTGTTTTTTGAGTCAG+TGG + tig0022086:6342-6361 Msa1396770:three_prime_UTR 30.0%
!!! TATTCCATTTTCAGGTCCTA+GGG + tig0022086:845-864 Msa1396770:five_prime_UTR 35.0%
AACACAAAAAGCAGGAAACA+AGG - tig0022086:903-922 None:intergenic 35.0%
AAAAGAATCTTAGACATGGC+TGG + tig0022086:1016-1035 Msa1396770:exon 35.0%
GGTAATTGTTCAGAAGGATT+AGG + tig0022086:1037-1056 Msa1396770:CDS 35.0%
!! AATGCCTTTAGGGTTGAATT+TGG + tig0022086:1183-1202 Msa1396770:CDS 35.0%
AAAATCATCATGGGTTTCTC+AGG + tig0022086:1209-1228 Msa1396770:CDS 35.0%
GATAACGTTGTTGATGTTGA+AGG + tig0022086:1259-1278 Msa1396770:CDS 35.0%
AGGTGAAGAAGTGATATTGT+TGG - tig0022086:1356-1375 None:intergenic 35.0%
TGAAAACATACAGTGATTCC+CGG - tig0022086:1388-1407 None:intergenic 35.0%
CTCAAATTACTAGCTATGTC+AGG - tig0022086:1494-1513 None:intergenic 35.0%
AATCCTGAATCATATCTTGG+AGG + tig0022086:1727-1746 Msa1396770:intron 35.0%
TAACCTCCAAGATATGATTC+AGG - tig0022086:1733-1752 None:intergenic 35.0%
ATTAGTTAATAGTGCTCGGT+GGG + tig0022086:1757-1776 Msa1396770:intron 35.0%
GTCCAAGATCTTACTTAGTT+AGG + tig0022086:2158-2177 Msa1396770:intron 35.0%
TGCCTAACTAAGTAAGATCT+TGG - tig0022086:2163-2182 None:intergenic 35.0%
! ATATATGGTTTGTCTCTTGC+AGG + tig0022086:2259-2278 Msa1396770:intron 35.0%
TTGGAAAATGAGGGACAATA+TGG - tig0022086:2487-2506 None:intergenic 35.0%
GAGCTACTAATACTCTTCTT+TGG - tig0022086:2572-2591 None:intergenic 35.0%
ATATTTAAGCGCTTCATCCA+TGG + tig0022086:2770-2789 Msa1396770:intron 35.0%
TCACTCGAGGAAAAAGAAAA+AGG - tig0022086:2901-2920 None:intergenic 35.0%
GGGACCATCATTTATTTGTT+AGG + tig0022086:3691-3710 Msa1396770:intron 35.0%
!! GTATTGATTTGGTAAAACCC+CGG - tig0022086:3873-3892 None:intergenic 35.0%
TAACCATTAAGCTCTTTGAC+CGG - tig0022086:4003-4022 None:intergenic 35.0%
CATGCAAACTGAGTTATACT+CGG + tig0022086:4099-4118 Msa1396770:intron 35.0%
ATGCAAACTGAGTTATACTC+GGG + tig0022086:4100-4119 Msa1396770:intron 35.0%
CATGCAAACTGAGTTATACT+CGG + tig0022086:4099-4118 Msa1396770:intron 35.0%
ATGCAAACTGAGTTATACTC+GGG + tig0022086:4100-4119 Msa1396770:intron 35.0%
GCGTAGTTAAGTATAAGAGT+CGG - tig0022086:4271-4290 None:intergenic 35.0%
CGATTATAACTCAGTTTGCA+TGG - tig0022086:4299-4318 None:intergenic 35.0%
TTGATCAAGATTCGTATGCA+TGG + tig0022086:4362-4381 Msa1396770:intron 35.0%
! AAGTGCTGCAATATTGCAAT+GGG - tig0022086:4623-4642 None:intergenic 35.0%
!! AAAGTGCTGCAATATTGCAA+TGG - tig0022086:4624-4643 None:intergenic 35.0%
!! TGAAAGAATGAAAGCATTGC+AGG + tig0022086:4864-4883 Msa1396770:CDS 35.0%
GAGCCAAATGAAAATCAAGA+AGG - tig0022086:5120-5139 None:intergenic 35.0%
