AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0265660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0265660 MtrunA17_Chr2g0330651 98.592 355 5 0 122 476 206 560 0.0 733
Msa0265660 MtrunA17_Chr2g0330651 84.559 136 15 1 1 130 1 136 7.19e-66 221
Msa0265660 MtrunA17_Chr4g0029231 27.798 277 157 6 152 389 359 631 1.90e-15 79.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0265660 AT3G21300.1 78.814 354 73 1 122 475 202 553 0.0 576
Msa0265660 AT3G21300.1 65.854 82 23 2 56 133 54 134 4.85e-27 114
Msa0265660 AT2G28450.2 30.769 221 111 6 194 374 392 610 2.01e-18 89.0
Msa0265660 AT2G28450.1 30.769 221 111 6 194 374 392 610 2.05e-18 89.0

Find 186 sgRNAs with CRISPR-Local

Find 465 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAGTGTAAAGCATGTTTA+TGG 0.151368 2_2:-66015100 Msa0265660:intron
GGTGTTAGGGTTTGGGGTTT+TGG 0.151935 2_2:+66019015 None:intergenic
TCAAGTTCCTCTTAAATCTT+AGG 0.161824 2_2:-66014463 Msa0265660:CDS
AATAAAATTGATGGAAATTT+CGG 0.162241 2_2:-66014986 Msa0265660:CDS
AGAAAGAGTTTGCTGATATT+TGG 0.173639 2_2:+66015455 None:intergenic
AATTGGAGGTGTTAGGGTTT+GGG 0.184627 2_2:+66019008 None:intergenic
TGGAATGCTGCATCTATATT+TGG 0.184814 2_2:-66012773 Msa0265660:three_prime_UTR
ATCTCATTCTCAGTGAAAAT+TGG 0.187514 2_2:+66013022 None:intergenic
AAACCTGACATTGTTATTTC+AGG 0.189166 2_2:-66014950 Msa0265660:intron
GTTGGTTCTGGTTGTGGTTC+GGG 0.205534 2_2:+66019055 None:intergenic
TCTTTAGGCAACCATTTATA+TGG 0.207383 2_2:+66017728 None:intergenic
TCTCATTTGGTCCATATAAA+TGG 0.212001 2_2:-66017739 Msa0265660:CDS
TGGGTCTTCAAGTTGATAAA+TGG 0.238426 2_2:-66013554 Msa0265660:three_prime_UTR
TCGAGGGTTTGGCCGCGTTT+AGG 0.242935 2_2:+66018977 None:intergenic
TACTAGATATAGGTCAAAAT+TGG 0.249301 2_2:-66013574 Msa0265660:three_prime_UTR
CGACTTAATGCCAAGCTAAA+TGG 0.256646 2_2:-66015043 Msa0265660:CDS
ATAAAATTGATGGAAATTTC+GGG 0.260144 2_2:-66014985 Msa0265660:CDS
TATCGAGTGTGTTTGCCTTC+TGG 0.262006 2_2:-66014211 Msa0265660:CDS
ACAAACTGATCCTGCTAATA+AGG 0.268322 2_2:-66017600 Msa0265660:intron
GAAGTTGTGGTGGTTGGTTC+TGG 0.271287 2_2:+66019043 None:intergenic
CTTTGTTTAGCATACAAGTT+AGG 0.286095 2_2:+66012946 None:intergenic
ATCTAAACCTTTACATTTCA+AGG 0.297079 2_2:-66014168 Msa0265660:intron
GCACTTGGATTGCATGTTCC+TGG 0.301094 2_2:-66017662 Msa0265660:CDS
GGTTGGTTCTGGTTGTGGTT+CGG 0.306125 2_2:+66019054 None:intergenic
CGAGGGTTTGGCCGCGTTTA+GGG 0.308019 2_2:+66018978 None:intergenic
TTGGCCGCGTTTAGGGAAAT+AGG 0.315601 2_2:+66018985 None:intergenic
GAATTGGAGGTGTTAGGGTT+TGG 0.315723 2_2:+66019007 None:intergenic
ATCAGCTTCATGTGCATCCC+TGG 0.321719 2_2:+66014485 None:intergenic
CTTTCGTGCAGCGACTCTTT+AGG 0.323603 2_2:+66017713 None:intergenic
CGCAGAGTAGTTCGAGGGTT+TGG 0.329817 2_2:+66018966 None:intergenic
AAAGTTTCTTTCTGTATAGA+TGG 0.330216 2_2:-66012823 Msa0265660:three_prime_UTR
ATGTACATATTAAGTCATTA+AGG 0.333177 2_2:-66012861 Msa0265660:three_prime_UTR
AATAGGAATTGGAGGTGTTA+GGG 0.340379 2_2:+66019002 None:intergenic
CTTCCCGGTGAACGTTTCAT+TGG 0.345606 2_2:-66018869 Msa0265660:CDS
AAATAGGAATTGGAGGTGTT+AGG 0.347221 2_2:+66019001 None:intergenic
GAAATAACAATGTCAGGTTT+AGG 0.350429 2_2:+66014953 None:intergenic
GTGTAGATGGAATTCTCATT+TGG 0.359119 2_2:-66017752 Msa0265660:intron
GGAGTGGGAGTGTGTTTGTT+AGG 0.369822 2_2:+66019149 None:intergenic
CTTTCAAACAAATACTCATC+AGG 0.380438 2_2:-66015434 Msa0265660:intron
ATGAATAATGTTCACTCATA+TGG 0.381599 2_2:+66013204 None:intergenic
ATTGGAGGTGTTAGGGTTTG+GGG 0.387688 2_2:+66019009 None:intergenic
TACTAGGACCTTCAGCAAAT+CGG 0.389943 2_2:+66016550 None:intergenic
AGTAAATAGTAATCCGCATT+TGG 0.394240 2_2:+66013332 None:intergenic
ACTTAAGTACCAACCACTTC+GGG 0.397718 2_2:+66016509 None:intergenic
CTTCAGCAAATCGGGCTTGT+AGG 0.401351 2_2:+66016559 None:intergenic
CATGTGCATCCCTGGGCGGT+TGG 0.403322 2_2:+66014493 None:intergenic
GGGGATCTTAATAAAATTGA+TGG 0.405003 2_2:-66014995 Msa0265660:CDS
CTGTTGGTAACACATCTGTT+GGG 0.409302 2_2:-66015540 Msa0265660:CDS
TTGGAATGTAAGCCCTCTTA+AGG 0.412540 2_2:+66015474 None:intergenic
GGAATGCTGCATCTATATTT+GGG 0.414205 2_2:-66012772 Msa0265660:three_prime_UTR
TGTATAGATGGATCCATGTT+TGG 0.416940 2_2:-66012811 Msa0265660:three_prime_UTR
GTAAGAGTCATGTCTGCTTC+CGG 0.417255 2_2:+66012979 None:intergenic
GGGTCTTCAAGTTGATAAAT+GGG 0.425649 2_2:-66013553 Msa0265660:three_prime_UTR
GCGTTTAGGGAAATAGGAAT+TGG 0.426518 2_2:+66018991 None:intergenic
ATGTGCATCCCTGGGCGGTT+GGG 0.427113 2_2:+66014494 None:intergenic
TTCCCGGTGAACGTTTCATT+GGG 0.427762 2_2:-66018868 Msa0265660:CDS
AGCATTACAGAGACCTTAAG+AGG 0.427859 2_2:-66015487 Msa0265660:CDS
TGGTGCCTGTTCCACAAAAC+AGG 0.428574 2_2:+66015227 None:intergenic
ATGTGTGACCGTGCACTTCC+CGG 0.431326 2_2:-66018884 Msa0265660:CDS
AGCAAAACGGTGAGAGGGAG+AGG 0.432701 2_2:+66019102 None:intergenic
TTAAGTGCTGCTGTCATGCC+GGG 0.438590 2_2:-66013113 Msa0265660:three_prime_UTR
TTTGTTTAGCATACAAGTTA+GGG 0.441945 2_2:+66012947 None:intergenic
TTCTGGTTGTGGTTCGGGGA+GGG 0.444485 2_2:+66019060 None:intergenic
ATTTAGCTTGGCATTAAGTC+GGG 0.446515 2_2:+66015045 None:intergenic
TCCATGTTTGGTAGAAGAGC+TGG 0.447011 2_2:-66012799 Msa0265660:three_prime_UTR
CAAGTTCCTCTTAAATCTTA+GGG 0.452080 2_2:-66014462 Msa0265660:CDS
ACTAGGACCTTCAGCAAATC+GGG 0.455837 2_2:+66016551 None:intergenic
CTATTTATGCAGAGCTCTCA+AGG 0.455970 2_2:-66013375 Msa0265660:intron
GACTTAATATGTACATATCC+TGG 0.456520 2_2:+66012868 None:intergenic
TAGGCAGAGCTGAATATAGA+AGG 0.458506 2_2:-66014288 Msa0265660:CDS
ACAAGCTTGGTACTAGATAT+AGG 0.461879 2_2:-66013584 Msa0265660:three_prime_UTR
TCACTGAGAATGAGATCAAA+GGG 0.462080 2_2:-66013015 Msa0265660:three_prime_UTR
TAGGTCTGACACTTGCAAAA+AGG 0.462822 2_2:-66015204 Msa0265660:intron
ACAAAATGCAACATTTATTG+AGG 0.464324 2_2:-66015017 Msa0265660:CDS
TGTACATATTAAGTCATTAA+GGG 0.468879 2_2:-66012860 Msa0265660:three_prime_UTR
GTCACACATGACGACAAAAC+CGG 0.469567 2_2:+66018898 None:intergenic
CTATGCAAAGTTACTGATAC+CGG 0.471685 2_2:-66018917 Msa0265660:CDS
GATTCTTGCTTAATTGAAGA+AGG 0.472098 2_2:-66013262 Msa0265660:three_prime_UTR
ATTAAGTGCTGCTGTCATGC+CGG 0.472823 2_2:-66013114 Msa0265660:three_prime_UTR
TTTGTGTGAATGAACATTGT+AGG 0.475932 2_2:+66017389 None:intergenic
TGCATGAAACTTCAGATGCT+TGG 0.479565 2_2:-66013227 Msa0265660:three_prime_UTR
TGTTCTAGGGATGTAATGAC+TGG 0.481380 2_2:-66016617 Msa0265660:intron
GTGGTGGTTGGTTCTGGTTG+TGG 0.481772 2_2:+66019049 None:intergenic
ACTAGATATAGGTCAAAATT+GGG 0.484678 2_2:-66013573 Msa0265660:three_prime_UTR
GAATTACGCGGAGGCTACTA+AGG 0.485129 2_2:-66018825 Msa0265660:intron
TTTGGTAGAAGAGCTGGGTC+TGG 0.486254 2_2:-66012793 Msa0265660:three_prime_UTR
CACGAAAGAAATGTTGATGC+TGG 0.489316 2_2:-66017698 Msa0265660:CDS
GGAATTGAAGTTGTGGTGGT+TGG 0.489461 2_2:+66019037 None:intergenic
TGCTTAATTGAAGAAGGTTG+AGG 0.490284 2_2:-66013256 Msa0265660:three_prime_UTR
CATTTAGCTTGGCATTAAGT+CGG 0.491991 2_2:+66015044 None:intergenic
CAAAATGCAACATTTATTGA+GGG 0.494797 2_2:-66015016 Msa0265660:CDS
TCTGTTGGTAACACATCTGT+TGG 0.496204 2_2:-66015541 Msa0265660:CDS
ATGCAGAAACTTTATCTACT+AGG 0.496736 2_2:+66016534 None:intergenic
TGCCCAACCTTGAAATGTAA+AGG 0.498686 2_2:+66014161 None:intergenic
GAACCTGAAATAACAATGTC+AGG 0.501451 2_2:+66014947 None:intergenic
AAACGGTGAGAGGGAGAGGA+TGG 0.504252 2_2:+66019106 None:intergenic
ACATTGCATACCTTATTAGC+AGG 0.505849 2_2:+66017590 None:intergenic
CCGGTGAACGTTTCATTGGG+AGG 0.509228 2_2:-66018865 Msa0265660:CDS
AGGTCACGTGCACATGTAGC+AGG 0.511360 2_2:+66014410 None:intergenic
ACCTTTGCCTTTAAAAGCGA+GGG 0.514290 2_2:+66018940 None:intergenic
TTTGGGAATTGAAGTTGTGG+TGG 0.514781 2_2:+66019033 None:intergenic
TAACACATCTGTTGGGGAGG+AGG 0.517341 2_2:-66015533 Msa0265660:CDS
TGGGAGGATTACTCGAAAGA+AGG 0.521125 2_2:-66018849 Msa0265660:CDS
AATAATGTAAATACTTCTGT+TGG 0.525332 2_2:-66015556 Msa0265660:CDS
CCCAGCTCTTCTACCAAACA+TGG 0.525509 2_2:+66012798 None:intergenic
CGGGCATCTGCGATGGCTTG+AGG 0.525665 2_2:+66015064 None:intergenic
TTGCGGCTATACAAGAATGT+TGG 0.526698 2_2:-66017437 Msa0265660:CDS
GACCTTTGCCTTTAAAAGCG+AGG 0.526847 2_2:+66018939 None:intergenic
GGGAGGATTACTCGAAAGAA+GGG 0.529171 2_2:-66018848 Msa0265660:CDS
CCTCCCAATGAAACGTTCAC+CGG 0.530155 2_2:+66018865 None:intergenic
TGTTGGAGAGACCCACAACT+TGG 0.532486 2_2:-66017420 Msa0265660:CDS
CTTTCAGGAGATAACAAGCT+TGG 0.532626 2_2:-66013597 Msa0265660:intron
AGTTTCTGCATTTCCCGAAG+TGG 0.533202 2_2:-66016522 Msa0265660:intron
AACTTAAGTACCAACCACTT+CGG 0.533340 2_2:+66016508 None:intergenic
TATGCAGAGCTCTCAAGGGT+TGG 0.534731 2_2:-66013370 Msa0265660:intron
AATACAGATCCCAACCGCCC+AGG 0.534815 2_2:-66014503 Msa0265660:intron
GGGAGTGAAAATTATGCACT+TGG 0.538441 2_2:-66017677 Msa0265660:CDS
TTGGTTCTGGTTGTGGTTCG+GGG 0.541358 2_2:+66019056 None:intergenic
GAGGAGGAATACACTTTGCA+TGG 0.544319 2_2:-66015517 Msa0265660:CDS
TGTTGGTAACACATCTGTTG+GGG 0.546344 2_2:-66015539 Msa0265660:CDS
GTGTGTGGGAACATGTCAAC+TGG 0.546603 2_2:+66014240 None:intergenic
TTCACTGAGAATGAGATCAA+AGG 0.546612 2_2:-66013016 Msa0265660:three_prime_UTR
ACAAAGTTGACCATTACTTC+AGG 0.548753 2_2:+66016590 None:intergenic
ATACAGATCCCAACCGCCCA+GGG 0.549026 2_2:-66014502 Msa0265660:intron
CTCCCAATGAAACGTTCACC+GGG 0.549681 2_2:+66018866 None:intergenic
AGGCAAACACACTCGATATG+AGG 0.553725 2_2:+66014216 None:intergenic
GTTCTGGTTGTGGTTCGGGG+AGG 0.555312 2_2:+66019059 None:intergenic
GCACATGCTTTCACGCTGCA+AGG 0.555937 2_2:-66013527 Msa0265660:intron
CTACAAGCCCGATTTGCTGA+AGG 0.558205 2_2:-66016558 Msa0265660:CDS
GGATATGATCTACTTCATGA+TGG 0.558357 2_2:+66013296 None:intergenic
GACTGGTCTGCCTGAAGTAA+TGG 0.558686 2_2:-66016600 Msa0265660:CDS
AGGGTGAGAAACCAAGTTGT+GGG 0.558865 2_2:+66017409 None:intergenic
AAAGGGGTACTAGCTCAAAC+CGG 0.559385 2_2:-66012998 Msa0265660:three_prime_UTR
AGAGAGAGCAAAACGGTGAG+AGG 0.560069 2_2:+66019096 None:intergenic
GAGAGAGCAAAACGGTGAGA+GGG 0.560392 2_2:+66019097 None:intergenic
AATAGTAATCCGCATTTGGA+AGG 0.560722 2_2:+66013336 None:intergenic
TGTGCTGGCATCAGAGGAGA+TGG 0.560798 2_2:-66015268 Msa0265660:CDS
GAGGCGCCCTAAGATTTAAG+AGG 0.561291 2_2:+66014456 None:intergenic
TTGTGTGAATGAACATTGTA+GGG 0.564703 2_2:+66017390 None:intergenic
ATTAAGTCGGGCATCTGCGA+TGG 0.565964 2_2:+66015057 None:intergenic
GTACATATTAAGTCATTAAG+GGG 0.568642 2_2:-66012859 Msa0265660:three_prime_UTR
TTTAGGGAAATAGGAATTGG+AGG 0.569455 2_2:+66018994 None:intergenic
GAAGAATGTGCTGGCATCAG+AGG 0.571478 2_2:-66015274 Msa0265660:CDS
TCAGCTTCATGTGCATCCCT+GGG 0.572316 2_2:+66014486 None:intergenic
AAGCATTTGATGCTGAGAAG+TGG 0.572814 2_2:-66017357 Msa0265660:CDS
AAACTCATCGAAGAATGTGC+TGG 0.574226 2_2:-66015283 Msa0265660:CDS
CAAATCGGGCTTGTAGGAAG+AGG 0.574944 2_2:+66016565 None:intergenic
CACTCGATATGAGGTGTGTG+TGG 0.575250 2_2:+66014225 None:intergenic
CCATGTTTGGTAGAAGAGCT+GGG 0.576071 2_2:-66012798 Msa0265660:three_prime_UTR
AACGGTGAGAGGGAGAGGAT+GGG 0.581626 2_2:+66019107 None:intergenic
AGCAAGAATCTGACAAGTGT+AGG 0.587549 2_2:+66013275 None:intergenic
GGAACATGTCAACTGGCTGT+AGG 0.591918 2_2:+66014247 None:intergenic
GACCTTGATTATCTCTGTCA+TGG 0.592498 2_2:-66014392 Msa0265660:CDS
TAGTTCTTACCTTCCAAATG+CGG 0.596691 2_2:-66013345 Msa0265660:three_prime_UTR
TAGGGTGAGAAACCAAGTTG+TGG 0.599583 2_2:+66017408 None:intergenic
AAATGCAACATTTATTGAGG+GGG 0.600230 2_2:-66015014 Msa0265660:CDS
TGATTATCTCTGTCATGGTG+TGG 0.603583 2_2:-66014387 Msa0265660:intron
GGGATTCGCAGAGTAGTTCG+AGG 0.603852 2_2:+66018960 None:intergenic
AGAGAGTAGAGAGAGCAAAA+CGG 0.604713 2_2:+66019089 None:intergenic
AACATCTGAACAGGTTCTTG+CGG 0.610504 2_2:-66017454 Msa0265660:intron
AACGTTCACCGGGAAGTGCA+CGG 0.619488 2_2:+66018876 None:intergenic
CAGATCAACAAAGCTCCAGA+AGG 0.620050 2_2:+66014196 None:intergenic
TATTTATGCAGAGCTCTCAA+GGG 0.620100 2_2:-66013374 Msa0265660:intron
AAAATGCAACATTTATTGAG+GGG 0.623055 2_2:-66015015 Msa0265660:CDS
TACAATGTTCATTCACACAA+AGG 0.623279 2_2:-66017387 Msa0265660:CDS
CACCATGACAGAGATAATCA+AGG 0.625231 2_2:+66014390 None:intergenic
TTGTTTAGCATACAAGTTAG+GGG 0.625787 2_2:+66012948 None:intergenic
CTGTTCCACAAAACAGGTCA+AGG 0.628072 2_2:+66015233 None:intergenic
GGATTCGCAGAGTAGTTCGA+GGG 0.629285 2_2:+66018961 None:intergenic
AGGAGGAATACACTTTGCAT+GGG 0.640766 2_2:-66015516 Msa0265660:CDS
TGGTAACACATCTGTTGGGG+AGG 0.641397 2_2:-66015536 Msa0265660:CDS
GCATTACAGAGACCTTAAGA+GGG 0.644303 2_2:-66015486 Msa0265660:CDS
CATGAAACATACACTATGCG+AGG 0.646643 2_2:+66014437 None:intergenic
ACGAAAGAAATGTTGATGCT+GGG 0.651196 2_2:-66017697 Msa0265660:CDS
ATTTGATGCTGAGAAGTGGA+AGG 0.658726 2_2:-66017353 Msa0265660:intron
TTAATATGTACATATCCTGG+AGG 0.664729 2_2:+66012871 None:intergenic
AATTCCTATTTCCCTAAACG+CGG 0.665097 2_2:-66018989 Msa0265660:CDS
TACATATTAAGTCATTAAGG+GGG 0.669438 2_2:-66012858 Msa0265660:three_prime_UTR
TAATATGTACATATCCTGGA+GGG 0.676060 2_2:+66012872 None:intergenic
GCTTCATGTGCATCCCTGGG+CGG 0.687592 2_2:+66014489 None:intergenic
GGAGGATTACTCGAAAGAAG+GGG 0.687721 2_2:-66018847 Msa0265660:CDS
TAAGTGCTGCTGTCATGCCG+GGG 0.688064 2_2:-66013112 Msa0265660:three_prime_UTR
CACTGAGAATGAGATCAAAG+GGG 0.714159 2_2:-66013014 Msa0265660:three_prime_UTR
ACTCGATATGAGGTGTGTGT+GGG 0.718262 2_2:+66014226 None:intergenic
TCGAAAGAAGGGGAATTACG+CGG 0.719439 2_2:-66018837 Msa0265660:CDS
AAAGAAGGGGAATTACGCGG+AGG 0.735551 2_2:-66018834 Msa0265660:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATATTTAATTTTTGTTCT+AGG - chr2_2:66015310-66015329 Msa0265660:intron 10.0%
!!! AATATTTAATTTTTGTTCTA+GGG - chr2_2:66015311-66015330 Msa0265660:intron 10.0%
!! CAATTTAAGAAATAAAATAT+GGG + chr2_2:66016576-66016595 None:intergenic 10.0%