!!! AGGGTTGCTTTTGAAAATTC+AGG + tig0022086:5194-5213 Msa1396770:intron 35.0%
GGCATGTAAAAGAATTAAGC+AGG - tig0022086:5352-5371 None:intergenic 35.0%
ACAACAAGTGGCTAAACTTA+TGG + tig0022086:5707-5726 Msa1396770:CDS 35.0%
AAACTTATGGAGGAAGATGT+TGG + tig0022086:5720-5739 Msa1396770:CDS 35.0%
TATGCAACTTCTTCAATCCA+AGG + tig0022086:5749-5768 Msa1396770:CDS 35.0%
ATTGCTGATGCTAGAGATAT+AGG - tig0022086:5789-5808 None:intergenic 35.0%
! ATTGTTGATGAGTCTGATTG+AGG - tig0022086:5822-5841 None:intergenic 35.0%
TATGTGTGGTTGTTTGATTC+AGG - tig0022086:5852-5871 None:intergenic 35.0%
TAGGAGTAACATTCTATGTG+TGG - tig0022086:5866-5885 None:intergenic 35.0%
AGTATATGTTGGTATCACAC+TGG + tig0022086:5991-6010 Msa1396770:three_prime_UTR 35.0%
TTTCCTCCAAATATCTATGG+TGG + tig0022086:6262-6281 Msa1396770:three_prime_UTR 35.0%
TTCCTCCAAATATCTATGGT+GGG + tig0022086:6263-6282 Msa1396770:three_prime_UTR 35.0%
!!! TTTTTTGAGTCAGTGGAAAG+TGG + tig0022086:6349-6368 Msa1396770:three_prime_UTR 35.0%
!!! TTTTTGAGTCAGTGGAAAGT+GGG + tig0022086:6350-6369 Msa1396770:three_prime_UTR 35.0%
AGAAGAGAGAAAGAGATGAG+TGG - tig0022086:703-722 None:intergenic 40.0%
!!! CTATTCCATTTTCAGGTCCT+AGG + tig0022086:844-863 Msa1396770:five_prime_UTR 40.0%
ATGGCTGGTAATTGTTCAGA+AGG + tig0022086:1031-1050 Msa1396770:CDS 40.0%
ATCTTAGCAGTGCCTGAAAA+CGG + tig0022086:1079-1098 Msa1396770:CDS 40.0%
!! TATGGAGGAGTGTTGCAATT+AGG + tig0022086:1109-1128 Msa1396770:CDS 40.0%
GAGGAGGAATAATGCCTTTA+GGG + tig0022086:1173-1192 Msa1396770:CDS 40.0%
TGCTCCAAATTCAACCCTAA+AGG - tig0022086:1190-1209 None:intergenic 40.0%
TTCTTCACCTTCTTCTACTC+CGG + tig0022086:1366-1385 Msa1396770:CDS 40.0%
! GATTAGTTAATAGTGCTCGG+TGG + tig0022086:1756-1775 Msa1396770:intron 40.0%
!! AGGGGTTTGTTTTCAACGTT+TGG + tig0022086:2302-2321 Msa1396770:CDS 40.0%
!! TTGATGGTGAAGGTGAAGTT+GGG - tig0022086:2393-2412 None:intergenic 40.0%
!! ATGATACCTGTTGGTGTTGA+TGG - tig0022086:2409-2428 None:intergenic 40.0%
!! GTTTAGGTTTGAGTGGGTTA+CGG - tig0022086:2663-2682 None:intergenic 40.0%
AATGAATGAATGAACGGCCA+TGG - tig0022086:2790-2809 None:intergenic 40.0%
! TCCTTTAGCCTTTCTACTTG+CGG + tig0022086:2937-2956 Msa1396770:intron 40.0%
TGTCCTAGAGTAATAGGCAT+TGG + tig0022086:3630-3649 Msa1396770:intron 40.0%
!! AGTAATAGGCATTGGCCAAA+AGG + tig0022086:3638-3657 Msa1396770:intron 40.0%
TTTCCGGTCAAAGAGCTTAA+TGG + tig0022086:3997-4016 Msa1396770:intron 40.0%
CGAGTATAACTCAGTTTGCA+TGG - tig0022086:4101-4120 None:intergenic 40.0%
TACTCGGGAGGACAAAAATA+AGG + tig0022086:4115-4134 Msa1396770:intron 40.0%
CGAGTATAACTCAGTTTGCA+TGG - tig0022086:4101-4120 None:intergenic 40.0%
TACTCGGGAGGACAAAAATA+AGG + tig0022086:4115-4134 Msa1396770:intron 40.0%
CAAACTGAGTTATAATCGGG+AGG + tig0022086:4301-4320 Msa1396770:intron 40.0%
AGATTCGTATGCATGGAAGT+AGG + tig0022086:4369-4388 Msa1396770:intron 40.0%
! AACACATTATACGGCTAGCT+AGG - tig0022086:4426-4445 None:intergenic 40.0%
ATTAGTTCCCAGCATCAACA+AGG + tig0022086:4888-4907 Msa1396770:CDS 40.0%
! ATACCTTAACTTGGAGCCTA+AGG - tig0022086:5087-5106 None:intergenic 40.0%
AACTCTATGATCTGTGTGCA+GGG + tig0022086:5621-5640 Msa1396770:intron 40.0%
ACAAGTGGCTAAACTTATGG+AGG + tig0022086:5710-5729 Msa1396770:CDS 40.0%
AATTACATCTGGTATCACGG+TGG - tig0022086:6115-6134 None:intergenic 40.0%
!! TCTTCGAGTTTTGTCAGACT+AGG + tig0022086:6142-6161 Msa1396770:three_prime_UTR 40.0%
CACCATGACAATGACATACT+GGG - tig0022086:6207-6226 None:intergenic 40.0%
TCACCATGACAATGACATAC+TGG - tig0022086:6208-6227 None:intergenic 40.0%
TCCTCCAAATATCTATGGTG+GGG + tig0022086:6264-6283 Msa1396770:three_prime_UTR 40.0%
!! TTTTGAGTCAGTGGAAAGTG+GGG + tig0022086:6351-6370 Msa1396770:three_prime_UTR 40.0%
GGAAAGTGGGGACATTTAAA+AGG + tig0022086:6363-6382 Msa1396770:three_prime_UTR 40.0%
GTGGGGACATTTAAAAGGAA+AGG + tig0022086:6368-6387 Msa1396770:three_prime_UTR 40.0%
AGAAAATGGTGAGTGCGCTA+TGG - tig0022086:646-665 None:intergenic 45.0%
AGAGAGAAAGAGATGAGTGG+TGG - tig0022086:700-719 None:intergenic 45.0%
! GAGAAGTGTGAGAATGGAGA+AGG - tig0022086:726-745 None:intergenic 45.0%
! GTGAGTGAGAAGTGTGAGAA+TGG - tig0022086:732-751 None:intergenic 45.0%
GAAACCCTAGGACCTGAAAA+TGG - tig0022086:852-871 None:intergenic 45.0%
! CCATATCCAACTCCGTTTTC+AGG - tig0022086:1094-1113 None:intergenic 45.0%
CCTGAAAACGGAGTTGGATA+TGG + tig0022086:1091-1110 Msa1396770:CDS 45.0%
GAAAACGGAGTTGGATATGG+AGG + tig0022086:1094-1113 Msa1396770:CDS 45.0%
CAATTAGGTTCCACACCTCA+TGG + tig0022086:1124-1143 Msa1396770:CDS 45.0%
GGAGGAGGAATAATGCCTTT+AGG + tig0022086:1172-1191 Msa1396770:CDS 45.0%
TCTTCACCTTCTTCTACTCC+GGG + tig0022086:1367-1386 Msa1396770:CDS 45.0%
! TGGTTTGTCTCTTGCAGGAT+AGG + tig0022086:2264-2283 Msa1396770:intron 45.0%
GGTTTGTCTCTTGCAGGATA+GGG + tig0022086:2265-2284 Msa1396770:intron 45.0%
ATAGGGATTCGATGCAGATG+AGG + tig0022086:2282-2301 Msa1396770:CDS 45.0%
TAGGGATTCGATGCAGATGA+GGG + tig0022086:2283-2302 Msa1396770:CDS 45.0%
! TGATGGTGAAGGTGAAGTTG+GGG - tig0022086:2392-2411 None:intergenic 45.0%
!! GTTGATGGTGAAGGTGAAGT+TGG - tig0022086:2394-2413 None:intergenic 45.0%
TCCGCAAGTAGAAAGGCTAA+AGG - tig0022086:2941-2960 None:intergenic 45.0%