!! TCAATTTAAGAAATAAAATA+TGG + chr2_2:66016577-66016596 None:intergenic 10.0%
!! AATATATAAATAGAATAAGT+AGG + chr2_2:66017041-66017060 None:intergenic 10.0%
!!! TTTTATTGAAATTTCTTATA+GGG + chr2_2:66018064-66018083 None:intergenic 10.0%
!!! TTTTTATTGAAATTTCTTAT+AGG + chr2_2:66018065-66018084 None:intergenic 10.0%
!!! AACATTATGTAATTTTTAAA+AGG + chr2_2:66018188-66018207 None:intergenic 10.0%
!! TTAAATAATTTATCCAAACA+AGG - chr2_2:66013693-66013712 Msa0265660:intron 15.0%
!! ATTAAACTGTTTATATAAAC+AGG - chr2_2:66013858-66013877 Msa0265660:intron 15.0%
!!! ATAATTTTATCAAAAAAACC+AGG + chr2_2:66014300-66014319 None:intergenic 15.0%
!! ATAACAATATTTCATTTGAA+GGG - chr2_2:66015266-66015285 Msa0265660:CDS 15.0%
!!! TCAAATTTAATTTCTATACA+AGG - chr2_2:66015687-66015706 Msa0265660:intron 15.0%
!!! CTATTAACATTTTAGTTTTA+TGG - chr2_2:66016115-66016134 Msa0265660:intron 15.0%
!! TACAATAATTACATAAAGTT+TGG + chr2_2:66016315-66016334 None:intergenic 15.0%
!! AATAAAATTGATGGAAATTT+CGG - chr2_2:66016955-66016974 Msa0265660:intron 15.0%
!! TAATTAAAATAGAGCAAATA+TGG + chr2_2:66017344-66017363 None:intergenic 15.0%
!! TTTCAGATTTAGATTATATT+TGG - chr2_2:66017878-66017897 Msa0265660:intron 15.0%
!! TTCAGATTTAGATTATATTT+GGG - chr2_2:66017879-66017898 Msa0265660:intron 15.0%
!! AATTAAATGATAATAACAAC+AGG - chr2_2:66018159-66018178 Msa0265660:intron 15.0%
!! TTGAAAACATTTAAAAAAAG+AGG + chr2_2:66018806-66018825 None:intergenic 15.0%
!! GTTTATTTGAGCTTATTTAT+TGG - chr2_2:66013293-66013312 Msa0265660:three_prime_UTR 20.0%
!! CATGGAAAACATATATAAAT+AGG + chr2_2:66013719-66013738 None:intergenic 20.0%
!! NNNNNNNNACAAGGAACAAT+CGG + chr2_2:66013952-66013971 None:intergenic 20.0%
!! ATATGAAATCAAATAAGTGT+AGG + chr2_2:66014423-66014442 None:intergenic 20.0%
!! AAATACTGCTTATAAGTAAT+CGG + chr2_2:66014755-66014774 None:intergenic 20.0%
!!! CTCAAACATTGATTTTAAAT+TGG - chr2_2:66015046-66015065 Msa0265660:CDS 20.0%
!!! ACATTGATTTTAAATTGGTA+TGG - chr2_2:66015051-66015070 Msa0265660:CDS 20.0%
!! CATAACAATATTTCATTTGA+AGG - chr2_2:66015265-66015284 Msa0265660:CDS 20.0%
!! ATTAATACTGATAGAAAACA+AGG + chr2_2:66015294-66015313 None:intergenic 20.0%
!! TAAATTTGATCGTAAAGAAT+GGG + chr2_2:66015676-66015695 None:intergenic 20.0%
!! TTAAATTTGATCGTAAAGAA+TGG + chr2_2:66015677-66015696 None:intergenic 20.0%
!! AATTTCTATACAAGGTTAAA+TGG - chr2_2:66015695-66015714 Msa0265660:intron 20.0%
!! ATTTCTATACAAGGTTAAAT+GGG - chr2_2:66015696-66015715 Msa0265660:intron 20.0%
!!! TAACATTTTAGTTTTATGGA+TGG - chr2_2:66016119-66016138 Msa0265660:intron 20.0%
!!! AACATTTTAGTTTTATGGAT+GGG - chr2_2:66016120-66016139 Msa0265660:intron 20.0%
!! AATAATGTAAATACTTCTGT+TGG - chr2_2:66016385-66016404 Msa0265660:intron 20.0%
!!! TTACAATATGCCAATTTTTT+TGG - chr2_2:66016531-66016550 Msa0265660:CDS 20.0%
!!! TCATTTGGTTTTAGTATATT+AGG - chr2_2:66016773-66016792 Msa0265660:intron 20.0%
!! ATAAAATTGATGGAAATTTC+GGG - chr2_2:66016956-66016975 Msa0265660:intron 20.0%
!! AAATAGAATAAGTAGGAATA+TGG + chr2_2:66017034-66017053 None:intergenic 20.0%
!! TTCGTTATTTATGTCTTTAA+TGG - chr2_2:66017239-66017258 Msa0265660:intron 20.0%
!! TTATTTATGTCTTTAATGGA+GGG - chr2_2:66017243-66017262 Msa0265660:intron 20.0%
!! AAAGAAAAGAAAAGAAAAGT+GGG + chr2_2:66018298-66018317 None:intergenic 20.0%
!! AAAAGAAAAGAAAAGAAAAG+TGG + chr2_2:66018299-66018318 None:intergenic 20.0%
!!! GTGTACAAAATTATTTTGAA+TGG - chr2_2:66018475-66018494 Msa0265660:intron 20.0%
!! ATGTACATATTAAGTCATTA+AGG - chr2_2:66019080-66019099 Msa0265660:CDS 20.0%
!! TGTACATATTAAGTCATTAA+GGG - chr2_2:66019081-66019100 Msa0265660:CDS 20.0%
! GAGTTTATAAAATCAGCTTA+TGG - chr2_2:66013404-66013423 Msa0265660:intron 25.0%
! ATTTGTTTGAGCTTATCTAA+TGG - chr2_2:66013473-66013492 Msa0265660:intron 25.0%
! TTTGTTTGAGCTTATCTAAT+GGG - chr2_2:66013474-66013493 Msa0265660:intron 25.0%
!!! ATATATAAATAGGCCTTGTT+TGG + chr2_2:66013709-66013728 None:intergenic 25.0%
!! TTTGATTTCATATTCACAAC+TGG - chr2_2:66014430-66014449 Msa0265660:CDS 25.0%
! TTGATTTCATATTCACAACT+GGG - chr2_2:66014431-66014450 Msa0265660:CDS 25.0%
!!! GTGGTTTTGTAAGTTTATTT+AGG + chr2_2:66014714-66014733 None:intergenic 25.0%
! GAGTCTATCATATATATGTT+GGG + chr2_2:66014880-66014899 None:intergenic 25.0%
! AGAGTCTATCATATATATGT+TGG + chr2_2:66014881-66014900 None:intergenic 25.0%
!!! GTATGGAGTTTATTTTAACT+CGG - chr2_2:66015068-66015087 Msa0265660:CDS 25.0%
!!! TATGGAGTTTATTTTAACTC+GGG - chr2_2:66015069-66015088 Msa0265660:CDS 25.0%
!! CATATTTTATGAAGTTTCGT+TGG + chr2_2:66015198-66015217 None:intergenic 25.0%
!!! TTTGAATTTGATGCTTTTTC+AGG + chr2_2:66015238-66015257 None:intergenic 25.0%
!!! TGAAAAAGCATCAAATTCAA+AGG - chr2_2:66015237-66015256 Msa0265660:CDS 25.0%
!!! GAAAAAGCATCAAATTCAAA+GGG - chr2_2:66015238-66015257 Msa0265660:CDS 25.0%
!!! AAAAAGCATCAAATTCAAAG+GGG - chr2_2:66015239-66015258 Msa0265660:CDS 25.0%
! AACAGAAATTACAGGTTTAA+GGG + chr2_2:66015532-66015551 None:intergenic 25.0%
! AAACAGAAATTACAGGTTTA+AGG + chr2_2:66015533-66015552 None:intergenic 25.0%
! CAAATAGACAGATATTGTTA+AGG + chr2_2:66015836-66015855 None:intergenic 25.0%
!!! AGGATATACTTTGAAATCTA+CGG + chr2_2:66015865-66015884 None:intergenic 25.0%
! TAGATTTCAAAGTATATCCT+GGG - chr2_2:66015865-66015884 Msa0265660:intron 25.0%
!! CCTTAAAATTTGAAATCTGA+GGG + chr2_2:66015931-66015950 None:intergenic 25.0%
!! ACCTTAAAATTTGAAATCTG+AGG + chr2_2:66015932-66015951 None:intergenic 25.0%
!!! TCAAATTTTAAGGTATACCA+AGG - chr2_2:66015938-66015957 Msa0265660:intron 25.0%
!!! CAAATTTTAAGGTATACCAA+GGG - chr2_2:66015939-66015958 Msa0265660:intron 25.0%
!!! AAATTTTAAGGTATACCAAG+GGG - chr2_2:66015940-66015959 Msa0265660:intron 25.0%
! ATGAGATCTCTTACATAATA+AGG + chr2_2:66016087-66016106 None:intergenic 25.0%
! AGTTTGGAAACAAGTTAAAA+AGG + chr2_2:66016299-66016318 None:intergenic 25.0%
! TAAGAAATAAAATATGGGAC+AGG + chr2_2:66016571-66016590 None:intergenic 25.0%
! ACAAAATGCAACATTTATTG+AGG - chr2_2:66016924-66016943 Msa0265660:intron 25.0%
! CAAAATGCAACATTTATTGA+GGG - chr2_2:66016925-66016944 Msa0265660:intron 25.0%
! AAAATGCAACATTTATTGAG+GGG - chr2_2:66016926-66016945 Msa0265660:intron 25.0%
!! AACATTCAAATAAATGGGTT+GGG + chr2_2:66017168-66017187 None:intergenic 25.0%
! TAACATTCAAATAAATGGGT+TGG + chr2_2:66017169-66017188 None:intergenic 25.0%
! CAGCTAACATTCAAATAAAT+GGG + chr2_2:66017173-66017192 None:intergenic 25.0%
! TCAGCTAACATTCAAATAAA+TGG + chr2_2:66017174-66017193 None:intergenic 25.0%
! GTTATTTATGTCTTTAATGG+AGG - chr2_2:66017242-66017261 Msa0265660:intron 25.0%
!! CAAATATGGTTTTCTTTACA+TGG + chr2_2:66017330-66017349 None:intergenic 25.0%
! ACATGTTTAATTGTGTACTT+CGG + chr2_2:66017401-66017420 None:intergenic 25.0%
! CAATTAAACATGTTGTCATT+TGG - chr2_2:66017408-66017427 Msa0265660:CDS 25.0%
! ATCTAAACCTTTACATTTCA+AGG - chr2_2:66017773-66017792 Msa0265660:intron 25.0%
! GAAATGCTATGATAATTGAT+TGG + chr2_2:66017911-66017930 None:intergenic 25.0%
!! TGGATTTATTCTTTTCAACA+GGG - chr2_2:66018016-66018035 Msa0265660:intron 25.0%
! TACTAGATATAGGTCAAAAT+TGG - chr2_2:66018367-66018386 Msa0265660:intron 25.0%
! ACTAGATATAGGTCAAAATT+GGG - chr2_2:66018368-66018387 Msa0265660:intron 25.0%
!! TAGTAGAAACTTTAGAAAGT+TGG + chr2_2:66018542-66018561 None:intergenic 25.0%
! ATGAATAATGTTCACTCATA+TGG + chr2_2:66018740-66018759 None:intergenic 25.0%
!!! TATTGTTTATTTTCTAACCC+CGG + chr2_2:66018849-66018868 None:intergenic 25.0%
! TTTGTTTAGCATACAAGTTA+GGG + chr2_2:66018997-66019016 None:intergenic 25.0%
! GTACATATTAAGTCATTAAG+GGG - chr2_2:66019082-66019101 Msa0265660:CDS 25.0%
! TACATATTAAGTCATTAAGG+GGG - chr2_2:66019083-66019102 Msa0265660:CDS 25.0%
! AAAGTTTCTTTCTGTATAGA+TGG - chr2_2:66019118-66019137 Msa0265660:CDS 25.0%
! GGAATTTGAATTTTCGGAAA+TGG + chr2_2:66012816-66012835 None:intergenic 30.0%
! AGGATGGGAATTTGAATTTT+CGG + chr2_2:66012822-66012841 None:intergenic 30.0%
TATCTGCATAAACACTTCTA+AGG - chr2_2:66013371-66013390 Msa0265660:intron 30.0%
AAGCTATCTTGGAAAACTTA+AGG + chr2_2:66013562-66013581 None:intergenic 30.0%
!! GTTGTTTTCATAAGCTATCT+TGG + chr2_2:66013573-66013592 None:intergenic 30.0%
! CTTGTTATCATAAGCTATCA+TGG + chr2_2:66013737-66013756 None:intergenic 30.0%
!! CCTTGTTTCTATAATGAAAC+TGG + chr2_2:66014072-66014091 None:intergenic 30.0%
CCAGTTTCATTATAGAAACA+AGG - chr2_2:66014069-66014088 Msa0265660:intron 30.0%
TGTTTACTTTCTTGTGTAGA+TGG - chr2_2:66014176-66014195 Msa0265660:three_prime_UTR 30.0%
TCTCATTTGGTCCATATAAA+TGG - chr2_2:66014202-66014221 Msa0265660:CDS 30.0%
TCTTTAGGCAACCATTTATA+TGG + chr2_2:66014216-66014235 None:intergenic 30.0%
GATGTTCAAGACAAAACATA+AGG + chr2_2:66014473-66014492 None:intergenic 30.0%
TTGTGTGAATGAACATTGTA+GGG + chr2_2:66014554-66014573 None:intergenic 30.0%
TTTGTGTGAATGAACATTGT+AGG + chr2_2:66014555-66014574 None:intergenic 30.0%
TACAATGTTCATTCACACAA+AGG - chr2_2:66014554-66014573 Msa0265660:intron 30.0%
!! TTCCTTGTCTTACTTGTTTT+GGG - chr2_2:66014631-66014650 Msa0265660:intron 30.0%
ACTTACAAAACCACCTTATA+AGG - chr2_2:66014720-66014739 Msa0265660:intron 30.0%
GTTTGAATAGTGATAGTAAG+TGG + chr2_2:66014985-66015004 None:intergenic 30.0%
TATGAAGTTTCGTTGGAATT+TGG + chr2_2:66015191-66015210 None:intergenic 30.0%
ATGCAGAAACTTTATCTACT+AGG + chr2_2:66015410-66015429 None:intergenic 30.0%
ACAGAAATTACAGGTTTAAG+GGG + chr2_2:66015531-66015550 None:intergenic 30.0%
TCAACAGAAACAGAAATTAC+AGG + chr2_2:66015540-66015559 None:intergenic 30.0%
!! GTAATTTCTGTTTCTGTTGA+AGG - chr2_2:66015540-66015559 Msa0265660:CDS 30.0%
TAAAAGCTTAAGATGTTACG+AGG + chr2_2:66015802-66015821 None:intergenic 30.0%
! TCGTAACATCTTAAGCTTTT+AGG - chr2_2:66015801-66015820 Msa0265660:intron 30.0%
!!! TCTTAAGCTTTTAGGATAGT+TGG - chr2_2:66015809-66015828 Msa0265660:intron 30.0%
!! GGATATACTTTGAAATCTAC+GGG + chr2_2:66015864-66015883 None:intergenic 30.0%
GTAGATTTCAAAGTATATCC+TGG - chr2_2:66015864-66015883 Msa0265660:intron 30.0%
TCAATCAAACTAACAGATTC+GGG + chr2_2:66015908-66015927 None:intergenic 30.0%
GTCAATCAAACTAACAGATT+CGG + chr2_2:66015909-66015928 None:intergenic 30.0%
! CCCTCAGATTTCAAATTTTA+AGG - chr2_2:66015928-66015947 Msa0265660:intron 30.0%
TAACATCCCACTTCTAAATA+GGG - chr2_2:66015973-66015992 Msa0265660:intron 30.0%
AATAAAGTGACAACGTATGA+GGG + chr2_2:66016230-66016249 None:intergenic 30.0%
!! AGAAAGAGTTTGCTGATATT+TGG + chr2_2:66016489-66016508 None:intergenic 30.0%
CTTTCAAACAAATACTCATC+AGG - chr2_2:66016507-66016526 Msa0265660:intron 30.0%
AAAGACAGAGCCAAAAAAAT+TGG + chr2_2:66016544-66016563 None:intergenic 30.0%
! TGCTTACATTTCTTTTCTGA+TGG + chr2_2:66016607-66016626 None:intergenic 30.0%
! TAAGCAAGATTTTCCCTATT+AGG - chr2_2:66016621-66016640 Msa0265660:intron 30.0%
TACAAAACTTCTGCCTAATA+GGG + chr2_2:66016637-66016656 None:intergenic 30.0%
ATACAAAACTTCTGCCTAAT+AGG + chr2_2:66016638-66016657 None:intergenic 30.0%
TGCTTTACACTGTTCAAAAT+TGG + chr2_2:66016835-66016854 None:intergenic 30.0%
AACAGTGTAAAGCATGTTTA+TGG - chr2_2:66016841-66016860 Msa0265660:intron 30.0%
!! ATTTTGTATGCCATTTAGCT+TGG + chr2_2:66016911-66016930 None:intergenic 30.0%
AAATGCAACATTTATTGAGG+GGG - chr2_2:66016927-66016946 Msa0265660:intron 30.0%
GGGGATCTTAATAAAATTGA+TGG - chr2_2:66016946-66016965 Msa0265660:intron 30.0%
GAAATAACAATGTCAGGTTT+AGG + chr2_2:66016991-66017010 None:intergenic 30.0%
!! AAACCTGACATTGTTATTTC+AGG - chr2_2:66016991-66017010 Msa0265660:intron 30.0%
AAGTAGGAATATGGAAATGT+AGG + chr2_2:66017025-66017044 None:intergenic 30.0%
CAATGGCAATTTCAACAATT+AGG + chr2_2:66017124-66017143 None:intergenic 30.0%
TCAAGTTCCTCTTAAATCTT+AGG - chr2_2:66017478-66017497 Msa0265660:intron 30.0%
CAAGTTCCTCTTAAATCTTA+GGG - chr2_2:66017479-66017498 Msa0265660:intron 30.0%
AAACCTTTACATTTCAAGGT+TGG - chr2_2:66017777-66017796 Msa0265660:intron 30.0%
AACCTTTACATTTCAAGGTT+GGG - chr2_2:66017778-66017797 Msa0265660:intron 30.0%
ATGTAGCAAAAGAAATGAGA+TGG + chr2_2:66017806-66017825 None:intergenic 30.0%
! TCATTTCTTTTGCTACATCT+GGG - chr2_2:66017808-66017827 Msa0265660:intron 30.0%
! TTGGATGTCTGATGAATTTT+GGG - chr2_2:66017851-66017870 Msa0265660:intron 30.0%
ATGTGAAGTGCAATAATCAA+TGG - chr2_2:66017981-66018000 Msa0265660:intron 30.0%
! CTGGATTTATTCTTTTCAAC+AGG - chr2_2:66018015-66018034 Msa0265660:intron 30.0%
TGAGAATTGTATAATCATGC+TGG + chr2_2:66018124-66018143 None:intergenic 30.0%
! TACACTGATGCAATAGTTTT+GGG + chr2_2:66018460-66018479 None:intergenic 30.0%
! ATTTTGAATGGTAGTAGCAT+TGG - chr2_2:66018487-66018506 Msa0265660:intron 30.0%
AGTAAATAGTAATCCGCATT+TGG + chr2_2:66018612-66018631 None:intergenic 30.0%
GATTCTTGCTTAATTGAAGA+AGG - chr2_2:66018679-66018698 Msa0265660:intron 30.0%
ATCTCATTCTCAGTGAAAAT+TGG + chr2_2:66018922-66018941 None:intergenic 30.0%
TTGTTTAGCATACAAGTTAG+GGG + chr2_2:66018996-66019015 None:intergenic 30.0%
! CTTTGTTTAGCATACAAGTT+AGG + chr2_2:66018998-66019017 None:intergenic 30.0%
TAATATGTACATATCCTGGA+GGG + chr2_2:66019072-66019091 None:intergenic 30.0%
TTAATATGTACATATCCTGG+AGG + chr2_2:66019073-66019092 None:intergenic 30.0%
GACTTAATATGTACATATCC+TGG + chr2_2:66019076-66019095 None:intergenic 30.0%
! TGAATTTTCGGAAATGGAGT+GGG + chr2_2:66012810-66012829 None:intergenic 35.0%
! TTGAATTTTCGGAAATGGAG+TGG + chr2_2:66012811-66012830 None:intergenic 35.0%
!! AATAGGAATTGGAGGTGTTA+GGG + chr2_2:66012942-66012961 None:intergenic 35.0%
!! AAATAGGAATTGGAGGTGTT+AGG + chr2_2:66012943-66012962 None:intergenic 35.0%
TTTAGGGAAATAGGAATTGG+AGG + chr2_2:66012950-66012969 None:intergenic 35.0%
AATTCCTATTTCCCTAAACG+CGG - chr2_2:66012952-66012971 Msa0265660:three_prime_UTR 35.0%