! AGACTTTTAGCAGCATAGCG+TGG + tig0022086:3131-3150 Msa1396770:intron 45.0%
TGGCCAATGCCTATTACTCT+AGG - tig0022086:3636-3655 None:intergenic 45.0%
TCTAATAGCCTCGTACCGAA+TGG + tig0022086:3670-3689 Msa1396770:intron 45.0%
CTAATAGCCTCGTACCGAAT+GGG + tig0022086:3671-3690 Msa1396770:intron 45.0%
! GGTATTACATAGGGTGTCTG+AGG + tig0022086:4038-4057 Msa1396770:intron 45.0%
CAAACTGAGTTATACTCGGG+AGG + tig0022086:4103-4122 Msa1396770:intron 45.0%
! GTGAATACATAGGGTGTCTG+AGG + tig0022086:4137-4156 Msa1396770:intron 45.0%
CAAACTGAGTTATACTCGGG+AGG + tig0022086:4103-4122 Msa1396770:intron 45.0%
! GTGAATACATAGGGTGTCTG+AGG + tig0022086:4137-4156 Msa1396770:intron 45.0%
GTGGTTGTAGACTGACAAAG+CGG + tig0022086:5027-5046 Msa1396770:intron 45.0%
GTTCCTTAGGCTCCAAGTTA+AGG + tig0022086:5081-5100 Msa1396770:CDS 45.0%
GTCTTGAGCATGAGTAGACT+TGG + tig0022086:5400-5419 Msa1396770:CDS 45.0%
TTGAGCATGAGTAGACTTGG+TGG + tig0022086:5403-5422 Msa1396770:CDS 45.0%
TATCACCTCCACTGCAGAAA+CGG - tig0022086:5464-5483 None:intergenic 45.0%
CAACTCTATGATCTGTGTGC+AGG + tig0022086:5620-5639 Msa1396770:intron 45.0%
ACTCTATGATCTGTGTGCAG+GGG + tig0022086:5622-5641 Msa1396770:intron 45.0%
CGATGGAACAGAACAACAAG+TGG + tig0022086:5695-5714 Msa1396770:CDS 45.0%
! AGGCATTATGCAAAGTGCCT+TGG - tig0022086:5769-5788 None:intergenic 45.0%
! GTAGCTTTGCAAAATCACGG+TGG - tig0022086:6038-6057 None:intergenic 45.0%
AGCCCAGTATGTCATTGTCA+TGG + tig0022086:6202-6221 Msa1396770:three_prime_UTR 45.0%
ACCCCACCATAGATATTTGG+AGG - tig0022086:6268-6287 None:intergenic 45.0%
CCAACCCCACCATAGATATT+TGG - tig0022086:6271-6290 None:intergenic 45.0%
! CCAAATATCTATGGTGGGGT+TGG + tig0022086:6268-6287 Msa1396770:three_prime_UTR 45.0%
! AATATCTATGGTGGGGTTGG+TGG + tig0022086:6271-6290 Msa1396770:three_prime_UTR 45.0%
GGTTTCACACACACCACGTA+CGG + tig0022086:866-885 Msa1396770:five_prime_UTR 50.0%
! GGAGAGATGTTTTCCGTACG+TGG - tig0022086:882-901 None:intergenic 50.0%
TTAGGTTCCACACCTCATGG+TGG + tig0022086:1127-1146 Msa1396770:CDS 50.0%
CAAAGAACCACCATGAGGTG+TGG - tig0022086:1137-1156 None:intergenic 50.0%
CCTCTCAAAGAACCACCATG+AGG - tig0022086:1142-1161 None:intergenic 50.0%
CCTCATGGTGGTTCTTTGAG+AGG + tig0022086:1139-1158 Msa1396770:CDS 50.0%
! CATGGTGGTTCTTTGAGAGG+AGG + tig0022086:1142-1161 Msa1396770:CDS 50.0%
GGCAGCATCAAGATGCAACA+CGG + tig0022086:1230-1249 Msa1396770:CDS 50.0%
GTGATTCCCGGAGTAGAAGA+AGG - tig0022086:1376-1395 None:intergenic 50.0%
AGGGATTCGATGCAGATGAG+GGG + tig0022086:2284-2303 Msa1396770:CDS 50.0%
! CGTACAGGTTGAGCATGAGT+AGG - tig0022086:2341-2360 None:intergenic 50.0%