CTATGCAAAGTTACTGATAC+CGG - chr2_2:66013024-66013043 Msa0265660:three_prime_UTR 35.0%
GATTAAAGCTAAAGAGGAAC+AGG - chr2_2:66013239-66013258 Msa0265660:three_prime_UTR 35.0%
TTTCAGCTTATGGGTCTATT+TGG - chr2_2:66013446-66013465 Msa0265660:intron 35.0%
TAAGTGTTTGTGACACTGTT+TGG - chr2_2:66013497-66013516 Msa0265660:intron 35.0%
! AAGGTTTTCTCAGAAAGACT+TGG - chr2_2:66013906-66013925 Msa0265660:intron 35.0%
CAGAAAGACTTGGAATTGAA+TGG - chr2_2:66013916-66013935 Msa0265660:intron 35.0%
! TCTCATGCAAATGCATCTTT+TGG - chr2_2:66014128-66014147 Msa0265660:intron 35.0%
GTGTAGATGGAATTCTCATT+TGG - chr2_2:66014189-66014208 Msa0265660:exon 35.0%
ACGAAAGAAATGTTGATGCT+GGG - chr2_2:66014244-66014263 Msa0265660:CDS 35.0%
ACAAACTGATCCTGCTAATA+AGG - chr2_2:66014341-66014360 Msa0265660:intron 35.0%
ACATTGCATACCTTATTAGC+AGG + chr2_2:66014354-66014373 None:intergenic 35.0%
ATTTCATATTCACAACTGGG+AGG - chr2_2:66014434-66014453 Msa0265660:CDS 35.0%
TTTGTCTTGAACATCTGAAC+AGG - chr2_2:66014478-66014497 Msa0265660:CDS 35.0%
! GTTCCTTGTCTTACTTGTTT+TGG - chr2_2:66014630-66014649 Msa0265660:intron 35.0%
TACCCAAAACAAGTAAGACA+AGG + chr2_2:66014636-66014655 None:intergenic 35.0%
!!! TCTTACTTGTTTTGGGTACA+TGG - chr2_2:66014638-66014657 Msa0265660:intron 35.0%
AGTTCTTGCATCTATATTCG+TGG - chr2_2:66014668-66014687 Msa0265660:intron 35.0%
TATTCGTGGACCATAGAATT+TGG - chr2_2:66014682-66014701 Msa0265660:intron 35.0%
ATTCGTGGACCATAGAATTT+GGG - chr2_2:66014683-66014702 Msa0265660:intron 35.0%
TACAAAACCACCTTATAAGG+TGG - chr2_2:66014723-66014742 Msa0265660:intron 35.0%
ACAAAACCACCTTATAAGGT+GGG - chr2_2:66014724-66014743 Msa0265660:intron 35.0%
GAATAGTGATAGTAAGTGGT+GGG + chr2_2:66014981-66015000 None:intergenic 35.0%
TGAATAGTGATAGTAAGTGG+TGG + chr2_2:66014982-66015001 None:intergenic 35.0%
AACCATATCACTATGCAATG+TGG - chr2_2:66015002-66015021 Msa0265660:CDS 35.0%
ACCATATCACTATGCAATGT+GGG - chr2_2:66015003-66015022 Msa0265660:CDS 35.0%
! ATCAATGTTTGAGCCTTATC+CGG + chr2_2:66015039-66015058 None:intergenic 35.0%
!!! GTTTATTTTAACTCGGGCAA+AGG - chr2_2:66015075-66015094 Msa0265660:CDS 35.0%
ACAAAGTTGACCATTACTTC+AGG + chr2_2:66015354-66015373 None:intergenic 35.0%
AACTTAAGTACCAACCACTT+CGG + chr2_2:66015436-66015455 None:intergenic 35.0%
TTAAGGGGTTTCGAAAGTTA+AGG + chr2_2:66015516-66015535 None:intergenic 35.0%
!! AGCTTAAGTTGATGAATGCA+AGG + chr2_2:66015582-66015601 None:intergenic 35.0%
AGTTGATCTTAACACTGTAG+TGG - chr2_2:66015609-66015628 Msa0265660:intron 35.0%
AGTTTCATTGATCAAGTGTC+AGG - chr2_2:66015632-66015651 Msa0265660:intron 35.0%
TCGTAAAGAATGGGTGTAAA+AGG + chr2_2:66015667-66015686 None:intergenic 35.0%
! TGTCATTTAGACATCCCTAT+GGG + chr2_2:66015761-66015780 None:intergenic 35.0%
! ATGTCATTTAGACATCCCTA+TGG + chr2_2:66015762-66015781 None:intergenic 35.0%
CTAAATGACATGAAGCTATG+TGG - chr2_2:66015771-66015790 Msa0265660:intron 35.0%
TTCAAAGTATATCCTGGGAA+TGG - chr2_2:66015870-66015889 Msa0265660:intron 35.0%
GTAACATCCCACTTCTAAAT+AGG - chr2_2:66015972-66015991 Msa0265660:intron 35.0%
GAATAAAGTGACAACGTATG+AGG + chr2_2:66016231-66016250 None:intergenic 35.0%
!! ATTTAGCTTGGCATTAAGTC+GGG + chr2_2:66016899-66016918 None:intergenic 35.0%
!! CATTTAGCTTGGCATTAAGT+CGG + chr2_2:66016900-66016919 None:intergenic 35.0%
GAACCTGAAATAACAATGTC+AGG + chr2_2:66016997-66017016 None:intergenic 35.0%
!! TTCAAATAAATGGGTTGGGT+GGG + chr2_2:66017164-66017183 None:intergenic 35.0%
!! ATTCAAATAAATGGGTTGGG+TGG + chr2_2:66017165-66017184 None:intergenic 35.0%
! TTTAATGGAGGGAGATTTTC+TGG - chr2_2:66017254-66017273 Msa0265660:intron 35.0%
TCAACTATCTGAGTTGTTGA+AGG - chr2_2:66017623-66017642 Msa0265660:CDS 35.0%
!! AGTTGTTGAAGGTTTTGTGT+AGG - chr2_2:66017634-66017653 Msa0265660:CDS 35.0%
! CTCATTTCTTTTGCTACATC+TGG - chr2_2:66017807-66017826 Msa0265660:intron 35.0%
CAAAATTCATCAGACATCCA+AGG + chr2_2:66017852-66017871 None:intergenic 35.0%
! CTTGGATGTCTGATGAATTT+TGG - chr2_2:66017850-66017869 Msa0265660:intron 35.0%
ACAAGCTTGGTACTAGATAT+AGG - chr2_2:66018357-66018376 Msa0265660:intron 35.0%
!! TGGGTCTTCAAGTTGATAAA+TGG - chr2_2:66018387-66018406 Msa0265660:intron 35.0%
!! GGGTCTTCAAGTTGATAAAT+GGG - chr2_2:66018388-66018407 Msa0265660:intron 35.0%
! GTACACTGATGCAATAGTTT+TGG + chr2_2:66018461-66018480 None:intergenic 35.0%
TATTTATGCAGAGCTCTCAA+GGG - chr2_2:66018567-66018586 Msa0265660:intron 35.0%
TAGTTCTTACCTTCCAAATG+CGG - chr2_2:66018596-66018615 Msa0265660:intron 35.0%
AATAGTAATCCGCATTTGGA+AGG + chr2_2:66018608-66018627 None:intergenic 35.0%
GGATATGATCTACTTCATGA+TGG + chr2_2:66018648-66018667 None:intergenic 35.0%
TGCTTAATTGAAGAAGGTTG+AGG - chr2_2:66018685-66018704 Msa0265660:intron 35.0%
TTCACTGAGAATGAGATCAA+AGG - chr2_2:66018925-66018944 Msa0265660:CDS 35.0%
TCACTGAGAATGAGATCAAA+GGG - chr2_2:66018926-66018945 Msa0265660:CDS 35.0%
!!! TTTGCATTTTTTTTCCCTCC+AGG - chr2_2:66019055-66019074 Msa0265660:CDS 35.0%
TATTAAGTCATTAAGGGGGT+TGG - chr2_2:66019087-66019106 Msa0265660:CDS 35.0%
ATTAAGTCATTAAGGGGGTT+GGG - chr2_2:66019088-66019107 Msa0265660:CDS 35.0%
TGTATAGATGGATCCATGTT+TGG - chr2_2:66019130-66019149 Msa0265660:CDS 35.0%
TGGAATGCTGCATCTATATT+TGG - chr2_2:66019168-66019187 Msa0265660:CDS 35.0%
AGAGAGTAGAGAGAGCAAAA+CGG + chr2_2:66012855-66012874 None:intergenic 40.0%
TTTGGGAATTGAAGTTGTGG+TGG + chr2_2:66012911-66012930 None:intergenic 40.0%
!!! GGTTTTGGGAATTGAAGTTG+TGG + chr2_2:66012914-66012933 None:intergenic 40.0%
!! AATTGGAGGTGTTAGGGTTT+GGG + chr2_2:66012936-66012955 None:intergenic 40.0%
GCGTTTAGGGAAATAGGAAT+TGG + chr2_2:66012953-66012972 None:intergenic 40.0%
! ACCTTTGCCTTTAAAAGCGA+GGG + chr2_2:66013004-66013023 None:intergenic 40.0%
GCATCAACAACATCAAAAGG+AGG + chr2_2:66013156-66013175 None:intergenic 40.0%
CAATGCGGAACATAAACACA+AGG + chr2_2:66013180-66013199 None:intergenic 40.0%
TGTGTTTATGTTCCGCATTG+TGG - chr2_2:66013180-66013199 Msa0265660:three_prime_UTR 40.0%
TGGTTGTAAGACGCAGAATT+TGG - chr2_2:66013203-66013222 Msa0265660:three_prime_UTR 40.0%
GGCTCAGATTAAAGCTAAAG+AGG - chr2_2:66013233-66013252 Msa0265660:three_prime_UTR 40.0%
!!! AAGCTGCTGTTTTCAGCTTA+TGG - chr2_2:66013436-66013455 Msa0265660:intron 40.0%
!!! AGCTGCTGTTTTCAGCTTAT+GGG - chr2_2:66013437-66013456 Msa0265660:intron 40.0%
ATATAAACAGGTCCGTGACT+TGG - chr2_2:66013870-66013889 Msa0265660:intron 40.0%
CAACATGTATGACCAAGTCA+CGG + chr2_2:66013885-66013904 None:intergenic 40.0%
ACTTGGTCATACATGTTGGA+AGG - chr2_2:66013887-66013906 Msa0265660:intron 40.0%
CACGAAAGAAATGTTGATGC+TGG - chr2_2:66014243-66014262 Msa0265660:CDS 40.0%
GGGAGTGAAAATTATGCACT+TGG - chr2_2:66014264-66014283 Msa0265660:CDS 40.0%
AACATCTGAACAGGTTCTTG+CGG - chr2_2:66014487-66014506 Msa0265660:CDS 40.0%
TTGCGGCTATACAAGAATGT+TGG - chr2_2:66014504-66014523 Msa0265660:intron 40.0%