AAGGTGAAGTTGGGGTTGAG+GGG - tig0022086:2384-2403 None:intergenic 50.0%
GAAGGTGAAGTTGGGGTTGA+GGG - tig0022086:2385-2404 None:intergenic 50.0%
TGAAGGTGAAGTTGGGGTTG+AGG - tig0022086:2386-2405 None:intergenic 50.0%
!! CCTGTTGGTGTTGATGGTGA+AGG - tig0022086:2403-2422 None:intergenic 50.0%
CCTTCACCATCAACACCAAC+AGG + tig0022086:2400-2419 Msa1396770:CDS 50.0%
GGAAGTGGCTCATTGGTGTA+TGG - tig0022086:2638-2657 None:intergenic 50.0%
!! AGGTTTGAGTGGGTTACGGA+CGG - tig0022086:2659-2678 None:intergenic 50.0%
GCAGTAACAGACGCTGGATT+TGG - tig0022086:4659-4678 None:intergenic 50.0%
GTTCCCAGCATCAACAAGGT+TGG + tig0022086:4892-4911 Msa1396770:intron 50.0%
CCACCAACCTTGTTGATGCT+GGG - tig0022086:4898-4917 None:intergenic 50.0%
ACCACCAACCTTGTTGATGC+TGG - tig0022086:4899-4918 None:intergenic 50.0%
!! ATGAGTAGACTTGGTGGAGC+TGG + tig0022086:5409-5428 Msa1396770:CDS 50.0%
TGATGTTCCCGTTTCTGCAG+TGG + tig0022086:5453-5472 Msa1396770:CDS 50.0%
ATCACCTCCACTGCAGAAAC+GGG - tig0022086:5463-5482 None:intergenic 50.0%
CTCTATGATCTGTGTGCAGG+GGG + tig0022086:5623-5642 Msa1396770:intron 50.0%
CGTGGTGTGTGTGAAACCCT+AGG - tig0022086:864-883 None:intergenic 55.0%
GCAGTGCCTGAAAACGGAGT+TGG + tig0022086:1085-1104 Msa1396770:CDS 55.0%
! GGTGGTTCTTTGAGAGGAGG+TGG + tig0022086:1145-1164 Msa1396770:CDS 55.0%
! GGTTCTTTGAGAGGAGGTGG+AGG + tig0022086:1148-1167 Msa1396770:CDS 55.0%
! TCTTTGAGAGGAGGTGGAGG+AGG + tig0022086:1151-1170 Msa1396770:CDS 55.0%
GGGGTTGAGATTGGAGCATG+GGG - tig0022086:2364-2383 None:intergenic 55.0%
GGGGGTTGAGATTGGAGCAT+GGG - tig0022086:2365-2384 None:intergenic 55.0%
AGGGGGTTGAGATTGGAGCA+TGG - tig0022086:2366-2385 None:intergenic 55.0%
AGGTGAAGTTGGGGTTGAGG+GGG - tig0022086:2383-2402 None:intergenic 55.0%
TACGGACGGAAGTGGCTCAT+TGG - tig0022086:2645-2664 None:intergenic 55.0%
GAGCGCATCCGCAAGTAGAA+AGG - tig0022086:2948-2967 None:intergenic 55.0%
TGATGGTCCCATTCGGTACG+AGG - tig0022086:3681-3700 None:intergenic 55.0%
! CAGACGCTGGATTTGGTTGC+TGG - tig0022086:4652-4671 None:intergenic 55.0%
TTCTTGCTCGCACTCGAGGA+CGG - tig0022086:4703-4722 None:intergenic 55.0%
TACCCGCTCAGCAATGCTGT+GGG - tig0022086:4744-4763 None:intergenic 55.0%
TTACCCGCTCAGCAATGCTG+TGG - tig0022086:4745-4764 None:intergenic 55.0%
CCCAGCATCAACAAGGTTGG+TGG + tig0022086:4895-4914 Msa1396770:intron 55.0%
TGTTCCCGTTTCTGCAGTGG+AGG + tig0022086:5456-5475 Msa1396770:CDS 55.0%
TATGATCTGTGTGCAGGGGG+AGG + tig0022086:5626-5645 Msa1396770:intron 55.0%
TGGAACCAACCAGCAAGCCT+GGG + tig0022086:5659-5678 Msa1396770:CDS 55.0%