AAGCATTTGATGCTGAGAAG+TGG - chr2_2:66014584-66014603 Msa0265660:intron 40.0%
ATTTGATGCTGAGAAGTGGA+AGG - chr2_2:66014588-66014607 Msa0265660:intron 40.0%
TCGCACATTGGATAGTGATA+TGG + chr2_2:66014781-66014800 None:intergenic 40.0%
TGACCTAGGTGACTCAATTA+CGG - chr2_2:66014850-66014869 Msa0265660:intron 40.0%
! AAAGCTGGCTTATATGGTGA+TGG - chr2_2:66014952-66014971 Msa0265660:CDS 40.0%
CCATATCACTATGCAATGTG+GGG - chr2_2:66015004-66015023 Msa0265660:CDS 40.0%
!! TGTTCTAGGGATGTAATGAC+TGG - chr2_2:66015324-66015343 Msa0265660:intron 40.0%
TACTAGGACCTTCAGCAAAT+CGG + chr2_2:66015394-66015413 None:intergenic 40.0%
ACTTAAGTACCAACCACTTC+GGG + chr2_2:66015435-66015454 None:intergenic 40.0%
ACATGTGAAGAAGCTAAAGC+AGG + chr2_2:66015486-66015505 None:intergenic 40.0%
CAAAAAGGCTATAGCCCATA+GGG - chr2_2:66015744-66015763 Msa0265660:intron 40.0%
TAACAGATTCGGGATGTTAC+AGG + chr2_2:66015898-66015917 None:intergenic 40.0%
! TTTAAGGTATACCAAGGGGA+TGG - chr2_2:66015944-66015963 Msa0265660:intron 40.0%
ATCCCACTTCTAAATAGGGA+GGG - chr2_2:66015977-66015996 Msa0265660:intron 40.0%
! TAGTTTGTCTAGAAGACGCT+TGG - chr2_2:66016040-66016059 Msa0265660:intron 40.0%
TTTATGGATGGGTGAACTTC+AGG - chr2_2:66016131-66016150 Msa0265660:intron 40.0%
CACACAAAAAGAGACAGTTG+GGG + chr2_2:66016263-66016282 None:intergenic 40.0%
GCACACAAAAAGAGACAGTT+GGG + chr2_2:66016264-66016283 None:intergenic 40.0%
CATGCAGAGAAGGAATTTAC+TGG + chr2_2:66016345-66016364 None:intergenic 40.0%
TCCTTCTCTGCATGAATGAT+AGG - chr2_2:66016351-66016370 Msa0265660:intron 40.0%
ACCTATCATTCATGCAGAGA+AGG + chr2_2:66016355-66016374 None:intergenic 40.0%
!! TCTGTTGGTAACACATCTGT+TGG - chr2_2:66016400-66016419 Msa0265660:intron 40.0%
!! CTGTTGGTAACACATCTGTT+GGG - chr2_2:66016401-66016420 Msa0265660:intron 40.0%
!! TGTTGGTAACACATCTGTTG+GGG - chr2_2:66016402-66016421 Msa0265660:intron 40.0%
AGGAGGAATACACTTTGCAT+GGG - chr2_2:66016425-66016444 Msa0265660:intron 40.0%
AGCATTACAGAGACCTTAAG+AGG - chr2_2:66016454-66016473 Msa0265660:intron 40.0%
GCATTACAGAGACCTTAAGA+GGG - chr2_2:66016455-66016474 Msa0265660:intron 40.0%
TTGGAATGTAAGCCCTCTTA+AGG + chr2_2:66016470-66016489 None:intergenic 40.0%
AAACTCATCGAAGAATGTGC+TGG - chr2_2:66016658-66016677 Msa0265660:intron 40.0%
! TTTTGCAAGTGTCAGACCTA+TGG + chr2_2:66016737-66016756 None:intergenic 40.0%
TAGGTCTGACACTTGCAAAA+AGG - chr2_2:66016737-66016756 Msa0265660:intron 40.0%
CGACTTAATGCCAAGCTAAA+TGG - chr2_2:66016898-66016917 Msa0265660:intron 40.0%
GGGAAAGAAGTGAACAACAA+TGG + chr2_2:66017141-66017160 None:intergenic 40.0%
!! TCAAATAAATGGGTTGGGTG+GGG + chr2_2:66017163-66017182 None:intergenic 40.0%
CATGAAACATACACTATGCG+AGG + chr2_2:66017507-66017526 None:intergenic 40.0%
GACCTTGATTATCTCTGTCA+TGG - chr2_2:66017549-66017568 Msa0265660:intron 40.0%
CACCATGACAGAGATAATCA+AGG + chr2_2:66017554-66017573 None:intergenic 40.0%
TGATTATCTCTGTCATGGTG+TGG - chr2_2:66017554-66017573 Msa0265660:intron 40.0%
TAGGCAGAGCTGAATATAGA+AGG - chr2_2:66017653-66017672 Msa0265660:CDS 40.0%
TGCCCAACCTTGAAATGTAA+AGG + chr2_2:66017783-66017802 None:intergenic 40.0%
CTACTTTGCAGTTTGAACCT+TGG - chr2_2:66017832-66017851 Msa0265660:intron 40.0%
ATCAATGGATAACTGCACTC+TGG - chr2_2:66017996-66018015 Msa0265660:intron 40.0%
AATAGAAACACAGGGCAAGA+GGG + chr2_2:66018095-66018114 None:intergenic 40.0%
GGATGCTGAATAGAAACACA+GGG + chr2_2:66018103-66018122 None:intergenic 40.0%
TGGATGCTGAATAGAAACAC+AGG + chr2_2:66018104-66018123 None:intergenic 40.0%
GCACACAAACAATACAACTG+TGG + chr2_2:66018268-66018287 None:intergenic 40.0%
!! CTGTTTCTGCTATGTCTTTC+AGG - chr2_2:66018329-66018348 Msa0265660:intron 40.0%
CTTTCAGGAGATAACAAGCT+TGG - chr2_2:66018344-66018363 Msa0265660:intron 40.0%
!!! CTGATGCAATAGTTTTGGGT+GGG + chr2_2:66018456-66018475 None:intergenic 40.0%
!!! ACTGATGCAATAGTTTTGGG+TGG + chr2_2:66018457-66018476 None:intergenic 40.0%
CTATTTATGCAGAGCTCTCA+AGG - chr2_2:66018566-66018585 Msa0265660:intron 40.0%
AGCAAGAATCTGACAAGTGT+AGG + chr2_2:66018669-66018688 None:intergenic 40.0%
TGCATGAAACTTCAGATGCT+TGG - chr2_2:66018714-66018733 Msa0265660:intron 40.0%
CACTGAGAATGAGATCAAAG+GGG - chr2_2:66018927-66018946 Msa0265660:CDS 40.0%
GGAATTGAAGTTGTGGTGGT+TGG + chr2_2:66012907-66012926 None:intergenic 45.0%
!! GTGTTAGGGTTTGGGGTTTT+GGG + chr2_2:66012928-66012947 None:intergenic 45.0%
!! ATTGGAGGTGTTAGGGTTTG+GGG + chr2_2:66012935-66012954 None:intergenic 45.0%
!! GAATTGGAGGTGTTAGGGTT+TGG + chr2_2:66012937-66012956 None:intergenic 45.0%
!! TGCGAATCCCTCGCTTTTAA+AGG - chr2_2:66012994-66013013 Msa0265660:three_prime_UTR 45.0%
!! TCCCTCGCTTTTAAAGGCAA+AGG - chr2_2:66013000-66013019 Msa0265660:three_prime_UTR 45.0%
! GACCTTTGCCTTTAAAAGCG+AGG + chr2_2:66013005-66013024 None:intergenic 45.0%
GTCACACATGACGACAAAAC+CGG + chr2_2:66013046-66013065 None:intergenic 45.0%
TTCCCGGTGAACGTTTCATT+GGG - chr2_2:66013073-66013092 Msa0265660:three_prime_UTR 45.0%
TGGGAGGATTACTCGAAAGA+AGG - chr2_2:66013092-66013111 Msa0265660:three_prime_UTR 45.0%
GGGAGGATTACTCGAAAGAA+GGG - chr2_2:66013093-66013112 Msa0265660:three_prime_UTR 45.0%
GGAGGATTACTCGAAAGAAG+GGG - chr2_2:66013094-66013113 Msa0265660:three_prime_UTR 45.0%
TCGAAAGAAGGGGAATTACG+CGG - chr2_2:66013104-66013123 Msa0265660:three_prime_UTR 45.0%
GGCGCATCAACAACATCAAA+AGG + chr2_2:66013159-66013178 None:intergenic 45.0%
GTTTATGTTCCGCATTGTGG+TGG - chr2_2:66013183-66013202 Msa0265660:three_prime_UTR 45.0%
GTCTTACAACCACCACAATG+CGG + chr2_2:66013195-66013214 None:intergenic 45.0%
! GACGCAGAATTTGGCTTATC+AGG - chr2_2:66013212-66013231 Msa0265660:three_prime_UTR 45.0%
GTGTTTGTGACACTGTTTGG+AGG - chr2_2:66013500-66013519 Msa0265660:intron 45.0%
! TATAGCACAAGAGCGCATCA+TGG + chr2_2:66013664-66013683 None:intergenic 45.0%
!! CGTGACTTGGTCATACATGT+TGG - chr2_2:66013883-66013902 Msa0265660:intron 45.0%
AGGGTGAGAAACCAAGTTGT+GGG + chr2_2:66014535-66014554 None:intergenic 45.0%
TAGGGTGAGAAACCAAGTTG+TGG + chr2_2:66014536-66014555 None:intergenic 45.0%
TAGGCTCGACCCAAATTCTA+TGG + chr2_2:66014695-66014714 None:intergenic 45.0%
GCATTTCCCACCTTATAAGG+TGG + chr2_2:66014733-66014752 None:intergenic 45.0%
TCGGCATTTCCCACCTTATA+AGG + chr2_2:66014736-66014755 None:intergenic 45.0%
GACCTAGGTGACTCAATTAC+GGG - chr2_2:66014851-66014870 Msa0265660:intron 45.0%
! CCATATAAGCCAGCTTTGTG+CGG + chr2_2:66014949-66014968 None:intergenic 45.0%
CCCCACATTGCATAGTGATA+TGG + chr2_2:66015007-66015026 None:intergenic 45.0%
! TTTGAGCCTTATCCGGTGTA+TGG + chr2_2:66015032-66015051 None:intergenic 45.0%
!! TTTTAACTCGGGCAAAGGTG+TGG - chr2_2:66015080-66015099 Msa0265660:CDS 45.0%
! TTTAACTCGGGCAAAGGTGT+GGG - chr2_2:66015081-66015100 Msa0265660:CDS 45.0%
ACTAGGACCTTCAGCAAATC+GGG + chr2_2:66015393-66015412 None:intergenic 45.0%
AGTTTCTGCATTTCCCGAAG+TGG - chr2_2:66015419-66015438 Msa0265660:intron 45.0%
!! CCTATGGGCTATAGCCTTTT+TGG + chr2_2:66015746-66015765 None:intergenic 45.0%
CCAAAAAGGCTATAGCCCAT+AGG - chr2_2:66015743-66015762 Msa0265660:intron 45.0%
ATGTTACAGGATCCATTCCC+AGG + chr2_2:66015885-66015904 None:intergenic 45.0%
TGTTACAGAATCCATCCCCT+TGG + chr2_2:66015958-66015977 None:intergenic 45.0%
CATCCCACTTCTAAATAGGG+AGG - chr2_2:66015976-66015995 Msa0265660:intron 45.0%
TCCCACTTCTAAATAGGGAG+GGG - chr2_2:66015978-66015997 Msa0265660:intron 45.0%
TCCCCTCCCTATTTAGAAGT+GGG + chr2_2:66015982-66016001 None:intergenic 45.0%
ATCCCCTCCCTATTTAGAAG+TGG + chr2_2:66015983-66016002 None:intergenic 45.0%
ACTTCTAAATAGGGAGGGGA+TGG - chr2_2:66015982-66016001 Msa0265660:intron 45.0%
CGCACACAAAAAGAGACAGT+TGG + chr2_2:66016265-66016284 None:intergenic 45.0%
! ACTGTCTCTTTTTGTGTGCG+TGG - chr2_2:66016265-66016284 Msa0265660:intron 45.0%
GAGGAGGAATACACTTTGCA+TGG - chr2_2:66016424-66016443 Msa0265660:intron 45.0%
! GTTGTCCTTGACCTGTTTTG+TGG - chr2_2:66016703-66016722 Msa0265660:intron 45.0%
CTGTTCCACAAAACAGGTCA+AGG + chr2_2:66016711-66016730 None:intergenic 45.0%
! CTTGACCTGTTTTGTGGAAC+AGG - chr2_2:66016709-66016728 Msa0265660:intron 45.0%
! TTTTGTGGAACAGGCACCAT+AGG - chr2_2:66016718-66016737 Msa0265660:intron 45.0%
!! AAATAAATGGGTTGGGTGGG+GGG + chr2_2:66017161-66017180 None:intergenic 45.0%
!! CAAATAAATGGGTTGGGTGG+GGG + chr2_2:66017162-66017181 None:intergenic 45.0%
ACTCGATATGAGGTGTGTGT+GGG + chr2_2:66017718-66017737 None:intergenic 45.0%
AGGCAAACACACTCGATATG+AGG + chr2_2:66017728-66017747 None:intergenic 45.0%
TATCGAGTGTGTTTGCCTTC+TGG - chr2_2:66017730-66017749 Msa0265660:CDS 45.0%
CAGATCAACAAAGCTCCAGA+AGG + chr2_2:66017748-66017767 None:intergenic 45.0%
GAATAGAAACACAGGGCAAG+AGG + chr2_2:66018096-66018115 None:intergenic 45.0%
!! TAGCATTGGCAAAGCATGCA+TGG - chr2_2:66018501-66018520 Msa0265660:intron 45.0%
! ATTAAGTGCTGCTGTCATGC+CGG - chr2_2:66018827-66018846 Msa0265660:CDS 45.0%
!! AAAGGGGTACTAGCTCAAAC+CGG - chr2_2:66018943-66018962 Msa0265660:CDS 45.0%
GTAAGAGTCATGTCTGCTTC+CGG + chr2_2:66018965-66018984 None:intergenic 45.0%
TCATTAAGGGGGTTGGGATT+TGG - chr2_2:66019094-66019113 Msa0265660:CDS 45.0%
CATTAAGGGGGTTGGGATTT+GGG - chr2_2:66019095-66019114 Msa0265660:CDS 45.0%
TCCATGTTTGGTAGAAGAGC+TGG - chr2_2:66019142-66019161 Msa0265660:CDS 45.0%
CCATGTTTGGTAGAAGAGCT+GGG - chr2_2:66019143-66019162 Msa0265660:CDS 45.0%
! GGAGTGGGAGTGTGTTTGTT+AGG + chr2_2:66012795-66012814 None:intergenic 50.0%
GAGAGAGCAAAACGGTGAGA+GGG + chr2_2:66012847-66012866 None:intergenic 50.0%
AGAGAGAGCAAAACGGTGAG+AGG + chr2_2:66012848-66012867 None:intergenic 50.0%
!! TTGGTTCTGGTTGTGGTTCG+GGG + chr2_2:66012888-66012907 None:intergenic 50.0%
!! GTTGGTTCTGGTTGTGGTTC+GGG + chr2_2:66012889-66012908 None:intergenic 50.0%
!! GGTTGGTTCTGGTTGTGGTT+CGG + chr2_2:66012890-66012909 None:intergenic 50.0%
! GAAGTTGTGGTGGTTGGTTC+TGG + chr2_2:66012901-66012920 None:intergenic 50.0%
!! GGTGTTAGGGTTTGGGGTTT+TGG + chr2_2:66012929-66012948 None:intergenic 50.0%
TTGGCCGCGTTTAGGGAAAT+AGG + chr2_2:66012959-66012978 None:intergenic 50.0%
GGATTCGCAGAGTAGTTCGA+GGG + chr2_2:66012983-66013002 None:intergenic 50.0%
CTTCCCGGTGAACGTTTCAT+TGG - chr2_2:66013072-66013091 Msa0265660:three_prime_UTR 50.0%
CTCCCAATGAAACGTTCACC+GGG + chr2_2:66013078-66013097 None:intergenic 50.0%
CCTCCCAATGAAACGTTCAC+CGG + chr2_2:66013079-66013098 None:intergenic 50.0%
AAAGAAGGGGAATTACGCGG+AGG - chr2_2:66013107-66013126 Msa0265660:three_prime_UTR 50.0%
GAATTACGCGGAGGCTACTA+AGG - chr2_2:66013116-66013135 Msa0265660:three_prime_UTR 50.0%
CTTTCGTGCAGCGACTCTTT+AGG + chr2_2:66014231-66014250 None:intergenic 50.0%
GCACTTGGATTGCATGTTCC+TGG - chr2_2:66014279-66014298 Msa0265660:CDS 50.0%
TGTTGGAGAGACCCACAACT+TGG - chr2_2:66014521-66014540 Msa0265660:intron 50.0%
! GTGTGTTGAGTGTCGCACAT+TGG + chr2_2:66014793-66014812 None:intergenic 50.0%
CACCCGTAATTGAGTCACCT+AGG + chr2_2:66014856-66014875 None:intergenic 50.0%
GTGCGGTTGAGTTAGGCATT+AGG + chr2_2:66014932-66014951 None:intergenic 50.0%
! CAGCTTTGTGCGGTTGAGTT+AGG + chr2_2:66014939-66014958 None:intergenic 50.0%
CTAACTCAACCGCACAAAGC+TGG - chr2_2:66014937-66014956 Msa0265660:intron 50.0%
! CCGCACAAAGCTGGCTTATA+TGG - chr2_2:66014946-66014965 Msa0265660:intron 50.0%
CAATGTGGGGTTCCATACAC+CGG - chr2_2:66015017-66015036 Msa0265660:CDS 50.0%
!! GACTGGTCTGCCTGAAGTAA+TGG - chr2_2:66015341-66015360 Msa0265660:intron 50.0%
CAAATCGGGCTTGTAGGAAG+AGG + chr2_2:66015379-66015398 None:intergenic 50.0%
CTTCAGCAAATCGGGCTTGT+AGG + chr2_2:66015385-66015404 None:intergenic 50.0%
!! CTACAAGCCCGATTTGCTGA+AGG - chr2_2:66015383-66015402 Msa0265660:intron 50.0%
TCTGCATTTCCCGAAGTGGT+TGG - chr2_2:66015423-66015442 Msa0265660:intron 50.0%
!!! CTTTTTGGCTTGGAGCATGG+AGG + chr2_2:66015731-66015750 None:intergenic 50.0%
CTCCATGCTCCAAGCCAAAA+AGG - chr2_2:66015729-66015748 Msa0265660:intron 50.0%
!!! AGCCTTTTTGGCTTGGAGCA+TGG + chr2_2:66015734-66015753 None:intergenic 50.0%
!!! GGGCTATAGCCTTTTTGGCT+TGG + chr2_2:66015741-66015760 None:intergenic 50.0%
TGGTAACACATCTGTTGGGG+AGG - chr2_2:66016405-66016424 Msa0265660:intron 50.0%
TAACACATCTGTTGGGGAGG+AGG - chr2_2:66016408-66016427 Msa0265660:intron 50.0%
! GAAGAATGTGCTGGCATCAG+AGG - chr2_2:66016667-66016686 Msa0265660:intron 50.0%
TGGTGCCTGTTCCACAAAAC+AGG + chr2_2:66016717-66016736 None:intergenic 50.0%
ATTAAGTCGGGCATCTGCGA+TGG + chr2_2:66016887-66016906 None:intergenic 50.0%
TCAGCTTCATGTGCATCCCT+GGG + chr2_2:66017458-66017477 None:intergenic 50.0%
ATCAGCTTCATGTGCATCCC+TGG + chr2_2:66017459-66017478 None:intergenic 50.0%
! GAGGCGCCCTAAGATTTAAG+AGG + chr2_2:66017488-66017507 None:intergenic 50.0%
GGAACATGTCAACTGGCTGT+AGG + chr2_2:66017697-66017716 None:intergenic 50.0%
GTGTGTGGGAACATGTCAAC+TGG + chr2_2:66017704-66017723 None:intergenic 50.0%
CACTCGATATGAGGTGTGTG+TGG + chr2_2:66017719-66017738 None:intergenic 50.0%
ATGCTTTCACGCTGCAAGGT+TGG - chr2_2:66018418-66018437 Msa0265660:intron 50.0%
TATGCAGAGCTCTCAAGGGT+TGG - chr2_2:66018571-66018590 Msa0265660:intron 50.0%
! TTAAGTGCTGCTGTCATGCC+GGG - chr2_2:66018828-66018847 Msa0265660:CDS 50.0%
CCCAGCTCTTCTACCAAACA+TGG + chr2_2:66019146-66019165 None:intergenic 50.0%
TTTGGTAGAAGAGCTGGGTC+TGG - chr2_2:66019148-66019167 Msa0265660:CDS 50.0%
AACGGTGAGAGGGAGAGGAT+GGG + chr2_2:66012837-66012856 None:intergenic 55.0%
AAACGGTGAGAGGGAGAGGA+TGG + chr2_2:66012838-66012857 None:intergenic 55.0%
AGCAAAACGGTGAGAGGGAG+AGG + chr2_2:66012842-66012861 None:intergenic 55.0%
! TTCTGGTTGTGGTTCGGGGA+GGG + chr2_2:66012884-66012903 None:intergenic 55.0%
!! GTGGTGGTTGGTTCTGGTTG+TGG + chr2_2:66012895-66012914 None:intergenic 55.0%
CGCAGAGTAGTTCGAGGGTT+TGG + chr2_2:66012978-66012997 None:intergenic 55.0%