TTGAGAGGAGGTGGAGGAGG+AGG + tig0022086:1154-1173 Msa1396770:CDS 60.0%
GATTGGAGCATGGGGCGTAC+AGG - tig0022086:2356-2375 None:intergenic 60.0%
GGGGTTGAGGGGGTTGAGAT+TGG - tig0022086:2373-2392 None:intergenic 60.0%
!! GAGTGGGTTACGGACGGAAG+TGG - tig0022086:2653-2672 None:intergenic 60.0%
GGCATGGCAGTAACAGACGC+TGG - tig0022086:4665-4684 None:intergenic 60.0%
ACTGCCATGCCACAACCACC+TGG + tig0022086:4674-4693 Msa1396770:CDS 60.0%
GATGCCAGGTGGTTGTGGCA+TGG - tig0022086:4681-4700 None:intergenic 60.0%
CCTCTTCTTGCTCGCACTCG+AGG - tig0022086:4707-4726 None:intergenic 60.0%
CCTCGAGTGCGAGCAAGAAG+AGG + tig0022086:4704-4723 Msa1396770:CDS 60.0%
AGCAATGCTGTGGGGGTCTG+TGG - tig0022086:4735-4754 None:intergenic 60.0%
ACCCCCACAGCATTGCTGAG+CGG + tig0022086:4738-4757 Msa1396770:CDS 60.0%
ACCCGCTCAGCAATGCTGTG+GGG - tig0022086:4743-4762 None:intergenic 60.0%
GTGCAGGGGGAGGACATAGA+AGG + tig0022086:5636-5655 Msa1396770:intron 60.0%
CAGGGGGAGGACATAGAAGG+TGG + tig0022086:5639-5658 Msa1396770:intron 60.0%
GTGGAACCAACCAGCAAGCC+TGG + tig0022086:5658-5677 Msa1396770:CDS 60.0%
ATCGTTCGACCACTTCGCCC+AGG - tig0022086:5679-5698 None:intergenic 60.0%
TGGGCGAAGTGGTCGAACGA+TGG + tig0022086:5678-5697 Msa1396770:CDS 60.0%
AGAGGAGGTGGAGGAGGAGG+AGG + tig0022086:1157-1176 Msa1396770:CDS 65.0%
GGACGGATGCCAGGTGGTTG+TGG - tig0022086:4686-4705 None:intergenic 65.0%
ACTCGAGGACGGATGCCAGG+TGG - tig0022086:4692-4711 None:intergenic 65.0%
TGCTGTGGGGGTCTGTGGCT+TGG - tig0022086:4730-4749 None:intergenic 65.0%
CCCGCTCAGCAATGCTGTGG+GGG - tig0022086:4742-4761 None:intergenic 65.0%
CCCCCACAGCATTGCTGAGC+GGG + tig0022086:4739-4758 Msa1396770:CDS 65.0%
!! CTTCGCCCAGGCTTGCTGGT+TGG - tig0022086:5667-5686 None:intergenic 65.0%
ACCAGCAAGCCTGGGCGAAG+TGG + tig0022086:5667-5686 Msa1396770:CDS 65.0%
ACCACTTCGCCCAGGCTTGC+TGG - tig0022086:5671-5690 None:intergenic 65.0%
CGCACTCGAGGACGGATGCC+AGG - tig0022086:4695-4714 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0022086 gene 529 6450 529 ID=Msa1396770;Name=Msa1396770
tig0022086 mRNA 529 6450 529 ID=Msa1396770-mRNA-1;Parent=Msa1396770;Name=Msa1396770-mRNA-1;_AED=0.03;_eAED=0.03;_QI=502|1|1|1|1|1|7|578|356
tig0022086 exon 529 1396 529 ID=Msa1396770-mRNA-1:exon:15705;Parent=Msa1396770-mRNA-1
tig0022086 exon 2281 2421 2281 ID=Msa1396770-mRNA-1:exon:15706;Parent=Msa1396770-mRNA-1
tig0022086 exon 4638 4760 4638 ID=Msa1396770-mRNA-1:exon:15707;Parent=Msa1396770-mRNA-1
tig0022086 exon 4844 4909 4844 ID=Msa1396770-mRNA-1:exon:15708;Parent=Msa1396770-mRNA-1