GGGATTCGCAGAGTAGTTCG+AGG + chr2_2:66012984-66013003 None:intergenic 55.0%
ATGTGTGACCGTGCACTTCC+CGG - chr2_2:66013057-66013076 Msa0265660:three_prime_UTR 55.0%
! AACGTTCACCGGGAAGTGCA+CGG + chr2_2:66013068-66013087 None:intergenic 55.0%
CCGGTGAACGTTTCATTGGG+AGG - chr2_2:66013076-66013095 Msa0265660:three_prime_UTR 55.0%
CACCTAGGTCACACTCAAGC+CGG + chr2_2:66014841-66014860 None:intergenic 55.0%
GGGGTTCCATACACCGGATA+AGG - chr2_2:66015023-66015042 Msa0265660:CDS 55.0%
ATAGGGAGGGGATGGAACTG+AGG - chr2_2:66015990-66016009 Msa0265660:intron 55.0%
! TGTGCTGGCATCAGAGGAGA+TGG - chr2_2:66016673-66016692 Msa0265660:intron 55.0%
TGGGCGGTTGGGATCTGTAT+TGG + chr2_2:66017439-66017458 None:intergenic 55.0%
AATACAGATCCCAACCGCCC+AGG - chr2_2:66017438-66017457 Msa0265660:CDS 55.0%
ATACAGATCCCAACCGCCCA+GGG - chr2_2:66017439-66017458 Msa0265660:CDS 55.0%
AGGTCACGTGCACATGTAGC+AGG + chr2_2:66017534-66017553 None:intergenic 55.0%
GCACATGCTTTCACGCTGCA+AGG - chr2_2:66018414-66018433 Msa0265660:intron 55.0%
! TAAGTGCTGCTGTCATGCCG+GGG - chr2_2:66018829-66018848 Msa0265660:CDS 55.0%
! GTTCTGGTTGTGGTTCGGGG+AGG + chr2_2:66012885-66012904 None:intergenic 60.0%
CGAGGGTTTGGCCGCGTTTA+GGG + chr2_2:66012966-66012985 None:intergenic 60.0%
TCGAGGGTTTGGCCGCGTTT+AGG + chr2_2:66012967-66012986 None:intergenic 60.0%
AACACACACCTCAGACGCCC+AGG - chr2_2:66014806-66014825 Msa0265660:intron 60.0%
ACACACACCTCAGACGCCCA+GGG - chr2_2:66014807-66014826 Msa0265660:intron 60.0%
TATTCCTCCCTGGGCGTCTG+AGG + chr2_2:66014817-66014836 None:intergenic 60.0%
CAAGCCGGCTATTCCTCCCT+GGG + chr2_2:66014826-66014845 None:intergenic 60.0%
TCAAGCCGGCTATTCCTCCC+TGG + chr2_2:66014827-66014846 None:intergenic 60.0%
!! AGCCGGCTTGAGTGTGACCT+AGG - chr2_2:66014836-66014855 Msa0265660:intron 60.0%
ATGTGCATCCCTGGGCGGTT+GGG + chr2_2:66017450-66017469 None:intergenic 60.0%
GCTTCATGTGCATCCCTGGG+CGG + chr2_2:66017455-66017474 None:intergenic 60.0%
GACGCCCAGGGAGGAATAGC+CGG - chr2_2:66014819-66014838 Msa0265660:intron 65.0%
CGGGCATCTGCGATGGCTTG+AGG + chr2_2:66016880-66016899 None:intergenic 65.0%
CATGTGCATCCCTGGGCGGT+TGG + chr2_2:66017451-66017470 None:intergenic 65.0%
CACACCTCAGACGCCCAGGG+AGG - chr2_2:66014810-66014829 Msa0265660:intron 70.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 66012772 66019191 66012772 ID=Msa0265660;Name=Msa0265660
chr2_2 mRNA 66012772 66019191 66012772 ID=Msa0265660-mRNA-1;Parent=Msa0265660;Name=Msa0265660-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0.9|0.90|1|0.7|0.81|11|730|476
chr2_2 exon 66012772 66013385 66012772 ID=Msa0265660-mRNA-1:exon:20873;Parent=Msa0265660-mRNA-1
chr2_2 exon 66013528 66013612 66013528 ID=Msa0265660-mRNA-1:exon:20872;Parent=Msa0265660-mRNA-1
chr2_2 exon 66014169 66014307 66014169 ID=Msa0265660-mRNA-1:exon:20871;Parent=Msa0265660-mRNA-1
chr2_2 exon 66014388 66014518 66014388 ID=Msa0265660-mRNA-1:exon:20870;Parent=Msa0265660-mRNA-1
chr2_2 exon 66014951 66015117 66014951 ID=Msa0265660-mRNA-1:exon:20869;Parent=Msa0265660-mRNA-1
chr2_2 exon 66015205 66015320 66015205 ID=Msa0265660-mRNA-1:exon:20868;Parent=Msa0265660-mRNA-1
chr2_2 exon 66015435 66015590 66015435 ID=Msa0265660-mRNA-1:exon:20867;Parent=Msa0265660-mRNA-1
chr2_2 exon 66016523 66016631 66016523 ID=Msa0265660-mRNA-1:exon:20866;Parent=Msa0265660-mRNA-1
chr2_2 exon 66017354 66017463 66017354 ID=Msa0265660-mRNA-1:exon:20865;Parent=Msa0265660-mRNA-1
chr2_2 exon 66017601 66017768 66017601 ID=Msa0265660-mRNA-1:exon:20864;Parent=Msa0265660-mRNA-1
chr2_2 exon 66018826 66019191 66018826 ID=Msa0265660-mRNA-1:exon:20863;Parent=Msa0265660-mRNA-1
chr2_2 CDS 66018826 66019191 66018826 ID=Msa0265660-mRNA-1:cds;Parent=Msa0265660-mRNA-1
chr2_2 CDS 66017601 66017768 66017601 ID=Msa0265660-mRNA-1:cds;Parent=Msa0265660-mRNA-1
chr2_2 CDS 66017354 66017463 66017354 ID=Msa0265660-mRNA-1:cds;Parent=Msa0265660-mRNA-1
chr2_2 CDS 66016523 66016631 66016523 ID=Msa0265660-mRNA-1:cds;Parent=Msa0265660-mRNA-1
chr2_2 CDS 66015435 66015590 66015435 ID=Msa0265660-mRNA-1:cds;Parent=Msa0265660-mRNA-1
chr2_2 CDS 66015205 66015320 66015205 ID=Msa0265660-mRNA-1:cds;Parent=Msa0265660-mRNA-1
chr2_2 CDS 66014951 66015117 66014951 ID=Msa0265660-mRNA-1:cds;Parent=Msa0265660-mRNA-1
chr2_2 CDS 66014388 66014518 66014388 ID=Msa0265660-mRNA-1:cds;Parent=Msa0265660-mRNA-1
chr2_2 CDS 66014200 66014307 66014200 ID=Msa0265660-mRNA-1:cds;Parent=Msa0265660-mRNA-1
chr2_2 three_prime_UTR 66014169 66014199 66014169 ID=Msa0265660-mRNA-1:three_prime_utr;Parent=Msa0265660-mRNA-1
chr2_2 three_prime_UTR 66013528 66013612 66013528 ID=Msa0265660-mRNA-1:three_prime_utr;Parent=Msa0265660-mRNA-1
chr2_2 three_prime_UTR 66012772 66013385 66012772 ID=Msa0265660-mRNA-1:three_prime_utr;Parent=Msa0265660-mRNA-1
Gene Sequence

>Msa0265660

ATGACAAGAACAATTTCAAACCTAACAAACACACTCCCACTCCATTTCCGAAAATTCAAATTCCCATCCTCTCCCTCTCACCGTTTTGCTCTCTCTACTCTCTCATGTTCCCTCCCCGAACCACAACCAGAACCAACCACCACAACTTCAATTCCCAAAACCCCAAACCCTAACACCTCCAATTCCTATTTCCCTAAACGCGGCCAAACCCTCGAACTACTCTGCGAATCCCTCGCTTTTAAAGGCAAAGGTCTATGCAAAGTTACTGATACCGGTTTTGTCGTCATGTGTGACCGTGCACTTCCCGGTGAACGTTTCATTGGGAGGATTACTCGAAAGAAGGGGAATTACGCGGAGGCTACTAAGATGGAATTCTCATTTGGTCCATATAAATGGTTGCCTAAAGAGTCGCTGCACGAAAGAAATGTTGATGCTGGGAGTGAAAATTATGCACTTGGATTGCATGTTCCTGGTTTTTTTGATAAAATTATAAATGTTGAAAAGTGCTTACTACAAACTGATCCTGCTAATAAGGTTCTTGCGGCTATACAAGAATGTTGGAGAGACCCACAACTTGGTTTCTCACCCTACAATGTTCATTCACACAAAGGATTTCTTAAGCATTTGATGCTGAGAAGTGGAAGGGATGTAATGACTGGTCTGCCTGAAGTAATGGTCAACTTTGTGACCTCTTCCTACAAGCCCGATTTGCTGAAGGTCCTAGTAGATAAAGTTTCTGCATTTCCCGAAGTGGTAAGCATCATGAATAATGTAAATACTTCTGTTGGTAACACATCTGTTGGGGAGGAGGAATACACTTTGCATGGGAAATCTAGCATTACAGAGACCTTAAGAGGGCTTACATTCCAAATATCAGCAAACTCTTTCTTTCAAACAAATACTCATCAGGCAGAAGTTTTGTATAAACTCATCGAAGAATGTGCTGGCATCAGAGGAGATGGCTCAGAAGTTGTCCTTGACCTGTTTTGTGGAACAGGCACCATAGGTCTGACACTTGCAAAAAGTGTAAAGCATGTTTATGGCTATGAAGTTGTTCCTCAAGCCATCGCAGATGCCCGACTTAATGCCAAGCTAAATGGCATACAAAATGCAACATTTATTGAGGGGGATCTTAATAAAATTGATGGAAATTTCGGGAAGAATTTTCCTAAACCTGACATTGTTATTTCAGATCCCAACCGCCCAGGGATGCACATGAAGCTGATCAAGTTCCTCTTAAATCTTAGGGCGCCTCGCATAGTGTATGTTTCATGCAATCCTGCTACATGTGCACGTGACCTTGATTATCTCTGTCATGGTGTGGCAGAGCTGAATATAGAAGGATGTTATAAGCTAACAAGCCTACAGCCAGTTGACATGTTCCCACACACACCTCATATCGAGTGTGTTTGCCTTCTGGAGCTTTGTTGA
Protein sequence

>Msa0265660

MTRTISNLTNTLPLHFRKFKFPSSPSHRFALSTLSCSLPEPQPEPTTTTSIPKTPNPNTSNSYFPKRGQTLELLCESLAFKGKGLCKVTDTGFVVMCDRALPGERFIGRITRKKGNYAEATKMEFSFGPYKWLPKESLHERNVDAGSENYALGLHVPGFFDKIINVEKCLLQTDPANKVLAAIQECWRDPQLGFSPYNVHSHKGFLKHLMLRSGRDVMTGLPEVMVNFVTSSYKPDLLKVLVDKVSAFPEVVSIMNNVNTSVGNTSVGEEEYTLHGKSSITETLRGLTFQISANSFFQTNTHQAEVLYKLIEECAGIRGDGSEVVLDLFCGTGTIGLTLAKSVKHVYGYEVVPQAIADARLNAKLNGIQNATFIEGDLNKIDGNFGKNFPKPDIVISDPNRPGMHMKLIKFLLNLRAPRIVYVSCNPATCARDLDYLCHGVAELNIEGCYKLTSLQPVDMFPHTPHIECVCLLELC*