tig0022086 exon 5037 5102 5037 ID=Msa1396770-mRNA-1:exon:15709;Parent=Msa1396770-mRNA-1
tig0022086 exon 5400 5477 5400 ID=Msa1396770-mRNA-1:exon:15710;Parent=Msa1396770-mRNA-1
tig0022086 exon 5642 6450 5642 ID=Msa1396770-mRNA-1:exon:15711;Parent=Msa1396770-mRNA-1
tig0022086 five_prime_UTR 529 1030 529 ID=Msa1396770-mRNA-1:five_prime_utr;Parent=Msa1396770-mRNA-1
tig0022086 CDS 1031 1396 1031 ID=Msa1396770-mRNA-1:cds;Parent=Msa1396770-mRNA-1
tig0022086 CDS 2281 2421 2281 ID=Msa1396770-mRNA-1:cds;Parent=Msa1396770-mRNA-1
tig0022086 CDS 4638 4760 4638 ID=Msa1396770-mRNA-1:cds;Parent=Msa1396770-mRNA-1
tig0022086 CDS 4844 4909 4844 ID=Msa1396770-mRNA-1:cds;Parent=Msa1396770-mRNA-1
tig0022086 CDS 5037 5102 5037 ID=Msa1396770-mRNA-1:cds;Parent=Msa1396770-mRNA-1
tig0022086 CDS 5400 5477 5400 ID=Msa1396770-mRNA-1:cds;Parent=Msa1396770-mRNA-1
tig0022086 CDS 5642 5872 5642 ID=Msa1396770-mRNA-1:cds;Parent=Msa1396770-mRNA-1
tig0022086 three_prime_UTR 5873 6450 5873 ID=Msa1396770-mRNA-1:three_prime_utr;Parent=Msa1396770-mRNA-1
Gene Sequence

>Msa1396770

ATGGCTGGTAATTGTTCAGAAGGATTAGGTGATGATTTCTTTGAGCAGATCTTAGCAGTGCCTGAAAACGGAGTTGGATATGGAGGAGTGTTGCAATTAGGTTCCACACCTCATGGTGGTTCTTTGAGAGGAGGTGGAGGAGGAGGAGGAATAATGCCTTTAGGGTTGAATTTGGAGCAAAATCATCATGGGTTTCTCAGGCAGCATCAAGATGCAACACGGTTTGTTGATAACGTTGTTGATGTTGAAGGAAATATTACCAATAATAACAACAATCATCATCATCTTCGTCTACATGACATCAATAATCATAACAACAACACCAACAATATCACTTCTTCACCTTCTTCTACTCCGGGAATCACTGATAGGGATTCGATGCAGATGAGGGGTTTGTTTTCAACGTTTGGACAATTGCATACTCCTACTCATGCTCAACCTGTACGCCCCATGCTCCAATCTCAACCCCCTCAACCCCAACTTCACCTTCACCATCAACACCAACAGCACTTTCAGAGCCAGCAACCAAATCCAGCGTCTGTTACTGCCATGCCACAACCACCTGGCATCCGTCCTCGAGTGCGAGCAAGAAGAGGCCAAGCCACAGACCCCCACAGCATTGCTGAGCGGCTGCGTCGTGAAAGAATCGCTGAAAGAATGAAAGCATTGCAGGAATTAGTTCCCAGCATCAACAAGACTGACAAAGCGGCGATGCTTGATGAAATTGTTGATTATGTGAAGTTCCTTAGGCTCCAAGTTAAGGTCTTGAGCATGAGTAGACTTGGTGGAGCTGGTGCAGTTGCTCAACTTGTAGCTGATGTTCCCGTTTCTGCAGTGGAGGGGGAGGACATAGAAGGTGGAACCAACCAGCAAGCCTGGGCGAAGTGGTCGAACGATGGAACAGAACAACAAGTGGCTAAACTTATGGAGGAAGATGTTGGTGCAGCTATGCAACTTCTTCAATCCAAGGCACTTTGCATAATGCCTATATCTCTAGCATCAGCAATTTTTCGTATGCCTCAATCAGACTCATCAACAATCATCAAGCCTGAATCAAACAACCACACATAG
Protein sequence

>Msa1396770

MAGNCSEGLGDDFFEQILAVPENGVGYGGVLQLGSTPHGGSLRGGGGGGGIMPLGLNLEQNHHGFLRQHQDATRFVDNVVDVEGNITNNNNNHHHLRLHDINNHNNNTNNITSSPSSTPGITDRDSMQMRGLFSTFGQLHTPTHAQPVRPMLQSQPPQPQLHLHHQHQQHFQSQQPNPASVTAMPQPPGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDKAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPVSAVEGEDIEGGTNQQAWAKWSNDGTEQQVAKLMEEDVGAAMQLLQSKALCIMPISLASAIFRMPQSDSSTIIKPESNNHT*